+D GENES KO
#
KEGG Orthology (KO) - Yersinia enterocolitica subsp. enterocolitica 8081 (serotype 0:8)
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:yen00010]
D YE1225 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D YE3870 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D YE0089 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D YE0410 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D YE0098 glpX; putative fructose 1,6-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D YE3413 fbaA; fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D YE0093 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D YE2265 gapA; glyceraldehyde 3-phosphate dehydrogenase A K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D YE3414 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D YE2924 gpmA; phosphoglycerate mutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D YE0592 gpmB; putative phosphoglycerate mutase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D YE0077 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D YE0747 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D YE2385 pykA; pyruvate kinase II K00873 PK; pyruvate kinase [EC:2.7.1.40]
D YE2164 pykF; pyruvate kinase I K00873 PK; pyruvate kinase [EC:2.7.1.40]
D YE2176 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D YE0699 aceE; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D YE0701 aceF; dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D YE0131 putative pyridine nucleotide-disulphide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YE0702 lpdA; dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YE2102 nifJ; putative pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D YE2821 probable alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D YE2238 adhE; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D YE3722 Probable NADP-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D YE0309 acs; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D YE2920 galM; aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D YE1296 putative phosphatase K01085 agp; glucose-1-phosphatase [EC:3.1.3.10]
D YE0030 conserved hypothetical protein K20866 yihX; glucose-1-phosphatase [EC:3.1.3.10]
D YE2967 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D YE2269 conserved hypothetical protein K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15]
D YE3986 pckA; phosphoenolpyruvate carboxykinase [ATP] K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D YE3961 putative glycosyl hydrolase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D YE2103 arbB; beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D YE1257 ascB; putative 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D YE1417 bglA; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D YE1292 putative glycosyl hydrolase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D YE4099 bglA; Probable beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D YE0969 putative glycosyl hydrolase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D YE1205 crr; PTS system, glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D YE1643 ptsG; PTS system, glucose-specific IIBC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D YE2011 malX; PTS system, maltose and glucose-specific IIabc component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D YE1256 ascF; PTS transport protein K02753 ascF; beta-glucoside (arbutin/salicin/cellobiose) PTS system EIICB component [EC:2.7.1.-]
C 00020 Citrate cycle (TCA cycle) [PATH:yen00020]
D YE2949 gltA; citrate synthase GltA K01647 CS; citrate synthase [EC:2.3.3.1]
D YE1964 acnA; aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D YE0705 acnB; aconitate hydratase 2 K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D YE1725 icdA; isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D YE2944 sucA; 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D YE2943 sucB; dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D YE0131 putative pyridine nucleotide-disulphide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YE0702 lpdA; dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YE2941 sucD; succinyl-CoA synthetase alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D YE2942 sucC; succinyl-CoA synthetase beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D YE2946 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D YE2945 sdhB; succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D YE2948 sdhC; succinate dehydrogenase cytochrome b-556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D YE2947 sdhD; succinate dehydrogenase hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D YE0364 frdA; fumarate reductase flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D YE0363 frdB; fumarate reductase iron-sulfur protein K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D YE0362 frdC; fumarate reductase hydrophobic protein K00246 frdC; succinate dehydrogenase subunit C
D YE0361 frdD; fumarate reductase hydrophobic protein K00247 frdD; succinate dehydrogenase subunit D
D YE0816 fumA; fumarate hydratase, class I K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D YE4036 fumB; fumarate hydratase class I, anaerobic K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D YE2016 fumC; fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D YE0414 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D YE3986 pckA; phosphoenolpyruvate carboxykinase [ATP] K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D YE0699 aceE; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D YE0701 aceF; dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D YE2102 nifJ; putative pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
C 00030 Pentose phosphate pathway [PATH:yen00030]
D YE3870 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D YE2383 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D YE2909 conserved hypothetical protein K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]
D YE3778 putative exported protein K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]
D YE2773 gnd; 6-phosphogluconate dehydrogenase,decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D YE3971 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D YE3416 tktA; transketolase 1 K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D YE0822 putative N-terminal region of transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D YE0823 C-terminal region of transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D YE0604 talB; transaldolase B K00616 TALDO1; transaldolase [EC:2.2.1.2]
D YE3401 rpiA; ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D YE0570 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D YE1475 deoC; putative deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D YE2067 putative carbohydrate kinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D YE0012 rbsK; ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D YE0572 deoB; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D YE3104 metalloenzyme superfamily protein K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D YE2967 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D YE0470 phnN; PhnN protein K05774 phnN; ribose 1,5-bisphosphokinase [EC:2.7.4.23]
D YE2435 prsA; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D YE1368 edd; phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12]
D YE2382 eda; KHG/KDPG aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D YE1085 hypothetical protein K19813 gdh; glucose dehydrogenase [EC:1.1.5.9]
D YE4159 putative D-isomer specific 2-hydroxyacid dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D YE4020 putative gluconokinase K00851 idnK; gluconokinase [EC:2.7.1.12]
D YE1362 idnK; putative thermosensitive gluconokinase K00851 idnK; gluconokinase [EC:2.7.1.12]
D YE4065 kdgK; 2-dehydro-3-deoxygluconokinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D YE3413 fbaA; fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D YE0410 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D YE0098 glpX; putative fructose 1,6-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D YE0089 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:yen00040]
D YE0549 putative pectinesterase K01051 E3.1.1.11; pectinesterase [EC:3.1.1.11]
D YE4069 pelY; periplasmic pectate lyase precursor K01728 pel; pectate lyase [EC:4.2.2.2]
D YE1886 kdgC; exopolygalacturonate lyase K01731 pelW; pectate disaccharide-lyase [EC:4.2.2.9]
D YE1876 ogl; oligogalacturonate lyase K01730 ogl; oligogalacturonide lyase [EC:4.2.2.6]
D YE1889 kdgF; pectin degradation protein K26933 kdgF; unsaturated pyranuronate lyase [EC:4.2.99.25]
D YE1888 kduI; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase K01815 kduI; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [EC:5.3.1.17]
D YE1887 kduD1; 2-deoxy-D-gluconate 3-dehydrogenase K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127]
D YE3708 uxaC; uronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12]
D YE3707 uxaB; altronate oxidoreductase K00041 uxaB; tagaturonate reductase [EC:1.1.1.58]
D YE3706 uxaA; altronate hydrolase K01685 uxaA; altronate hydrolase [EC:4.2.1.7]
D YE1440 uxuA; mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8]
D YE1438 putative D-mannonate oxidoreductase K00040 uxuB; fructuronate reductase [EC:1.1.1.57]
D YE2242 putative nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D YE2777 galF; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D YE2778 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D YE1976 araD; L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D YE3971 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D YE2001 araA; L-arabinose isomerase K01804 araA; L-arabinose isomerase [EC:5.3.1.4]
D YE2002 araB; L-ribulokinase K00853 araB; L-ribulokinase [EC:2.7.1.16]
D YE4123 xylB; xylulose kinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D YE2603 putative sugar kinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D YE4122 xylA; xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
C 00051 Fructose and mannose metabolism [PATH:yen00051]
D YE0554 scrK; fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D YE3185 conserved hypothetical protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D YE4106 Hypothetical ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D YE2015 manA; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D YE4098 manA; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D YE3072 manB; phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D YE3073 manC; mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D YE3075 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D YE3074 wbcJ; GDP-fucose synthetase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D YE0089 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D YE0410 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D YE0098 glpX; putative fructose 1,6-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D YE4147 mtlD; mannitol-1-phosphate 5-dehydrogenase K00009 mtlD; mannitol-1-phosphate 5-dehydrogenase [EC:1.1.1.17]
D YE1095 gutD; sorbitol-6-phosphate 2-dehydrogenase K00068 srlD; sorbitol-6-phosphate 2-dehydrogenase [EC:1.1.1.140]
D YE0810 sorE; L-sorbose 1-phosphate reductase K19956 sorE; L-sorbose 1-phosphate reductase [EC:1.1.1.-]
D YE1448 fruK; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D YE4122 xylA; xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D YE3413 fbaA; fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D YE0093 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D YE1449 fruA; PTS system, fructose-specific IIBC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D YE1777 manX; PTS system, mannose-specific IIAB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D YE1776 manY; PTS system, mannose-specific IIC component K02795 manY; mannose PTS system EIIC component
D YE1775 manZ; PTS system, mannose-specific IID component K02796 manZ; mannose PTS system EIID component
D YE4148 mtlA; PTS system, mannitol-specific IIABC component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D YE1337 putative haloacid dehalogenase-like hydrolase K19270 hxpA; mannitol-1-/sugar-/sorbitol-6-phosphatase [EC:3.1.3.22 3.1.3.23 3.1.3.50]
D YE1890 conserved hypothetical protein K24204 hxpB; mannitol-1-/sugar-/sorbitol-6-/2-deoxyglucose-6-phosphatase [EC:3.1.3.22 3.1.3.23 3.1.3.50 3.1.3.68]
D YE1096 gutB; pts system, glucitol/sorbitol-specific iia component K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D YE1097 gutE; pts system, glucitol/sorbitol-specific iibc component K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D YE1098 gutA; pts system, glucitol/sorbitol-specific iic2 component K02783 srlA; glucitol/sorbitol PTS system EIIC component
D YE0814 sorF; sorbose-specific PTS uptake system component K02812 sorF; sorbose PTS system EIIA component [EC:2.7.1.206]
D YE0813 sorB; sorbose-specific PTS uptake system component K02813 sorB; sorbose PTS system EIIB component [EC:2.7.1.206]
D YE0812 sorA; sorbose-specific PTS uptake system component K02814 sorA; sorbose PTS system EIIC component
D YE0811 sorM; sorbose-specific PTS uptake system, component K02815 sorM; sorbose PTS system EIID component
C 00052 Galactose metabolism [PATH:yen00052]
D YE2920 galM; aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D YE2919 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D YE2918 galT; galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D YE3071 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D YE2917 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D YE2777 galF; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D YE2778 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D YE2967 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D YE1225 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D YE2592 lacZ; beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D YE0089 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D YE0551 scrB; sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D YE3359 putative glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D YE3177 malZ; putative maltodextrin glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
C 00053 Ascorbate and aldarate metabolism [PATH:yen00053]
D YE2242 putative nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D YE1330 phosphotransferase enzyme II, A component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D YE1329 phosphotransferase enzyme II, B component K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D YE1328 putative membrane protein K03475 ulaA; ascorbate PTS system EIIC component
D YE1976 araD; L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
C 00500 Starch and sucrose metabolism [PATH:yen00500]
D YE0552 scrA; PTSsystem, sucrose-specific IIbc component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D YE0551 scrB; sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D YE3359 putative glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D YE3177 malZ; putative maltodextrin glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D YE2777 galF; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D YE2778 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D YE4074 bcsA; cellulose synthase 1 catalytic subunit [UDP-forming] K00694 bcsA; cellulose synthase (UDP-forming) [EC:2.4.1.12]
D YE0970 celC; PTS system, cellobiose-specific IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D YE1291 putative PTS system protein K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D YE4105 Putative phosphotransferase protein K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D YE4103 pts system, cellobiose-specific IIb component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D YE0967 celA; PTS system, cellobiose-specific IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D YE1294 putative exported PTS system protein K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D YE4104 Putative phosphotransferase protein K02761 celB; cellobiose PTS system EIIC component
D YE0968 celB; PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D YE1293 putative PTS system protein K02761 celB; cellobiose PTS system EIIC component
D YE4102 Putative cellobiose-specific phosphotransferase K02761 celB; cellobiose PTS system EIIC component
D YE3961 putative glycosyl hydrolase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D YE2103 arbB; beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D YE1257 ascB; putative 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D YE1417 bglA; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D YE1292 putative glycosyl hydrolase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D YE4099 bglA; Probable beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D YE0969 putative glycosyl hydrolase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D YE3087 ddhA; glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D YE2601 glgC2; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D YE4011 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D YE4010 glgA; glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D YE4013 glgB; 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D YE3991 malP; phosphorylase (ec 2.4.1.1) K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D YE4009 glgP; glycogen phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D YE4012 glgX; putative alpha-amylase K02438 glgX; glycogen debranching enzyme [EC:3.2.1.196]
D YE1962 amyA; alpha-amylase K01176 AMY; alpha-amylase [EC:3.2.1.1]
D YE4160 malS; alpha-amylase protein K01176 AMY; alpha-amylase [EC:3.2.1.1]
D YE3992 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D YE1205 crr; PTS system, glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D YE2011 malX; PTS system, maltose and glucose-specific IIabc component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D YE3199 aglA; PTS system, alpha-glucoside-specific IIBC component K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-]
D YE3198 aglB; 6-phospho-alpha-glucosidase K01232 glvA; maltose-6'-phosphate glucosidase [EC:3.2.1.122]
D YE3774 treB; PTS system, trehalose-specific IIBC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D YE3773 treC; putative trehalose-6-phosphate hydrolase K01226 treC; trehalose-6-phosphate hydrolase [EC:3.2.1.93]
D YE2967 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D YE1225 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D YE3870 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D YE0554 scrK; fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D YE3185 conserved hypothetical protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D YE4106 Hypothetical ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:yen00520]
D YE1705 ycfO; beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D YE3687 glycosyl hydrolase family protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D YE2974 chb; chitobiase precursor K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D YE1205 crr; PTS system, glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D YE2978 nagE; pts system, N-acetylglucosamine-specific IIABC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D YE1713 conserved hypothetical protein K00884 NAGK; N-acetylglucosamine kinase [EC:2.7.1.59]
D YE2980 nagA; putative N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D YE2979 nagB; putative glucosamine-6-phosphate isomerase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D YE0554 scrK; fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D YE3185 conserved hypothetical protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D YE4106 Hypothetical ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D YE4203 glmS; glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D YE0430 mrsA; probable phosphoglucomutase/phosphomannomutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D YE4204 glmU; UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D YE3690 photransferase system, IIBC component K11192 murP; N-acetylmuramic acid PTS system EIICB component [EC:2.7.1.192]
D YE1027 putative glucokinase protein K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D YE3689 conserved hypothetical protein K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D YE2142 conserved hypothetical protein K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D YE3746 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D YE0274 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D YE1190 putative sugar kinase K00885 nanK; N-acylmannosamine kinase [EC:2.7.1.60]
D YE1189 conserved hypothetical protein K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9]
D YE1188 nanA; probable N-acetylneuraminate lyase K01639 E4.1.3.3; N-acetylneuraminate lyase [EC:4.1.3.3]
D YE0171 rffE; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D YE0172 rffD; putative UDP-glucose/GDP-mannose dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D YE2190 probable formyl transferase K10011 arnA; UDP-4-amino-4-deoxy-L-arabinose formyltransferase / UDP-glucuronic acid dehydrogenase (UDP-4-keto-hexauronic acid decarboxylating) [EC:2.1.2.13 1.1.1.305]
D YE2192 conserved hypothteical protein K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87]
D YE2191 pmrF; probable glycosyl transferase K10012 arnC; undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [EC:2.4.2.53]
D YE2189 conserved hypothetical protein K13014 arnD; undecaprenyl phosphate-alpha-L-ara4FN deformylase [EC:3.5.1.-]
D YE1643 ptsG; PTS system, glucose-specific IIBC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D YE2011 malX; PTS system, maltose and glucose-specific IIabc component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D YE1225 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D YE2967 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D YE2777 galF; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D YE2778 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D YE2242 putative nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D YE2919 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D YE2918 galT; galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D YE3071 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D YE2917 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D YE1777 manX; PTS system, mannose-specific IIAB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D YE1776 manY; PTS system, mannose-specific IIC component K02795 manY; mannose PTS system EIIC component
D YE1775 manZ; PTS system, mannose-specific IID component K02796 manZ; mannose PTS system EIID component
D YE3870 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D YE2015 manA; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D YE4098 manA; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D YE3072 manB; phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D YE3073 manC; mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D YE3075 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D YE3074 wbcJ; GDP-fucose synthetase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D YE3087 ddhA; glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D YE3086 ddhB; CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45]
D YE2601 glgC2; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D YE4011 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:yen00620]
D YE0309 acs; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D YE2102 nifJ; putative pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D YE0699 aceE; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D YE0701 aceF; dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D YE0131 putative pyridine nucleotide-disulphide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YE0702 lpdA; dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YE0339 tdcE; keto-acid formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D YE1532 pflB; formate acetyltransferase 1 K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D YE2238 adhE; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D YE2821 probable alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D YE3722 Probable NADP-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D YE1334 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D YE1333 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D YE2385 pykA; pyruvate kinase II K00873 PK; pyruvate kinase [EC:2.7.1.40]
D YE2164 pykF; pyruvate kinase I K00873 PK; pyruvate kinase [EC:2.7.1.40]
D YE3268 accA; acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D YE3811 accB; biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D YE3812 accC; biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D YE1311 accD; acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D YE1596 putative acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D YE1507 poxB; pyruvate dehydrogenase [cytochrome] K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1]
D YE2098 ldhA; D-lactate dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
D YE2883 dld; D-lactate dehydrogenase K03777 dld; D-lactate dehydrogenase (quinone) [EC:1.1.5.12]
D YE2153 gloA; lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D YE0919 gloB; putative hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D YE1559 metallo-beta-lactamase superfamily protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D YE2422 putative oxidoreductase K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D YE4159 putative D-isomer specific 2-hydroxyacid dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D YE2794 sfcA; NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D YE1162 maeB; NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D YE0414 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D YE0816 fumA; fumarate hydratase, class I K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D YE4036 fumB; fumarate hydratase class I, anaerobic K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D YE2016 fumC; fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D YE0364 frdA; fumarate reductase flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D YE0363 frdB; fumarate reductase iron-sulfur protein K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D YE0362 frdC; fumarate reductase hydrophobic protein K00246 frdC; succinate dehydrogenase subunit C
D YE0361 frdD; fumarate reductase hydrophobic protein K00247 frdD; succinate dehydrogenase subunit D
D YE0116 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D YE3986 pckA; phosphoenolpyruvate carboxykinase [ATP] K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D YE2176 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D YE3881 aceB; malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9]
D YE0654 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:yen00630]
D YE3880 aceA; isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1]
D YE0309 acs; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D YE3881 aceB; malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9]
D YE0414 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D YE2949 gltA; citrate synthase GltA K01647 CS; citrate synthase [EC:2.3.3.1]
D YE1964 acnA; aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D YE0705 acnB; aconitate hydratase 2 K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D YE1895 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D YE4042 mutE; methylaspartate mutase E chain K19268 glmE; methylaspartate mutase epsilon subunit [EC:5.4.99.1]
D YE4040 mamA; methylaspartate mutase K01846 glmS; methylaspartate mutase sigma subunit [EC:5.4.99.1]
D YE4043 methylaspartate ammonia-lyase K04835 mal; methylaspartate ammonia-lyase [EC:4.3.1.2]
D YE1380 katA; catalase K03781 katE; catalase [EC:1.11.1.6]
D YE2422 putative oxidoreductase K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D YE4159 putative D-isomer specific 2-hydroxyacid dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D YE3970 gph; phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D YE0027 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D YE1047 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D YE3391 gcvP; glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D YE3393 gcvT; aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D YE0131 putative pyridine nucleotide-disulphide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YE0702 lpdA; dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YE3392 gcsH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D YE0347 glxK; putative glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D YE2382 eda; KHG/KDPG aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D YE4135 fdoG; formate dehydrogenase-o, major subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D YE4134 fdoH; formate dehydrogenase-O, iron-sulfur subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D YE4133 fdoI; formate dehydrogenase, cytochrome b556 protein K00127 fdoI; formate dehydrogenase subunit gamma
D YE2247 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D YE2462 hutG; putative N-formylglutamate amidohydrolase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68]
C 00640 Propanoate metabolism [PATH:yen00640]
D YE0309 acs; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D YE1334 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D YE0338 tdcD; propionate kinase K00932 tdcD; propionate kinase [EC:2.7.2.15]
D YE2747 pduW; putative propionate kinase K19697 pduW; propionate kinase [EC:2.7.2.15]
D YE1333 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D YE2737 pduL; putative propanediol utilization protein K13923 pduL; phosphate propanoyltransferase [EC:2.3.1.222]
D YE0131 putative pyridine nucleotide-disulphide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YE0702 lpdA; dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YE0339 tdcE; keto-acid formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D YE1532 pflB; formate acetyltransferase 1 K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D YE3807 yhdH; probable zinc-binding dehydrogenase K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D YE0268 fadB; fatty acid oxidation complex alpha subunit K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D YE1277 faoA; putative fatty oxidation complex alpha subunit,enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D YE3268 accA; acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D YE3811 accB; biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D YE3812 accC; biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D YE1311 accD; acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D YE1894 possible dehydratase K11264 scpB; methylmalonyl-CoA decarboxylase [EC:4.1.1.-]
D YE1895 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D YE1893 putative 4-hydroxybutyrate coenzyme A transferase K22214 scpC; propionyl-CoA:succinyl-CoA transferase [EC:2.8.3.27]
D YE2942 sucC; succinyl-CoA synthetase beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D YE2941 sucD; succinyl-CoA synthetase alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D YE4031 putative aldehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D YE0705 acnB; aconitate hydratase 2 K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D YE1587 mgsA; methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
D YE3651 putative iron-containing alcohol dehydrogenase K08325 yqhD; NADP-dependent alcohol dehydrogenase [EC:1.1.-.-]
D YE0539 gldA; glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
D YE2730 pduC; putative propanediol utilization protein: dehydratase, large subunit K01699 pduC; propanediol dehydratase large subunit [EC:4.2.1.28]
D YE2731 pduD; putative propanediol utilization protein: dehydratase, medium subunit K13919 pduD; propanediol dehydratase medium subunit [EC:4.2.1.28]
D YE2732 pduE; putative propanediol utilization protein: dehydratase, small subunit K13920 pduE; propanediol dehydratase small subunit [EC:4.2.1.28]
D YE2742 pduQ; putative propanediol utilization protein: propanol dehydrogenase K13921 pduQ; 1-propanol dehydrogenase
D YE2741 pduP; putative propanediol utilization protein: CoA-dependent propionaldehyde dehydrogenase K13922 pduP; propionaldehyde dehydrogenase [EC:1.2.1.87]
C 00650 Butanoate metabolism [PATH:yen00650]
D YE0268 fadB; fatty acid oxidation complex alpha subunit K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D YE1277 faoA; putative fatty oxidation complex alpha subunit,enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D YE4179 conserved hypothetical protein K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D YE2238 adhE; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D YE2946 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D YE2945 sdhB; succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D YE2948 sdhC; succinate dehydrogenase cytochrome b-556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D YE2947 sdhD; succinate dehydrogenase hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D YE0364 frdA; fumarate reductase flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D YE0363 frdB; fumarate reductase iron-sulfur protein K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D YE0362 frdC; fumarate reductase hydrophobic protein K00246 frdC; succinate dehydrogenase subunit C
D YE0361 frdD; fumarate reductase hydrophobic protein K00247 frdD; succinate dehydrogenase subunit D
D YE3693 gadA; glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D YE3793 gabD; succinate-semialdehyde dehydrogenase [NADP+] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D YE0339 tdcE; keto-acid formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D YE1532 pflB; formate acetyltransferase 1 K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D YE2102 nifJ; putative pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D YE2060 ilvB; putative acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D YE0658 ilvI; acetolactate synthase isozyme III large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D YE4017 budB; acetolactate synthase, catabolic K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D YE0148 ilvG; acetolactate synthase isozyme II large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D YE2061 ilvN; putative acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D YE0659 ilvH; acetolactate synthase isozyme III small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D YE0149 ilvM; acetolactate synthase isozyme II small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D YE4016 budA; alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
C 00660 C5-Branched dibasic acid metabolism [PATH:yen00660]
D YE2060 ilvB; putative acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D YE0658 ilvI; acetolactate synthase isozyme III large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D YE4017 budB; acetolactate synthase, catabolic K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D YE0148 ilvG; acetolactate synthase isozyme II large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D YE2061 ilvN; putative acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D YE0659 ilvH; acetolactate synthase isozyme III small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D YE0149 ilvM; acetolactate synthase isozyme II small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D YE4016 budA; alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
D YE2942 sucC; succinyl-CoA synthetase beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D YE2941 sucD; succinyl-CoA synthetase alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D YE4043 methylaspartate ammonia-lyase K04835 mal; methylaspartate ammonia-lyase [EC:4.3.1.2]
D YE4042 mutE; methylaspartate mutase E chain K19268 glmE; methylaspartate mutase epsilon subunit [EC:5.4.99.1]
D YE4040 mamA; methylaspartate mutase K01846 glmS; methylaspartate mutase sigma subunit [EC:5.4.99.1]
D YE0652 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D YE0651 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D YE0653 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:yen00562]
D YE2054 putative inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D YE1054 suhB; putative inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D YE2600 probable histidine acid phosphatase K01093 appA; 4-phytase / acid phosphatase [EC:3.1.3.26 3.1.3.2]
D YE4026 idh; myo-inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D YE4025 conserved hypothetical protein K03335 iolE; inosose dehydratase [EC:4.2.1.44]
D YE4027 putative thiamine pyrophosphate-dependent protein K03336 iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) [EC:3.7.1.22]
D YE4030 conserved hypothetical protein K03337 iolB; 5-deoxy-glucuronate isomerase [EC:5.3.1.30]
D YE4028 putative carbohydrate kinase K03338 iolC; 5-dehydro-2-deoxygluconokinase [EC:2.7.1.92]
D YE4031 putative aldehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D YE0093 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:yen00190]
D YE1344 nuoA; NADH dehydrogenase I chain A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D YE1345 nuoB; NADH dehydrogenase I chain B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D YE1346 nuoD; NADH dehydrogenase I chain C/D K13378 nuoCD; NADH-quinone oxidoreductase subunit C/D [EC:7.1.1.2]
D YE1347 nuoE; NADH dehydrogenase I chain E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D YE1348 nuoF; NADH dehydrogenase I chain F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D YE1349 nuoG; NADH dehydrogenase I chain G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D YE1350 nuoH; NADH dehydrogenase I chain H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D YE1351 nuoI; NADH Dehydrogenase I chain I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D YE1352 nuoJ; NADH dehydrogenase I chain J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D YE1353 nuoK; NADH dehydrogenase i chain k K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D YE1354 nuoL; NADH dehydrogenase I chain L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D YE1355 nuoM; NADH dehydrogenase I chain M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D YE1356 nuoN; NADH dehydrogenase I chain N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D YE1707 ndh; NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D YE2946 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D YE2945 sdhB; succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D YE2948 sdhC; succinate dehydrogenase cytochrome b-556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D YE2947 sdhD; succinate dehydrogenase hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D YE0364 frdA; fumarate reductase flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D YE0363 frdB; fumarate reductase iron-sulfur protein K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D YE0362 frdC; fumarate reductase hydrophobic protein K00246 frdC; succinate dehydrogenase subunit C
D YE0361 frdD; fumarate reductase hydrophobic protein K00247 frdD; succinate dehydrogenase subunit D
D YE3145 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D YE3144 cyoD; cytochrome O ubiquinol oxidase subunit CyoD K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV
D YE3143 cyoC; cytochrome O ubiquinol oxidase subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III
D YE3142 cyoB; cytochrome O ubiquinol oxidase subunit I K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3]
D YE3141 cyoA; cytochrome O ubiquinol oxidase subunit II K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3]
D YE2939 cydA; cytochrome D ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D YE2471 putative cytochrome oxidase subunit K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D YE2938 cydB; cytochrome D ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D YE2472 putative cytochrome oxidase subunit K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D YE4208 atpA; ATP synthase alpha subunit protein K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D YE4206 atpD; ATP synthase beta subunit protein K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D YE4207 atpG; ATP synthase gamma subunit protein K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D YE4209 atpH; ATP synthase delta subunit protein K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D YE4205 atpC; ATP synthase epsilon subunit protein K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D YE4212 atpB; ATP synthase subunit B protein K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D YE4210 atpF; ATP synthase subunit B protein K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D YE4211 atpE; ATP synthase subunit C protein K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D YE0408 ppa; inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D YE1120 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:yen00680]
D YE2821 probable alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D YE2822 putative esterase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12]
D YE4135 fdoG; formate dehydrogenase-o, major subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D YE4134 fdoH; formate dehydrogenase-O, iron-sulfur subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D YE4133 fdoI; formate dehydrogenase, cytochrome b556 protein K00127 fdoI; formate dehydrogenase subunit gamma
D YE2810 fdhF; formate dehydrogenase H K22015 fdhF; formate dehydrogenase (hydrogenase) [EC:1.17.98.4 1.17.98.-]
D YE1047 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D YE0747 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D YE0116 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D YE0414 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D YE3413 fbaA; fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D YE0410 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D YE0098 glpX; putative fructose 1,6-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D YE0089 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D YE1445 torC; cytochrome C-type protein K03532 torC; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorC
D YE1444 torA; putative molybdopterin-containing oxidoreductase K07812 torZ; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3]
D YE1334 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D YE1333 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D YE0309 acs; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D YE2176 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D YE2924 gpmA; phosphoglycerate mutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D YE0592 gpmB; putative phosphoglycerate mutase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D YE0077 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D YE3400 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D YE2604 putative oxidoreductase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D YE1537 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D YE0578 serB; phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:yen00910]
D YE0733 nark; nitrite extrusion protein K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D YE1156 napA; periplasmic nitrate reductase precursor K02567 napA; nitrate reductase (cytochrome) [EC:1.9.6.1]
D YE1157 napB; cytochrome C-type protein NapB precursor K02568 napB; nitrate reductase (cytochrome), electron transfer subunit
D YE3965 nirB; nitrite reductase K00362 nirB; nitrite reductase (NADH) large subunit [EC:1.7.1.15]
D YE3966 nirD; nitrite reductase [NAD K00363 nirD; nitrite reductase (NADH) small subunit [EC:1.7.1.15]
D YE1510 hcp; putative prismane protein homologue K05601 hcp; hydroxylamine reductase [EC:1.7.99.1]
D YE4051 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D YE0027 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D YE3735 gltB; glutamate synthase [NADPH] large chain precursor K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D YE3736 gltD; glutamate synthase [NADPH] small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D YE0714 yadF; putative carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D YE3352 putative carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:yen00920]
D YE1194 cysP; thiosulfate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D YE0091 sbp1; exported sulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D YE1195 cysT; sulfate transport system permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D YE1196 cysW; sulfate transport system permease protein CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D YE1197 cysA; sulfate transport ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D YE3948 tauA; putative taurine-binding periplasmic protein precursor K15551 tauA; taurine transport system substrate-binding protein
D YE3946 tauC; putative taurine transport system permease protein K15552 tauC; taurine transport system permease protein
D YE3947 tauB; putative taurine transport ATP-binding protein K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]
D YE3945 tauD; putative taurine dioxygenase K03119 tauD; taurine dioxygenase [EC:1.14.11.17]
D YE0763 cysN; sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D YE0762 cysD; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D YE0764 cysC; adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D YE0400 cysQ; inositol monophosphatase family protein K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D YE0757 cysH; phosphoadenosine phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D YE0755 cysJ; sulfite reductase [NADPH] flavoprotein alpha-component K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D YE0756 cysI; sulfite reductase [NADPH] hemoprotein beta-component K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D YE1617 ttrA; tetrathionate reductase subunit A K08357 ttrA; tetrathionate reductase subunit A
D YE1615 ttrB; tetrathionate reductase subunit B K08358 ttrB; tetrathionate reductase subunit B
D YE1616 ttrC; tetrathionate reductase subunit C K08359 ttrC; tetrathionate reductase subunit C
D YE2868 putative sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D YE3989 conserved hypothetical protein K02439 glpE; thiosulfate sulfurtransferase [EC:2.8.1.1]
D YE0082 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D YE3124 putative Pyridoxal-phosphate dependent protein K01738 cysK; cysteine synthase [EC:2.5.1.47]
D YE1208 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D YE3882 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D YE0111 metB; cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:yen00061]
D YE3268 accA; acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D YE3811 accB; biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D YE3812 accC; biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D YE1311 accD; acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D YE0899 putative acyl carrier protein K02078 acpP; acyl carrier protein
D YE1636 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D YE0898 putative acyl carrier protein K02078 acpP; acyl carrier protein
D YE0797 hypothetical protein K02078 acpP; acyl carrier protein
D YE3533 acpY; hypothetical protein K02078 acpP; acyl carrier protein
D YE1634 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D YE1633 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D YE0908 putative beta-ketoacyl-[ACP] synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D YE1287 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D YE1576 putative 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D YE0911 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D YE1637 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D YE0795 putative acyl-carrier-protein K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D YE1635 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YE0910 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YE2069 putative short chain dehydrogenease K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YE0798 putative acyl-carrier-protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YE1578 fabA; 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D YE3273 fabZ; (3R)-hydroxymyristoyl-(acyl carrier protein) dehydratase (EC 4.2.1.-) K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D YE4179 conserved hypothetical protein K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D YE0656 putative AMP-binding enzyme-family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D YE2375 fadD; long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:yen00071]
D YE1276 putative 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D YE0267 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D YE0268 fadB; fatty acid oxidation complex alpha subunit K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D YE1277 faoA; putative fatty oxidation complex alpha subunit,enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D YE3224 yafH; probable acyl-CoA dehydrogenase K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-]
D YE0656 putative AMP-binding enzyme-family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D YE2375 fadD; long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D YE3327 aas; Aas bifunctional protein K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
D YE2821 probable alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D YE2238 adhE; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:yen00561]
D YE0347 glxK; putative glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D YE3722 Probable NADP-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D YE0540 dhaK; putative dihydroxyacetone kinase K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121]
D YE0541 conserved hypothetical protein K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121]
D YE0542 multifunctional PTS-system sugar transferase K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]
D YE0539 gldA; glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
D YE0099 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D YE0824 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D YE3857 plsB; glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D YE1632 plsX; fatty acid/phospholipid synthesis protein K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D YE3680 putative membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D YE3655 plsC; putative acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D YE3856 dgkA; diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D YE1842 lipase K01046 lip; triacylglycerol lipase [EC:3.1.1.3]
C 00564 Glycerophospholipid metabolism [PATH:yen00564]
D YE0081 gpsA; glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D YE4008 glyD; aerobic glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D YE0212 glpA; anaerobic glycerol-3-phosphate dehydrogenase subunit A K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D YE0213 glpB; putative anaerobic glycerol-3-phosphate dehydrogenase subunit B K00112 glpB; glycerol-3-phosphate dehydrogenase subunit B [EC:1.1.5.3]
D YE0214 glpC; anaerobic glycerol-3-phosphate dehydrogenase subunit C K00113 glpC; glycerol-3-phosphate dehydrogenase subunit C
D YE3857 plsB; glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D YE3680 putative membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D YE3655 plsC; putative acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D YE3856 dgkA; diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D YE0203 pldA; phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D YE0207 pldB; putative lysophospholipase K01048 pldB; lysophospholipase [EC:3.1.1.5]
D YE0209 glpQ; glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D YE0245 ugpQ; glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D YE3327 aas; Aas bifunctional protein K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
D YE4061 cdh; CDP-diacylglycerol pyrophosphatase K01521 cdh; CDP-diacylglycerol pyrophosphatase [EC:3.6.1.26]
D YE3278 cdsA; phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D YE3248 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D YE0367 psd; phosphatidylserine decarboxylase proenzyme K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D YE1829 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D YE3157 pgpA; phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D YE1966 pgpB; phosphatidylglycerophosphatase B K01096 pgpB; phosphatidylglycerophosphatase B [EC:3.1.3.27 3.6.1.75 3.1.3.4 3.6.1.27]
D YE1028 yfhB; putative membrane protein K18697 pgpC; phosphatidylglycerophosphatase C [EC:3.1.3.27]
D YE2227 cls; cardiolipin synthetase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism [PATH:yen00565]
D YE0203 pldA; phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00600 Sphingolipid metabolism [PATH:yen00600]
D YE2592 lacZ; beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D YE2974 chb; chitobiase precursor K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
C 00590 Arachidonic acid metabolism
D YE0203 pldA; phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00591 Linoleic acid metabolism
D YE0203 pldA; phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00592 alpha-Linolenic acid metabolism [PATH:yen00592]
D YE0203 pldA; phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D YE1276 putative 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D YE0267 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:yen01040]
D YE3055 tesA; putative acyl-CoA thioesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D YE3118 tesB; acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D YE2221 putative acyl-CoA thioester hydrolase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:yen00230]
D YE3664 putative MutT-family protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D YE3980 putative hydrolase K08312 nudE; ADP compounds hydrolase [EC:3.6.1.-]
D YE0572 deoB; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D YE3104 metalloenzyme superfamily protein K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D YE2967 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D YE2435 prsA; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D YE1315 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D YE0302 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D YE1125 purN; putative phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D YE1784 purT; phosphoribosylglycinamide formyltransferase K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21]
D YE1032 purL; phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D YE1127 purI; putative phosphoribosylaminoimidazole synthetase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D YE3052 purK; phosphoribosylaminoimidazole carboxylase ATPase subunit PurK K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D YE3051 purE; phosphoribosylaminoimidazole carboxylase catalytic subunit PurE K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D YE1140 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D YE1720 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D YE0303 purH; bifunctional purine biosynthesis protein PurH [includes: phosphoribosylaminoimidazolecarboxamide formyltransferase and IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D YE3094 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D YE3066 ushA; UDP-sugar hydrolase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D YE0772 surE; stationary-phase survival protein K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D YE2982 nagD; putative N-acetylglucosamine metabolism protein K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D YE3983 conserved hypothetical protein K20881 yrfG; GMP/IMP 5'-nucleotidase [EC:3.1.3.-]
D YE3069 gsk; inosine-guanosine kinase K00892 gsk; inosine kinase [EC:2.7.1.73]
D YE0574 deoD; purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D YE3187 conserved hypothetical protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D YE0892 conserved hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D YE0713 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D YE1081 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D YE1069 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D YE0591 conserved hypothetical protein K01529 yjjX; inosine/xanthosine triphosphatase [EC:3.6.1.73]
D YE3437 conserved hypothetical protein K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D YE3205 gpt; xanthine-guanine phosphoribosyltransferase K00769 gpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D YE1082 guaA; putative GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D YE0686 guaC; GMP reductase K00364 guaC; GMP reductase [EC:1.7.1.7]
D YE0047 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D YE0927 nrdE; ribonucleoside-diphosphate reductase 2 alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D YE1393 nrdA; ribonucleoside-diphosphate reductase 1 alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D YE1392 nrdB; ribonucleoside-diphosphate reductase 1 beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D YE0926 nrdF; ribonucleoside-diphosphate reductase 2 beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D YE0482 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D YE0740 dgt; deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D YE1340 conserved hypothetical protein K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89]
D YE0045 spoT; guanosine-3',5'-bisbis(diphosphate) 3'-pyrophosphydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D YE0165 gppA; guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D YE1119 ppx; putative exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D YE0744 relA; GTP pyrophosphokinase K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5]
D YE0189 cyaA; adenylate cyclase K05851 cyaA; adenylate cyclase, class 1 [EC:4.6.1.1]
D YE2882 cyaB; adenylate cyclase 2 K05873 cyaB; adenylate cyclase, class 2 [EC:4.6.1.1]
D YE2956 putative 3',5'-cyclic-nucleotide phosphodiesterase K01120 cpdP; 3',5'-cyclic-nucleotide phosphodiesterase [EC:3.1.4.17]
D YE0382 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D YE2009 add; adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4]
D YE2052 amn; putative AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4]
D YE3296 conserved hypothetical protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D YE2940 putative 5'-nucleotidase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D YE0399 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase precursor K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D YE3089 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D YE0745 conserved hypothetical protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D YE3662 icc; Icc protein homologue K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D YE0628 apaH; bis(5'nucleosyl)-tetraphosphatase K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41]
D YE0764 cysC; adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D YE0763 cysN; sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D YE0762 cysD; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D YE0953 ureC; urease alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D YE0952 ureB; urease beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5]
D YE0951 ureA; urease gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00240 Pyrimidine metabolism [PATH:yen00240]
D YE0622 carB; carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D YE0621 carA; carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D YE3766 pyrB; aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D YE3767 pyrI; aspartate carbamoyltransferase regulatory chain K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D YE3781 conserved hypothetical protein K01465 URA4; dihydroorotase [EC:3.5.2.3]
D YE1625 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D YE1568 pyrD; dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D YE0059 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D YE1973 pyrF; orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D YE3282 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D YE1069 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D YE0745 conserved hypothetical protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D YE3802 yhdE; putative inhibitor of septum formation K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D YE3701 conserved hypothetical protein K07043 upp; UTP pyrophosphatase [EC:3.6.1.-]
D YE0746 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D YE1539 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D YE2255 nudG; putative pyrophosphohydrolase K08320 nudG; (d)CTP diphosphatase [EC:3.6.1.65]
D YE2783 udk; uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D YE3066 ushA; UDP-sugar hydrolase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D YE0772 surE; stationary-phase survival protein K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D YE2982 nagD; putative N-acetylglucosamine metabolism protein K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D YE2062 haloacid dehalogenase-like hydrolase family protein K08723 yjjG; pyrimidine 5'-nucleotidase [EC:3.1.3.-]
D YE0251 udp; uridine phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3]
D YE3187 conserved hypothetical protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D YE1128 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D YE2940 putative 5'-nucleotidase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D YE0399 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase precursor K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D YE3296 conserved hypothetical protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D YE2792 cdd; cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D YE3964 codA; cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D YE0482 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D YE2782 dcd; deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D YE0927 nrdE; ribonucleoside-diphosphate reductase 2 alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D YE1393 nrdA; ribonucleoside-diphosphate reductase 1 alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D YE1392 nrdB; ribonucleoside-diphosphate reductase 1 beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D YE0926 nrdF; ribonucleoside-diphosphate reductase 2 beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D YE1340 conserved hypothetical protein K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89]
D YE1640 tmk; thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D YE0061 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D YE0571 deoA; thymidine phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4]
D YE2239 tdk; thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D YE3317 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D YE0805 putative amino acid hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D YE1950 ssuD; alkanesulfonate monooxygenase K09018 rutA; pyrimidine oxygenase [EC:1.14.99.46]
D YE1945 hpaC; 4-hydroxyphenylacetate 3-monooxygenase coupling protein K09024 rutF; flavin reductase [EC:1.5.1.-]
D YE1949 putative isochorismatase K09020 rutB; ureidoacrylate peracid hydrolase [EC:3.5.1.110]
D YE1948 conserved hypothetical protein K09021 rutC; aminoacrylate peracid reductase
D YE1947 putative hydrolase K09023 rutD; aminoacrylate hydrolase [EC:3.5.1.-]
D YE2028 putative oxidoreductase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
D YE1946 putative oxidoreductase K09019 rutE; 3-hydroxypropanoate dehydrogenase [EC:1.1.1.-]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:yen00250]
D YE1561 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D YE1009 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D YE1535 ansB; putative L-asparaginase II precursor K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D YE2261 ansA; L-asparaginase I K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D YE0003 asnA; aspartate-ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D YE2983 asnB; asparagine synthetase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D YE3235 putative hydrolase K13566 NIT2; omega-amidase [EC:3.5.1.3]
D YE1341 aat; probable aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D YE0351 aspA; aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D YE2680 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D YE0121 argH; putative argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D YE0382 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D YE1720 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D YE3766 pyrB; aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D YE3767 pyrI; aspartate carbamoyltransferase regulatory chain K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D YE3693 gadA; glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D YE3793 gabD; succinate-semialdehyde dehydrogenase [NADP+] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D YE3735 gltB; glutamate synthase [NADPH] large chain precursor K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D YE3736 gltD; glutamate synthase [NADPH] small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D YE4051 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D YE1933 putA; bifunctional PutA protein [includes: proline dehydrogenase and delta-1-pyrroline-5-carboxylate K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D YE0027 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D YE0622 carB; carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D YE0621 carA; carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D YE3440 putative glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D YE3691 putative glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D YE2500 putative glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D YE4203 glmS; glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D YE1315 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:yen00260]
D YE3873 lysC; lysine-sensitive aspartokinase III K00928 lysC; aspartate kinase [EC:2.7.2.4]
D YE0600 thrA; bifunctional aspartokinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D YE0112 metL; bifunctional aspartokinase/homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D YE4018 asd; aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D YE0601 thrB; homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D YE0602 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D YE1505 ltaA; L-allo-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D YE1047 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D YE2422 putative oxidoreductase K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D YE4159 putative D-isomer specific 2-hydroxyacid dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D YE0347 glxK; putative glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D YE2924 gpmA; phosphoglycerate mutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D YE0592 gpmB; putative phosphoglycerate mutase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D YE0077 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D YE3400 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D YE2604 putative oxidoreductase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D YE1537 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D YE0578 serB; phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D YE2028 putative oxidoreductase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
D YE0073 kbl; 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D YE0074 tdh; threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103]
D YE3391 gcvP; glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D YE3393 gcvT; aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D YE0131 putative pyridine nucleotide-disulphide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YE0702 lpdA; dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YE3392 gcsH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D YE3248 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D YE1470 uptG; cystathionine beta-lyase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D YE1469 uptH; putative cystathionine gamma-synthase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D YE1472 sdaB; L-serine dehydratase 2 K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D YE1779 sdaA; L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D YE0336 tdcB; threonine dehydratase catabolic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D YE0152 ilvA; threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D YE4167 pyridoxal-phosphate dependent enzyme K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D YE0800 dsdA; D-serine dehydratase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
D YE1289 putative aspartate/glutamate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D YE2214 trpA; tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D YE2213 trpB; tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:yen00270]
D YE0082 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D YE3124 putative Pyridoxal-phosphate dependent protein K01738 cysK; cysteine synthase [EC:2.5.1.47]
D YE1208 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D YE1469 uptH; putative cystathionine gamma-synthase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D YE3647 metC; putative cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D YE2010 putative aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D YE1470 uptG; cystathionine beta-lyase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D YE3875 metH; 5-Methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D YE0249 metE; 5-methyltetrahydropteroyltriglutamate--homocyst eine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D YE3421 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D YE0709 speD; S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D YE0710 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D YE1600 yenI; N-acylhomoserine lactone synthase K22956 expI; acyl homoserine lactone synthase [EC:2.3.1.184]
D YE0739 mtnN; MTA/SAH nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D YE3228 mtrK; probable 5-methylthioribose kinase K00899 mtnK; 5-methylthioribose kinase [EC:2.7.1.100]
D YE0892 conserved hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D YE3230 putative translation initiation factor K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D YE3233 putative sugar aldolase K08964 mtnB; methylthioribulose-1-phosphate dehydratase [EC:4.2.1.109]
D YE3232 MasA; bifunctional enolase-phosphatase E-1 enzyme K09880 mtnC; enolase-phosphatase E1 [EC:3.1.3.77]
D YE3231 e-2/e-2' protein K08967 mtnD; 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase [EC:1.13.11.53 1.13.11.54]
D YE3847 tyrB; aromatic-amino-acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D YE1866 conserved hypothetical protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D YE1681 prophage encoded DNA modification methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D YE2362 dcm; putative cytosine-specific modification methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D YE0839 luxS; autoinducer production protein K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D YE3873 lysC; lysine-sensitive aspartokinase III K00928 lysC; aspartate kinase [EC:2.7.2.4]
D YE0600 thrA; bifunctional aspartokinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D YE0112 metL; bifunctional aspartokinase/homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D YE4018 asd; aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D YE3882 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D YE0111 metB; cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D YE0150 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D YE0838 gshA; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D YE3427 gshB; glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D YE1561 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D YE2868 putative sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D YE1289 putative aspartate/glutamate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D YE2517 YedO; putative deaminase K05396 dcyD; D-cysteine desulfhydrase [EC:4.4.1.15]
D YE0414 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D YE1472 sdaB; L-serine dehydratase 2 K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D YE1779 sdaA; L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D YE1198 cysM; cysteine synthase B K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144]
D YE3400 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D YE2604 putative oxidoreductase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D YE1537 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:yen00280]
D YE0150 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D YE0131 putative pyridine nucleotide-disulphide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YE0702 lpdA; dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YE0268 fadB; fatty acid oxidation complex alpha subunit K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D YE1277 faoA; putative fatty oxidation complex alpha subunit,enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D YE1276 putative 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D YE0267 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D YE1895 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D YE4031 putative aldehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:yen00290]
D YE0336 tdcB; threonine dehydratase catabolic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D YE0152 ilvA; threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D YE4167 pyridoxal-phosphate dependent enzyme K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D YE0652 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D YE0651 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D YE0653 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D YE2060 ilvB; putative acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D YE0658 ilvI; acetolactate synthase isozyme III large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D YE4017 budB; acetolactate synthase, catabolic K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D YE0148 ilvG; acetolactate synthase isozyme II large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D YE2061 ilvN; putative acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D YE0659 ilvH; acetolactate synthase isozyme III small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D YE0149 ilvM; acetolactate synthase isozyme II small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D YE0155 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D YE0151 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D YE0150 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D YE4161 avtA; valine--pyruvate aminotransferase K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66]
D YE1341 aat; probable aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D YE0654 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:yen00300]
D YE3873 lysC; lysine-sensitive aspartokinase III K00928 lysC; aspartate kinase [EC:2.7.2.4]
D YE0600 thrA; bifunctional aspartokinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D YE0112 metL; bifunctional aspartokinase/homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D YE4018 asd; aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D YE1137 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D YE0620 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D YE3287 dapD; 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D YE3957 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D YE1147 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D YE0192 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D YE3332 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D YE0667 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-dia minopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D YE0668 murF; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diami nopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:yen00310]
D YE2943 sucB; dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D YE0131 putative pyridine nucleotide-disulphide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YE0702 lpdA; dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YE0268 fadB; fatty acid oxidation complex alpha subunit K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D YE1277 faoA; putative fatty oxidation complex alpha subunit,enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D YE1289 putative aspartate/glutamate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D YE3267 ldcC; lysine decarboxylase, constitutive K01582 E4.1.1.18; lysine decarboxylase [EC:4.1.1.18]
D YE3793 gabD; succinate-semialdehyde dehydrogenase [NADP+] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D YE1545 conserved hypothetical protein K25986 ydcJ; 2-oxoadipate dioxygenase/decarboxylase [EC:1.13.11.93]
D YE2174 conserved hypothetical protein K26063 ydiJ; (R)-2-hydroxyglutarate dehydrogenase [EC:1.1.-.-]
C 00220 Arginine biosynthesis [PATH:yen00220]
D YE0494 argI; ornithine carbamoyltransferase chain I K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D YE2680 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D YE0121 argH; putative argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D YE0953 ureC; urease alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D YE0952 ureB; urease beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5]
D YE0951 ureA; urease gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D YE0535 arcA; arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6]
D YE3440 putative glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D YE3691 putative glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D YE2500 putative glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D YE0027 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D YE0622 carB; carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D YE0621 carA; carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D YE4051 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D YE1561 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D YE1341 aat; probable aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D YE3308 argA; amino-acid acetyltransferase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1]
D YE0120 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D YE0119 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D YE3957 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D YE0117 argE; acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:yen00330]
D YE3964 codA; cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D YE3419 speA; biosynthetic arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D YE3431 conserved hypothetical protein K10536 aguA; agmatine deiminase [EC:3.5.3.12]
D YE3430 putative carbon-nitrogen hydrolase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53]
D YE0455 speF; ornithine decarboxylase, inducible K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D YE3527 speF2; ornithine decarboxylase, inducible K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D YE3447 speC; ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D YE0710 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D YE0709 speD; S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D YE1124 speG; spermidine acetyltransferase K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57]
D YE2468 astA; arginine N-succinyltransferase K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109]
D YE2466 astB; succinylarginine dihydrolase K01484 astB; succinylarginine dihydrolase [EC:3.5.3.23]
D YE2469 astC; succinylornithine aminotransferase K00840 astC; succinylornithine aminotransferase [EC:2.6.1.81]
D YE2467 astD; succinylglutamic semialdehyde dehydrogenase K06447 astD; succinylglutamic semialdehyde dehydrogenase [EC:1.2.1.71]
D YE2465 astE; succinylglutamate desuccinylase K05526 astE; succinylglutamate desuccinylase [EC:3.5.1.96]
D YE3434 proC; putative pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D YE1933 putA; bifunctional PutA protein [includes: proline dehydrogenase and delta-1-pyrroline-5-carboxylate K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D YE3202 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D YE3201 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D YE1793 pip; proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D YE1561 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:yen00340]
D YE2765 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D YE2772 hisI; histidine biosynthesis bifunctional protein [includes: phosphoribosyl-amp cyclohydrolase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D YE2770 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D YE2769 hisH; amidotransferase K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D YE2771 hisF; histidine biosynthesic protein (cyclase) K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D YE2768 hisB; histidinol-phosphatase and imidazoleglycerol-phosphate dehydratase K01089 hisB; imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15]
D YE2767 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D YE2766 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D YE4094 hutH; histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D YE4095 hutU; urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D YE2461 hutI; imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D YE2459 putative chlorohydrolase K05603 hutF; formimidoylglutamate deiminase [EC:3.5.3.13]
D YE2462 hutG; putative N-formylglutamate amidohydrolase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68]
C 00350 Tyrosine metabolism [PATH:yen00350]
D YE1561 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D YE2767 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D YE3847 tyrB; aromatic-amino-acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D YE2821 probable alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D YE2238 adhE; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D YE3793 gabD; succinate-semialdehyde dehydrogenase [NADP+] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00360 Phenylalanine metabolism [PATH:yen00360]
D YE1561 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D YE2767 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D YE3847 tyrB; aromatic-amino-acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D YE4024 Hypothetical protein K03825 aaaT; L-phenylalanine/L-methionine N-acetyltransferase [EC:2.3.1.53 2.3.1.-]
D YE2281 dadA; D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D YE3021 putative phenylalanine and histidine ammonia-lyase K10775 PAL; phenylalanine ammonia-lyase [EC:4.3.1.24]
C 00380 Tryptophan metabolism [PATH:yen00380]
D YE2943 sucB; dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D YE0131 putative pyridine nucleotide-disulphide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YE0702 lpdA; dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YE0268 fadB; fatty acid oxidation complex alpha subunit K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D YE1277 faoA; putative fatty oxidation complex alpha subunit,enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D YE0650 tnaA; tryptophanase K01667 tnaA; tryptophanase [EC:4.1.99.1]
D YE1222 ipdC; indole-3-pyruvate decarboxylase K04103 ipdC; indolepyruvate decarboxylase [EC:4.1.1.74]
D YE1380 katA; catalase K03781 katE; catalase [EC:1.11.1.6]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:yen00400]
D YE0850 aroF; phospho-2-dehydro-3-deoxyheptonate aldolase,tyr-sensitive K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D YE2925 aroG; phospho-2-dehydro-3-deoxyheptonate aldolase,phe-sensitive K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D YE2178 aroH; phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D YE3974 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D YE3810 aroQ; putative class II dehydroquinase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D YE3884 aroE; shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D YE3188 aroL; shikimate kinase II K00891 aroK; shikimate kinase [EC:2.7.1.71]
D YE3975 aroK; shikimate kinase I K00891 aroK; shikimate kinase [EC:2.7.1.71]
D YE1538 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D YE1281 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D YE2209 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D YE2210 trpG; anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D YE2211 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D YE2212 trpC; tryptophan biosynthesis protein TrpCF K13498 trpCF; indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase [EC:4.1.1.48 5.3.1.24]
D YE2214 trpA; tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D YE2213 trpB; tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D YE0851 tyrA; T-protein [includes: chorismate mutase and prephenate dehydrogenase] K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12]
D YE0852 pheA; P-protein [includes: chorismate mutase and prephenate dehydratase] K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D YE1561 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D YE2767 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D YE3847 tyrB; aromatic-amino-acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:yen00410]
D YE0718 panD; aspartate 1-decarboxylase precursor K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D YE3693 gadA; glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D YE0719 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D YE0805 putative amino acid hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D YE0268 fadB; fatty acid oxidation complex alpha subunit K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D YE1277 faoA; putative fatty oxidation complex alpha subunit,enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D YE4031 putative aldehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00430 Taurine and hypotaurine metabolism [PATH:yen00430]
D YE3693 gadA; glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D YE3175 ggt; gamma-glutamyltranspeptidase precursor K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D YE3945 tauD; putative taurine dioxygenase K03119 tauD; taurine dioxygenase [EC:1.14.11.17]
D YE1333 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D YE1334 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism [PATH:yen00440]
D YE0475 phnI; PhnI protein K06164 phnI; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI [EC:2.7.8.37]
D YE0477 phnG; PhnG protein K06166 phnG; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnG [EC:2.7.8.37]
D YE0476 phnH; PhnH protein K06165 phnH; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnH [EC:2.7.8.37]
D YE0472 phnL; phosphonates transport ATP-binding protein K05780 phnL; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL [EC:2.7.8.37]
D YE0471 phnM; PhnM protein K06162 phnM; alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase [EC:3.6.1.63]
D YE0474 phnJ; PhnJ protein K06163 phnJ; alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase [EC:4.7.1.1]
D YE0469 phnP; PhnP protein K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]
C 00450 Selenocompound metabolism [PATH:yen00450]
D YE0111 metB; cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D YE3647 metC; putative cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D YE2010 putative aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D YE3875 metH; 5-Methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D YE0249 metE; 5-methyltetrahydropteroyltriglutamate--homocyst eine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D YE1469 uptH; putative cystathionine gamma-synthase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D YE2168 putative selenocysteine lyase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D YE1523 trxB; thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D YE0763 cysN; sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D YE0762 cysD; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D YE2258 selD; selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D YE4131 selA; L-seryl-tRNA selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D YE3780 possible L-seryl-tRNA selenocysteine synthase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D YE2785 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:yen00460]
D YE3175 ggt; gamma-glutamyltranspeptidase precursor K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D YE1535 ansB; putative L-asparaginase II precursor K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D YE2261 ansA; L-asparaginase I K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D YE0003 asnA; aspartate-ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D YE1047 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:yen00470]
D YE3848 alr; alanine racemase (biosynthetic) K01775 alr; alanine racemase [EC:5.1.1.1]
D YE2280 dadB; alanine racemase, catabolic K01775 alr; alanine racemase [EC:5.1.1.1]
D YE3211 ddlA; D-alanine--D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D YE0674 ddlB; D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D YE1289 putative aspartate/glutamate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D YE3440 putative glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D YE3691 putative glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D YE2500 putative glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D YE0140 murI; putative glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D YE0670 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D YE2112 putative mandelate racemase / muconate lactonizing protein K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D YE0800 dsdA; D-serine dehydratase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
D YE2517 YedO; putative deaminase K05396 dcyD; D-cysteine desulfhydrase [EC:4.4.1.15]
D YE0192 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D YE3332 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D YE2281 dadA; D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
C 00480 Glutathione metabolism [PATH:yen00480]
D YE3175 ggt; gamma-glutamyltranspeptidase precursor K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D YE2953 conserved hypothetical protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D YE2955A conserved hypothetical protein K23123 pxpB; 5-oxoprolinase (ATP-hydrolysing) subunit B [EC:3.5.2.9]
D YE2954 conserved hypothetical protein K23124 pxpC; 5-oxoprolinase (ATP-hydrolysing) subunit C [EC:3.5.2.9]
D YE0838 gshA; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D YE3427 gshB; glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D YE0500 pepA; cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D YE1064 pepB; peptidase B K07751 pepB; PepB aminopeptidase [EC:3.4.11.23]
D YE1567 pepN; putative aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D YE3206 pepD; aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D YE3841 Putative glutathione S transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D YE2137 gst; glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D YE1848 putative transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D YE1463 putative glutathione S-transferase-family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D YE4057 gor; glutathione reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D YE1725 icdA; isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D YE2773 gnd; 6-phosphogluconate dehydrogenase,decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D YE2383 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D YE2194 btuE; putative vitamin B12 transport protein K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D YE0132 putative peroxiredoxin/glutaredoxin family protein K24136 pgdX; glutathione-dependent peroxiredoxin [EC:1.11.1.27]
D YE0455 speF; ornithine decarboxylase, inducible K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D YE3527 speF2; ornithine decarboxylase, inducible K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D YE3447 speC; ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D YE0710 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:yen00511]
D YE2592 lacZ; beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D YE2974 chb; chitobiase precursor K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
C 00540 Lipopolysaccharide biosynthesis [PATH:yen00540]
D YE3272 lpxA; acyl-[acyl-carrier-protein]--UDP-N-acetylglucos amine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D YE2286 lpxA2; acyl-[acyl-carrier-protein]--udp-N-acetylglucos amine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D YE0678 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D YE3274 lpxD; UDP-3-o-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D YE3050 conserved hypothetical protein K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D YE3271 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D YE1544 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D YE3754 conserved hypothetical protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D YE2427 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D YE3755 conserved hypothetical protein K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D YE1550 kdsB; putative 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D YE0069 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D YE1612 htrB; putative lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D YE2386 msbB; lipid A biosynthesis acyltransferase K02560 lpxM; lauroyl-Kdo2-lipid IVA myristoyltransferase [EC:2.3.1.243]
D YE3039 putative exported protein K09953 lpxR; lipid A 3-O-deacylase [EC:3.1.1.-]
D YE1434 putative membrane protein K19803 lpxT; Kdo2-lipid A phosphotransferase [EC:2.7.4.29]
D YE2150 putative membrane protein K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D YE4090 yhjW; putative membrane protein K12975 eptB; KDO II ethanolaminephosphotransferase [EC:2.7.8.42]
D YE1762 putative exported protein K12973 pagP; lipid IVA palmitoyltransferase [EC:2.3.1.251]
D YE2188 dolichyl-phosphate-mannose-protein mannosyltransferase-family protein K07264 arnT; 4-amino-4-deoxy-L-arabinose transferase [EC:2.4.2.43]
D YE3829 ddg; putative membrane protein K12974 lpxP; KDO2-lipid IV(A) palmitoleoyltransferase [EC:2.3.1.242]
D YE3223 lpcA; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D YE3673 rfaE; ADP-heptose synthase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D YE3252 conserved hypothetical protein K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D YE0072 rfaD; ADP-L-glycero-D-manno-heptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D YE0070 rfaC; lipopolysaccharide heptosyltransferase-1 K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D YE0071 rfaF; ADP-heptose--LPS heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D YE0531 putative lipopolysaccharide core biosynthesis protein K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25]
C 00542 O-Antigen repeat unit biosynthesis [PATH:yen00542]
D YE0169 rfe; putative undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:yen00541]
D YE2777 galF; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D YE2778 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D YE3071 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D YE2917 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D YE2242 putative nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D YE0174 rffH; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D YE0173 rffG; dTDP-D-glucose-4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D YE3085 wbcA; putative epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D YE0176 rffA; putative lipopolysaccharide biosynthesis protein K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59]
D YE0175 rffC; putative lipopolysaccharide biosynthesis protein K16704 rffC; dTDP-4-amino-4,6-dideoxy-D-galactose acyltransferase [EC:2.3.1.210]
D YE3087 ddhA; glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D YE3086 ddhB; CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45]
D YE2015 manA; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D YE4098 manA; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D YE3072 manB; phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D YE3073 manC; mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D YE3075 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D YE3074 wbcJ; GDP-fucose synthetase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D YE4204 glmU; UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D YE0171 rffE; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D YE0172 rffD; putative UDP-glucose/GDP-mannose dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
C 00550 Peptidoglycan biosynthesis [PATH:yen00550]
D YE3746 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D YE0274 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D YE0673 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D YE0670 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D YE0667 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-dia minopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D YE3211 ddlA; D-alanine--D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D YE0674 ddlB; D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D YE0668 murF; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diami nopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D YE3279 uppS; undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D YE3678 bacA; putative bacitracin resistance protein K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D YE1476 putative permease K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D YE0669 mraY; phospho-N-acetylmuramoyl-pentapeptide-transfera se K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D YE0672 murG; UDP-N-acetylglucosamine:N-acetylmuramyl-(pentap eptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D YE3731 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D YE3979 mrcA; penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D YE0729 mrcB; penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D YE1067 pbpC; penicillin-binding protein K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D YE3002 pbpA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D YE1767 ftsI2; peptidoglycan synthetase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D YE0666 ftsI; penicillin-binding protein 3 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D YE3005 dacA; putative penicillin-binding protein 5 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D YE1471 dacC; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D YE0424 dacB; penicillin-binding protein 4 precursor K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
C 00552 Teichoic acid biosynthesis [PATH:yen00552]
D YE3678 bacA; putative bacitracin resistance protein K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D YE1476 putative permease K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D YE0169 rfe; putative undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:yen00543]
D YE0169 rfe; putative undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D YE0180 wecG; probable UDP-N-acetyl-D-mannosaminuronic acid transferase K02852 wecG; UDP-N-acetyl-D-mannosaminouronate:lipid I N-acetyl-D-mannosaminouronosyltransferase [EC:2.4.1.180]
D YE0178 conserved hypothetical protein K12582 wecF; dTDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase [EC:2.4.1.325]
D YE2482 hmsR; haemin storage system, HmsR protein K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
D YE2481 hmsS; haemin storage system, HmsS protein K11937 pgaD; biofilm PGA synthesis protein PgaD
D YE0082 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:yen00730]
D YE0293 thiC; thiamine biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D YE1088 thiD; putative phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D YE0291 thiF; thiamine biosynthesis protein K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
D YE1057 iscS; putative aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D YE3151 thiI; thiamine biosynthesis protein K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D YE0289 thiH; thiamine biosynthesis protein ThiH K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19]
D YE3155 dxs; 1-deoxy-D-xylulose 5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D YE0290 thiG; thiamine biosynthesis protein K03149 thiG; thiazole synthase [EC:2.8.1.10]
D YE3599 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D YE0292 thiE; thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D YE3158 thiL; thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D YE0368 conserved hypothetical protein K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D YE2068 phoA; alkaline phosphatase precursor K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D YE1704 conserved hypothetical protein K07251 thiK; thiamine kinase [EC:2.7.1.89]
D YE3089 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:yen00740]
D YE1965 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D YE3161 ribD; riboflavin biosynthesis protein RibD [includes: diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D YE2513 putative hydrolase K20861 ybjI; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104]
D YE0195 putative haloacid dehalogenase-like hydrolase K20862 yigB; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104]
D YE3669 ribB; 3,4-dihydroxy-2-butanone 4-phosphate synthase K02858 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12]
D YE3160 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D YE2162 ribE; riboflavin synthase alpha chain K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D YE0615 ribF; riboflavin biosynthesis protein (includes: riboflavin kinase and FMN adenyltransferase) K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D YE2600 probable histidine acid phosphatase K01093 appA; 4-phytase / acid phosphatase [EC:3.1.3.26 3.1.3.2]
D YE0266 fadI; NAD(P)H-flavin reductase K05368 fre; NAD(P)H-flavin reductase [EC:1.5.1.41]
D YE3599 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D YE3664 putative MutT-family protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D YE1723 conserved hypothetical protein K12152 nudJ; phosphatase NudJ [EC:3.6.1.-]
D YE1317 ubiX; probable 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:yen00750]
D YE2140 pdxH; pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D YE2138 pdxY; pyridoxamine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D YE3415 epd; D-erythrose 4-phosphate dehydrogenase K03472 epd; D-erythrose 4-phosphate dehydrogenase [EC:1.2.1.72]
D YE1307 pdxB; putative D-isomer specific 2-hydroxyacid dehydrogenase K03473 pdxB; erythronate-4-phosphate dehydrogenase [EC:1.1.1.290]
D YE1537 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D YE0631 pdxA; pyridoxal phosphate biosynthetic protein K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D YE1020 pdxJ; pyridoxal phosphate biosynthetic protein PdxJ K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D YE0602 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:yen00760]
D YE1009 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D YE2928 nadA; quinolinate synthetase A K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D YE0691 nadC; nicotinate-nucleotide pyrophosphorylase [carboxylating] K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D YE1565 pncB; putative nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D YE0574 deoD; purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D YE0580 nadR; transcriptional regulator NadR K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22]
D YE3066 ushA; UDP-sugar hydrolase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D YE0772 surE; stationary-phase survival protein K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D YE2982 nagD; putative N-acetylglucosamine metabolism protein K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D YE2999 nadD; putative nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D YE0745 conserved hypothetical protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D YE0296 conserved hypothetical protein K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D YE1038 nadE; putative glutamine-dependent NAD K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D YE0828 putative competence-damaged protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D YE2262 pncA; putative pyrazinamidase/nicotinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D YE1714 cobB; putative Sir2 family protein K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D YE0999 conserved hypothetical protein K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D YE0134 sthA; soluble pyridine nucleotide transhydrogenase K00322 sthA; NAD(P) transhydrogenase [EC:1.6.1.1]
D YE2078 pntA; NAD(P) transhydrogenase alpha subunit K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D YE2077 pntB; NAD(P) transhydrogenase subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D YE3793 gabD; succinate-semialdehyde dehydrogenase [NADP+] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:yen00770]
D YE2060 ilvB; putative acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D YE0658 ilvI; acetolactate synthase isozyme III large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D YE4017 budB; acetolactate synthase, catabolic K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D YE0148 ilvG; acetolactate synthase isozyme II large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D YE2061 ilvN; putative acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D YE0659 ilvH; acetolactate synthase isozyme III small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D YE0149 ilvM; acetolactate synthase isozyme II small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D YE0155 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D YE0151 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D YE0720 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D YE3149 apbA; 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D YE2669 putative ketopantoate reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D YE0719 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D YE0276 coaA; pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D YE0062 dfp; DNA/pantothenate metabolism flavoprotein K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D YE0745 conserved hypothetical protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D YE0067 coaD; phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D YE0685 conserved hypothetical protein K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D YE1021 acpS; holo-[acyl-carrier protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D YE3173 conserved hypothetical protein K08682 acpH; acyl carrier protein phosphodiesterase [EC:3.1.4.14]
D YE0150 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D YE0805 putative amino acid hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D YE0718 panD; aspartate 1-decarboxylase precursor K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:yen00780]
D YE2905 bioC; biotin synthesis protein BioC K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D YE0908 putative beta-ketoacyl-[ACP] synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D YE1287 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D YE1576 putative 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D YE0911 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D YE1637 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D YE0795 putative acyl-carrier-protein K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D YE1635 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YE0910 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YE2069 putative short chain dehydrogenease K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YE0798 putative acyl-carrier-protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YE3273 fabZ; (3R)-hydroxymyristoyl-(acyl carrier protein) dehydratase (EC 4.2.1.-) K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D YE3995 bioH; putative biotin biosynthesis protein K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85]
D YE2906 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D YE2908 bioA; adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D YE2024 bioD; putative dethiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D YE2904 bioD; dethiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D YE2907 bioB; biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D YE0275 birA; bifunctional protein BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D YE3330 bisC; putative biotin sulfoxide reductas2 K08351 bisC; biotin/methionine sulfoxide reductase [EC:1.-.-.-]
C 00785 Lipoic acid metabolism [PATH:yen00785]
D YE3007 lipB; lipoate-protein ligase B K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D YE3008 lipA; lipoic acid synthetase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D YE2184 lplA; putative lipoate-protein ligase A K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D YE0131 putative pyridine nucleotide-disulphide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YE0702 lpdA; dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YE0699 aceE; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D YE0701 aceF; dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D YE2944 sucA; 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D YE2943 sucB; dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D YE3391 gcvP; glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D YE3393 gcvT; aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D YE3392 gcsH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:yen00790]
D YE2818 folE; GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D YE2068 phoA; alkaline phosphatase precursor K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D YE2396 nudB; putative dATP pyrophosphohydrolase K08310 nudB; dihydroneopterin triphosphate diphosphatase [EC:3.6.1.67]
D YE3679 folB; putative dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D YE0722 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridi ne pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D YE0429 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D YE0626 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D YE1312 folC; putative FolC bifunctional protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D YE1965 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D YE3958 pabA; para-aminobenzoate synthase glutamine amidotransferase component II K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85]
D YE1781 pabB; para-aminobenzoate synthase component I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D YE1638 pabC; 4-amino-4-deoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D YE0754 ygcM; putative 6-pyruvoyl tetrahydrobiopterin synthase family protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D YE0753 conserved hypothetical protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D YE3127 conserved hypothetical protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D YE3295 conserved hypothetical protein K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D YE0055 metallo-beta-lactamase superfamily protein K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105]
D YE2899 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D YE2898 moaC; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D YE2896 moaE; molybdopterin [mpt] converting factor, subunit 2 K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D YE0605 mogA; molybdopterin biosynthesis protein K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D YE2828 moeA; molybdopterin biosynthesis protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D YE0017 mobA; molybdopterin-guanine dinucleotide biosynthesis protein A K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:yen00670]
D YE0626 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D YE1997 probable formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D YE3045 folD; putative FolD bifunctional protein K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D YE1047 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D YE1125 purN; putative phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D YE0303 purH; bifunctional purine biosynthesis protein PurH [includes: phosphoribosylaminoimidazolecarboxamide formyltransferase and IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D YE3890 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D YE3393 gcvT; aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D YE3875 metH; 5-Methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D YE3317 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D YE2247 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D YE0114 metF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D YE3399 putative 5-formyltetrahydrofolate cyclo-ligase-family protein K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:yen00860]
D YE1215 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D YE2432 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D YE0734 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D YE0263 hemB; delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D YE0187 hemC; porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D YE0186 hemD; uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D YE0297 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D YE1168 hemF; coproporphyrinogen III oxidase, aerobic HemF K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D YE0024 hemN; oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D YE0273 hemG; protoporphyrinogen oxidase K00230 hemG; menaquinone-dependent protoporphyrinogen oxidase [EC:1.3.5.3]
D YE3088 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D YE0185 hemX; putative uroporphyrin-III C-methyltransferase K02496 hemX; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D YE0761 cysG; siroheme synthase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D YE3968 cysG; siroheme synthase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D YE2748 cobA; putative uroporphyrin-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D YE4038 cobA; uroporphyrin-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D YE3145 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D YE2716 cbiK; cobalt chelatase K02190 cbiK; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D YE2715 cbiL; precorrin-2 C20-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151]
D YE2718 cbiH; precorrin-3 C17-methyltransferase K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272]
D YE2719a cbiF; precorrin-4 C11-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D YE2717 cbiJ; precorrin-6X reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106]
D YE2722 cbiD; conserved hypothetical protein K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195]
D YE2720 cbiT; precorrin-8W decarboxylase K02191 cbiT; cobalt-precorrin-6B (C15)-methyltransferase [EC:2.1.1.196]
D YE2721 cbiE; precorrin-6Y C5,15-methyltransferase [decarboxylating] K03399 cbiE; cobalt-precorrin-7 (C5)-methyltransferase [EC:2.1.1.289]
D YE2723 cbiC; precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D YE2725 cbiA; cobyrinic acid A,C-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D YE4035 btuR; cob(i)alamin adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D YE2205 btuR; cob(I)alamin adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D YE2711 cbiP; cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D YE2724 cbiB; putative membrane protein K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D YE2710 cobU; cobinamide kinase and guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D YE2709 cobS; cobalamin [5'-phosphate] synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D YE2707 cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D YE2750 pduX; putative GHMP kinase K16651 pduX; L-threonine kinase [EC:2.7.1.177]
D YE4039 pduX; PduX K16651 pduX; L-threonine kinase [EC:2.7.1.177]
D YE2749 cobD; putative L-threonine-O-3-phosphate decarboxylase K04720 cobD; threonine-phosphate decarboxylase [EC:4.1.1.81]
D YE3925 bfr; bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:yen00130]
D YE3859 ubiC; putative chorismate--pyruvate lyase K03181 ubiC; chorismate lyase [EC:4.1.3.40]
D YE3858 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D YE0265 conserved hypothetical protein K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D YE1317 ubiX; probable 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D YE3394 visC; putative monooxygenase K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240]
D YE1394 ubiG; 3-demethylubiquinone-9 3-methyltransferase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D YE3395 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D YE0256 ubiE; ubiquinone/menaquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D YE2984 ubiF; putative 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase K03184 ubiF; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60]
D YE1373 menF; menaquinone-specific isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D YE1375 menD; menaquinone biosynthesis protein K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D YE1376 conserved hypothetical protein K08680 menH; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [EC:4.2.99.20]
D YE1378 menC; putative O-succinylbenzoate-CoA synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D YE1379 menE; putative O-succinylbenzoic acid--CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D YE1377 menB; naphthoate synthase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D YE2173 conserved hypothetical protein K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D YE0103 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D YE1941 wrbA; trp repressor binding protein K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D YE1738 conserved hypothetical protein K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:yen00900]
D YE3155 dxs; 1-deoxy-D-xylulose 5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D YE3280 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D YE0769 ispD; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D YE2434 ipk; putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D YE0770 ispF; 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D YE1073 aarC; putative acetyltransferase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D YE0619 lytB; LytB protein K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D YE1317 ubiX; probable 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D YE3154 ispA; geranyltranstransferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D YE0417 ispB; octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D YE3279 uppS; undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation [PATH:yen00907]
D YE0268 fadB; fatty acid oxidation complex alpha subunit K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D YE1277 faoA; putative fatty oxidation complex alpha subunit,enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D YE1276 putative 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D YE0267 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D YE3416 tktA; transketolase 1 K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D YE0822 putative N-terminal region of transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D YE0823 C-terminal region of transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:yen00523]
D YE0174 rffH; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D YE0173 rffG; dTDP-D-glucose-4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D YE3085 wbcA; putative epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides [PATH:yen01053]
D YE1373 menF; menaquinone-specific isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D YE2642 putative phosphopantetheinyl transferase K02362 entD; enterobactin synthetase component D [EC:6.3.2.14 2.7.8.-]
D YE2612 ybtS; putative salicylate synthetase K04781 mbtI; salicylate synthetase [EC:5.4.4.2 4.2.99.21]
D YE2621 ybtE; yersiniabactin siderophore biosynthetic protein K04783 irp5; yersiniabactin salicyl-AMP ligase [EC:6.3.2.-]
D YE2617 irp2; yersiniabactin biosynthetic protein K04784 irp2; yersiniabactin nonribosomal peptide synthetase
D YE2619 ybtU; yersiniabactin biosynthetic protein YbtU K04785 irp3; yersiniabactin synthetase, thiazolinyl reductase component
D YE2618 irp1; yersiniabactin biosynthetic protein K04786 irp1; yersiniabactin nonribosomal peptide/polyketide synthase
C 01055 Biosynthesis of vancomycin group antibiotics
D YE0173 rffG; dTDP-D-glucose-4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D YE2019 blaA; beta-lactamase precursor K17836 penP; beta-lactamase class A [EC:3.5.2.6]
C 00332 Carbapenem biosynthesis [PATH:yen00332]
D YE3202 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D YE3201 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:yen00261]
D YE0763 cysN; sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D YE0762 cysD; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D YE3873 lysC; lysine-sensitive aspartokinase III K00928 lysC; aspartate kinase [EC:2.7.2.4]
D YE0600 thrA; bifunctional aspartokinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D YE0112 metL; bifunctional aspartokinase/homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D YE4018 asd; aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D YE1137 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D YE0620 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:yen00521]
D YE1225 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D YE2967 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D YE2054 putative inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D YE1054 suhB; putative inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D YE4026 idh; myo-inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D YE0174 rffH; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D YE0173 rffG; dTDP-D-glucose-4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D YE3085 wbcA; putative epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D YE1225 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:yen00525]
D YE0174 rffH; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D YE0173 rffG; dTDP-D-glucose-4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:yen00401]
D YE0851 tyrA; T-protein [includes: chorismate mutase and prephenate dehydrogenase] K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12]
D YE1561 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D YE2767 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D YE3847 tyrB; aromatic-amino-acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D YE2209 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D YE2210 trpG; anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D YE1634 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D YE1635 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YE0910 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YE2069 putative short chain dehydrogenease K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YE0798 putative acyl-carrier-protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D YE0899 putative acyl carrier protein K02078 acpP; acyl carrier protein
D YE1636 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D YE0898 putative acyl carrier protein K02078 acpP; acyl carrier protein
D YE0797 hypothetical protein K02078 acpP; acyl carrier protein
D YE3533 acpY; hypothetical protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:yen00999]
D YE3421 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D YE3884 aroE; shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:yen00362]
D YE1276 putative 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D YE0267 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D YE4064 putative tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D YE1277 faoA; putative fatty oxidation complex alpha subunit,enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D YE0268 fadB; fatty acid oxidation complex alpha subunit K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
C 00627 Aminobenzoate degradation [PATH:yen00627]
D YE1596 putative acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D YE1317 ubiX; probable 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00364 Fluorobenzoate degradation [PATH:yen00364]
D YE0250 putative carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00625 Chloroalkane and chloroalkene degradation [PATH:yen00625]
D YE2821 probable alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D YE2238 adhE; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:yen00361]
D YE0250 putative carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00623 Toluene degradation [PATH:yen00623]
D YE0250 putative carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00622 Xylene degradation
D YE4064 putative tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00633 Nitrotoluene degradation [PATH:yen00633]
D YE2152 NADH:flavin oxidoreductase / NADH oxidase family protein K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
D YE3034 NADH:flavin oxidoreductase / NADH oxidase family protein K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
D YE3606 hybC; hydrogenase-2 large chain precursor K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D YE3609 hyb0; hydrogenase-2 small chain precursor K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
C 00642 Ethylbenzene degradation
D YE1276 putative 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D YE0267 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation
C 00791 Atrazine degradation
D YE0953 ureC; urease alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D YE0952 ureB; urease beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5]
D YE0951 ureA; urease gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00930 Caprolactam degradation [PATH:yen00930]
D YE0268 fadB; fatty acid oxidation complex alpha subunit K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D YE1277 faoA; putative fatty oxidation complex alpha subunit,enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
D YE4064 putative tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00626 Naphthalene degradation [PATH:yen00626]
D YE2821 probable alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D YE2238 adhE; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:yen03020]
D YE0286 rpoB; DNA-directed RNA polymerase beta chain K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D YE0287 rpoC; DNA-directed RNA polymerase beta' chain K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D YE3898 rpoA; DNA-directed RNA polymerase alpha chain K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D YE0046 rpoZ; DNA-directed RNA polymerase, omega chain K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:yen03010]
D YE1540 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D YE3284 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D YE3917 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D YE3899 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D YE3906 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D YE0392 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D YE3929 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D YE3909 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D YE3740 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D YE3924 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D YE3900 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D YE3930 rpsl; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D YE3901 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D YE3910 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D YE0437 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D YE0843 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D YE3914 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D YE0394 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D YE3919 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D YE0613 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D YE3682 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D YE0282 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D YE3920 rplB; 50S ribosomal protein l2 K02886 RP-L2; large subunit ribosomal protein L2
D YE3923 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D YE3922 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D YE3911 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D YE3908 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D YE0284 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D YE0395 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D YE0283 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D YE0281 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D YE3741 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D YE3913 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D YE3904 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D YE3916 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D YE3897 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D YE3907 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D YE0846 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D YE1915 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D YE0418 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D YE3918 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D YE3921 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D YE3912 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D YE1422 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D YE0419 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D YE0064 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D YE3915 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D YE3905 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D YE0109 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D YE3107 ykgM; putative ribosomal protein K02909 RP-L31; large subunit ribosomal protein L31
D YE1631 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D YE0065 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D YE4175 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D YE1914 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D YE3902 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D YE3108 putative ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D 16S_rRNA-6 16S_rRNA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D 16S_rRNA-1 16S_rRNA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D 16S_rRNA-2 16S_rRNA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D 16S_rRNA-7 16S_rRNA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D 16S_rRNA-3 16S_rRNA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D 16S_rRNA-4 16S_rRNA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D 16S_rRNA-5 16S_rRNA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D 23S_rRNA-2 23S_rRNA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D 23S_rRNA-3 23S_rRNA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D 23S_rRNA-1 23S_rRNA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D 23S_rRNA-6 23S_rRNA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D 23S_rRNA-4 23S_rRNA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D 23S_rRNA-5 23S_rRNA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D 23S_rRNA-7 23S_rRNA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D 5S_rRNA-2 5S_rRNA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 5S_rRNA-1 5S_rRNA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 5S_rRNA-8 5S_rRNA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 5S_rRNA-6 5S_rRNA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 5S_rRNA-4 5S_rRNA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 5S_rRNA-3 5S_rRNA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 5S_rRNA-5 5S_rRNA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 5S_rRNA-7 5S_rRNA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:yen00970]
D tRNA-Ala-1 tRNA-Ala_(TGC); tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D tRNA-Ala-4 tRNA-Ala_(TGC); tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D tRNA-Ala-5 tRNA-Ala_(TGC); tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D tRNA-Ala-2 tRNA-Ala_(GGC); tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D tRNA-Ala-3 tRNA-Ala_(GGC); tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D tRNA-Arg-5 tRNA-Arg_(TCT); tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Arg-1 tRNA-Arg_(CCG); tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Arg-2 tRNA-Arg_(ACG); tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Arg-3 tRNA-Arg_(ACG); tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Arg-4 tRNA-Arg_(CCT); tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Asn-1 tRNA-Asn_(GTT); tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D tRNA-Asn-2 tRNA-Asn_(GTT); tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D tRNA-Asn-3 tRNA-Asn_(GTT); tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D tRNA-Asp-1 tRNA-Asp_(GTC); tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D tRNA-Asp-2 tRNA-Asp_(GTC); tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D tRNA-Asp-3 tRNA-Asp_(GTC); tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D tRNA-Cys tRNA-Cys_(GCA); tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D tRNA-Gln-3 tRNA-Gln_(CTG); tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D tRNA-Gln-1 tRNA-Gln_(TTG); tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D tRNA-Gln-2 tRNA-Gln_(TTG); tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D tRNA-Glu-1 tRNA-Glu_(TTC); tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D tRNA-Glu-2 tRNA-Glu_(TTC); tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D tRNA-Glu-3 tRNA-Glu_(TTC); tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D tRNA-Glu-4 tRNA-Glu_(TTC); tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D tRNA-Gly-7 tRNA-Gly_(CCC); tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-Gly-1 tRNA-Gly_(TCC); tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-Gly-5 tRNA-Gly_(TCC); tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-Gly-2 tRNA-Gly_(GCC); tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-Gly-3 tRNA-Gly_(GCC); tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-Gly-4 tRNA-Gly_(GCC); tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-Gly-6 tRNA-Gly_(GCC); tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-His tRNA-His_(GTG); tRNA-His K14226 tRNA-His; tRNA His
D tRNA-Ile-1 tRNA-Ile_(GAT); tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D tRNA-Ile-2 tRNA-Ile_(GAT); tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D tRNA-Ile-3 tRNA-Ile_(GAT); tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D tRNA-Leu-2 tRNA-Leu_(GAG); tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-7 tRNA-Leu_(TAG); tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-3 tRNA-Leu_(CAA); tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-1 tRNA-Leu_(CAG); tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-4 tRNA-Leu_(CAG); tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-5 tRNA-Leu_(CAG); tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-6 tRNA-Leu_(TAA); tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Lys-1 tRNA-Lys_(TTT); tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D tRNA-Lys-3 tRNA-Lys_(TTT); tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D tRNA-Lys-4 tRNA-Lys_(TTT); tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D tRNA-Lys-5 tRNA-Lys_(TTT); tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D tRNA-Lys-6 tRNA-Lys_(TTT); tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D tRNA-Lys-2 tRNA-Lys_(CTT); tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D tRNA-Met-7 tRNA-Met_(CAT); tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Met-1 tRNA-Met_(CAT); tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Met-2 tRNA-Met_(CAT); tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Met-3 tRNA-Met_(CAT); tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Met-4 tRNA-Met_(CAT); tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Met-5 tRNA-Met_(CAT); tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Met-6 tRNA-Met_(CAT); tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Phe-1 tRNA-Phe_(GAA); tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D tRNA-Phe-2 tRNA-Phe_(GAA); tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D tRNA-Pro-2 tRNA-Pro_(GGG); tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D tRNA-Pro-1 tRNA-Pro_(TGG); tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D tRNA-Pro-3 tRNA-Pro_(TGG); tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D tRNA-Ser-3 tRNA-Ser_(TGA); tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D tRNA-Ser-1 tRNA-Ser_(GCT); tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D tRNA-Ser-2 tRNA-Ser_(TGA); tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D tRNA-Ser-4 tRNA-Ser_(GGA); tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D tRNA-Ser-5 tRNA-Ser_(GGA); tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D tRNA-Thr-2 tRNA-Thr_(GGT); tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D tRNA-Thr-5 tRNA-Thr_(GGT); tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D tRNA-Thr-1 tRNA-Thr_(TGT); tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D tRNA-Thr-3 tRNA-Thr_(TGT); tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D tRNA-Thr-4 tRNA-Thr_(CGT); tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D tRNA-Trp tRNA-Trp_(CCA); tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D tRNA-Tyr-1 tRNA-Tyr_(GTA); tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D tRNA-Tyr-2 tRNA-Tyr_(GTA); tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D tRNA-Val-4 tRNA-Val_(GAC); tRNA-Val K14237 tRNA-Val; tRNA Val
D tRNA-Val-1 tRNA-Val_(TAC); tRNA-Val K14237 tRNA-Val; tRNA Val
D tRNA-Val-2 tRNA-Val_(TAC); tRNA-Val K14237 tRNA-Val; tRNA Val
D tRNA-Val-3 tRNA-Val_(TAC); tRNA-Val K14237 tRNA-Val; tRNA Val
D tRNA-Val-5 tRNA-Val_(GAC); tRNA-Val K14237 tRNA-Val; tRNA Val
D tRNA-Val-6 tRNA-Val_(GAC); tRNA-Val K14237 tRNA-Val; tRNA Val
D tRNA-Sec tRNA-SelC(p)_(TCA); tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D YE1215 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D YE2977 glnS; glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D YE0834 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D YE2397 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D YE1564 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D YE4151 glyQ; glycyl-tRNA synthetase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D YE4150 glyS; glycyl-tRNA synthetase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D YE1912 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D YE1528 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D YE4131 selA; L-seryl-tRNA selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D YE3780 possible L-seryl-tRNA selenocysteine synthase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D YE3048 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D YE2785 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D YE3890 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D YE0498 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D YE2996 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D YE0616 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D YE3374 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D YE2406 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D YE3258 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D YE1074 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D YE1916 pheS; phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D YE1917 pheT; phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D YE2139 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D YE3969 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:yen03060]
D YE3903 secY; preprotein translocase SecY subunit K03076 secY; preprotein translocase subunit SecY
D YE0279 secE; preprotein translocase SecE subunit K03073 secE; preprotein translocase subunit SecE
D YE0431 secG; protein-export membrane protein K03075 secG; preprotein translocase subunit SecG
D YE3164 secD; protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D YE3163 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D YE3165 putative membrane protein K03210 yajC; preprotein translocase subunit YajC
D YE4177 yidC; probable membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D YE0681 secA; preprotein translocase SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D YE0080 secB; protein-export protein K03071 secB; preprotein translocase subunit SecB
D YE0680 putative exported protein K13301 secM; secretion monitor
D YE0842 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D misc_RNA.29 ffs; Signal recognition particle (SRP) RNA (RF00169) as predicted by Rfam, score 92.61, positions 1 to 100 K01983 ffs; SRP RNA
D YE0225 ftsY; cell division protein K03110 ftsY; fused signal recognition particle receptor
D YE3473 arsA2; arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D YE0259 tatA; Sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D YE0260 tatB; Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D YE0261 tatC; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D YE3009 tatE; sec-independent protein translocase protein K03425 tatE; sec-independent protein translocase protein TatE
D YE1016 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D YE0617 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:yen04122]
D YE1057 iscS; putative aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D YE2868 putative sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D YE0217 conserved hypothetical protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D YE3931 conserved hypothetical protein K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D YE3932 conserved hypothetical protein K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D YE3933 conserved hypothetical protein K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D YE1597 putative sulfite reductase subunit protein K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D YE1722 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D YE2896 moaE; molybdopterin [mpt] converting factor, subunit 2 K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D YE2899 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D YE2897 moaD; molybdopterin [mpt] converting factor, subunit 1 K03636 moaD; sulfur-carrier protein
D YE2829 moeB; molybdopterin biosynthesis protein K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D YE2898 moaC; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D YE0605 mogA; molybdopterin biosynthesis protein K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D YE3151 thiI; thiamine biosynthesis protein K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D YE0290A thiS; thiamine biosynthesis protein K03154 thiS; sulfur carrier protein
D YE0291 thiF; thiamine biosynthesis protein K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
C 03050 Proteasome
C 03018 RNA degradation [PATH:yen03018]
D YE3320 conserved hypothetical protein K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D YE1627 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D YE0166 rhlB; putative DEAD-box helicase K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D YE0747 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D YE0438 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D YE2889 rhlE; putative ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D YE0384 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D YE0440 deaD; cold-shock dead-box protein A K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D YE0204 recQ; ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D YE0168 rho; transcription termination factor K03628 rho; transcription termination factor Rho
D YE0089 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D YE0609 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D YE0354 groEL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D YE0377 ymr; yersinia multiple regulator K03666 hfq; host factor-I protein
D YE1120 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D YE0723 pcnB; poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:yen03030]
D YE1794 holE; DNA polymerase III, theta subunit K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D YE0922 dnaQ; DNA polymerase III, epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D YE3269 dnaE; DNA polymerase III, alpha chain K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D YE3093 dnaX; DNA polymerase III subunit Tau (contains DNA polymerase III subunit Gamma) K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D YE1641 holB; DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D YE2998 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D YE0562 holD; DNA polymerase III, psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D YE0499 holC; DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D YE4172 dnaN; DNA polymerase III, beta subunit protein K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D YE3514 dnaB2; putative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D YE3849 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D YE3683 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D YE3844 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D YE0921 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D YE3270 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D YE0021 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D YE0048 putative DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D YE1211 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:yen03410]
D YE1987 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D YE1002 ung; putative uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D YE3443 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D YE0066 mutM; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D YE2529 putative glycosidase K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D YE4152 tag; DNA-3-methyladenine glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D YE2254 xthA; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D YE1455 nfo; endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D YE0021 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D YE3378 recJ; single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D YE0048 putative DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D YE1211 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:yen03420]
D YE1709 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D YE3845 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D YE2902 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D YE1830 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D YE0196 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D YE0021 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D YE0048 putative DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D YE1211 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:yen03430]
D YE0776 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D YE0375 mutL; DNA mismatch repair protein K03572 mutL; DNA mismatch repair protein MutL
D YE3322 mutH; DNA mismatch repair protein K03573 mutH; DNA mismatch repair protein MutH
D YE0196 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D YE2758 sbcB; exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D YE1080 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D YE3153 xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D YE1790 exoX; putative exodeoxyribonuclease K10857 exoX; exodeoxyribonuclease X [EC:3.1.11.-]
D YE2355 exodeoxyribonuclease K10857 exoX; exodeoxyribonuclease X [EC:3.1.11.-]
D YE3378 recJ; single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D YE3844 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D YE3269 dnaE; DNA polymerase III, alpha chain K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D YE4172 dnaN; DNA polymerase III, beta subunit protein K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D YE3093 dnaX; DNA polymerase III subunit Tau (contains DNA polymerase III subunit Gamma) K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D YE2998 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D YE1641 holB; DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D YE0922 dnaQ; DNA polymerase III, epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D YE1794 holE; DNA polymerase III, theta subunit K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D YE0499 holC; DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D YE0562 holD; DNA polymerase III, psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D YE0048 putative DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D YE1211 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D YE3972 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:yen03440]
D YE3378 recJ; single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D YE3844 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D YE4171 recF; DNA metabolism protein K03629 recF; DNA replication and repair protein RecF
D YE1019 recO; DNA repair protein K03584 recO; DNA repair protein RecO (recombination protein O)
D YE3091 recR; recombination protein RecR K06187 recR; recombination protein RecR
D YE0829 recA; RecA protein K03553 recA; recombination protein RecA
D YE0021 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D YE2393 ruvA; Holliday junction DNA helicase K03550 ruvA; holliday junction DNA helicase RuvA
D YE2392 ruvB; Holliday junction DNA helicase K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D YE2394 ruvC; crossover junction endodeoxyribonuclease K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D YE0043 recG; ATP-dependent DNA helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D YE3310 recB; exodeoxyribonuclease V beta chain K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D YE3312 recC; exodeoxyribonuclease V gamma chain K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D YE3309 recD; exodeoxyribonuclease V alpha chain K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D YE3269 dnaE; DNA polymerase III, alpha chain K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D YE4172 dnaN; DNA polymerase III, beta subunit protein K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D YE3093 dnaX; DNA polymerase III subunit Tau (contains DNA polymerase III subunit Gamma) K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D YE2998 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D YE1641 holB; DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D YE0922 dnaQ; DNA polymerase III, epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D YE1794 holE; DNA polymerase III, theta subunit K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D YE0499 holC; DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D YE0562 holD; DNA polymerase III, psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D YE0108 priA; primosomal protein n' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D YE0393 priB; primosomal replication protein n K02686 priB; primosomal replication protein N
D YE3095 priC; primosomal replication protein n'' K04067 priC; primosomal replication protein N''
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:yen03250]
D YE3960 ppiA; peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:yen02010]
D YE1194 cysP; thiosulfate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D YE0091 sbp1; exported sulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D YE1195 cysT; sulfate transport system permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D YE1196 cysW; sulfate transport system permease protein CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D YE1197 cysA; sulfate transport ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D YE3948 tauA; putative taurine-binding periplasmic protein precursor K15551 tauA; taurine transport system substrate-binding protein
D YE3946 tauC; putative taurine transport system permease protein K15552 tauC; taurine transport system permease protein
D YE3947 tauB; putative taurine transport ATP-binding protein K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]
D YE2913 modA; molybdate-binding periplasmic protein precursor K02020 modA; molybdate transport system substrate-binding protein
D YE2912 modB; molybdenum transport system permease protein ModB K02018 modB; molybdate transport system permease protein
D YE2911 modC; molybdenum transport ATP-binding protein ModC K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D YE2915 modF; putative molybdenum transport ATP-binding protein modF K05776 modF; molybdate transport system ATP-binding protein
D YE1241 yfuA; iron(III)-binding periplasmic protein K02012 afuA; iron(III) transport system substrate-binding protein
D YE2659 extracellular solute-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D YE1240 yfuB; iron(III)-transport system permease K02011 afuB; iron(III) transport system permease protein
D YE2660 putative binding protein-dependent transport system, inner-membrane component K02011 afuB; iron(III) transport system permease protein
D YE2661 ferric transport ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D YE1239 yfuC; iron(III)-transport ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D YE0642 tbpA; thiamine-binding periplasmic protein K02064 thiB; thiamine transport system substrate-binding protein
D YE0641 thiP; thiamine transport system permease protein K02063 thiP; thiamine transport system permease protein
D YE0640 thiQ; thiamine transport ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D YE1484 potF; putrescine-binding periplasmic protein precursor K11073 potF; putrescine transport system substrate-binding protein
D YE1487 potI; putrescine transport system permease protein K11074 potI; putrescine transport system permease protein
D YE1486 potH; putrescine transport system permease protein K11075 potH; putrescine transport system permease protein
D YE1485 potG; putrescine transport ATP-binding protein K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D YE0923 proX; glycine betaine-binding periplasmic protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D YE0924 proW; glycine betaine/L-proline transport system permease K02001 proW; glycine betaine/proline transport system permease protein
D YE0925 proV; glycine betaine/L-proline transport ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D YE2865 putative substrate-binding transport protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D YE2862 putative ABC transport integral membrane subunit K05846 opuBD; osmoprotectant transport system permease protein
D YE2864 putative ABC transport integral membrane subunit K05846 opuBD; osmoprotectant transport system permease protein
D YE2863 putative ABC transport ATP-binding subunit K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D YE3866 malE; maltose-binding periplasmic protein precursor K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D YE3867 malF; maltose transport system permease protein MalF K10109 malF; maltose/maltodextrin transport system permease protein
D YE3868 malG; maltose transport system permease protein MalG K10110 malG; maltose/maltodextrin transport system permease protein
D YE3863 malK; maltose/maltodextrin transport ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D YE0463 putative sugar ABC transporter, ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D YE1882 putative sugar-binding protein K10192 togB; oligogalacturonide transport system substrate-binding protein
D YE1885 putative ABC sugar transporter (permease) K10193 togM; oligogalacturonide transport system permease protein
D YE1884 putative sugar ABC transporter (permease) K10194 togN; oligogalacturonide transport system permease protein
D YE1883 putative sugar ABC transporter K10195 togA; oligogalacturonide transport system ATP-binding protein
D YE3749 yrbC; putative exported protein K07323 mlaC; phospholipid transport system substrate-binding protein
D YE1249 putative exported protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D YE3750 yrbD; putative membrane protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D YE1247 ABC transporter, membrane permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D YE3751 yrbE; putative membrane protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D YE3748 putative anti-sigma B factor antagonist K07122 mlaB; phospholipid transport system transporter-binding protein
D YE1248 ABC transporter, ATP-binding component K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D YE3752 yrbF; putative ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D YE0011 rbsB; putative D-ribose-binding periplasmic protein precursor K10439 rbsB; ribose transport system substrate-binding protein
D YE2609 ABC transporter, substrate binding component K10439 rbsB; ribose transport system substrate-binding protein
D YE0010 rbsC; putative sugar transport system, permease protein K10440 rbsC; ribose transport system permease protein
D YE2607 putative membrane permease protein K10440 rbsC; ribose transport system permease protein
D YE2606 putative sugar permease K10440 rbsC; ribose transport system permease protein
D YE0009 rbsA; putative ribose transport ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D YE2608 putative sugar transport, ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D YE0008 ribose permease K06726 rbsD; D-ribose pyranase [EC:5.4.99.62]
D YE2003 araF; L-arabinose-binding periplasmic protein precursor K10537 araF; L-arabinose transport system substrate-binding protein
D YE2005 araH; L-arabinose transport system permease protein K10538 araH; L-arabinose transport system permease protein
D YE2004 araG; L-arabinose transport ATP-binding protein K10539 araG; L-arabinose transport system ATP-binding protein [EC:7.5.2.12]
D YE0141 putative periplasmic protein precursor K23508 ytfQ; galactofuranose transport system substrate-binding protein
D YE0144 putative sugar transport system permease K23509 ytfT; galactofuranose transport system permease protein
D YE0143 putative sugar transport system permease K23509 ytfT; galactofuranose transport system permease protein
D YE0142 putative sugar transport system ATP-binding protein K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9]
D YE2815 mglB; galactose-binding protein K10540 mglB; methyl-galactoside transport system substrate-binding protein
D YE2813 mglC; galactoside permease K10541 mglC; methyl-galactoside transport system permease protein
D YE2814 mglA; galactoside transport ATP-binding protein K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11]
D YE4121 sugar-binding periplasmic protein K10543 xylF; D-xylose transport system substrate-binding protein
D YE4119 sugar transport system permease protein K10544 xylH; D-xylose transport system permease protein
D YE4120 sugar transport ATP-binding protein K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10]
D YE0818 putative sugar ABC transporter, periplasmic protein K17202 eryG; erythritol transport system substrate-binding protein
D YE0821 rbsC; putative sugar ABC transporter, permease protein K17203 eryF; erythritol transport system permease protein
D YE0820 putative sugar ABC transporter, ATP-binding protein K17204 eryE; erythritol transport system ATP-binding protein
D YE0241 ugpB; glycerol-3-phosphate-binding periplasmic protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D YE0242 ugpA; sn-glycerol-3-phosphate transport system,permease protein K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D YE0243 ugpE; sn-glycerol-3-phosphate transport system,permease protein K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D YE0244 ugpC; sn-glycerol-3-phosphate transport, ATP-binding protein K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D YE4201 pstS; putative phosphate-binding periplasmic protein K02040 pstS; phosphate transport system substrate-binding protein
D YE4200 pstC; putative phosphate transport system permease K02037 pstC; phosphate transport system permease protein
D YE4199 pstA; putative phosphate transport system permease K02038 pstA; phosphate transport system permease protein
D YE4198 pstB; putative phosphate transport ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D YE2877 putative substrate-binding periplasmic transport protein K02044 phnD; phosphonate transport system substrate-binding protein
D YE2875 putative ABC transport membrane permease K02042 phnE; phosphonate transport system permease protein
D YE2876 putative ABC transport membrane permease K02042 phnE; phosphonate transport system permease protein
D YE2878 putative ABC transport ATP-binding subunit K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D YE1320 hisM; histidine transport system permease protein HisM K10015 hisM; histidine transport system permease protein
D YE1319 hisQ; histidine transport system permease protein HisQ K10016 hisQ; histidine transport system permease protein
D YE2043 amino acid transport system permease protein K10016 hisQ; histidine transport system permease protein
D YE1321 hisP; histidine transport ATP-binding protein HisP K10017 hisP; histidine transport system ATP-binding protein [EC:7.4.2.1]
D YE1318 hisJ; histidine-binding periplasmic protein K10014 hisJ; histidine transport system substrate-binding protein
D YE2044 amino acid-binding periplasmic protein precursor K10014 hisJ; histidine transport system substrate-binding protein
D YE2845 glnH; putative glutamine-binding periplasmic protein K10036 glnH; glutamine transport system substrate-binding protein
D YE2846 glnP; putative glutamine transport system permease K10037 glnP; glutamine transport system permease protein
D YE2847 glnQ; putative glutamine transport ATP-binding protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D YE1491 artJ; arginine-binding periplasmic protein 2 precursor K09996 artJ; arginine transport system substrate-binding protein
D YE1495 artI; arginine-binding periplasmic protein 1 precursor K09997 artI; arginine transport system substrate-binding protein
D YE1493 artM; arginine transport system permease protein K09998 artM; arginine transport system permease protein
D YE1494 artQ; arginine transport system permease protein K09999 artQ; arginine transport system permease protein
D YE1496 artP; arginine transport ATP-binding protein K10000 artP; arginine transport system ATP-binding protein [EC:7.4.2.1]
D YE2991 glnH; putative amino acid-binding protein precursor K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D YE2993 gltK; putative glutamate/aspartate transport system permease K10002 gltK; glutamate/aspartate transport system permease protein
D YE2992 gltJ; putative glutamate/aspartate transport system permease K10003 gltJ; glutamate/aspartate transport system permease protein
D YE2994 gltL; putative glutamate/aspartate transport ATP-binding protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D YE3833 Putative ABC transporter periplasmic solute binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein
D YE3834 Putative ABC transporter permease K09970 aapQ; general L-amino acid transport system permease protein
D YE3835 Putative ABC transporter permease protein K09971 aapM; general L-amino acid transport system permease protein
D YE3836 Putative ATP-binding component of an ABC transporter K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D YE2516 fliY; putative cystine-binding periplasmic protein K02424 tcyA; L-cystine transport system substrate-binding protein
D YE2515 yecS; putative amino-acid ABC transporter (permease) K10009 tcyB; L-cystine transport system permease protein
D YE2514 yecC; putative amino-acid ABC transporter (ATP-binding protein) K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D YE0230 livK; branched-chain amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D YE0231 livH; high-affinity branched-chain amino acid transport system, permease protein K01997 livH; branched-chain amino acid transport system permease protein
D YE0232 livM; high-affinity branched-chain amino acid transport system, permease protein K01998 livM; branched-chain amino acid transport system permease protein
D YE0233 livG; high-affinity branched-chain amino acid transport, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D YE0234 livF; high-affinity branched-chain amino acid transport, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D YE1466 putative exported protein K02073 metQ; D-methionine transport system substrate-binding protein
D YE3255 putative lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D YE4180 Possible component of an ABC transporter system K02073 metQ; D-methionine transport system substrate-binding protein
D YE1468 putative ABC transport integral membrane subunit K02072 metI; D-methionine transport system permease protein
D YE3254 ABC transporter permease protein K02072 metI; D-methionine transport system permease protein
D YE4182 Putative ABC transport permease component K02072 metI; D-methionine transport system permease protein
D YE3253 abc; ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D YE4181 Putative ABC transport family protein K02071 metN; D-methionine transport system ATP-binding protein
D YE1467 putative ABC transport ATP-binding subunit K02071 metN; D-methionine transport system ATP-binding protein
D YE2873 putative substrate-binding periplasmic transport protein K11959 urtA; urea transport system substrate-binding protein
D YE2872 putative Branched-chain amino acid transport system, permease component K11960 urtB; urea transport system permease protein
D YE2871 putative Branched-chain amino acid transport system, permease component K11961 urtC; urea transport system permease protein
D YE2870 putative ABC transport ATP-binding subunit K11962 urtD; urea transport system ATP-binding protein
D YE2869 putative ABC transport ATP-binding subunit K11963 urtE; urea transport system ATP-binding protein
D YE2903 putative amino acid transporter K11963 urtE; urea transport system ATP-binding protein
D YE2233 oppA; periplasmic oligopeptide-binding protein precursor K15580 oppA; oligopeptide transport system substrate-binding protein
D YE2110 mppA; putative periplasmic murein peptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D YE2234 oppA2; periplasmic oligopeptide-binding protein precursor K15580 oppA; oligopeptide transport system substrate-binding protein
D YE2232 oppB; oligopeptide transport system permease protein K15581 oppB; oligopeptide transport system permease protein
D YE2231 oppC; oligopeptide transport system permease protein K15582 oppC; oligopeptide transport system permease protein
D YE2230 oppD; oligopeptide transport ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D YE2229 oppF; oligopeptide transport ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D YE4083 dppA; periplasmic dipeptide transport protein K12368 dppA; dipeptide transport system substrate-binding protein
D YE4082 dppB; dipeptide transport system permease protein K12369 dppB; dipeptide transport system permease protein
D YE4081 dppC; dipeptide transport system permease protein K12370 dppC; dipeptide transport system permease protein
D YE4080 dppD; dipeptide transport ATP-binding protein K12371 dppD; dipeptide transport system ATP-binding protein
D YE4079 dppF; dipeptide transport ATP-binding protein K12372 dppF; dipeptide transport system ATP-binding protein
D YE2125 sapA; peptide transport periplasmic protein precursor K19226 sapA; cationic peptide transport system substrate-binding protein
D YE2126 sapB; peptide transport system permease protein K19227 sapB; cationic peptide transport system permease protein
D YE2127 sapC; peptide transport system permease protein K19228 sapC; cationic peptide transport system permease protein
D YE2128 sapD; peptide transport system ATP-binding protein K19229 sapD; cationic peptide transport system ATP-binding protein
D YE2129 sapF; peptide transport system ATP-binding protein K19230 sapF; cationic peptide transport system ATP-binding protein
D YE1430 putative substrate-binding transport protein K13893 yejA; microcin C transport system substrate-binding protein
D YE1429 putative ABC transporter integral membrane subunit K13894 yejB; microcin C transport system permease protein
D YE1428 putative ABC transporter integral membrane subunit K13895 yejE; microcin C transport system permease protein
D YE1427 putative ABC transporter ATP-binding subunit K13896 yejF; microcin C transport system ATP-binding protein
D YE3618 fepB; Ferrienterobactin-periplasmic binding protein K23185 fepB; ferric enterobactin transport system substrate-binding protein
D YE3619 fepD; ferric enterobactin transport system permease protein K23186 fepD; iron-siderophore transport system permease protein
D YE3620 fepG; iron-siderophore transport system, membrane permease component K23187 fepG; iron-siderophore transport system permease protein
D YE3621 fepC; iron-siderophore transport system, ATP-binding component K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D YE0731 fhuD; ferrichrome-binding periplasmic protein precursor K23227 fhuD; ferric hydroxamate transport system substrate-binding protein
D YE0732 fhuB; ferrichrome transport system permease protein FhuB K23228 fhuB; ferric hydroxamate transport system permease protein
D YE0730 fhuC; ferrichrome transport ATP-binding protein FhuC K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16]
D YE0738 yadT; putative priplasmic metal binding protein K06858 btuF; vitamin B12 transport system substrate-binding protein
D YE2195 btuC; putative vitamin B12 transport system permease protein K06073 btuC; vitamin B12 transport system permease protein
D YE2193 btuD; putative vitamin B12 transport ATP-binding protein K06074 btuD; vitamin B12 transport system ATP-binding protein [EC:7.6.2.8]
D YE2388 znuA; exported high-affinity zinc uptake system protein K09815 znuA; zinc transport system substrate-binding protein
D YE2390 znuB; high-affinity zinc uptake system membrane protein K09816 znuB; zinc transport system permease protein
D YE2389 znuC; high-affinity zinc uptake system ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D YE1900 periplasmic-binding protein K11604 sitA; manganese/iron transport system substrate-binding protein
D YE1898 chelated iron transport system membrane protein K11605 sitC; manganese/iron transport system permease protein
D YE1897 chelated iron transport system membrane protein K11606 sitD; manganese/iron transport system permease protein
D YE1899 ATP-binding transport protein K11607 sitB; manganese/iron transport system ATP-binding protein
D YE2714A cbiN; cobalt transport protein cbiN K02009 cbiN; cobalt/nickel transport protein
D YE2714 cbiM; putative membrane protein K02007 cbiM; cobalt/nickel transport system permease protein
D YE2713 cbiQ; putative cobalt transport protein K02008 cbiQ; cobalt/nickel transport system permease protein
D YE2712 cbiO; putative cobalt transport ATP-binding protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D YE0525 putative periplasmic solute-binding protein K10555 lsrB; AI-2 transport system substrate-binding protein
D YE0527 putative ABC transporter permease protein K10556 lsrC; AI-2 transport system permease protein
D YE0526 putative ABC transporter permease protein K10557 lsrD; AI-2 transport system permease protein
D YE0528 putative ABC transporter ATP-binding protein K10558 lsrA; AI-2 transport system ATP-binding protein
D YE1710 lolC; lipoprotein releasing system, transmembrane protein K09808 lolC_E; lipoprotein-releasing system permease protein
D YE1712 lolE; lipoprotein releasing system, transmembrane protein K09808 lolC_E; lipoprotein-releasing system permease protein
D YE1711 lolD; lipoprotein releasing system, ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D YE1266 ccmD; putative heme exporter protein D K02196 ccmD; heme exporter protein D
D YE1265 ccmC; putative heme exporter protein C K02195 ccmC; heme exporter protein C
D YE1264 ccmB; heme exporter protein B K02194 ccmB; heme exporter protein B
D YE1263 ccmA; putative heme exporter protein A K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D YE0501 putative membrane protein K07091 lptF; lipopolysaccharide export system permease protein
D YE0502 putative membrane protein K11720 lptG; lipopolysaccharide export system permease protein
D YE3758 yhbG; probable ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D YE0227 ftsX; cell division protein K09811 ftsX; cell division transport system permease protein
D YE0226 ftsE; cell division ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein
D YE2615 ybtP; lipoprotein inner membrane ABC-transporter K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D YE2614 ybtQ; inner membrane ABC-transporter YbtQ K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D YE1543 msbA; probable transport ATP-binding protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D YE3122 mdlA; probable ABC transporter (ATP-binding protein) K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D YE3121 mdlB; probable ATP transporter (ATP-binding protein) K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D YE1696 putative ABC transport protein, ATP-binding component K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D YE3019 putative ABC transport protein K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D YE0127 ABC transporter protein K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D YE1521 cydC; transport ATP-binding protein K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D YE1522 cydD; transport ATP-binding protein K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D YE1515 putative ABC transporter ATP-binding protein K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D YE1199 putative ABC transporter, ATP-binding protein K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D YE0793 ABC transporter, ATP-binding component K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D YE0319 putative membrane transport protein ATP-binding component K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS) [PATH:yen02060]
D YE1206 ptsI; PTS sytem, enzyme I component K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D YE1207 ptsH; PTS system, phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D YE1205 crr; PTS system, glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D YE1643 ptsG; PTS system, glucose-specific IIBC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D YE2978 nagE; pts system, N-acetylglucosamine-specific IIABC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D YE2011 malX; PTS system, maltose and glucose-specific IIabc component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D YE0552 scrA; PTSsystem, sucrose-specific IIbc component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D YE1416 Putative PTS-system permease K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D YE2104 arbF; PTS system beta-glucoside-specific IIabc component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D YE1256 ascF; PTS transport protein K02753 ascF; beta-glucoside (arbutin/salicin/cellobiose) PTS system EIICB component [EC:2.7.1.-]
D YE3199 aglA; PTS system, alpha-glucoside-specific IIBC component K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-]
D YE3774 treB; PTS system, trehalose-specific IIBC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D YE3690 photransferase system, IIBC component K11192 murP; N-acetylmuramic acid PTS system EIICB component [EC:2.7.1.192]
D YE4148 mtlA; PTS system, mannitol-specific IIABC component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D YE0970 celC; PTS system, cellobiose-specific IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D YE1291 putative PTS system protein K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D YE4105 Putative phosphotransferase protein K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D YE4103 pts system, cellobiose-specific IIb component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D YE0967 celA; PTS system, cellobiose-specific IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D YE1294 putative exported PTS system protein K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D YE4104 Putative phosphotransferase protein K02761 celB; cellobiose PTS system EIIC component
D YE0968 celB; PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D YE1293 putative PTS system protein K02761 celB; cellobiose PTS system EIIC component
D YE4102 Putative cellobiose-specific phosphotransferase K02761 celB; cellobiose PTS system EIIC component
D YE1777 manX; PTS system, mannose-specific IIAB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D YE1776 manY; PTS system, mannose-specific IIC component K02795 manY; mannose PTS system EIIC component
D YE1775 manZ; PTS system, mannose-specific IID component K02796 manZ; mannose PTS system EIID component
D YE0814 sorF; sorbose-specific PTS uptake system component K02812 sorF; sorbose PTS system EIIA component [EC:2.7.1.206]
D YE0813 sorB; sorbose-specific PTS uptake system component K02813 sorB; sorbose PTS system EIIB component [EC:2.7.1.206]
D YE0812 sorA; sorbose-specific PTS uptake system component K02814 sorA; sorbose PTS system EIIC component
D YE0811 sorM; sorbose-specific PTS uptake system, component K02815 sorM; sorbose PTS system EIID component
D YE1096 gutB; pts system, glucitol/sorbitol-specific iia component K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D YE1097 gutE; pts system, glucitol/sorbitol-specific iibc component K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D YE1098 gutA; pts system, glucitol/sorbitol-specific iic2 component K02783 srlA; glucitol/sorbitol PTS system EIIC component
D YE1330 phosphotransferase enzyme II, A component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D YE1329 phosphotransferase enzyme II, B component K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D YE1328 putative membrane protein K03475 ulaA; ascorbate PTS system EIIC component
D YE1447 fruB; fructose-specific pts system component IIa K11183 fruB; multiphosphoryl transfer protein [EC:2.7.1.202]
D YE1449 fruA; PTS system, fructose-specific IIBC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D YE1448 fruK; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D YE3319 ptsP; phosphoenolpyruvate-protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D YE3763 ptsO; putative phosphocarrier protein K08485 ptsO; phosphocarrier protein NPr
D YE3761 ptsN; nitrogen regulatory IIA protein K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:yen03070]
D YE3665 hasF; ABC-transporter outer membrane component K12340 tolC; outer membrane protein
D YEP0041 yscF; putative type III secretion protein K03221 yscF; type III secretion protein F
D YEP0025 yscO; type III secretion system translocation protein K04056 yscO; type III secretion protein O
D YEP0026 yscP; putative type III secretion protein K04057 yscP; type III secretion protein P
D YEP0020 yscX; conserved hypothetical protein K04059 yscX; type III secretion protein X
D YEP0038 yscC; putative type III secretion protein K03219 yscC; type III secretion protein C
D YEP0023 yopN; type III secretion outer membrane protein K04058 yscW; type III secretion protein W
D YEP0045 yscJ; type III secretion lipoprotein K03222 yscJ; type III secretion protein J
D YEP0028 yscR; putative type III secretion protein K03226 yscR; type III secretion protein R
D YEP0029 yscS; putative type III secretion protein K03227 yscS; type III secretion protein S
D YEP0030 yscT; putative type III secretion protein K03228 yscT; type III secretion protein T
D YEP0031 yscU; putative type III secretion protein K03229 yscU; type III secretion protein U
D YE3546 ysaV; type III secretion system apparatus protein K03230 yscV; type III secretion protein V
D YEP0018 lcrD; low calcium response locus membrane protein d K03230 yscV; type III secretion protein V
D YEP0024 yscN; probable type III secretion system ATP synthase K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8]
D YE3542A ysaQ; type III secretion apparatus protein K03225 yscQ; type III secretion protein Q
D YEP0027 yscQ; putative type III secretion protein K03225 yscQ; type III secretion protein Q
D YEP0047 yscL; putative type III secretion protein K03223 yscL; type III secretion protein L
D YE3565 general secretion pathway protein D K02453 gspD; general secretion pathway protein D
D YE3349 outD; general secretion pathway protein D K02453 gspD; general secretion pathway protein D
D YE3575 yst1S; putative secretion protein K02465 gspS; general secretion pathway protein S
D YE3564 yst1C; general secretion pathway protein C K02452 gspC; general secretion pathway protein C
D YE3350 outC; general secretion pathway protein C K02452 gspC; general secretion pathway protein C
D YE3567 yst1F; general secretion pathway protein F K02455 gspF; general secretion pathway protein F
D YE3347 outF; general secretion pathway protein K02455 gspF; general secretion pathway protein F
D YE3568 yst1G; general secretion pathway protein G precursor K02456 gspG; general secretion pathway protein G
D YE3346 outG; general secretion pathway protein G K02456 gspG; general secretion pathway protein G
D YE3569 yst1H; general secretion pathway protein H K02457 gspH; general secretion pathway protein H
D YE3570 yst1I; general secretion pathway protein I precursor K02458 gspI; general secretion pathway protein I
D YE3345 outI; general secretion pathway protein I K02458 gspI; general secretion pathway protein I
D YE3570a yst1J; putative general secretion pathway protein J precursor K02459 gspJ; general secretion pathway protein J
D YE3344A outJ; general secretion pathway protein J precursor K02459 gspJ; general secretion pathway protein J
D YE3571 yst1K; putative general secretion pathway protein K K02460 gspK; general secretion pathway protein K
D YE3344 outK; general secretion pathway protein K K02460 gspK; general secretion pathway protein K
D YE3572 yst1L; putative general secretion pathway protein L K02461 gspL; general secretion pathway protein L
D YE3343 outL; general secretion pathway protein L K02461 gspL; general secretion pathway protein L
D YE3573 yst1M; putative general secretion pathway protein M K02462 gspM; general secretion pathway protein M
D YE3566 yst1E; general secretion pathway protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D YE3348 outE; general secretion pathway protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D YE3574 yst1O; type 4 prepilin-like proteins leader peptide processing enzyme K02464 gspO; general secretion pathway protein O [EC:3.4.23.43 2.1.1.-]
D YE3164 secD; protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D YE3163 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D YE0279 secE; preprotein translocase SecE subunit K03073 secE; preprotein translocase subunit SecE
D YE0431 secG; protein-export membrane protein K03075 secG; preprotein translocase subunit SecG
D YE3903 secY; preprotein translocase SecY subunit K03076 secY; preprotein translocase subunit SecY
D YE3165 putative membrane protein K03210 yajC; preprotein translocase subunit YajC
D YE4177 yidC; probable membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D YE0681 secA; preprotein translocase SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D YE0680 putative exported protein K13301 secM; secretion monitor
D YE0225 ftsY; cell division protein K03110 ftsY; fused signal recognition particle receptor
D YE0080 secB; protein-export protein K03071 secB; preprotein translocase subunit SecB
D YE0842 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D YE0259 tatA; Sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D YE0260 tatB; Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D YE0261 tatC; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D YE3009 tatE; sec-independent protein translocase protein K03425 tatE; sec-independent protein translocase protein TatE
D YE2408 putative hemolysin activator protein K11017 shlB; hemolysin activation/secretion protein
D YE2407 putative hemolysin K11016 shlA; hemolysin
D YEP0066 putative YadA invasin K12341 yadA; adhesin YadA
D YE2684 conserved hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG
D YE2689 conserved hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp
D YE2688 putative exported protein K11906 vasD; type VI secretion system protein VasD
D YE2685 putative exported protein K11891 impL; type VI secretion system protein ImpL
D YE2686 putative OmpA family protein K11892 impK; type VI secretion system protein ImpK
D YE2696 clpB5; Clp ATPase K11907 vasG; type VI secretion system protein VasG
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:yen02020]
D YE3181 phoR; phosphate regulon sensor protein PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D YE3182 phoB; phosphate regulon transcriptional regulatory protein K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D YE2068 phoA; alkaline phosphatase precursor K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D YE4201 pstS; putative phosphate-binding periplasmic protein K02040 pstS; phosphate transport system substrate-binding protein
D YE1717 phoQ; sensor protein kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D YE1718 phoP; response regulator protein K07660 phoP; two-component system, OmpR family, response regulator PhoP
D YEP0065 yomA; putative exported protein K07790 pagO; putative membrane protein PagO
D YE4005 envZ; osmolarity sensor protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D YE4004 ompR; transcriptional regulatory protein K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D YE1401 meoA; outer membrane protein C, porin K09475 ompC; outer membrane pore protein C
D YE1563 ompF; putative outer membrane porin F protein K09476 ompF; outer membrane pore protein F
D YE0085 cpxA; two component sensor kinase K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D YE0086 cpxR; two component system response regulatory protein K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D YE3713 putative membrane protein K25864 mzrA; modulator protein MzrA
D YE2084 rstB; two-component regulatory system, sensor kinase protein K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D YE2083 rstA; two-component regulatory system, response regulator protein K07661 rstA; two-component system, OmpR family, response regulator RstA
D YE0741 gsrA; global stress requirement protein GsrA K04771 degP; serine protease Do [EC:3.4.21.107]
D YE3383 creC; putative histidine kinase sensor K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3]
D YE3384 creB; putative response regulator K07663 creB; two-component system, OmpR family, catabolic regulation response regulator CreB
D YE1105 baeS; two-component system, sensor kinase K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3]
D YE1104 baeR; two-component system response regulator K07664 baeR; two-component system, OmpR family, response regulator BaeR
D YE1109 yegM; putitive HlyD family secretion protein K07799 mdtA; membrane fusion protein, multidrug efflux system
D YE1108 yegN; AcrB/AcrD/AcrF family membrane protein K07788 mdtB; multidrug efflux pump
D YE1107 yegO; AcrB/AcrD/AcrF family membrane protein K07789 mdtC; multidrug efflux pump
D YE1106 yegB; putative membrane protein K18326 mdtD; MFS transporter, DHA2 family, multidrug resistance protein
D YE1151 multidrug efflux protein K18324 acrD; multidrug efflux pump
D YE0422 basS; two-component system sensor protein K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3]
D YE0423 basR; two-component system response regulator K07771 basR; two-component system, OmpR family, response regulator BasR
D YE2192 conserved hypothteical protein K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87]
D YE3025 putative two-component system sensor protein K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D YE3024 copR; transcriptional activator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D YE3627 putative exported protein K07810 cusF; Cu(I)/Ag(I) efflux system periplasmic protein CusF
D YE3629 putative efflux system protein K07798 cusB; membrane fusion protein, copper/silver efflux system
D YE3630 putative cation efflux system protein K07787 cusA; copper/silver efflux system protein
D YE2581 flhD; flagellar transcriptional activator K02403 flhD; flagellar transcriptional activator FlhD
D YE2580 flhC; flagellum biosynthesis transcription activator K02402 flhC; flagellar transcriptional activator FlhC
D YE2521 fliC2; flagellin K02406 fliC; flagellin
D YE2522 fliC; thermoregulated motility protein K02406 fliC; flagellin
D YE2523 fliC3; flagellin K02406 fliC; flagellin
D YE2519 fliA; RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
D YE2579 motA; chemotaxis MotA protein K02556 motA; chemotaxis protein MotA
D YE2963 kdpD; two-component regulatory protein sensor kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D YE2964 kdpE; two-component regulatory protein response regulator KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D YE2960 kdpA; putative potassium-transporting ATPase A chain K01546 kdpA; potassium-transporting ATPase potassium-binding subunit
D YE2961 kdpB; putative potassium-transporting ATPase B chain K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]
D YE2962 kdpC; putative potassium-transporting ATPase C chain K01548 kdpC; potassium-transporting ATPase KdpC subunit
D YE1445 torC; cytochrome C-type protein K03532 torC; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorC
D YE3733 arcB; aerobic respiration control sensor/response regulatory protein K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D YE0595 arcA; aerobic respiration control protein K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA
D YE4173 dnaA; chromosomal replication initiator protein K02313 dnaA; chromosomal replication initiator protein
D YE0704 putative siderophore K19611 fepA; ferric enterobactin receptor
D YE2654 citA; sensor kinase protein K07700 dpiB; two-component system, CitB family, cit operon sensor histidine kinase CitA [EC:2.7.13.3]
D YE2655 citB; response regulator protein K07702 dpiA; two-component system, CitB family, response regulator CitB
D YE2653 citC; [citrate [pro-3s]-lyase] ligase K01910 citC; [citrate (pro-3S)-lyase] ligase [EC:6.2.1.22]
D YE2652 citD; citrate lyase acyl carrier protein K01646 citD; citrate lyase subunit gamma (acyl carrier protein)
D YE2651 citE; putative citrate lyase beta chain K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D YE2650 citF; citrate lyase alpha chain K01643 citF; citrate lyase subunit alpha / citrate CoA-transferase [EC:2.8.3.10]
D YE2649 citX; putative apo-citrate lyase phosphoribosyl-dephospho-CoA transferase K05964 citX; holo-ACP synthase [EC:2.7.7.61]
D YE2648 citG; 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase K05966 citG; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52]
D YE2647 citT; citrate carrier K09477 citT; citrate:succinate antiporter
D YE2505 two-component system, sensor kinase K07701 dcuS; two-component system, CitB family, sensor histidine kinase DcuS [EC:2.7.13.3]
D YE2506 two-component system, sensor regulator K07703 dcuR; two-component system, CitB family, response regulator DcuR
D YE0848 putative anaerobic C4-dicarboxylate transporter K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D YE2794 sfcA; NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D YE2507 putative citrate/sodium-family symporter K11616 maeN; malate:Na+ symporter
D YE2473 narX; nitrate/nitrite sensor protein K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D YE1153 narP; nitrate/nitrite response regulator protein NarP K07685 narP; two-component system, NarL family, nitrate/nitrite response regulator NarP
D YE0364 frdA; fumarate reductase flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D YE0363 frdB; fumarate reductase iron-sulfur protein K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D YE0362 frdC; fumarate reductase hydrophobic protein K00246 frdC; succinate dehydrogenase subunit C
D YE0361 frdD; fumarate reductase hydrophobic protein K00247 frdD; succinate dehydrogenase subunit D
D YE2055 putative inner-membrane regulatory protein K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D YE4087 uhpC; putative regulatory protein K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D YE2658 putative transporter protein K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D YE4088 uhpB; two-component system, sensor kinase K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D YE4089 uhpA; two-component system response regulator K07686 uhpA; two-component system, NarL family, uhpT operon response regulator UhpA
D YE2657 sensor kinase protein K20263 fusK; two-component system, NarL family, sensor histidine kinase FusK [EC:2.7.13.3]
D YE2656 GerR-family transcriptional regulatory protein K20264 fusR; two-component system, NarL family, response regulator FusR
D YE3256 rcsF; putative lipoprotein K06080 rcsF; RcsF protein
D YE1396 rcsC; two component sensor kinase/response regulator protein RcsC K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3]
D YE1398 putative two component sensor kinase K07676 rcsD; two-component system, NarL family, sensor histidine kinase RcsD [EC:2.7.13.3]
D YE1397 rcsB; probable two component response regulator component B K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D YE0742 barA; two-component regulatory protein K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D YE1831 uvrY; response regulator protein K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D YE0835 csrA; carbon storage regulator K03563 csrA; carbon storage regulator
D YE2663 putative virulence sensor protein K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D YE2662 putative two-component response regulator K07688 fimZ; two-component system, NarL family, response regulator, fimbrial Z protein, FimZ
D YE3560 ysrR; response regulator protein K07688 fimZ; two-component system, NarL family, response regulator, fimbrial Z protein, FimZ
D YE3578 response regulator protein K07688 fimZ; two-component system, NarL family, response regulator, fimbrial Z protein, FimZ
D YE2440 ampC; beta-lactamase K01467 ampC; beta-lactamase class C [EC:3.5.2.6]
D YE1860 putative exported protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D YE1856 putative membrane protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D YE1859 putative exported protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D YE1861 putative exported protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D YE0160 putative fimbrial chaperone K07346 fimC; fimbrial chaperone protein
D YE1858 putative chaperone protein K07346 fimC; fimbrial chaperone protein
D YE0159 putative outer membrane usher protein K07347 fimD; outer membrane usher protein
D YE1857 probable outer membrane usher protein K07347 fimD; outer membrane usher protein
D YE1112 outer membrane usher protein K07347 fimD; outer membrane usher protein
D YE1454 myfC; outer membrane usher protein K07347 fimD; outer membrane usher protein
D YE2693 outer membrane usher protein K07347 fimD; outer membrane usher protein
D YE2666 probable fimbrial usher protein K07347 fimD; outer membrane usher protein
D YE3635 rcpC; putative tight adherance operon protein K02279 cpaB; pilus assembly protein CpaB
D YE3636 rcpA; putative tight adherance operon protein K02280 cpaC; pilus assembly protein CpaC
D YE3637 tadZ; conserved hypothetical protein K02282 cpaE; pilus assembly protein CpaE
D YE3638 tadA; putative tight adherance operon protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D YE3639 tadB; putative tight adherance operon protein K12510 tadB; tight adherence protein B
D YE3640 tadC; putative tight adherance operon protein K12511 tadC; tight adherence protein C
D YE3286 glnD; [protein-PII] uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D YE1039 glnB; nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1
D YE0026 ntrB; Two component regulatory protein involved in nitrogen assimilation K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D YE0025 ntrC; nitrogen regulation protein K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D YE0027 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D YE4067 dctA; C4-dicarboxylate transport protein K11103 dctA; aerobic C4-dicarboxylate transport protein
D YE3759 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D YE1035 two-component system sensor kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D YE1037 two-component system response regulator K07715 glrR; two-component system, NtrC family, response regulator GlrR
D YE3609 hyb0; hydrogenase-2 small chain precursor K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
D YE3606 hybC; hydrogenase-2 large chain precursor K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D YE2572 cheR; chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D YE2971 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D YE4183 Putative methyl-accepting chemotaxis receptor protein K03406 mcp; methyl-accepting chemotaxis protein
D YE1405 tsr2; putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D YE2848 putative chemotactic transducer K03406 mcp; methyl-accepting chemotaxis protein
D YE3615 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D YE3338 cheD; putative methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D YE2575 cheD; methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D YE0409 methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D YE4139 tar; methyl-accepting chemotaxis protein II K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor
D YE2588 putative methyl-accepting chemotaxis protein K05876 trg; methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor
D YE2573 methyl-accepting chemotaxis protein K05877 tap; methyl-accepting chemotaxis protein IV, peptide sensor receptor
D YE1731 aer; putative methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D YE2576 cheW; chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D YE2577 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D YE2570 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D YE2571 cheB; protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D YE2673 putative chemotaxis protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D YE1614 ttrS; tetrathionate reductase complex: sensory transduction histidine kinase K13040 ttrS; two-component system, LuxR family, sensor histidine kinase TtrS [EC:2.7.13.3]
D YE1613 ttrR; tetrathionate reductase complex: two-component system response regulator K13041 ttrR; two-component system, LuxR family, response regulator TtrR
D YE1617 ttrA; tetrathionate reductase subunit A K08357 ttrA; tetrathionate reductase subunit A
D YE1615 ttrB; tetrathionate reductase subunit B K08358 ttrB; tetrathionate reductase subunit B
D YE1616 ttrC; tetrathionate reductase subunit C K08359 ttrC; tetrathionate reductase subunit C
D YE0311 putative two-component response regulator K14979 ssrB; two-component system, LuxR family, secretion system response regulator SsrB
D YE2994 gltL; putative glutamate/aspartate transport ATP-binding protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D YE2993 gltK; putative glutamate/aspartate transport system permease K10002 gltK; glutamate/aspartate transport system permease protein
D YE2992 gltJ; putative glutamate/aspartate transport system permease K10003 gltJ; glutamate/aspartate transport system permease protein
D YE2991 glnH; putative amino acid-binding protein precursor K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D YE3955 crp; cAMP-regulatory protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D YE0052 enoyl-CoA hydratase/isomerase family protein K13816 rpfF; DSF synthase
D YE3440 putative glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D YE3691 putative glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D YE2500 putative glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D YE2939 cydA; cytochrome D ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D YE2471 putative cytochrome oxidase subunit K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D YE2938 cydB; cytochrome D ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D YE2472 putative cytochrome oxidase subunit K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D YE1998 putative RTX-family toxin transporter K12530 rtxB; ATP-binding cassette, subfamily B, bacterial RtxB
D YE1999 hemolysin transport protein K12532 rtxD; membrane fusion protein, RTX toxin transport system
D YE2000 putative toxin transport protein K12531 rtxE; ATP-binding cassette, subfamily B, bacterial RtxE
D YE3665 hasF; ABC-transporter outer membrane component K12340 tolC; outer membrane protein
D YE0171 rffE; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D YE0172 rffD; putative UDP-glucose/GDP-mannose dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D YE0549 putative pectinesterase K01051 E3.1.1.11; pectinesterase [EC:3.1.1.11]
D YE0317 putative two-component system sensor protein K07165 fecR; transmembrane sensor
D YE2562 flgM; negative regulator of flagellin synthesis K02398 flgM; negative regulator of flagellin synthesis FlgM
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D YE0455 speF; ornithine decarboxylase, inducible K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D YE3527 speF2; ornithine decarboxylase, inducible K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D YE3447 speC; ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:yen02024]
D YE0839 luxS; autoinducer production protein K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D YE0377 ymr; yersinia multiple regulator K03666 hfq; host factor-I protein
D YE2209 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D YE2210 trpG; anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D YE0850 aroF; phospho-2-dehydro-3-deoxyheptonate aldolase,tyr-sensitive K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D YE2925 aroG; phospho-2-dehydro-3-deoxyheptonate aldolase,phe-sensitive K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D YE2178 aroH; phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D YE1035 two-component system sensor kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D YE1037 two-component system response regulator K07715 glrR; two-component system, NtrC family, response regulator GlrR
D YE2581 flhD; flagellar transcriptional activator K02403 flhD; flagellar transcriptional activator FlhD
D YE2580 flhC; flagellum biosynthesis transcription activator K02402 flhC; flagellar transcriptional activator FlhC
D YE2964 kdpE; two-component regulatory protein response regulator KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D YE2657 sensor kinase protein K20263 fusK; two-component system, NarL family, sensor histidine kinase FusK [EC:2.7.13.3]
D YE2656 GerR-family transcriptional regulatory protein K20264 fusR; two-component system, NarL family, response regulator FusR
D YE3693 gadA; glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D YE3692 putative amino acid permease K20265 gadC; glutamate:GABA antiporter
D YE0525 putative periplasmic solute-binding protein K10555 lsrB; AI-2 transport system substrate-binding protein
D YE0527 putative ABC transporter permease protein K10556 lsrC; AI-2 transport system permease protein
D YE0526 putative ABC transporter permease protein K10557 lsrD; AI-2 transport system permease protein
D YE0528 putative ABC transporter ATP-binding protein K10558 lsrA; AI-2 transport system ATP-binding protein
D YE0530 putative carbohydrate kinase K11216 lsrK; autoinducer-2 kinase [EC:2.7.1.189]
D YE0529 putative transcriptional regulatory protein K11531 lsrR; lsr operon transcriptional repressor
D YE0524 putative aldolase K08321 lsrF; 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase [EC:2.3.1.245]
D YE0523 conserved hypothetical protein K11530 lsrG; (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase [EC:5.3.1.32]
D YE1178 putative conjugal transfer protein K20266 trbJ; type IV secretion system protein TrbJ
D YE1177 putative conjugal transfer protein K07344 trbL; type IV secretion system protein TrbL
D YE0230 livK; branched-chain amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D YE0231 livH; high-affinity branched-chain amino acid transport system, permease protein K01997 livH; branched-chain amino acid transport system permease protein
D YE0232 livM; high-affinity branched-chain amino acid transport system, permease protein K01998 livM; branched-chain amino acid transport system permease protein
D YE0233 livG; high-affinity branched-chain amino acid transport, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D YE0234 livF; high-affinity branched-chain amino acid transport, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D YE1600 yenI; N-acylhomoserine lactone synthase K22956 expI; acyl homoserine lactone synthase [EC:2.3.1.184]
D YE1026 LuxR-family transcriptional regulator K19734 expR; LuxR family transcriptional regulator, quorum-sensing system regulator ExpR
D YE1599 yenR; quorum-sensing transcriptional activator K19734 expR; LuxR family transcriptional regulator, quorum-sensing system regulator ExpR
D YE4069 pelY; periplasmic pectate lyase precursor K01728 pel; pectate lyase [EC:4.2.2.2]
D YE0052 enoyl-CoA hydratase/isomerase family protein K13816 rpfF; DSF synthase
D YE0053 putative signalling protein K14051 gmr; c-di-GMP phosphodiesterase Gmr [EC:3.1.4.52]
D YE0656 putative AMP-binding enzyme-family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D YE2375 fadD; long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D YE3955 crp; cAMP-regulatory protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D YE3853 putative regulatory protein K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D YE1965 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D YE3161 ribD; riboflavin biosynthesis protein RibD [includes: diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D YE0445 ibeB; probable outer membrane efflux lipoprotein K18139 oprM; outer membrane protein, multidrug efflux system
D YE2233 oppA; periplasmic oligopeptide-binding protein precursor K15580 oppA; oligopeptide transport system substrate-binding protein
D YE2110 mppA; putative periplasmic murein peptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D YE2234 oppA2; periplasmic oligopeptide-binding protein precursor K15580 oppA; oligopeptide transport system substrate-binding protein
D YE2232 oppB; oligopeptide transport system permease protein K15581 oppB; oligopeptide transport system permease protein
D YE2231 oppC; oligopeptide transport system permease protein K15582 oppC; oligopeptide transport system permease protein
D YE2230 oppD; oligopeptide transport ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D YE2229 oppF; oligopeptide transport ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D YE0491 ABC transporter, substrate binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D YE0946 putative solute-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D YE0490 putative transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D YE0947 putative membrane protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D YE0489 putative transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D YE0948 binding-protein-dependent transport protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D YE0488 putative ABC transporter transporter,ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D YE0949 putative transport ATPase K02031 ddpD; peptide/nickel transport system ATP-binding protein
D YE0487 putative ABC transporter, ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D YE0950 putative transport ATPase K02032 ddpF; peptide/nickel transport system ATP-binding protein
D YE4177 yidC; probable membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D YE0279 secE; preprotein translocase SecE subunit K03073 secE; preprotein translocase subunit SecE
D YE0431 secG; protein-export membrane protein K03075 secG; preprotein translocase subunit SecG
D YE3903 secY; preprotein translocase SecY subunit K03076 secY; preprotein translocase subunit SecY
D YE3165 putative membrane protein K03210 yajC; preprotein translocase subunit YajC
D YE0681 secA; preprotein translocase SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D YE0225 ftsY; cell division protein K03110 ftsY; fused signal recognition particle receptor
D YE0080 secB; protein-export protein K03071 secB; preprotein translocase subunit SecB
D YE0842 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:yen02030]
D YE2971 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D YE4183 Putative methyl-accepting chemotaxis receptor protein K03406 mcp; methyl-accepting chemotaxis protein
D YE1405 tsr2; putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D YE2848 putative chemotactic transducer K03406 mcp; methyl-accepting chemotaxis protein
D YE3615 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D YE3338 cheD; putative methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D YE2575 cheD; methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D YE0409 methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D YE4139 tar; methyl-accepting chemotaxis protein II K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor
D YE2588 putative methyl-accepting chemotaxis protein K05876 trg; methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor
D YE2573 methyl-accepting chemotaxis protein K05877 tap; methyl-accepting chemotaxis protein IV, peptide sensor receptor
D YE1731 aer; putative methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D YE3866 malE; maltose-binding periplasmic protein precursor K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D YE0011 rbsB; putative D-ribose-binding periplasmic protein precursor K10439 rbsB; ribose transport system substrate-binding protein
D YE2609 ABC transporter, substrate binding component K10439 rbsB; ribose transport system substrate-binding protein
D YE2815 mglB; galactose-binding protein K10540 mglB; methyl-galactoside transport system substrate-binding protein
D YE4083 dppA; periplasmic dipeptide transport protein K12368 dppA; dipeptide transport system substrate-binding protein
D YE2577 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D YE2576 cheW; chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D YE2570 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D YE2569 cheZ; chemotaxis protein CheZ K03414 cheZ; chemotaxis protein CheZ
D YE2571 cheB; protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D YE2673 putative chemotaxis protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D YE2572 cheR; chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D YE2538 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D YE2544 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D YE2545 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D YE2579 motA; chemotaxis MotA protein K02556 motA; chemotaxis protein MotA
D YE2578 motB; chemotaxis MotB protein K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:yen02040]
D YE2536 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D YE2537 fliF; flagellar M-ring protein K02409 fliF; flagellar M-ring protein FliF
D YE2538 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D YE2539 fliH; flagellar assembly protein K02411 fliH; flagellar assembly protein FliH
D YE2540 fliI; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D YE2541 fliJ; flagellar protein FliJ K02413 fliJ; flagellar protein FliJ
D YE2542 fliK; flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK
D YE2543 fliL; flagellar protein FliL K02415 fliL; flagellar protein FliL
D YE2544 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D YE2545 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D YE2546 fliO; flagellar protein FliO K02418 fliO; flagellar protein FliO/FliZ
D YE2547 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D YE2548 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D YE2549 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D YE2565 flhE; flagellar protein FlhE precursor K03516 flhE; flagellar protein FlhE
D YE2566 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D YE2567 flhB; flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D YE2561 flgA; flagella basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D YE2560 flgB; flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D YE2559 flgC; flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D YE2558 flgD; basal-body rod modification protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D YE2557 flgE; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D YE2556 flgF; flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D YE2555 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D YE2554 flgH; flagellar L-ring protein precursor K02393 flgH; flagellar L-ring protein FlgH
D YE2553 flgI; flagellar P-ring protein precursor K02394 flgI; flagellar P-ring protein FlgI
D YE2552 flgJ; flagellar protein FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D YE2551 flgK; flagellar hook-associated protein 1 K02396 flgK; flagellar hook-associated protein 1
D YE2550 flgL; flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL
D YE2521 fliC2; flagellin K02406 fliC; flagellin
D YE2522 fliC; thermoregulated motility protein K02406 fliC; flagellin
D YE2523 fliC3; flagellin K02406 fliC; flagellin
D YE2524 fliD; flagellar hook-associated protein 2 K02407 fliD; flagellar hook-associated protein 2
D YE2525 fliS; flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D YE2526 fliT; flagella protein K02423 fliT; flagellar protein FliT
D YE2579 motA; chemotaxis MotA protein K02556 motA; chemotaxis protein MotA
D YE2578 motB; chemotaxis MotB protein K02557 motB; chemotaxis protein MotB
D YE2562 flgM; negative regulator of flagellin synthesis K02398 flgM; negative regulator of flagellin synthesis FlgM
D YE2563 flgN; flagella synthesis protein FlgN K02399 flgN; flagellar biosynthesis protein FlgN
D YE2516 fliY; putative cystine-binding periplasmic protein K02424 tcyA; L-cystine transport system substrate-binding protein
D YE2518 fliZ; putative alternative sigma factor regulatory protein K02425 fliZ; regulator of sigma S factor FliZ
D YE3684 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D YE2581 flhD; flagellar transcriptional activator K02403 flhD; flagellar transcriptional activator FlhD
D YE2580 flhC; flagellum biosynthesis transcription activator K02402 flhC; flagellar transcriptional activator FlhC
D YE3759 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D YE2519 fliA; RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D YE0747 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:yen04980]
D YE1894A putative GTPase/ATPase K07588 MMAA; GTPase [EC:3.6.5.-]
D YE1895 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D YE3875 metH; 5-Methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection [PATH:yen05135]
D YE0694 putative adhesin K13735 yeeJ; adhesin/invasin
D YEP0066 putative YadA invasin K12341 yadA; adhesin YadA
D YEP0081 yopO; putative targeted effector protein kinase K23472 ypkA; serine/threonine protein kinase YpkA [EC:2.7.11.1]
D YEP0005 yopT; plasmid type III secretion system effector protein K08599 yopT; YopT peptidase [EC:3.4.22.-]
D YEP0053 putative outer membrane virulence protein K23473 yopE; outer membrane virulence protein YopE
D YEP0050 putative protein-tyrosine phosphatase Yop effector K23474 yopH; tyrosine-protein phosphatase YopH [EC:3.1.3.48]
D YEP0013 yopB; virulence plasmid YopB transmembrane effector protein K23475 yopB; transloator
D YEP0012 yopD; translocator protein K23476 yopD; transloator
D YEP0004 yopQ; virulence plasmid protein K23477 yopQ; protein YopQ
D YEP0010 yopM; yop type III secretion system effector protein K23478 yopM; outer membrane protein YopM
D YEP0083 yopJ; putative targeted effector protein K08598 yopJ; YopJ protease family
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells [PATH:yen05100]
D YE0694 putative adhesin K13735 yeeJ; adhesin/invasin
D YE3535 yspD; hypothetical protein K13287 sipD; invasin D
D YE3537 yspB; putative type III secretion system effector protein K13285 sipB; invasin B
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:yen01501]
D YE1563 ompF; putative outer membrane porin F protein K09476 ompF; outer membrane pore protein F
D YE1401 meoA; outer membrane protein C, porin K09475 ompC; outer membrane pore protein C
D YE3139 ampG; Beta-lactamase induction signal transducer AmpG K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D YE1705 ycfO; beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D YE3687 glycosyl hydrolase family protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D YE2441 ampR; transcriptional activator protein K17850 ampR; LysR family transcriptional regulator, regulator of gene expression of beta-lactamase
D YE2440 ampC; beta-lactamase K01467 ampC; beta-lactamase class C [EC:3.5.2.6]
D YE2233 oppA; periplasmic oligopeptide-binding protein precursor K15580 oppA; oligopeptide transport system substrate-binding protein
D YE2110 mppA; putative periplasmic murein peptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D YE2234 oppA2; periplasmic oligopeptide-binding protein precursor K15580 oppA; oligopeptide transport system substrate-binding protein
D YE2232 oppB; oligopeptide transport system permease protein K15581 oppB; oligopeptide transport system permease protein
D YE2231 oppC; oligopeptide transport system permease protein K15582 oppC; oligopeptide transport system permease protein
D YE2230 oppD; oligopeptide transport ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D YE2229 oppF; oligopeptide transport ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D YE2019 blaA; beta-lactamase precursor K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D YE0443 multidrug efflux protein K03585 acrA; membrane fusion protein, multidrug efflux system
D YE3100 acrA; multidrug efflux protein K03585 acrA; membrane fusion protein, multidrug efflux system
D YE3101 acrB; multidrug efflux protein K18138 acrB; multidrug efflux pump
D YE0444 multidrug efflux protein K18138 acrB; multidrug efflux pump
D YE3595 putative integral membrane efflux protein K18138 acrB; multidrug efflux pump
D YE0445 ibeB; probable outer membrane efflux lipoprotein K18139 oprM; outer membrane protein, multidrug efflux system
D YE3665 hasF; ABC-transporter outer membrane component K12340 tolC; outer membrane protein
D YE3979 mrcA; penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D YE3002 pbpA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D YE1767 ftsI2; peptidoglycan synthetase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D YE0666 ftsI; penicillin-binding protein 3 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:yen01502]
D YE3211 ddlA; D-alanine--D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D YE0674 ddlB; D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D YE3848 alr; alanine racemase (biosynthetic) K01775 alr; alanine racemase [EC:5.1.1.1]
D YE2280 dadB; alanine racemase, catabolic K01775 alr; alanine racemase [EC:5.1.1.1]
D YE0668 murF; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diami nopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D YE0669 mraY; phospho-N-acetylmuramoyl-pentapeptide-transfera se K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D YE0672 murG; UDP-N-acetylglucosamine:N-acetylmuramyl-(pentap eptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:yen01503]
D YE1717 phoQ; sensor protein kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D YE1718 phoP; response regulator protein K07660 phoP; two-component system, OmpR family, response regulator PhoP
D YE4090 yhjW; putative membrane protein K12975 eptB; KDO II ethanolaminephosphotransferase [EC:2.7.8.42]
D YE1762 putative exported protein K12973 pagP; lipid IVA palmitoyltransferase [EC:2.3.1.251]
D YE2192 conserved hypothteical protein K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87]
D YE2191 pmrF; probable glycosyl transferase K10012 arnC; undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [EC:2.4.2.53]
D YE2190 probable formyl transferase K10011 arnA; UDP-4-amino-4-deoxy-L-arabinose formyltransferase / UDP-glucuronic acid dehydrogenase (UDP-4-keto-hexauronic acid decarboxylating) [EC:2.1.2.13 1.1.1.305]
D YE2189 conserved hypothetical protein K13014 arnD; undecaprenyl phosphate-alpha-L-ara4FN deformylase [EC:3.5.1.-]
D YE2188 dolichyl-phosphate-mannose-protein mannosyltransferase-family protein K07264 arnT; 4-amino-4-deoxy-L-arabinose transferase [EC:2.4.2.43]
D YE2187 putative membrane protein K12962 arnE; undecaprenyl phosphate-alpha-L-ara4N flippase subunit ArnE
D YE2186 putative membrane protein K12963 arnF; undecaprenyl phosphate-alpha-L-ara4N flippase subunit ArnF
D YE0422 basS; two-component system sensor protein K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3]
D YE0423 basR; two-component system response regulator K07771 basR; two-component system, OmpR family, response regulator BasR
D YE2150 putative membrane protein K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D YE2125 sapA; peptide transport periplasmic protein precursor K19226 sapA; cationic peptide transport system substrate-binding protein
D YE2126 sapB; peptide transport system permease protein K19227 sapB; cationic peptide transport system permease protein
D YE2127 sapC; peptide transport system permease protein K19228 sapC; cationic peptide transport system permease protein
D YE2128 sapD; peptide transport system ATP-binding protein K19229 sapD; cationic peptide transport system ATP-binding protein
D YE2129 sapF; peptide transport system ATP-binding protein K19230 sapF; cationic peptide transport system ATP-binding protein
D YE4052 metalloprotease K01406 prtC; serralysin [EC:3.4.24.40]
D YE3259 cutF; putative copper homeostasis lipoprotein K06079 cutF; copper homeostasis protein (lipoprotein)
D YE0085 cpxA; two component sensor kinase K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D YE0086 cpxR; two component system response regulatory protein K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D YE0374 putative N-acetylmuramoyl-L-alanine amidase-family protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D YE3307 N-acetylmuramoyl-L-alanine amidase AmiC precursor K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D YE2166 putative exported protein K19236 ycfS; L,D-transpeptidase YcfS
D YE0741 gsrA; global stress requirement protein GsrA K04771 degP; serine protease Do [EC:3.4.21.107]
D YE0020 dsbA; secreted thiol:disulfide interchange protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D YE0789 putative thiol:disulfide interchange protein K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D YE3960 ppiA; peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D YE0443 multidrug efflux protein K03585 acrA; membrane fusion protein, multidrug efflux system
D YE3100 acrA; multidrug efflux protein K03585 acrA; membrane fusion protein, multidrug efflux system
D YE3101 acrB; multidrug efflux protein K18138 acrB; multidrug efflux pump
D YE0444 multidrug efflux protein K18138 acrB; multidrug efflux pump
D YE3595 putative integral membrane efflux protein K18138 acrB; multidrug efflux pump
D YE3665 hasF; ABC-transporter outer membrane component K12340 tolC; outer membrane protein
D YE3272 lpxA; acyl-[acyl-carrier-protein]--UDP-N-acetylglucos amine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D YE2286 lpxA2; acyl-[acyl-carrier-protein]--udp-N-acetylglucos amine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:yen01000]
C 01001 Protein kinases [BR:yen01001]
D YE1747 conserved hypothetical protein K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
D YEP0081 yopO; putative targeted effector protein kinase K23472 ypkA; serine/threonine protein kinase YpkA [EC:2.7.11.1]
D YE3843 putative transcriptional regulator K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D YE1175 conserved hypothetical protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D YE4128 conserved hypothetical protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D YE3181 phoR; phosphate regulon sensor protein PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D YE1717 phoQ; sensor protein kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D YE4005 envZ; osmolarity sensor protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D YE2084 rstB; two-component regulatory system, sensor kinase protein K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D YE0085 cpxA; two component sensor kinase K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D YE3383 creC; putative histidine kinase sensor K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3]
D YE1105 baeS; two-component system, sensor kinase K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3]
D YE0422 basS; two-component system sensor protein K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3]
D YE3025 putative two-component system sensor protein K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D YE2963 kdpD; two-component regulatory protein sensor kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D YE3733 arcB; aerobic respiration control sensor/response regulatory protein K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D YE1202 putative two-component system sensor kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D YE2473 narX; nitrate/nitrite sensor protein K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D YE4088 uhpB; two-component system, sensor kinase K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D YE2657 sensor kinase protein K20263 fusK; two-component system, NarL family, sensor histidine kinase FusK [EC:2.7.13.3]
D YE1398 putative two component sensor kinase K07676 rcsD; two-component system, NarL family, sensor histidine kinase RcsD [EC:2.7.13.3]
D YE1396 rcsC; two component sensor kinase/response regulator protein RcsC K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3]
D YE0742 barA; two-component regulatory protein K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D YE2663 putative virulence sensor protein K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D YE2654 citA; sensor kinase protein K07700 dpiB; two-component system, CitB family, cit operon sensor histidine kinase CitA [EC:2.7.13.3]
D YE2505 two-component system, sensor kinase K07701 dcuS; two-component system, CitB family, sensor histidine kinase DcuS [EC:2.7.13.3]
D YE1228 two-component system histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D YE4014 putative membrane protein K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D YE0026 ntrB; Two component regulatory protein involved in nitrogen assimilation K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D YE1035 two-component system sensor kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D YE2577 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D YE1614 ttrS; tetrathionate reductase complex: sensory transduction histidine kinase K13040 ttrS; two-component system, LuxR family, sensor histidine kinase TtrS [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:yen01009]
D YE0089 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D YE3090 htpG; heat shock protein HtpG K04079 HSP90A; molecular chaperone HtpG
D YE0578 serB; phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:yen01002]
D YE0617 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D YE3574 yst1O; type 4 prepilin-like proteins leader peptide processing enzyme K02464 gspO; general secretion pathway protein O [EC:3.4.23.43 2.1.1.-]
D YE3634 tadV; putative tight adherance operon protein K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D YE3605 hybD; hydrogenase 2 maturation protease K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-]
D YE2808 hyfK; putative hydrogenase maturation protease K08315 hycI; hydrogenase 3 maturation protease [EC:3.4.23.51]
D YE2950 pcp; putative pyrrolidone-carboxylate peptidase K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3]
D YE1082 guaA; putative GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D YE1696 putative ABC transport protein, ATP-binding component K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D YE1433 spr; putative lipoprotein K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13]
D YE2156 putative exported protein K19303 mepH; murein DD-endopeptidase [EC:3.4.-.-]
D YE2185 nlpC; putative lipoprotein K13695 nlpC; probable lipoprotein NlpC
D YE1315 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D YE3735 gltB; glutamate synthase [NADPH] large chain precursor K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D YE4203 glmS; glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D YE2983 asnB; asparagine synthetase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D YEP0083 yopJ; putative targeted effector protein K08598 yopJ; YopJ protease family
D YE3150 thiJ; 4-methyl-5(B-hydroxyethyl)-thiazol monophosphate biosynthesis enzyme K03152 thiJ; protein deglycase [EC:3.5.1.124]
D YEP0005 yopT; plasmid type III secretion system effector protein K08599 yopT; YopT peptidase [EC:3.4.22.-]
D YE2166 putative exported protein K19236 ycfS; L,D-transpeptidase YcfS
D YE1557 putative exported protein K21470 ycbB; L,D-transpeptidase YcbB
D YE2916 putative membrane protein K07052 K07052; CAAX protease family protein
D YE1567 pepN; putative aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D YE4054 opdA; oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D YE4052 metalloprotease K01406 prtC; serralysin [EC:3.4.24.40]
D YE3311 ptrA; protease III precursor K01407 ptrA; protease III [EC:3.4.24.55]
D YE0320 probable exported Zinc protease K07263 pqqL; zinc protease [EC:3.4.24.-]
D YE4066 putative insulinase family protease K07263 pqqL; zinc protease [EC:3.4.24.-]
D YE0500 pepA; cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D YE1064 pepB; peptidase B K07751 pepB; PepB aminopeptidase [EC:3.4.11.23]
D YE1147 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D YE1715 pepT; peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D YE3206 pepD; aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D YE2387 putative M23/M37 peptidase-family protein K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
D YE3285 ampM; methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D YE3582 map; methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D YE0269 pepQ; proline dipeptidase K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9]
D YE3396 pepP; proline-specific aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D YE0760 peptidase K09612 iap; alkaline phosphatase isozyme conversion protein [EC:3.4.11.-]
D YE2085 putative carboxypeptidase K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19]
D YE0428 ftsH; cell division protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D YE1869 htpX; putative heat shock protein K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D YE3417 putative lipoprotein K07387 K07387; metalloprotease [EC:3.4.24.-]
D YE1132 putative exported protein K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-]
D YE3277 putative membrane protein K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D YE1282 mepA; putative penicillin-insensitive murein endopeptidase K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-]
D YE2610 conserved hypothetical protein K09933 mtfA; MtfA peptidase
D YE2087 possible protease K04775 ydgD; protease YdgD [EC:3.4.21.-]
D YE0741 gsrA; global stress requirement protein GsrA K04771 degP; serine protease Do [EC:3.4.21.107]
D YE3744 degQ; protease K04772 degQ; serine protease DegQ [EC:3.4.21.-]
D YE3745 degS; protease K04691 hhoB; serine protease DegS [EC:3.4.21.-]
D YE1789 ptrB; oligopeptidase B K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D YE3005 dacA; putative penicillin-binding protein 5 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D YE1471 dacC; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D YE2884 pbpG; penicillin-binding protein 7 precursor K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D YE1402 ampH; putative penicillin-binding protein K18988 ampH; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase [EC:3.4.16.4 3.4.21.-]
D YE0424 dacB; penicillin-binding protein 4 precursor K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D YE3134 clpP; ATP-dependent Clp protease proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D YE3132 lon; ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D YE1579 putative Lon protease K04770 lonH; Lon-like ATP-dependent protease [EC:3.4.21.-]
D YE3855 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D YE1733 umuD; putative uv protection and mutation protein K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D YE1016 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D YE1793 pip; proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D YE1868 prc; tail-specific protease precursor K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D YE2260 sppA; protease IV K04773 sppA; protease IV [EC:3.4.21.-]
D YE2203 sohB; peptidase family U7 protein K04774 sohB; serine protease SohB [EC:3.4.21.-]
D YE3988 glpG; probable membrane protein K02441 glpG; rhomboid protease GlpG [EC:3.4.21.105]
D YE0105 hslV; heat shock protein K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D YE3175 ggt; gamma-glutamyltranspeptidase precursor K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D YE1100 putative protease K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D YE0449 conserved hypothetical protein K24845 ubiV; O2-independent ubiquinone biosynthesis protein UbiV
D YE0450 putative protease K24844 ubiU; O2-independent ubiquinone biosynthesis protein UbiU
D YE3789 pmbA; Putative modulator of DNA gyrase K03592 pmbA; PmbA protein
D YE3798 tldD; putative modulator of DNA gyrase K03568 tldD; TldD protein
D YE1390 eco; putative ecotin precursor K08276 eco; ecotin
D YE1066 putative membrane protein K06894 yfhM; alpha-2-macroglobulin
D YE0380 hflC; putative membrane protein K04087 hflC; modulator of FtsH protease HflC
D YE0379 hflK; putative membrane protein K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:yen01003]
D YE4010 glgA; glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D YE4074 bcsA; cellulose synthase 1 catalytic subunit [UDP-forming] K00694 bcsA; cellulose synthase (UDP-forming) [EC:2.4.1.12]
D YE3731 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D YE1067 pbpC; penicillin-binding protein K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D YE0729 mrcB; penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D YE3979 mrcA; penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D YE0180 wecG; probable UDP-N-acetyl-D-mannosaminuronic acid transferase K02852 wecG; UDP-N-acetyl-D-mannosaminouronate:lipid I N-acetyl-D-mannosaminouronosyltransferase [EC:2.4.1.180]
D YE0178 conserved hypothetical protein K12582 wecF; dTDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase [EC:2.4.1.325]
D YE0169 rfe; putative undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D YE1606 mdoH; osmoregulated periplasmic glucan biosynthetic protein K03669 mdoH; membrane glycosyltransferase [EC:2.4.1.-]
D YE3196 putative cyclic beta 1-2 glucan synthetase K13688 chvB; cyclic beta-1,2-glucan glucanotransferase [EC:2.4.1.397]
D YE2482 hmsR; haemin storage system, HmsR protein K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:yen01005]
D YE3272 lpxA; acyl-[acyl-carrier-protein]--UDP-N-acetylglucos amine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D YE2286 lpxA2; acyl-[acyl-carrier-protein]--udp-N-acetylglucos amine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D YE3271 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D YE0678 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D YE3274 lpxD; UDP-3-o-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D YE3050 conserved hypothetical protein K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D YE1544 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D YE1612 htrB; putative lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D YE2386 msbB; lipid A biosynthesis acyltransferase K02560 lpxM; lauroyl-Kdo2-lipid IVA myristoyltransferase [EC:2.3.1.243]
D YE3829 ddg; putative membrane protein K12974 lpxP; KDO2-lipid IV(A) palmitoleoyltransferase [EC:2.3.1.242]
D YE1434 putative membrane protein K19803 lpxT; Kdo2-lipid A phosphotransferase [EC:2.7.4.29]
D YE3039 putative exported protein K09953 lpxR; lipid A 3-O-deacylase [EC:3.1.1.-]
D YE0069 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D YE2188 dolichyl-phosphate-mannose-protein mannosyltransferase-family protein K07264 arnT; 4-amino-4-deoxy-L-arabinose transferase [EC:2.4.2.43]
D YE1762 putative exported protein K12973 pagP; lipid IVA palmitoyltransferase [EC:2.3.1.251]
D YE2150 putative membrane protein K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D YE4090 yhjW; putative membrane protein K12975 eptB; KDO II ethanolaminephosphotransferase [EC:2.7.8.42]
D YE2427 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D YE1550 kdsB; putative 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D YE3755 conserved hypothetical protein K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D YE3754 conserved hypothetical protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D YE0070 rfaC; lipopolysaccharide heptosyltransferase-1 K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D YE0068 kdtX; lipopolysaccharide core biosynthesis glycosyl transferase K12984 waaE; (heptosyl)LPS beta-1,4-glucosyltransferase [EC:2.4.1.-]
D YE0071 rfaF; ADP-heptose--LPS heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D YE0531 putative lipopolysaccharide core biosynthesis protein K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25]
D YE3223 lpcA; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D YE3252 conserved hypothetical protein K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D YE3673 rfaE; ADP-heptose synthase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D YE0072 rfaD; ADP-L-glycero-D-manno-heptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D YE3083 wbcC; putative glycosyltransferase K13005 rfbV; O-antigen biosynthesis alpha-1,3-abequosyltransferase [EC:2.4.1.60]
D YE0179 wecF; probable 4-alpha-L-fucosyltransferase K02853 wzyE; enterobacterial common antigen polymerase [EC:2.4.99.27]
D YE0169 rfe; putative undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:yen01011]
D YE3746 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D YE0274 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D YE0673 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D YE0670 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D YE0667 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-dia minopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D YE3211 ddlA; D-alanine--D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D YE0674 ddlB; D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D YE3848 alr; alanine racemase (biosynthetic) K01775 alr; alanine racemase [EC:5.1.1.1]
D YE2280 dadB; alanine racemase, catabolic K01775 alr; alanine racemase [EC:5.1.1.1]
D YE0140 murI; putative glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D YE0669 mraY; phospho-N-acetylmuramoyl-pentapeptide-transfera se K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D YE0672 murG; UDP-N-acetylglucosamine:N-acetylmuramyl-(pentap eptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D YE3678 bacA; putative bacitracin resistance protein K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D YE1476 putative permease K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D YE2409 mviN; putative membrane protein K03980 murJ; putative peptidoglycan lipid II flippase
D YE3979 mrcA; penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D YE0729 mrcB; penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D YE1067 pbpC; penicillin-binding protein K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D YE3002 pbpA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D YE1767 ftsI2; peptidoglycan synthetase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D YE0666 ftsI; penicillin-binding protein 3 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D YE3005 dacA; putative penicillin-binding protein 5 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D YE1471 dacC; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D YE0424 dacB; penicillin-binding protein 4 precursor K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D YE1402 ampH; putative penicillin-binding protein K18988 ampH; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase [EC:3.4.16.4 3.4.21.-]
D YE2884 pbpG; penicillin-binding protein 7 precursor K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D YE3731 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D YE2166 putative exported protein K19236 ycfS; L,D-transpeptidase YcfS
D YE1557 putative exported protein K21470 ycbB; L,D-transpeptidase YcbB
D YE1282 mepA; putative penicillin-insensitive murein endopeptidase K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-]
D YE2156 putative exported protein K19303 mepH; murein DD-endopeptidase [EC:3.4.-.-]
D YE1433 spr; putative lipoprotein K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13]
D YE2387 putative M23/M37 peptidase-family protein K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
D YE0589 slt; putative soluble lytic murein transglycosylase K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D YE3306 membrane-bound lytic murein transglycosylase A precursor K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29]
D YE1242 mltB; putative membrane-bound lytic murein transglycosylase B K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D YE2367 putative lipoprotein K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D YE3445 mltC; membrane-bound lytic murein transglycosylase C K08306 mltC; peptidoglycan lytic transglycosylase C [EC:4.2.2.29]
D YE0918 mltD; membrane-bound lytic murein transglycosylase D precursor K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D YE1901 putative membrane-bound lytic murein transglycosylase K08308 mltE; peptidoglycan lytic transglycosylase E [EC:4.2.2.29]
D YE1031 putative membrane protein K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29]
D YE1639 yceG; putative exported protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D YE3004 rlpA; rare lipoprotein A precursor K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D YE0374 putative N-acetylmuramoyl-L-alanine amidase-family protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D YE3307 N-acetylmuramoyl-L-alanine amidase AmiC precursor K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D YE1878 b0867; probable N-acetylmuramoyl-L-alanine amidase K11066 amiD; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D YE0692 ampD; putative signalling protein in beta-lactamase regulation K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28]
D YE2165 lpp; major outer membrane lipoprotein K06078 lpp; murein lipoprotein
C 01004 Lipid biosynthesis proteins [BR:yen01004]
D YE1634 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D YE1633 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D YE0908 putative beta-ketoacyl-[ACP] synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D YE1287 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D YE1576 putative 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D YE0911 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D YE1637 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D YE0795 putative acyl-carrier-protein K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D YE1635 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YE0910 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YE2069 putative short chain dehydrogenease K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YE0798 putative acyl-carrier-protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YE1578 fabA; 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D YE3273 fabZ; (3R)-hydroxymyristoyl-(acyl carrier protein) dehydratase (EC 4.2.1.-) K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D YE4179 conserved hypothetical protein K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D YE3055 tesA; putative acyl-CoA thioesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D YE3118 tesB; acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D YE2221 putative acyl-CoA thioester hydrolase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
D YE3128 conserved hypothetical protein K12500 tesC; thioesterase III [EC:3.1.2.-]
D YE2618 irp1; yersiniabactin biosynthetic protein K04786 irp1; yersiniabactin nonribosomal peptide/polyketide synthase
D YE2617 irp2; yersiniabactin biosynthetic protein K04784 irp2; yersiniabactin nonribosomal peptide synthetase
D YE0309 acs; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D YE0656 putative AMP-binding enzyme-family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D YE2375 fadD; long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D YE3857 plsB; glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D YE1632 plsX; fatty acid/phospholipid synthesis protein K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D YE3680 putative membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D YE3655 plsC; putative acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:yen01008]
D YE2642 putative phosphopantetheinyl transferase K02362 entD; enterobactin synthetase component D [EC:6.3.2.14 2.7.8.-]
D YE2618 irp1; yersiniabactin biosynthetic protein K04786 irp1; yersiniabactin nonribosomal peptide/polyketide synthase
D YE2617 irp2; yersiniabactin biosynthetic protein K04784 irp2; yersiniabactin nonribosomal peptide synthetase
D YE2621 ybtE; yersiniabactin siderophore biosynthetic protein K04783 irp5; yersiniabactin salicyl-AMP ligase [EC:6.3.2.-]
D YE2619 ybtU; yersiniabactin biosynthetic protein YbtU K04785 irp3; yersiniabactin synthetase, thiazolinyl reductase component
D YE2620 ybtT; yersiniabactin biosynthetic protein YbtT K05374 irp4; yersiniabactin synthetase, thioesterase component
C 01006 Prenyltransferases [BR:yen01006]
D YE3154 ispA; geranyltranstransferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D YE0417 ispB; octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D YE3279 uppS; undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D YE0376 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D YE0103 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D YE3858 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D YE3145 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:yen01007]
D YE1215 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D YE2977 glnS; glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D YE0724 yadB; putative glutamyl-tRNA synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D YE2139 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D YE3969 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D YE3048 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D YE2406 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D YE2785 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D YE0616 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D YE0498 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D YE2996 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D YE3374 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D YE2397 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D YE1564 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D YE1074 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D YE4151 glyQ; glycyl-tRNA synthetase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D YE4150 glyS; glycyl-tRNA synthetase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D YE1528 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D YE3258 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D YE1912 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D YE0834 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D YE1916 pheS; phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D YE1917 pheT; phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D YE1561 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D YE4161 avtA; valine--pyruvate aminotransferase K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66]
D YE1341 aat; probable aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D YE1231 putative aminotransferase K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-]
D YE3847 tyrB; aromatic-amino-acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D YE3234 putative aminotransferase K14287 ybdL; methionine transaminase [EC:2.6.1.88]
D YE2767 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D YE0073 kbl; 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D YE2906 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D YE2010 putative aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D YE3957 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D YE2469 astC; succinylornithine aminotransferase K00840 astC; succinylornithine aminotransferase [EC:2.6.1.81]
D YE2908 bioA; adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D YE0734 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D YE0150 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D YE1537 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D YE2192 conserved hypothteical protein K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87]
D YE0176 rffA; putative lipopolysaccharide biosynthesis protein K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:yen00194]
D YE4205 atpC; ATP synthase epsilon subunit protein K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D YE4206 atpD; ATP synthase beta subunit protein K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D YE4207 atpG; ATP synthase gamma subunit protein K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D YE4208 atpA; ATP synthase alpha subunit protein K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D YE4209 atpH; ATP synthase delta subunit protein K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D YE4210 atpF; ATP synthase subunit B protein K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D YE4211 atpE; ATP synthase subunit C protein K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D YE4212 atpB; ATP synthase subunit B protein K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D YE4213 atpI; ATP synthase protein I K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:yen03000]
D YE1681 prophage encoded DNA modification methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D YE2362 dcm; putative cytosine-specific modification methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D YE2006 araC; arabinose operon regulatory protein K02099 araC; AraC family transcriptional regulator, arabinose operon regulatory protein
D YE0971 celD; cel operon repressor K03490 chbR; AraC family transcriptional regulator, dual regulator of chb operon
D YE2616 ybtA; transcriptional regulator YbtA K05372 ybtA; AraC family transcriptional regulator
D YE0593 rob; putative right origin-binding protein K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator
D YEP0035 virF; virulence regulon transcriptional activator K20968 exsA; AraC family transcriptional regulator, exoenzyme S synthesis regulatory protein ExsA
D YE2726 pocR; pdu and cob operons regulatory protein K27259 pocR; AraC family transcriptional regulator, pdu and cob operon regulator
D YE1743 putative AraC-family transcriptional regulatory protein K07506 K07506; AraC family transcriptional regulator
D YE0084 bifunctional regulatory protein/DNA repair protein K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D YE0941 AraC-family transcriptional regulator K13633 ftrA; AraC family transcriptional regulator, transcriptional activator FtrA
D YE3300 gcvA; glycine cleavage system transcriptional activator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D YE0154 ilvY; LysR-family transcriptional regulatory protein K02521 ilvY; LysR family transcriptional regulator, positive regulator for ilvC
D YE0248 metR; lysR-family transcriptional regulatory protein K03576 metR; LysR family transcriptional regulator, regulator for metE and metH
D YE0612 nhaR; transcriptional activator protein NhaR K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA
D YE0133 oxyR; oxidative stress transcriptional regulatory protein K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D YE3402 iciA; chromosome initiation inhibitor K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D YE0655 leuO; LysR-family transcriptional regulator LeuO K05798 leuO; LysR family transcriptional regulator, transcriptional activator for leuABCD operon
D YE2198 cysB; cys regulon transcriptional activator K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator
D YE2474 putative LysR-family transcriptional regulatory protein K13635 cbl; LysR family transcriptional regulator, cys regulon transcriptional activator
D YE2441 ampR; transcriptional activator protein K17850 ampR; LysR family transcriptional regulator, regulator of gene expression of beta-lactamase
D YE3797 probable lysR-family transcriptional regulatory protein K21698 aaeR; LysR family transcriptional regulator, transcriptional activator for aaeXAB operon
D YE0145 LysR-family transcriptional regulatory protein K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator
D YE1474 deoR; deoxyribose operon repressor K11534 deoR; DeoR family transcriptional regulator, deoxyribose operon repressor
D YE3987 glpR; glycerol-3-phosphate repressor protein K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D YE2448 agaR; DeoR-family regulatory protein K02081 agaR; DeoR family transcriptional regulator, aga operon transcriptional repressor
D YE1093 gutR; putative glucitol operon repressor K02468 srlR; DeoR family transcriptional regulator, glucitol operon repressor
D YE2591 lacI; lactose operon repressor K27069 lacI; LacI family transcriptional regulator, lactose operon repressor
D YE0012A rbsR; ribose operon repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D YE2816 galS; mgl repressor and galactose ultrainduction factor K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D YE3331 galR; galactose operon repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D YE4118 putative AraC-family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D YE3589 LacI family regulatory protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D YE0107 cytR; transcriptional repressor K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D YE0661 fruR; putative fructose repressor K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor
D YE0550A scrR; sucrose operon repressor K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor
D YE3775 treR; trehalose operon repressor K03485 treR; LacI family transcriptional regulator, trehalose operon repressor
D YE1255 ascG; putative regulatory protein K03487 ascG; LacI family transcriptional regulator, asc operon repressor
D YE2158 purR; purine nucleotide synthesis repressor K03604 purR; LacI family transcriptional regulator, purine nucleotide synthesis repressor
D YE4022 gntR; gluconate utilization system Gnt-I transcriptional repressor K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
D YE1364 putative LacI-family transcriptional regulatory protein K06146 idnR; LacI family transcriptional regulator, gluconate utilization system Gnt-II transcriptional activator
D YE2012 malI; maltose regulon regulatory protein K16136 malI; LacI family transcriptional regulator, maltose regulon regulatory protein
D YE3200 GntR family transcription regulatory protein K03482 yidP; GntR family transcriptional regulator, glv operon transcriptional regulator
D YE0478 phnF; probable gntR-family transcriptional regulatory protein K02043 phnF; GntR family transcriptional regulator, phosphonate transport system regulatory protein
D YE2460 hutC; putative GntR-family transcriptional regulatory protein K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor
D YE2283 fadR; fatty acid metabolism regulatory protein K03603 fadR; GntR family transcriptional regulator, negative regulator for fad regulon and positive regulator of fabA
D YE0698 pdhR; pyruvate dehydrogenase complex repressor K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D YE1437 putative transcriptional regulatory protein K13637 uxuR; GntR family transcriptional regulator, uxu operon transcriptional repressor
D YE3710 exuR; exu regulon transcriptional regulator K19775 exuR; GntR family transcriptional regulator, hexuronate regulon transcriptional repressor
D YE2670 putative GntR-family regulatory protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D YE0931 putative GntR-family transcriptional regulatory protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D YE3099 acrR; putative tetR-family transcriptional regulatory protein K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor
D YE0060 ttk; TetR-family regulatory protein K05501 slmA; TetR/AcrR family transcriptional regulator
D YE1951 putative TetR-family transcriptional regulatory protein K09017 rutR; TetR/AcrR family transcriptional regulator
D YE2151 TetR-family transcriptional regulatory protein K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D YE2672 TetR family transcription regulatory protein K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D YE0135 TetR-family transcriptional regulatory protein K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator
D YE2890 TetR family transcription regulatory protein K23777 cecR; TetR/AcrR family transcriptional regulator, regulator of cefoperazone and chloramphenicol sensitivity
D YE0002 asnC; regulatory protein K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D YE1524 lrp; leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D YE2597 AsnC-family transcriptional regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D YE3123 probable AsnC-family regulatory protein K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
D YE1026 LuxR-family transcriptional regulator K19734 expR; LuxR family transcriptional regulator, quorum-sensing system regulator ExpR
D YE1599 yenR; quorum-sensing transcriptional activator K19734 expR; LuxR family transcriptional regulator, quorum-sensing system regulator ExpR
D YE3990 malT; maltose regulon positive regulatory protein K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein
D YE2144 rovA; MarR-family transcriptional regulatory protein K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D YE3240 emrR; MarR-family transcriptional regulatory protein K15974 emrR; MarR family transcriptional regulator, negative regulator of the multidrug operon emrRAB
D YE3060 cueR; putative regulatory protein K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D YE3895 MerR-family transcriptional regulator K13638 zntR; MerR family transcriptional regulator, Zn(II)-responsive regulator of zntA
D YE2973 fur; ferric uptake regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D YE3853 putative regulatory protein K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D YE3876 Putative IclR family transcriptional regulator K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D YE1877 kdgR; IclR-family transcriptional regulatory protein K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D YE3955 crp; cAMP-regulatory protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D YE2075 fnr; fumarate and nitrate reduction regulatory protein K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D YE1056 conserved hypothetical protein K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D YE0383 conserved hypothetical protein K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D YE3366 arsR; arsenical resistance operon repressor K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D YE3472 arsR2; arsenical resistance operon repressor K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D YE1970 putative DNA-binding protein K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization
D YE3688 RpiR family regulatory protein K15835 murR; RpiR family transcriptional regulator, murPQ operon repressor
D YE2384 hexR; hex regulon repressor K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D YE0275 birA; bifunctional protein BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D YE3817 fiS; DNA-binding protein Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D YE0590 trpR; putative trp operon repressor K03720 trpR; TrpR family transcriptional regulator, trp operon repressor
D YE1026A sfsB; putative DNA-binding protein K07724 ner; Ner family transcriptional regulator
D YE0644 conserved hypothetical protein K11925 sgrR; SgrR family transcriptional regulator
D YE0580 nadR; transcriptional regulator NadR K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22]
D YE3842 putative transcriptional regulator K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D YE2811 hyfR; putative hydrogenlyase transcriptional activator K15836 fhlA; formate hydrogenlyase transcriptional activator
D YE2914 modE; molybdenum transport protein ModE K02019 modE; molybdate transport system regulatory protein
D YE0110 metJ; transcriptional repressor protein K03764 metJ; MetJ family transcriptional regulator, methionine regulon repressor
D YE1933 putA; bifunctional PutA protein [includes: proline dehydrogenase and delta-1-pyrroline-5-carboxylate K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D YE0510 relB; RelB protein K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
D YE2105 arbG; beta-glucoside operon antiterminator K03488 licT; beta-glucoside operon transcriptional antiterminator
D YE3137 bolA; BolA protein K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D YEP0061 putative plasmid partitioning control protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D YE0264 rfaH; putative regulatory protein K05785 rfaH; transcriptional antiterminator RfaH
D YE0413 argR; arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D YE2981 nagC; putative N-acetylglucosamine regulatory protein K02565 nagC; N-acetylglucosamine repressor
D YE2023 mlc; putative ROK family transcriptional regulatory protein K15545 mlc; transcriptional regulator of PTS gene
D YE4146 mtlR; mannitol operon repressor K02562 mtlR; mannitol operon repressor
D YE2114 tyrR; transcriptional regulatory protein K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport
D YE1136 gcvR; glycine cleavage system transcriptional repressor K03567 gcvR; glycine cleavage system transcriptional repressor
D YE2122 pspF; psp operon transcriptional activator K03974 pspF; psp operon transcriptional activator
D YE2119 pspC; phage shock protein C K03973 pspC; phage shock protein C
D YE0529 putative transcriptional regulatory protein K11531 lsrR; lsr operon transcriptional repressor
D YE0550 dhaR; glycerol metabolism operon regulatory protein K05880 dhaR; transcriptional activator for dhaKLM operon
D YE3787 rnk; regulator of nucleoside diphosphate kinase K06140 rnk; regulator of nucleoside diphosphate kinase
D YE0975A conserved hypothetical protein K07733 alpA; prophage regulatory protein
D YE3428 conserved hypothetical protein K07735 algH; putative transcriptional regulator
D YE0725 dksA; DnaK suppressor protein homologue K06204 dksA; RNA polymerase-binding transcription factor
D YE3162 conserved hypothetical protein K07738 nrdR; transcriptional repressor NrdR
D YE3203 crl; curlin genes regulatory protein K11926 crl; sigma factor-binding protein Crl
D YE0663 conserved hypothetical protein K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:yen03021]
D YE3898 rpoA; DNA-directed RNA polymerase alpha chain K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D YE0286 rpoB; DNA-directed RNA polymerase beta chain K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D YE0287 rpoC; DNA-directed RNA polymerase beta' chain K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D YE0046 rpoZ; DNA-directed RNA polymerase, omega chain K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D YE3684 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D YE0775 rpoS; RNA polymerase sigma factor RpoS K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
D YE2840 putative RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D YE1010 rpoE; RNA polymerase sigma E factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D YE0228 rpoH; RNA polymerase sigma-32 factor K03089 rpoH; RNA polymerase sigma-32 factor
D YE3759 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D YE2519 fliA; RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
D YE0636 rapA; RNA polymerase associated helicase K03580 hepA; ATP-dependent helicase HepA [EC:5.6.2.-]
D YE0433 nusA; N utilization substance protein A K02600 nusA; transcription termination/antitermination protein NusA
D YE3159 nusB; N utilization substance protein B K03625 nusB; transcription antitermination protein NusB
D YE0280 nusG; transcription antitermination protein K02601 nusG; transcription termination/antitermination protein NusG
D YE3739 sspA; putative stringent starvation protein A K03599 sspA; stringent starvation protein A
D YE3738 sspB; putative stringent starvation protein B K03600 sspB; stringent starvation protein B
D YE1011 rseA; sigma E factor negative regulatory protein K03597 rseA; sigma-E factor negative regulatory protein RseA
D YE1012 rseB; sigma E factor regulatory protein K03598 rseB; sigma-E factor negative regulatory protein RseB
D YE1013 rseC; sigma E factor regulatory protein K03803 rseC; sigma-E factor negative regulatory protein RseC
D YE0725 dksA; DnaK suppressor protein homologue K06204 dksA; RNA polymerase-binding transcription factor
D YE0425 greA; transcription elongation factor K03624 greA; transcription elongation factor GreA
D YE4003 greB; transcription elongation factor K04760 greB; transcription elongation factor GreB
D YE0168 rho; transcription termination factor K03628 rho; transcription termination factor Rho
D YE3263 conserved hypothetical protein K19000 rof; Rho-binding antiterminator
C 03019 Messenger RNA biogenesis [BR:yen03019]
D YE1627 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D YE3801 cafA; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D YE1017 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D YE0384 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D YE0369 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D YE0166 rhlB; putative DEAD-box helicase K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D YE2889 rhlE; putative ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D YE0440 deaD; cold-shock dead-box protein A K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D YE0204 recQ; ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D YE0747 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D YE0438 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D YE0168 rho; transcription termination factor K03628 rho; transcription termination factor Rho
D YE0089 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D YE0609 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D YE0354 groEL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D YE0377 ymr; yersinia multiple regulator K03666 hfq; host factor-I protein
D YE1120 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D YE0723 pcnB; poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D YE3320 conserved hypothetical protein K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D YE0835 csrA; carbon storage regulator K03563 csrA; carbon storage regulator
D YE3806 yhdA; putative exported protein K18765 csrD; RNase E specificity factor CsrD
D YE0102 menG; S-adenosylmethionine:2-demethylmenaquinone methyltransferase K02553 rraA; regulator of ribonuclease activity A
D YE0495 conserved hypothetical protein K09893 rraB; regulator of ribonuclease activity B
D YE3762 conserved hypothetical protein K06958 rapZ; RNase adapter protein RapZ
D YE2090 hrpA; ATP-dependent helicase K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
D YE0728 hrpB; ATP-dependent helicase K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
D misc_RNA.23 RprA (RF00034) as predicted by Rfam, score 40.71,positions 1 to 108 K18518 rprA; small regulatory RNA RprA
C 03041 Spliceosome
C 03011 Ribosome [BR:yen03011]
D YE1540 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D YE3284 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D YE3917 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D YE3899 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D YE3906 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D YE0392 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D YE3929 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D YE3909 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D YE3740 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D YE3924 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D YE3900 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D YE3930 rpsl; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D YE3901 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D YE3910 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D YE0437 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D YE0843 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D YE3914 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D YE0394 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D YE3919 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D YE0613 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D YE3682 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D YE0282 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D YE3920 rplB; 50S ribosomal protein l2 K02886 RP-L2; large subunit ribosomal protein L2
D YE3923 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D YE3922 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D YE3911 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D YE3908 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D YE0395 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D YE0283 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D YE0281 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D YE0284 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D YE3741 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D YE3913 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D YE3904 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D YE3916 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D YE3897 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D YE3907 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D YE0846 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D YE1915 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D YE0418 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D YE3918 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D YE3921 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D YE3912 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D YE0419 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D YE0064 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D YE3915 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D YE3905 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D YE0109 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D YE3107 ykgM; putative ribosomal protein K02909 RP-L31; large subunit ribosomal protein L31
D YE1631 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D YE0065 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D YE4175 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D YE1914 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D YE3902 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D YE3108 putative ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D YE1422 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D 5S_rRNA-2 5S_rRNA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 5S_rRNA-1 5S_rRNA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 5S_rRNA-8 5S_rRNA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 5S_rRNA-6 5S_rRNA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 5S_rRNA-4 5S_rRNA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 5S_rRNA-3 5S_rRNA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 5S_rRNA-5 5S_rRNA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 5S_rRNA-7 5S_rRNA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 16S_rRNA-6 16S_rRNA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D 16S_rRNA-1 16S_rRNA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D 16S_rRNA-2 16S_rRNA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D 16S_rRNA-7 16S_rRNA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D 16S_rRNA-3 16S_rRNA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D 16S_rRNA-4 16S_rRNA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D 16S_rRNA-5 16S_rRNA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D 23S_rRNA-2 23S_rRNA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D 23S_rRNA-3 23S_rRNA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D 23S_rRNA-1 23S_rRNA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D 23S_rRNA-6 23S_rRNA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D 23S_rRNA-4 23S_rRNA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D 23S_rRNA-5 23S_rRNA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D 23S_rRNA-7 23S_rRNA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:yen03009]
D YE1017 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D YE1747 conserved hypothetical protein K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
D YE0369 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D YE1018 era; putative GTP-binding protein K03595 era; GTPase
D YE0421 putative GTP-binding protein K03979 obgE; GTPase [EC:3.6.5.-]
D YE0725 dksA; DnaK suppressor protein homologue K06204 dksA; RNA polymerase-binding transcription factor
D YE0433 nusA; N utilization substance protein A K02600 nusA; transcription termination/antitermination protein NusA
D YE3159 nusB; N utilization substance protein B K03625 nusB; transcription antitermination protein NusB
D YE0280 nusG; transcription antitermination protein K02601 nusG; transcription termination/antitermination protein NusG
D YE1424 rsuA; ribosomal small subunit pseudouridine synthase A K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D YE0630 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D YE3891 conserved hypothetical protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D YE0561 rsmC; ribosomal RNA small subunit methyltransferase C K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D YE0224 conserved hypothetical protein K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D YE3426 conserved hypothetical protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D YE4214 gidB; glucose inhibited division protein B K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D YE0664 conserved hypothetical protein K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D YE3726 putative tetrapyrrole methylase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D YE4053 conserved hypothetical protein K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242]
D YE1768 rrmA; rRNA (guanine-N1-)-methyltransferase K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
D YE0385 putative methylase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D YE0427 ftsJ; ribosomal RNA large subunit methyltransferase J K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D YE2849 conserved hypothetical protein K06970 rlmF; 23S rRNA (adenine1618-N6)-methyltransferase [EC:2.1.1.181]
D YE3699 putative methyltransferase K11391 rlmG; 23S rRNA (guanine1835-N2)-methyltransferase [EC:2.1.1.174]
D YE3001 conserved hypothetical protein K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D YE1593 conserved hypothetical protein K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D YE4055 conserved hypothetical protein K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D YE1571 conserved hypothetical protein K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173]
D YE3298 conserved hypothetical protein K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186]
D YE1070 conserved hypothetical protein K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D YE0743 rumA; 23s rRNA (uracil-5-)-methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D YE1490 putative RNA methyltransferase K03212 rumB; 23S rRNA (uracil747-C5)-methyltransferase [EC:2.1.1.189]
D YE2636 rluA; putative ribosomal large subunit pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D YE0635 rluA; ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D YE2206 putative RNA pseudouridylate synthase-family protein K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D YE1628 rluC; ribosomal large subunit pseudouridine synthase C K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D YE0891 rluD; ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D YE1724 ymfC; putative pseudouridine synthase K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D YE1843 conserved hypothetical protein K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
D YE3244 putative trna/rRNA methyltransferase K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-]
D YE0563 rimI; ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D YE2412 rimJ; ribosomal-protein-alanine acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
D YE0844 rimM; 16S rRNA processing protein K02860 rimM; 16S rRNA processing protein RimM
D YE1150 hypothetical protein K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor
D YE1534 conserved hypothetical protein K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor
D YE3815 prmA; ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D YE1280 conserved hypothetical protein K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
D YE1716 conserved hypothetical protein K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
D YE3022 conserved hypothetical protein K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
D YE1627 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D YE3801 cafA; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D YE3429 conserved hypothetical protein K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D YE1785 dbpA; ATP-dependent RNA helicase K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6]
D YE0440 deaD; cold-shock dead-box protein A K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D YE1007 srmB; ATP-dependent RNA helicase K05590 srmB; ATP-dependent RNA helicase SrmB [EC:5.6.2.7]
D YE0368 conserved hypothetical protein K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D YE1077 engA; putative GTP-binding protein K03977 engA; GTPase
D YE0378 hflX; GTP-binding protein K03665 hflX; GTPase
D YE3885 conserved hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D YE0045 spoT; guanosine-3',5'-bisbis(diphosphate) 3'-pyrophosphydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D YE0435 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D YE0432 conserved hypothetical protein K09748 rimP; ribosome maturation factor RimP
D YE3046 conserved hypothetical protein K14761 rlbA; ribosome-associated protein
D YE3000 conserved hypothetical protein K09710 ybeB; ribosome-associated protein
D YE2987 conserved hypothetical protein K07042 ybeY; probable rRNA maturation factor
D YE0426 conserved hypothetical protein K07574 yhbY; RNA-binding protein
D YE4143 conserved hypothetical protein K14762 yibL; ribosome-associated protein
D YE3790 conserved hypothetical protein K09889 yjgA; ribosome-associated protein
D YE3760 yhbH; probable sigma (54) modulation protein K05808 hpf; ribosome hibernation promoting factor
D YE0889 yfiA; putative sigma 54 modulation protein K05809 raiA; ribosome-associated inhibitor A
D YE2439 conserved hypothetical protein K06942 ychF; ribosome-binding ATPase
D YE1630 conserved hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:yen03016]
D YE3677 cca; tRNA nucleotidyltransferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D YE1215 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D YE3258 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D YE0616 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D YE2996 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D YE2785 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D YE2977 glnS; glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D YE2406 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D YE3374 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D YE2397 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D YE0834 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D YE1564 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D YE1912 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D YE1528 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D YE3048 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D YE0498 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D YE1074 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D YE1916 pheS; phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D YE1917 pheT; phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D YE2139 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D YE3969 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D YE0032 conserved hypothetical protein K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D YE1701 conserved hypothetical protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D YE3442 Putative methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D YE3257 conserved hypothetical protein K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
D YE1309 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D YE0436 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D YE0771 conserved hypothetical protein K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D YE1057 iscS; putative aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D YE3885 conserved hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D YE0376 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D YE4178 thdF; putative thiophene and furan oxidation protein K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D YE4215 gidA; glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D YE2258 selD; selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D YE0400 cysQ; inositol monophosphatase family protein K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D YE4176 rnpA; ribonuclease P protein K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D YE2154 rnt; ribonuclease T K03683 rnt; ribonuclease T [EC:3.1.13.-]
D YE0058 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D YE1982 rnb; exoribonuclease II K01147 rnb; exoribonuclease II [EC:3.1.13.1]
D YE2374 rnd; ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D YE0727 ligT; putative 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D YE0584 ABC transporter protein, ATP-binding component K06020 ettA; energy-dependent translational throttle protein EttA
D YE4151 glyQ; glycyl-tRNA synthetase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D YE4150 glyS; glycyl-tRNA synthetase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D YE0724 yadB; putative glutamyl-tRNA synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D YE3063 conserved hypothetical protein K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D YE1030 putative zinc-binding protein K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D YE3852 conserved hypothetical protein K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D YE3816 conserved hypothetical protein K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D YE2886 conserved hypothetical protein K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-]
D YE2985 miaB; putative tRNA-thiotransferase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D YE2401 conserved hypothetical protein K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
D YE2402 conserved hypothetical protein K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-]
D YE1553 smtA; putative methyltransferase K06219 smtA; tRNA 5-carboxymethoxyuridine methyltransferase [EC:2.1.1.-]
D YE0138 trmA; tRNA (uracil-5)-methyltransferase K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]
D YE0845 trmD; tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D YE3244 putative trna/rRNA methyltransferase K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-]
D YE0044 trmH; tRNA (guanosine-2'-O-)-methyltransferase K00556 trmH; tRNA (guanosine-2'-O-)-methyltransferase [EC:2.1.1.34]
D YE1055 putative SpoU-family rRNA methylase K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200]
D YE0083 putative methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D YE1008 conserved hypothetical protein K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223]
D YE3290 Conserved hypothetical protein K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26]
D YE2636 rluA; putative ribosomal large subunit pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D YE0635 rluA; ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D YE1722 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D YE2106 conserved hypothetical protein K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D YE0217 conserved hypothetical protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D YE3931 conserved hypothetical protein K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D YE3932 conserved hypothetical protein K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D YE3933 conserved hypothetical protein K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D YE1597 putative sulfite reductase subunit protein K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D YE1059 conserved hypothetical protein K13628 iscA; iron-sulfur cluster assembly protein
D YE3387 conserved hypothetical protein K06980 ygfZ; tRNA-modifying protein YgfZ
D YE1286 conserved hypothetical protein K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
D YE3172 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D YE3127 conserved hypothetical protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D YE0754 ygcM; putative 6-pyruvoyl tetrahydrobiopterin synthase family protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D YE0753 conserved hypothetical protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D YE3295 conserved hypothetical protein K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D YE0371 putative iron-sulfur cluster-binding protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D YE3166 tgt; queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D YE3151 thiI; thiamine biosynthesis protein K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D YE3265 conserved hypothetical protein K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D YE1143 putative acetyltransferase K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193]
D YE2377 conserved hypothetical protein K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D YE3681 gcp; putative glycoprotease K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D YE0373 conserved hypothetical protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D YE3305 conserved hypothetical protein K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D YE0384 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D YE0438 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D YE1658 conserved hypothetical phage protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D YE4141 Hypothetical protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
C 03012 Translation factors [BR:yen03012]
D YE1974 translation initiation factor SUI1 family protein K03113 EIF1; translation initiation factor 1
D YE0434 infB; translation initiation factor IF2-2 K02519 infB; translation initiation factor IF-2
D YE1913 infC; translation initiation factor K02520 infC; translation initiation factor IF-3
D YE3942 Putative ATPase component of an ABC transporter K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D YE3283 tsf; elongation factor Ts K02357 tsf; elongation factor Ts
D YE3927 tufA; elongation factor Tu K02358 tuf; elongation factor Tu
D YE0278 tufA; elongation factor TU K02358 tuf; elongation factor Tu
D YE0808 fusA; elongation factor G K02355 fusA; elongation factor G
D YE3928 fusA; elongation factor G K02355 fusA; elongation factor G
D YE4130 selB; selenocysteinyl-tRNA-specific translation factor K03833 selB; selenocysteine-specific elongation factor
D YE2431 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D YE3281 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D YE2430 putative protoporphyrinogen oxidase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D YE2437 pth; peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D YE1519 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D YE1441 putative elongation factor P K02356 efp; elongation factor P
D YE0357 efP; elongation factor P K02356 efp; elongation factor P
D YE0365 poxA; putative lysyl-tRNA synthetase K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-]
D YE0356 conserved hypothetical protein K19810 epmB; L-lysine 2,3-aminomutase [EC:5.4.3.-]
D YE1284 conserved hypothetical protein K09906 epmC; elongation factor P hydroxylase [EC:1.14.-.-]
D YE3376 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D YE0564 prfC; peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
D YE3894 conserved hypothetical protein K09890 arfA; alternative ribosome-rescue factor
D YE3260 conserved hypothetical protein K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:yen03110]
D YE1518 clpA; ATP-dependent Clp protease ATP-binding subunit K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D YE0893 clpB; Clp ATPase K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D YE3133 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D YE0104 hslU; ATP-binding heat shock protein K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D YE3090 htpG; heat shock protein HtpG K04079 HSP90A; molecular chaperone HtpG
D YE0609 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D YE1061 hscA; chaperone protein HscA K04044 hscA; molecular chaperone HscA
D YE1115 putative heat shock protein K04046 yegD; hypothetical chaperone protein
D YE0354 groEL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D YE0610 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D YE3356 putative DNA-binding protein K05516 cbpA; curved DNA-binding protein
D YE0634 djlA; DnaJ-like protein K05801 djlA; DnaJ like chaperone protein
D YE1060 hscB; chaperone protein HscB K04082 hscB; molecular chaperone HscB
D YE3985 hslO; heat-shock chaperonin K04083 hslO; molecular chaperone Hsp33
D YE1000 heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D YE4164 ibpA; heat shock protein K04080 ibpA; molecular chaperone IbpA
D YE4163 ibpB; heat shock protein K04081 ibpB; molecular chaperone IbpB
D YE3984 hslR; heat shock protein 15 K04762 hslR; ribosome-associated heat shock protein Hsp15
D YE0353 groES; 10 kDa chaperonin K04078 groES; chaperonin GroES
D YE0741 gsrA; global stress requirement protein GsrA K04771 degP; serine protease Do [EC:3.4.21.107]
D YE0428 ftsH; cell division protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D YE4212 atpB; ATP synthase subunit B protein K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D YE0160 putative fimbrial chaperone K07346 fimC; fimbrial chaperone protein
D YE1858 putative chaperone protein K07346 fimC; fimbrial chaperone protein
D YE0080 secB; protein-export protein K03071 secB; preprotein translocase subunit SecB
D YE0087 cpxP; putative exported protein K06006 cpxP; periplasmic protein CpxP/Spy
D YE0960 putative exported protein K19778 hdeB; acid stress chaperone HdeB
D YE1745 putative exported protein K19778 hdeB; acid stress chaperone HdeB
D YE3603a hybF; hydrogenase expression/formation protein K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D YE2797 hypA; putative hydrogenase nickel incorporation protein K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D YE3603 hypB; hydrogenase isoenzymes nickel incorporation protein K04652 hypB; hydrogenase nickel incorporation protein HypB
D YE2974 chb; chitobiase precursor K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D YE3960 ppiA; peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D YE3049 ppiB; peptidyl-prolyl cis-trans isomerase B K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D YE3130 ppiD; peptidyl-prolyl cis-trans isomerase D K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D YE3935 fkpA; peptidyl-prolyl cis-trans isomerase K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D YE0398 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8]
D YE0618 fkpB; FKBP-type peptidyl-prolyl cis-trans isomerase K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8]
D YE3938 slyD; peptidyl-prolyl cis-trans isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D YE0162 ppiC; peptidyl-prolyl cis-trans isomerase C K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D YE0632 surA; survival protein SurA precursor (peptidyl-prolyl cis-trans isomerase) K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D YE0167 trxA; thioredoxin 1 K03671 TXN; thioredoxin
D YE3245 trxC; thioredoxin 2 K03672 trxC; thioredoxin 2 [EC:1.8.1.8]
D YE3057 ybbN; putative thioredoxin K05838 ybbN; putative thioredoxin
D YE1479 grxA; glutaredoxin 1 K03674 grxA; glutaredoxin 1
D YE0079 grxC; glutaredoxin K03676 grxC; glutaredoxin 3
D YE2155 conserved hypothetical protein K07390 grxD; monothiol glutaredoxin
D YE0020 dsbA; secreted thiol:disulfide interchange protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D YE0789 putative thiol:disulfide interchange protein K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D YE2285 dsbB; disulfide bond formation protein B K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9]
D YE3379 dsbC; thiol:disulfide interchange protein (DsbC) K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D YE0348 dsbD; thiol:disulfide interchange protein K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16]
D YE1269 ccmG; thiol:disulfide interchange protein DsbE K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
C 04131 Membrane trafficking [BR:yen04131]
D YE1069 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D YE3473 arsA2; arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D YE2265 gapA; glyceraldehyde 3-phosphate dehydrogenase A K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D YE2924 gpmA; phosphoglycerate mutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D YE2385 pykA; pyruvate kinase II K00873 PK; pyruvate kinase [EC:2.7.1.40]
D YE2164 pykF; pyruvate kinase I K00873 PK; pyruvate kinase [EC:2.7.1.40]
D YE3090 htpG; heat shock protein HtpG K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system [BR:yen04121]
C 03051 Proteasome [BR:yen03051]
D YE3090 htpG; heat shock protein HtpG K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:yen03032]
D YE0921 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D YE1681 prophage encoded DNA modification methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D YE2362 dcm; putative cytosine-specific modification methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D YE0300 hupA; DNA-binding protein HU-alpha K05787 hupA; DNA-binding protein HU-alpha
D YE3131 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D YE1918 ihfA; integration host factor alpha-subunit K04764 ihfA; integration host factor subunit alpha
D YE1541 ihfB; integration host factor beta-subunit K05788 ihfB; integration host factor subunit beta
D YE4173 dnaA; chromosomal replication initiator protein K02313 dnaA; chromosomal replication initiator protein
D YE3514 dnaB2; putative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D YE3849 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D YE3683 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D YE3844 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D YE3269 dnaE; DNA polymerase III, alpha chain K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D YE4172 dnaN; DNA polymerase III, beta subunit protein K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D YE0499 holC; DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D YE2998 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D YE1641 holB; DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D YE0922 dnaQ; DNA polymerase III, epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D YE3093 dnaX; DNA polymerase III subunit Tau (contains DNA polymerase III subunit Gamma) K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D YE0562 holD; DNA polymerase III, psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D YE1794 holE; DNA polymerase III, theta subunit K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D YE3270 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D YE0021 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D YE0048 putative DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D YE1211 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D YE2018 tus; DNA replication terminus site-binding protein K10748 tus; DNA replication terminus site-binding protein
D YE3972 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D YE2968 seqA; putative negative regulator of replication initiation K03645 seqA; negative modulator of initiation of replication
D YE1130 conserved hypothetical protein K10763 hda; DnaA-homolog protein
D YE1395 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D YE4170 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D YE3656 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D YE3660 parE; topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D YE2199 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D YE2257 topB; DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:yen03036]
D YE1681 prophage encoded DNA modification methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D YE2362 dcm; putative cytosine-specific modification methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D YE1017 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D YE2241 hns; DNA-binding protein Hns K03746 hns; DNA-binding protein H-NS
D YE0300 hupA; DNA-binding protein HU-alpha K05787 hupA; DNA-binding protein HU-alpha
D YE3131 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D YE1918 ihfA; integration host factor alpha-subunit K04764 ihfA; integration host factor subunit alpha
D YE1541 ihfB; integration host factor beta-subunit K05788 ihfB; integration host factor subunit beta
D YE3356 putative DNA-binding protein K05516 cbpA; curved DNA-binding protein
D YE3355 conserved hypothetical protein K18997 cbpM; chaperone modulatory protein CbpM
D YE0593 rob; putative right origin-binding protein K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator
D YE4173 dnaA; chromosomal replication initiator protein K02313 dnaA; chromosomal replication initiator protein
D YE3729 probable phosphosugar isomerase K12961 diaA; DnaA initiator-associating protein
D YE1592 conserved hypothetical protein K11940 hspQ; heat shock protein HspQ
D YE2843 dps; putative DNA-binding protein K04047 dps; starvation-inducible DNA-binding protein
D YE3817 fiS; DNA-binding protein Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D YE0377 ymr; yersinia multiple regulator K03666 hfq; host factor-I protein
D YE3402 iciA; chromosome initiation inhibitor K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D YE1524 lrp; leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D YE2597 AsnC-family transcriptional regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D YE1421 putative nucleoid-associated protein K06899 ndpA; nucleoid-associated protein
D YE1556 mukB; cell division protein K03632 mukB; chromosome partition protein MukB
D YE1555 mukE; conserved hypothetical protein K03804 mukE; chromosome partition protein MukE
D YE1554 mukF; putative killing factor protein K03633 mukF; chromosome partition protein MukF
D YE0676 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D YE0768 conserved hypothetical protein K05589 ftsB; cell division protein FtsB
D YE0226 ftsE; cell division ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein
D YE1767 ftsI2; peptidoglycan synthetase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D YE0666 ftsI; penicillin-binding protein 3 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D YE1525 ftsK; putative cell division protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D YE0665 ftsL; putative cell division protein K03586 ftsL; cell division protein FtsL
D YE0106 ftsN; cell division protein K03591 ftsN; cell division protein FtsN
D YE0675 ftsQ; cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D YE0671 ftsW; cell division protein FtsW K03588 ftsW; cell division protein FtsW
D YE0227 ftsX; cell division protein K09811 ftsX; cell division transport system permease protein
D YE0677 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D YE1210 zipA; putative cell division protein K03528 zipA; cell division protein ZipA
D YE3398 conserved hypothetical protein K09888 zapA; cell division protein ZapA
D YE0101 conserved hypothetical protein K09892 zapB; cell division protein ZapB
D YE1569 conserved hypothetical protein K18657 zapC; cell division protein ZapC
D YE0684 conserved hypothetical protein K18778 zapD; cell division protein ZapD
D YE3742 conserved hypothetical protein K06916 zapE; cell division protein ZapE
D YE0397 putative membrane protein K07269 ytfB; cell division protein YtfB
D YE0374 putative N-acetylmuramoyl-L-alanine amidase-family protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D YE3307 N-acetylmuramoyl-L-alanine amidase AmiC precursor K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D YE0443 multidrug efflux protein K03585 acrA; membrane fusion protein, multidrug efflux system
D YE3100 acrA; multidrug efflux protein K03585 acrA; membrane fusion protein, multidrug efflux system
D YE2371 minC; cell division inhibitor K03610 minC; septum site-determining protein MinC
D YE2372 minD; septum site-determining protein K03609 minD; septum site-determining protein MinD
D YE2373 minE; cell division topological specificity factor K03608 minE; cell division topological specificity factor
D YE1582 sulA; putative cell division inhibitor K13053 sulA; cell division inhibitor SulA
D YE0060 ttk; TetR-family regulatory protein K05501 slmA; TetR/AcrR family transcriptional regulator
D YE2968 seqA; putative negative regulator of replication initiation K03645 seqA; negative modulator of initiation of replication
D YE3805 mreB; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D YE3804 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D YE3803 mreD; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D YE3003 rodA; rod shape-determining protein K05837 rodA; rod shape determining protein RodA
D YEP0072 conserved hypothetical protein K03496 parA; chromosome partitioning protein
D YEP0062 putative plasmid partitioning transcription repressor K03496 parA; chromosome partitioning protein
D YEP0061 putative plasmid partitioning control protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D YE3656 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D YE3660 parE; topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D YE4215 gidA; glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D YE4214 gidB; glucose inhibited division protein B K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D YE0194 xerC; putative integrase/recombinase K03733 xerC; integrase/recombinase XerC
D YE3380 xerD; integrase/recombinase K04763 xerD; integrase/recombinase XerD
D YE2784 conserved hypothetical protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D YE1667 putative Fic-related phage protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D YE4112 conserved ypothetical protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D YE0022 conserved hypothetical protein K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:yen03400]
D YE2074 ogt; putative methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D YE2957 phrB; putative deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D YE1002 ung; putative uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D YE3443 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D YE1987 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D YE0682 mutT; mutator protein MutT K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D YE0061 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D YE0084 bifunctional regulatory protein/DNA repair protein K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D YE3631 alkB; alkylated DNA repair protein K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33]
D YE2529 putative glycosidase K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D YE4152 tag; DNA-3-methyladenine glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D YE0066 mutM; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D YE2254 xthA; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D YE1455 nfo; endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D YE0298 nfi; endonuclease V K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
D YE3378 recJ; single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D YE0048 putative DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D YE1211 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D YE0021 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D YE3845 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D YE2902 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D YE1830 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D YE0196 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D YE0286 rpoB; DNA-directed RNA polymerase beta chain K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D YE0287 rpoC; DNA-directed RNA polymerase beta' chain K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D YE3898 rpoA; DNA-directed RNA polymerase alpha chain K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D YE0046 rpoZ; DNA-directed RNA polymerase, omega chain K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D YE1709 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D YE0776 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D YE0375 mutL; DNA mismatch repair protein K03572 mutL; DNA mismatch repair protein MutL
D YE3322 mutH; DNA mismatch repair protein K03573 mutH; DNA mismatch repair protein MutH
D YE2758 sbcB; exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D YE1080 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D YE3153 xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D YE1790 exoX; putative exodeoxyribonuclease K10857 exoX; exodeoxyribonuclease X [EC:3.1.11.-]
D YE2355 exodeoxyribonuclease K10857 exoX; exodeoxyribonuclease X [EC:3.1.11.-]
D YE3269 dnaE; DNA polymerase III, alpha chain K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D YE4172 dnaN; DNA polymerase III, beta subunit protein K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D YE0499 holC; DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D YE2998 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D YE1641 holB; DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D YE0922 dnaQ; DNA polymerase III, epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D YE3093 dnaX; DNA polymerase III subunit Tau (contains DNA polymerase III subunit Gamma) K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D YE0562 holD; DNA polymerase III, psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D YE1794 holE; DNA polymerase III, theta subunit K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D YE3844 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D YE3972 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D YE3310 recB; exodeoxyribonuclease V beta chain K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D YE3312 recC; exodeoxyribonuclease V gamma chain K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D YE3309 recD; exodeoxyribonuclease V alpha chain K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D YE0829 recA; RecA protein K03553 recA; recombination protein RecA
D YE2393 ruvA; Holliday junction DNA helicase K03550 ruvA; holliday junction DNA helicase RuvA
D YE2392 ruvB; Holliday junction DNA helicase K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D YE2394 ruvC; crossover junction endodeoxyribonuclease K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D YE0108 priA; primosomal protein n' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D YE0393 priB; primosomal replication protein n K02686 priB; primosomal replication protein N
D YE3095 priC; primosomal replication protein n'' K04067 priC; primosomal replication protein N''
D YE3184 sbcC; exonuclease K03546 sbcC; DNA repair protein SbcC/Rad50
D YE3183 sbcD; exonuclease SbcD K03547 sbcD; DNA repair protein SbcD/Mre11
D YE0579 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D YE4171 recF; DNA metabolism protein K03629 recF; DNA replication and repair protein RecF
D YE0043 recG; ATP-dependent DNA helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D YE1019 recO; DNA repair protein K03584 recO; DNA repair protein RecO (recombination protein O)
D YE3091 recR; recombination protein RecR K06187 recR; recombination protein RecR
D YE0998 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D YE3186 rdgC; recombination associated protein RdgC K03554 rdgC; recombination associated protein RdgC
D YE1423 putative DEAD box helicase family protein K19789 radD; DNA repair protein RadD
D YE3959 conserved hypothetical protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D YE1395 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D YE4170 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D YE2199 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D YE0300 hupA; DNA-binding protein HU-alpha K05787 hupA; DNA-binding protein HU-alpha
D YE3131 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D YE3817 fiS; DNA-binding protein Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D YE1918 ihfA; integration host factor alpha-subunit K04764 ihfA; integration host factor subunit alpha
D YE1541 ihfB; integration host factor beta-subunit K05788 ihfB; integration host factor subunit beta
D YE0204 recQ; ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D YE2241 hns; DNA-binding protein Hns K03746 hns; DNA-binding protein H-NS
D YE3207 dinP; DNA-damage-inducible protein P K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D YE1732 umuC; putative uv protection and mutation protein K03502 umuC; DNA polymerase V
D YE1733 umuD; putative uv protection and mutation protein K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D YE3855 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D YE0637 polB; DNA polymerase II K02336 polB; DNA polymerase II [EC:2.7.7.7]
D YE1624 dinI; DNA-damage-inducible protein I K12149 dinI; DNA-damage-inducible protein I
D YE2530 putative DNA-damage-inducible protein K12149 dinI; DNA-damage-inducible protein I
D YE0833 recX; putative regulatory protein K03565 recX; regulatory protein
D YE0163 rep; ATP-dependent DNA helicase Rep K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
D YE1586 putative helicase IV K03658 helD; DNA helicase IV [EC:5.6.2.4]
D YE2855 dinG; putative ATP-dependent helicase DinG K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D YE2378 putative DEAD box family helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D YE0927 nrdE; ribonucleoside-diphosphate reductase 2 alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D YE1393 nrdA; ribonucleoside-diphosphate reductase 1 alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D YE1392 nrdB; ribonucleoside-diphosphate reductase 1 beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D YE0926 nrdF; ribonucleoside-diphosphate reductase 2 beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:yen03029]
D YE0434 infB; translation initiation factor IF2-2 K02519 infB; translation initiation factor IF-2
D YE1913 infC; translation initiation factor K02520 infC; translation initiation factor IF-3
D YE3283 tsf; elongation factor Ts K02357 tsf; elongation factor Ts
D YE3927 tufA; elongation factor Tu K02358 tuf; elongation factor Tu
D YE0278 tufA; elongation factor TU K02358 tuf; elongation factor Tu
D YE0808 fusA; elongation factor G K02355 fusA; elongation factor G
D YE3928 fusA; elongation factor G K02355 fusA; elongation factor G
D YE1018 era; putative GTP-binding protein K03595 era; GTPase
D YE2139 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D YE2996 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D YE2397 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D YE2406 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D YE2923 nucA; DNA/RNA non-specific endonuclease K01173 ENDOG; endonuclease G, mitochondrial
D YE3844 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D YE3276 putative surface antigen K07277 SAM50; outer membrane protein insertion porin family
D YE0609 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D YE1000 heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D YE0354 groEL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D YE0353 groES; 10 kDa chaperonin K04078 groES; chaperonin GroES
D YE0610 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D YE1057 iscS; putative aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D YE1060 hscB; chaperone protein HscB K04082 hscB; molecular chaperone HscB
D YE2155 conserved hypothetical protein K07390 grxD; monothiol glutaredoxin
D YE2784 conserved hypothetical protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D YE3145 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D YE4177 yidC; probable membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D YE3090 htpG; heat shock protein HtpG K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:yen02000]
D YE2615 ybtP; lipoprotein inner membrane ABC-transporter K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D YE2614 ybtQ; inner membrane ABC-transporter YbtQ K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D YE1543 msbA; probable transport ATP-binding protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D YE3122 mdlA; probable ABC transporter (ATP-binding protein) K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D YE3121 mdlB; probable ATP transporter (ATP-binding protein) K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D YE1998 putative RTX-family toxin transporter K12530 rtxB; ATP-binding cassette, subfamily B, bacterial RtxB
D YE2000 putative toxin transport protein K12531 rtxE; ATP-binding cassette, subfamily B, bacterial RtxE
D YE1696 putative ABC transport protein, ATP-binding component K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D YE3019 putative ABC transport protein K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D YE1748 putative ABC transporter (ATP-binding protein) K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D YE0127 ABC transporter protein K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D YE1521 cydC; transport ATP-binding protein K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D YE1522 cydD; transport ATP-binding protein K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D YE1515 putative ABC transporter ATP-binding protein K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D YE1199 putative ABC transporter, ATP-binding protein K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D YE0793 ABC transporter, ATP-binding component K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D YE0319 putative membrane transport protein ATP-binding component K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein
D YE1572 uup; ABC transporter ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein
D YE1194 cysP; thiosulfate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D YE0091 sbp1; exported sulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D YE1195 cysT; sulfate transport system permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D YE1196 cysW; sulfate transport system permease protein CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D YE1197 cysA; sulfate transport ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D YE2913 modA; molybdate-binding periplasmic protein precursor K02020 modA; molybdate transport system substrate-binding protein
D YE2912 modB; molybdenum transport system permease protein ModB K02018 modB; molybdate transport system permease protein
D YE2911 modC; molybdenum transport ATP-binding protein ModC K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D YE2915 modF; putative molybdenum transport ATP-binding protein modF K05776 modF; molybdate transport system ATP-binding protein
D YE3948 tauA; putative taurine-binding periplasmic protein precursor K15551 tauA; taurine transport system substrate-binding protein
D YE3946 tauC; putative taurine transport system permease protein K15552 tauC; taurine transport system permease protein
D YE3947 tauB; putative taurine transport ATP-binding protein K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]
D YE1241 yfuA; iron(III)-binding periplasmic protein K02012 afuA; iron(III) transport system substrate-binding protein
D YE2659 extracellular solute-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D YE1240 yfuB; iron(III)-transport system permease K02011 afuB; iron(III) transport system permease protein
D YE2660 putative binding protein-dependent transport system, inner-membrane component K02011 afuB; iron(III) transport system permease protein
D YE2661 ferric transport ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D YE1239 yfuC; iron(III)-transport ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D YE0642 tbpA; thiamine-binding periplasmic protein K02064 thiB; thiamine transport system substrate-binding protein
D YE0641 thiP; thiamine transport system permease protein K02063 thiP; thiamine transport system permease protein
D YE0640 thiQ; thiamine transport ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D YE1484 potF; putrescine-binding periplasmic protein precursor K11073 potF; putrescine transport system substrate-binding protein
D YE1487 potI; putrescine transport system permease protein K11074 potI; putrescine transport system permease protein
D YE1486 potH; putrescine transport system permease protein K11075 potH; putrescine transport system permease protein
D YE1485 potG; putrescine transport ATP-binding protein K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D YE0923 proX; glycine betaine-binding periplasmic protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D YE0924 proW; glycine betaine/L-proline transport system permease K02001 proW; glycine betaine/proline transport system permease protein
D YE0925 proV; glycine betaine/L-proline transport ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D YE2865 putative substrate-binding transport protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D YE2862 putative ABC transport integral membrane subunit K05846 opuBD; osmoprotectant transport system permease protein
D YE2864 putative ABC transport integral membrane subunit K05846 opuBD; osmoprotectant transport system permease protein
D YE2863 putative ABC transport ATP-binding subunit K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D YE3866 malE; maltose-binding periplasmic protein precursor K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D YE3867 malF; maltose transport system permease protein MalF K10109 malF; maltose/maltodextrin transport system permease protein
D YE3868 malG; maltose transport system permease protein MalG K10110 malG; maltose/maltodextrin transport system permease protein
D YE3863 malK; maltose/maltodextrin transport ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D YE0463 putative sugar ABC transporter, ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D YE2003 araF; L-arabinose-binding periplasmic protein precursor K10537 araF; L-arabinose transport system substrate-binding protein
D YE2005 araH; L-arabinose transport system permease protein K10538 araH; L-arabinose transport system permease protein
D YE2004 araG; L-arabinose transport ATP-binding protein K10539 araG; L-arabinose transport system ATP-binding protein [EC:7.5.2.12]
D YE1882 putative sugar-binding protein K10192 togB; oligogalacturonide transport system substrate-binding protein
D YE1885 putative ABC sugar transporter (permease) K10193 togM; oligogalacturonide transport system permease protein
D YE1884 putative sugar ABC transporter (permease) K10194 togN; oligogalacturonide transport system permease protein
D YE1883 putative sugar ABC transporter K10195 togA; oligogalacturonide transport system ATP-binding protein
D YE2815 mglB; galactose-binding protein K10540 mglB; methyl-galactoside transport system substrate-binding protein
D YE2813 mglC; galactoside permease K10541 mglC; methyl-galactoside transport system permease protein
D YE2814 mglA; galactoside transport ATP-binding protein K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11]
D YE4121 sugar-binding periplasmic protein K10543 xylF; D-xylose transport system substrate-binding protein
D YE4119 sugar transport system permease protein K10544 xylH; D-xylose transport system permease protein
D YE4120 sugar transport ATP-binding protein K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10]
D YE0011 rbsB; putative D-ribose-binding periplasmic protein precursor K10439 rbsB; ribose transport system substrate-binding protein
D YE2609 ABC transporter, substrate binding component K10439 rbsB; ribose transport system substrate-binding protein
D YE0010 rbsC; putative sugar transport system, permease protein K10440 rbsC; ribose transport system permease protein
D YE2607 putative membrane permease protein K10440 rbsC; ribose transport system permease protein
D YE2606 putative sugar permease K10440 rbsC; ribose transport system permease protein
D YE0009 rbsA; putative ribose transport ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D YE2608 putative sugar transport, ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D YE0141 putative periplasmic protein precursor K23508 ytfQ; galactofuranose transport system substrate-binding protein
D YE0144 putative sugar transport system permease K23509 ytfT; galactofuranose transport system permease protein
D YE0143 putative sugar transport system permease K23509 ytfT; galactofuranose transport system permease protein
D YE0142 putative sugar transport system ATP-binding protein K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9]
D YE0818 putative sugar ABC transporter, periplasmic protein K17202 eryG; erythritol transport system substrate-binding protein
D YE0821 rbsC; putative sugar ABC transporter, permease protein K17203 eryF; erythritol transport system permease protein
D YE0820 putative sugar ABC transporter, ATP-binding protein K17204 eryE; erythritol transport system ATP-binding protein
D YE0241 ugpB; glycerol-3-phosphate-binding periplasmic protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D YE0242 ugpA; sn-glycerol-3-phosphate transport system,permease protein K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D YE0243 ugpE; sn-glycerol-3-phosphate transport system,permease protein K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D YE0244 ugpC; sn-glycerol-3-phosphate transport, ATP-binding protein K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D YE0525 putative periplasmic solute-binding protein K10555 lsrB; AI-2 transport system substrate-binding protein
D YE0527 putative ABC transporter permease protein K10556 lsrC; AI-2 transport system permease protein
D YE0526 putative ABC transporter permease protein K10557 lsrD; AI-2 transport system permease protein
D YE0528 putative ABC transporter ATP-binding protein K10558 lsrA; AI-2 transport system ATP-binding protein
D YE1249 putative exported protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D YE3750 yrbD; putative membrane protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D YE1247 ABC transporter, membrane permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D YE3751 yrbE; putative membrane protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D YE1248 ABC transporter, ATP-binding component K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D YE3752 yrbF; putative ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D YE1250 putative exported protein K18480 linN; cholesterol transport system auxiliary component
D YE3749 yrbC; putative exported protein K07323 mlaC; phospholipid transport system substrate-binding protein
D YE3748 putative anti-sigma B factor antagonist K07122 mlaB; phospholipid transport system transporter-binding protein
D YE0460 putative sugar binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D YE0461 sugar transport system, permease protein K02025 ABC.MS.P; multiple sugar transport system permease protein
D YE0462 sugar transport system, permease protein K02026 ABC.MS.P1; multiple sugar transport system permease protein
D YE2787 putative sugar ABC transporter K02058 ABC.SS.S; simple sugar transport system substrate-binding protein
D YE2751 putative periplasmic binding protein K02058 ABC.SS.S; simple sugar transport system substrate-binding protein
D YE2763 ribose transport system, permease protein K02057 ABC.SS.P; simple sugar transport system permease protein
D YE2753 putative branched-chain amino acid transport system, permease component K02057 ABC.SS.P; simple sugar transport system permease protein
D YE2754 putative ABC transporter, permease protein K02057 ABC.SS.P; simple sugar transport system permease protein
D YE2762 putative ABC transport system ATP-binding protein K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D YE2752 ABC transporter ATP binding protein K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D YE4201 pstS; putative phosphate-binding periplasmic protein K02040 pstS; phosphate transport system substrate-binding protein
D YE4200 pstC; putative phosphate transport system permease K02037 pstC; phosphate transport system permease protein
D YE4199 pstA; putative phosphate transport system permease K02038 pstA; phosphate transport system permease protein
D YE4198 pstB; putative phosphate transport ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D YE2877 putative substrate-binding periplasmic transport protein K02044 phnD; phosphonate transport system substrate-binding protein
D YE2875 putative ABC transport membrane permease K02042 phnE; phosphonate transport system permease protein
D YE2876 putative ABC transport membrane permease K02042 phnE; phosphonate transport system permease protein
D YE2878 putative ABC transport ATP-binding subunit K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D YE1320 hisM; histidine transport system permease protein HisM K10015 hisM; histidine transport system permease protein
D YE1319 hisQ; histidine transport system permease protein HisQ K10016 hisQ; histidine transport system permease protein
D YE2043 amino acid transport system permease protein K10016 hisQ; histidine transport system permease protein
D YE1321 hisP; histidine transport ATP-binding protein HisP K10017 hisP; histidine transport system ATP-binding protein [EC:7.4.2.1]
D YE1318 hisJ; histidine-binding periplasmic protein K10014 hisJ; histidine transport system substrate-binding protein
D YE2044 amino acid-binding periplasmic protein precursor K10014 hisJ; histidine transport system substrate-binding protein
D YE2845 glnH; putative glutamine-binding periplasmic protein K10036 glnH; glutamine transport system substrate-binding protein
D YE2846 glnP; putative glutamine transport system permease K10037 glnP; glutamine transport system permease protein
D YE2847 glnQ; putative glutamine transport ATP-binding protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D YE1491 artJ; arginine-binding periplasmic protein 2 precursor K09996 artJ; arginine transport system substrate-binding protein
D YE1495 artI; arginine-binding periplasmic protein 1 precursor K09997 artI; arginine transport system substrate-binding protein
D YE1493 artM; arginine transport system permease protein K09998 artM; arginine transport system permease protein
D YE1494 artQ; arginine transport system permease protein K09999 artQ; arginine transport system permease protein
D YE1496 artP; arginine transport ATP-binding protein K10000 artP; arginine transport system ATP-binding protein [EC:7.4.2.1]
D YE2991 glnH; putative amino acid-binding protein precursor K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D YE2993 gltK; putative glutamate/aspartate transport system permease K10002 gltK; glutamate/aspartate transport system permease protein
D YE2992 gltJ; putative glutamate/aspartate transport system permease K10003 gltJ; glutamate/aspartate transport system permease protein
D YE2994 gltL; putative glutamate/aspartate transport ATP-binding protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D YE3833 Putative ABC transporter periplasmic solute binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein
D YE3834 Putative ABC transporter permease K09970 aapQ; general L-amino acid transport system permease protein
D YE3835 Putative ABC transporter permease protein K09971 aapM; general L-amino acid transport system permease protein
D YE3836 Putative ATP-binding component of an ABC transporter K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D YE2516 fliY; putative cystine-binding periplasmic protein K02424 tcyA; L-cystine transport system substrate-binding protein
D YE2515 yecS; putative amino-acid ABC transporter (permease) K10009 tcyB; L-cystine transport system permease protein
D YE2514 yecC; putative amino-acid ABC transporter (ATP-binding protein) K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D YE0230 livK; branched-chain amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D YE0231 livH; high-affinity branched-chain amino acid transport system, permease protein K01997 livH; branched-chain amino acid transport system permease protein
D YE0232 livM; high-affinity branched-chain amino acid transport system, permease protein K01998 livM; branched-chain amino acid transport system permease protein
D YE0233 livG; high-affinity branched-chain amino acid transport, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D YE0234 livF; high-affinity branched-chain amino acid transport, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D YE1466 putative exported protein K02073 metQ; D-methionine transport system substrate-binding protein
D YE3255 putative lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D YE4180 Possible component of an ABC transporter system K02073 metQ; D-methionine transport system substrate-binding protein
D YE1468 putative ABC transport integral membrane subunit K02072 metI; D-methionine transport system permease protein
D YE3254 ABC transporter permease protein K02072 metI; D-methionine transport system permease protein
D YE4182 Putative ABC transport permease component K02072 metI; D-methionine transport system permease protein
D YE3253 abc; ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D YE4181 Putative ABC transport family protein K02071 metN; D-methionine transport system ATP-binding protein
D YE1467 putative ABC transport ATP-binding subunit K02071 metN; D-methionine transport system ATP-binding protein
D YE2873 putative substrate-binding periplasmic transport protein K11959 urtA; urea transport system substrate-binding protein
D YE2872 putative Branched-chain amino acid transport system, permease component K11960 urtB; urea transport system permease protein
D YE2871 putative Branched-chain amino acid transport system, permease component K11961 urtC; urea transport system permease protein
D YE2870 putative ABC transport ATP-binding subunit K11962 urtD; urea transport system ATP-binding protein
D YE2869 putative ABC transport ATP-binding subunit K11963 urtE; urea transport system ATP-binding protein
D YE2903 putative amino acid transporter K11963 urtE; urea transport system ATP-binding protein
D YE4193 putative periplasmic solute-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D YE0801 ABC transporter, solute-binding component K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D YE4190 putative amino acid transport system permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D YE4191 ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D YE0802 ABC transporter, inner-membrane component K02029 ABC.PA.P; polar amino acid transport system permease protein
D YE0803 ABC transporter, inner-membrane component K02029 ABC.PA.P; polar amino acid transport system permease protein
D YE0804 ABC transporter, ATP-binding component K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D YE2233 oppA; periplasmic oligopeptide-binding protein precursor K15580 oppA; oligopeptide transport system substrate-binding protein
D YE2110 mppA; putative periplasmic murein peptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D YE2234 oppA2; periplasmic oligopeptide-binding protein precursor K15580 oppA; oligopeptide transport system substrate-binding protein
D YE2232 oppB; oligopeptide transport system permease protein K15581 oppB; oligopeptide transport system permease protein
D YE2231 oppC; oligopeptide transport system permease protein K15582 oppC; oligopeptide transport system permease protein
D YE2230 oppD; oligopeptide transport ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D YE2229 oppF; oligopeptide transport ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D YE4083 dppA; periplasmic dipeptide transport protein K12368 dppA; dipeptide transport system substrate-binding protein
D YE4082 dppB; dipeptide transport system permease protein K12369 dppB; dipeptide transport system permease protein
D YE4081 dppC; dipeptide transport system permease protein K12370 dppC; dipeptide transport system permease protein
D YE4080 dppD; dipeptide transport ATP-binding protein K12371 dppD; dipeptide transport system ATP-binding protein
D YE4079 dppF; dipeptide transport ATP-binding protein K12372 dppF; dipeptide transport system ATP-binding protein
D YE2125 sapA; peptide transport periplasmic protein precursor K19226 sapA; cationic peptide transport system substrate-binding protein
D YE2126 sapB; peptide transport system permease protein K19227 sapB; cationic peptide transport system permease protein
D YE2127 sapC; peptide transport system permease protein K19228 sapC; cationic peptide transport system permease protein
D YE2128 sapD; peptide transport system ATP-binding protein K19229 sapD; cationic peptide transport system ATP-binding protein
D YE2129 sapF; peptide transport system ATP-binding protein K19230 sapF; cationic peptide transport system ATP-binding protein
D YE0491 ABC transporter, substrate binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D YE0946 putative solute-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D YE0490 putative transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D YE0947 putative membrane protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D YE0489 putative transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D YE0948 binding-protein-dependent transport protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D YE0488 putative ABC transporter transporter,ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D YE0949 putative transport ATPase K02031 ddpD; peptide/nickel transport system ATP-binding protein
D YE0487 putative ABC transporter, ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D YE0950 putative transport ATPase K02032 ddpF; peptide/nickel transport system ATP-binding protein
D YE1430 putative substrate-binding transport protein K13893 yejA; microcin C transport system substrate-binding protein
D YE1429 putative ABC transporter integral membrane subunit K13894 yejB; microcin C transport system permease protein
D YE1428 putative ABC transporter integral membrane subunit K13895 yejE; microcin C transport system permease protein
D YE1427 putative ABC transporter ATP-binding subunit K13896 yejF; microcin C transport system ATP-binding protein
D YE0731 fhuD; ferrichrome-binding periplasmic protein precursor K23227 fhuD; ferric hydroxamate transport system substrate-binding protein
D YE0732 fhuB; ferrichrome transport system permease protein FhuB K23228 fhuB; ferric hydroxamate transport system permease protein
D YE0730 fhuC; ferrichrome transport ATP-binding protein FhuC K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16]
D YE0329 hemT; hemin-binding periplasmic protein K25132 hmuT; heme transport system substrate-binding protein
D YE2182 hmuT2; hemin-binding periplasmic protein K25132 hmuT; heme transport system substrate-binding protein
D YE0328 hemU; hemin transport system permease protein HmuU K25133 hmuU; heme transport system permease protein
D YE0327 hemV; hemin transport system ATP-binding protein K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5]
D YE3618 fepB; Ferrienterobactin-periplasmic binding protein K23185 fepB; ferric enterobactin transport system substrate-binding protein
D YE3619 fepD; ferric enterobactin transport system permease protein K23186 fepD; iron-siderophore transport system permease protein
D YE3620 fepG; iron-siderophore transport system, membrane permease component K23187 fepG; iron-siderophore transport system permease protein
D YE3621 fepC; iron-siderophore transport system, ATP-binding component K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D YE3586 putative iron transport protein K25282 yclQ; iron-siderophore transport system substrate-binding protein
D YE3584 putative iron transport permease K25283 yclO; iron-siderophore transport system permease protein
D YE3585 putative iron transport permease K25284 yclN; iron-siderophore transport system permease protein
D YE3583 putative iron ABC transporter, ATP-binding protein K25285 yclP; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-]
D YE3190 conserved hypothetical protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D YE0555 putative iron transporter K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D YE1459 putative FecCD-family membrane transport protein K02015 ABC.FEV.P; iron complex transport system permease protein
D YE1460 putative siderophore ABC transporter,ATP-binding subunit K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D YE0738 yadT; putative priplasmic metal binding protein K06858 btuF; vitamin B12 transport system substrate-binding protein
D YE2195 btuC; putative vitamin B12 transport system permease protein K06073 btuC; vitamin B12 transport system permease protein
D YE2193 btuD; putative vitamin B12 transport ATP-binding protein K06074 btuD; vitamin B12 transport system ATP-binding protein [EC:7.6.2.8]
D YE2388 znuA; exported high-affinity zinc uptake system protein K09815 znuA; zinc transport system substrate-binding protein
D YE2390 znuB; high-affinity zinc uptake system membrane protein K09816 znuB; zinc transport system permease protein
D YE2389 znuC; high-affinity zinc uptake system ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D YE1900 periplasmic-binding protein K11604 sitA; manganese/iron transport system substrate-binding protein
D YE1898 chelated iron transport system membrane protein K11605 sitC; manganese/iron transport system permease protein
D YE1897 chelated iron transport system membrane protein K11606 sitD; manganese/iron transport system permease protein
D YE1899 ATP-binding transport protein K11607 sitB; manganese/iron transport system ATP-binding protein
D YE2714A cbiN; cobalt transport protein cbiN K02009 cbiN; cobalt/nickel transport protein
D YE2713 cbiQ; putative cobalt transport protein K02008 cbiQ; cobalt/nickel transport system permease protein
D YE2714 cbiM; putative membrane protein K02007 cbiM; cobalt/nickel transport system permease protein
D YE2712 cbiO; putative cobalt transport ATP-binding protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D YE3109 periplasmic solute binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein
D YE3110 putative ABC-transporter membrane protein K02075 ABC.ZM.P; zinc/manganese transport system permease protein
D YE3111 ABC transport system ATP-binding protein K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein
D YE0501 putative membrane protein K07091 lptF; lipopolysaccharide export system permease protein
D YE0502 putative membrane protein K11720 lptG; lipopolysaccharide export system permease protein
D YE3758 yhbG; probable ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D YE2894 putative membrane protein K25180 ybhR; drug efflux transport system permease protein
D YE2893 putative membrane protein K25181 ybhS; drug efflux transport system permease protein
D YE2892 putative ABC transporter ATP-binding protein K25182 ybhF; drug efflux transport system ATP-binding protein
D YE2891 HlyD family secretion protein K25183 ybhG; membrane fusion protein YbhG
D YE1710 lolC; lipoprotein releasing system, transmembrane protein K09808 lolC_E; lipoprotein-releasing system permease protein
D YE1712 lolE; lipoprotein releasing system, transmembrane protein K09808 lolC_E; lipoprotein-releasing system permease protein
D YE1711 lolD; lipoprotein releasing system, ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D YE1266 ccmD; putative heme exporter protein D K02196 ccmD; heme exporter protein D
D YE1265 ccmC; putative heme exporter protein C K02195 ccmC; heme exporter protein C
D YE1264 ccmB; heme exporter protein B K02194 ccmB; heme exporter protein B
D YE1263 ccmA; putative heme exporter protein A K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D YE0227 ftsX; cell division protein K09811 ftsX; cell division transport system permease protein
D YE0226 ftsE; cell division ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein
D YE0716 yadH; putative ABC transporter, integral membrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D YE0715 yadG; putative ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D YE2493 putative membrane protein K02004 ABC.CD.P; putative ABC transport system permease protein
D YE2494 putative membrane protein K02004 ABC.CD.P; putative ABC transport system permease protein
D YE2823 putative membrane protein K02004 ABC.CD.P; putative ABC transport system permease protein
D YE3053 ybbP; putative permease K02004 ABC.CD.P; putative ABC transport system permease protein
D YE2492 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D YE2825 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D YE3054 ybbA; putative ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D YE2170 putative ATP-dependent transporter K09013 sufC; Fe-S cluster assembly ATP-binding protein
D YE2008 putative membrane protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D YE2163 putative transport protein K26939 norM; MATE family, multidrug efflux pump
D YE2679 putative sugar transporter K26937 dinF; MATE family, multidrug efflux pump
D YE2066 fucP; L-fucose permease K02429 fucP; MFS transporter, FHS family, L-fucose permease
D YE0648 setA; sugar efflux transporter K03291 MFS.SET; MFS transporter, SET family, sugar efflux transporter
D YE3594 proP; proline/betaine transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D YE0606 putative transport protein K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D YE3588 putative transporter protein K08173 ydfJ; MFS transporter, MHS family, metabolite:H+ symporter
D YE1226 putative membrane transport protein K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter
D YE1193 nanT; putative sugar transporter K03290 nanT; MFS transporter, SHS family, sialic acid transporter
D YE3709 exuT; ExuT transport protein K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter
D YE3358 putative sugar transporter K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter
D YE1049 hcaT; putative transport permease protein K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter
D YE0210 glpT; glycerol-3-phosphate transporter K02445 glpT; MFS transporter, OPA family, glycerol-3-phosphate transporter
D YE2055 putative inner-membrane regulatory protein K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D YE4087 uhpC; putative regulatory protein K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D YE2658 putative transporter protein K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D YE0733 nark; nitrite extrusion protein K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D YE3326 ygeD; putative membrane protein K08227 lplT; MFS transporter, LPLT family, lysophospholipid transporter
D YE3139 ampG; Beta-lactamase induction signal transducer AmpG K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D YE1425 bcr; probable drug resistance translocator protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D YE2279 putative multidrug resistance protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D YE0097 emrD; multidrug resistance protein D K08154 emrD; MFS transporter, DHA1 family, 2-module integral membrane pump EmrD
D YE4127 mdfA; multidrug translocase K08160 mdfA; MFS transporter, DHA1 family, multidrug/chloramphenicol efflux transport protein
D YE1610 putative MFS-family transport protein K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein
D YE2418 putative membrane protein K08162 mdtH; MFS transporter, DHA1 family, multidrug resistance protein
D YE2475 putative membrane transport protein K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D YE3334 putative sugar transport protein K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D YE3243 emrB; multidrug resistance protein B K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D YE1246 MFS-family membrane transport protein K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D YE1875 putative transport protein K08169 yebQ; MFS transporter, DHA2 family, multidrug resistance protein
D YE1106 yegB; putative membrane protein K18326 mdtD; MFS transporter, DHA2 family, multidrug resistance protein
D YE3067 rosA; putative membrane efflux protein K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein
D YE2021 putative membrane protein K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein
D YE1530 putative membrane protein K08219 UMF2; MFS transporter, UMF2 family, putative MFS family transporter protein
D YE2613 ybtX; putative signal transducer K05373 ybtX; MFS transporter, putative signal transducer
D YE3963 conserved integral membrane protein K06141 tsgA; MFS transporter, TsgA protein
D YE1206 ptsI; PTS sytem, enzyme I component K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D YE3319 ptsP; phosphoenolpyruvate-protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D YE1207 ptsH; PTS system, phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D YE3763 ptsO; putative phosphocarrier protein K08485 ptsO; phosphocarrier protein NPr
D YE1447 fruB; fructose-specific pts system component IIa K11183 fruB; multiphosphoryl transfer protein [EC:2.7.1.202]
D YE1205 crr; PTS system, glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D YE1643 ptsG; PTS system, glucose-specific IIBC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D YE2978 nagE; pts system, N-acetylglucosamine-specific IIABC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D YE2011 malX; PTS system, maltose and glucose-specific IIabc component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D YE0552 scrA; PTSsystem, sucrose-specific IIbc component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D YE1416 Putative PTS-system permease K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D YE2104 arbF; PTS system beta-glucoside-specific IIabc component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D YE1256 ascF; PTS transport protein K02753 ascF; beta-glucoside (arbutin/salicin/cellobiose) PTS system EIICB component [EC:2.7.1.-]
D YE3774 treB; PTS system, trehalose-specific IIBC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D YE3690 photransferase system, IIBC component K11192 murP; N-acetylmuramic acid PTS system EIICB component [EC:2.7.1.192]
D YE3199 aglA; PTS system, alpha-glucoside-specific IIBC component K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-]
D YE1449 fruA; PTS system, fructose-specific IIBC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D YE4148 mtlA; PTS system, mannitol-specific IIABC component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D YE0970 celC; PTS system, cellobiose-specific IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D YE1291 putative PTS system protein K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D YE4105 Putative phosphotransferase protein K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D YE4103 pts system, cellobiose-specific IIb component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D YE0967 celA; PTS system, cellobiose-specific IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D YE1294 putative exported PTS system protein K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D YE4104 Putative phosphotransferase protein K02761 celB; cellobiose PTS system EIIC component
D YE0968 celB; PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D YE1293 putative PTS system protein K02761 celB; cellobiose PTS system EIIC component
D YE4102 Putative cellobiose-specific phosphotransferase K02761 celB; cellobiose PTS system EIIC component
D YE1096 gutB; pts system, glucitol/sorbitol-specific iia component K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D YE1097 gutE; pts system, glucitol/sorbitol-specific iibc component K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D YE1098 gutA; pts system, glucitol/sorbitol-specific iic2 component K02783 srlA; glucitol/sorbitol PTS system EIIC component
D YE1777 manX; PTS system, mannose-specific IIAB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D YE1776 manY; PTS system, mannose-specific IIC component K02795 manY; mannose PTS system EIIC component
D YE1775 manZ; PTS system, mannose-specific IID component K02796 manZ; mannose PTS system EIID component
D YE0814 sorF; sorbose-specific PTS uptake system component K02812 sorF; sorbose PTS system EIIA component [EC:2.7.1.206]
D YE0813 sorB; sorbose-specific PTS uptake system component K02813 sorB; sorbose PTS system EIIB component [EC:2.7.1.206]
D YE0812 sorA; sorbose-specific PTS uptake system component K02814 sorA; sorbose PTS system EIIC component
D YE0811 sorM; sorbose-specific PTS uptake system, component K02815 sorM; sorbose PTS system EIID component
D YE1330 phosphotransferase enzyme II, A component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D YE1329 phosphotransferase enzyme II, B component K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D YE1328 putative membrane protein K03475 ulaA; ascorbate PTS system EIIC component
D YE3761 ptsN; nitrogen regulatory IIA protein K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D YE0542 multifunctional PTS-system sugar transferase K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]
D YE2854 aqpZ; aquaporin Z K06188 aqpZ; aquaporin Z
D YE0100 glpF; glycerol uptake facilitator protein K02440 glpF; glycerol uptake facilitator
D YE2727 pduF; propanediol diffusion facilitator K27261 pduF; propanediol uptake facilitator
D YE0961 putative potassium channel protein K10716 kch; voltage-gated potassium channel
D YE3119 amtB; probable ammonium transporter K03320 amt; ammonium transporter, Amt family
D YE3841 Putative glutathione S transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D YE2137 gst; glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D YE1848 putative transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D YE1463 putative glutathione S-transferase-family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D YE3739 sspA; putative stringent starvation protein A K03599 sspA; stringent starvation protein A
D YE1533 focA; putative formate transporter 1 K06212 focA; formate transporter
D YE2812 focB; putative formate transporter K06212 focA; formate transporter
D YE3967 nirC; putative nitrite transporter K02598 nirC; nitrite transporter
D YE3893 mscL; mechanosensitive ion channel K03282 mscL; large conductance mechanosensitive channel
D YE3097 kefA; putative potassium efflux system K05802 mscK; potassium-dependent mechanosensitive channel
D YE0322 putative inner-membrane transport protein K05802 mscK; potassium-dependent mechanosensitive channel
D YE0366 putative membrane transport protein K22051 mscM; miniconductance mechanosensitive channel
D YE3406 putative membrane protein K03442 mscS; small conductance mechanosensitive channel
D YE1847 putative inner membrane protein K16052 ynaI; MscS family membrane protein
D YE1117 mgtE; putative divalent cation transport protein K06213 mgtE; magnesium transporter
D YE0958 putative urea transporter K08717 utp; urea transporter
D YE2579 motA; chemotaxis MotA protein K02556 motA; chemotaxis protein MotA
D YE2578 motB; chemotaxis MotB protein K02557 motB; chemotaxis protein MotB
D YE3646 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D YE3645 ExbD/TolR-family transport protein K03559 exbD; biopolymer transport protein ExbD
D YE2935 tolQ; TolQ colicin import protein K03562 tolQ; biopolymer transport protein TolQ
D YE2934 tolR; TolR colicin import membrane protein K03560 tolR; biopolymer transport protein TolR
D YE0200 corA; magnesium and cobalt transport protein K03284 corA; magnesium transporter
D YE2107 CorA-like Mg2+ transporter protein K16074 zntB; zinc transporter
D YE0963 putative membrane protein K06199 crcB; fluoride exporter
D YE3011 crcB; putative membrane protein K06199 crcB; fluoride exporter
D YE0964 putative membrane protein K06199 crcB; fluoride exporter
D YE0403 putative membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D YE0840 yfjD; putative membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D YE1563 ompF; putative outer membrane porin F protein K09476 ompF; outer membrane pore protein F
D YE2856 ompC2; outer membrane protein C2 K11929 phoE; outer membrane pore protein E
D YE1401 meoA; outer membrane protein C, porin K09475 ompC; outer membrane pore protein C
D YE1290 putative exported protein K02024 lamB; maltoporin
D YE3862 lamB; maltoporin K02024 lamB; maltoporin
D YE0553 scrY; sucrose porin K16077 scrY; sucrose porin
D YE4101 Putative outer membrane porin K16077 scrY; sucrose porin
D YE1581 ompA; putative outer membrane porin A protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D YE2835 ompX; outer membrane protein K11934 ompX; outer membrane protein X
D YE1820 ail; attachment invasion locus protein K16078 ail; attachment invasion locus protein
D YE1274 fadL; putative long-chain fatty acid transport protein K06076 fadL; long-chain fatty acid transport protein
D YE0159 putative outer membrane usher protein K07347 fimD; outer membrane usher protein
D YE1857 probable outer membrane usher protein K07347 fimD; outer membrane usher protein
D YE1112 outer membrane usher protein K07347 fimD; outer membrane usher protein
D YE1454 myfC; outer membrane usher protein K07347 fimD; outer membrane usher protein
D YE2693 outer membrane usher protein K07347 fimD; outer membrane usher protein
D YE2666 probable fimbrial usher protein K07347 fimD; outer membrane usher protein
D YE0704 putative siderophore K19611 fepA; ferric enterobactin receptor
D YE0556 putative iron transporter K16091 fecA; Fe(3+) dicitrate transport protein
D YE0139 btuB; exported vitamin B12 receptor protein K16092 btuB; vitamin B12 transporter
D YE0123 hemophore HasA K12545 hasA; heme acquisition protein HasA
D YE0124 probable hemophore K12545 hasA; heme acquisition protein HasA
D YE0125 probable hemophore K12545 hasA; heme acquisition protein HasA
D YE0126 probable hemophore K12545 hasA; heme acquisition protein HasA
D YE2622 fyuA; pesticin/yersiniabactin receptor protein K15721 fyuA; pesticin/yersiniabactin receptor
D YE1461 putative outer membrane protein K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D YE2180 hemR2; hemin storage receptor protein K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D YE0331 hemR; hemin receptor precursor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D YE1771 fcuA; ferrichrome receptor protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D YE3189 putative hydroxamate-type ferrisiderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D YE0323 foxA; ferrioxamine receptor precursor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D YE3665 hasF; ABC-transporter outer membrane component K12340 tolC; outer membrane protein
D YE0445 ibeB; probable outer membrane efflux lipoprotein K18139 oprM; outer membrane protein, multidrug efflux system
D YE3276 putative surface antigen K07277 SAM50; outer membrane protein insertion porin family
D YE1076 yfgL; putative lipoprotein K17713 bamB; outer membrane protein assembly factor BamB
D YE1138 dapX; lipoprotein K07287 bamC; outer membrane protein assembly factor BamC
D YE0890 yfiO; putative lipoprotein K05807 bamD; outer membrane protein assembly factor BamD
D YE0997 conserved hypothetical protein K06186 bamE; outer membrane protein assembly factor BamE
D YE0405 putative exported protein K07278 tamA; translocation and assembly module TamA
D YE0406 putative exported protein K09800 tamB; translocation and assembly module TamB
D YE4070 putative exported protein K22110 kdgM; oligogalacturonate-specific porin family protein
D YE1881 putative exported protein K22110 kdgM; oligogalacturonate-specific porin family protein
D YE3757 conserved hypothetical protein K09774 lptA; lipopolysaccharide export system protein LptA
D YE3756 yrbK; putative exported protein K11719 lptC; lipopolysaccharide export system protein LptC
D YE0633 imp; organic solvent tolerance protein precursor K04744 lptD; LPS-assembly protein
D YE2997 rlpB; rare lipoprotein B precursor K03643 lptE; LPS-assembly lipoprotein
D YE4072 bcsC; Probable BcsC protein involved in cellulose synthesis K20543 bcsC; cellulose synthase operon protein C
D YEP0013 yopB; virulence plasmid YopB transmembrane effector protein K23475 yopB; transloator
D YEP0012 yopD; translocator protein K23476 yopD; transloator
D YE3537 yspB; putative type III secretion system effector protein K13285 sipB; invasin B
D YE3535 yspD; hypothetical protein K13287 sipD; invasin D
D YE2124 ytxA; putative enterotoxin subunit K11023 ptxA; pertussis toxin subunit 1 [EC:2.4.2.-]
D YE1123A putative exported protein K19298 subB; subtilase cytotoxin, subunit B
D YE2988 ybeX; putative membrane protein K06189 corC; hemolysin (HlyC) family protein
D YE2790 yohJ; putative membrane protein K06518 cidA; holin-like protein
D YE2728 pduA; putative propanediol utilization protein K27260 pduA; bacterial microcompartment shell protein
D YE1403 putative transport protein K16210 togT; oligogalacturonide transporter
D YE1458 lysP; putative lysine-specific permease K11733 lysP; lysine-specific permease
D YE0695 aroP; aromatic amino acid transport protein K11734 aroP; aromatic amino acid transport protein AroP
D YE1761 aroP; aromatic amino acid transport protein K11734 aroP; aromatic amino acid transport protein AroP
D YE3178 proY; probable proline-specific permease K11736 proY; proline-specific permease ProY
D YE1952 cycA; D-serine/D-alanine/glycine transporter K11737 cycA; D-serine/D-alanine/glycine transporter
D YE2508 ansP; L-asparagine permease K11738 ansP; L-asparagine permease
D YE4093 amino acid permease K16234 hutT; histidine transporter
D YE3526 potE2; putrescine-ornithine antiporter K03756 potE; putrescine:ornithine antiporter
D YE0454 putative amino acid permease K03756 potE; putrescine:ornithine antiporter
D YE0534 arcD; arginine/ornithine antiporter K03758 arcD; arginine:ornithine antiporter / lysine permease
D YE2081 putative amino acid antiporter K03758 arcD; arginine:ornithine antiporter / lysine permease
D YE1750 probable amino acid permease K03758 arcD; arginine:ornithine antiporter / lysine permease
D YE3692 putative amino acid permease K20265 gadC; glutamate:GABA antiporter
D YE3672 asoB; putative permease K16263 yjeH; amino acid efflux transporter
D YE2926 putative cation transport protein K16264 czcD; cobalt-zinc-cadmium efflux system protein
D YE0088 putative integral membrane protein K13283 fieF; ferrous-iron efflux pump FieF
D YE3630 putative cation efflux system protein K07787 cusA; copper/silver efflux system protein
D YE3101 acrB; multidrug efflux protein K18138 acrB; multidrug efflux pump
D YE0444 multidrug efflux protein K18138 acrB; multidrug efflux pump
D YE3595 putative integral membrane efflux protein K18138 acrB; multidrug efflux pump
D YE1151 multidrug efflux protein K18324 acrD; multidrug efflux pump
D YE1108 yegN; AcrB/AcrD/AcrF family membrane protein K07788 mdtB; multidrug efflux pump
D YE1107 yegO; AcrB/AcrD/AcrF family membrane protein K07789 mdtC; multidrug efflux pump
D YE2101 qacE; quaternary ammonium compound-resistance protein K03297 emrE; small multidrug resistance pump
D YE0359 sugE; putative chaperone K11741 sugE; quaternary ammonium compound-resistance protein SugE
D YE2380 putative integral membrane protein K11742 mdtI; spermidine export protein MdtI
D YE2381 putative inner membrane protein K11743 mdtJ; spermidine export protein MdtJ
D YE2965 putative membrane protein K08978 TC.BAT1; bacterial/archaeal transporter family protein
D YE3697 putative membrane protein K15268 eamA; O-acetylserine/cysteine efflux transporter
D YE2837 putative membrane protein K11939 rhtA; inner membrane transporter RhtA
D YE0201 rarD; putative membrane protein K05786 rarD; chloramphenicol-sensitive protein RarD
D YE2187 putative membrane protein K12962 arnE; undecaprenyl phosphate-alpha-L-ara4N flippase subunit ArnE
D YE2027 putative exported protein K09771 TC.SMR3; small multidrug resistance family-3 protein
D YE1023 gntP; putative gluconate transporter K16321 gntP; high-affinity gluconate transporter
D YE4021 gntT; putative gluconate permease K06155 gntT; Gnt-I system high-affinity gluconate transporter
D YE0350 dcuA; anaerobic C4-dicarboxylate transporter K07791 dcuA; anaerobic C4-dicarboxylate transporter DcuA
D YE0848 putative anaerobic C4-dicarboxylate transporter K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D YE2477 chaA; calcium/proton antiporter K07300 chaA; Ca2+:H+ antiporter
D YE3753 yrbG; putative sodium/calcium exchanger protein K07301 yrbG; cation:H+ antiporter
D YE4048 phosphate transport protein K16322 pit; low-affinity inorganic phosphate transporter
D YE3814 panF; sodium/pantothenate symporter K14392 panF; sodium/pantothenate symporter
D YE1934 putP; proline permease K11928 putP; sodium/proline symporter
D YE0307 putative transmembrane transport protein K14393 actP; cation/acetate symporter
D YE0310 gltP; proton glutamate symport protein K11102 gltP; proton glutamate symport protein
D YE4067 dctA; C4-dicarboxylate transport protein K11103 dctA; aerobic C4-dicarboxylate transport protein
D YE3704 putative symporter protein K07862 sstT; serine/threonine transporter
D YE0042 gltS; sodium/glutamate symport carrier protein K03312 gltS; glutamate:Na+ symporter, ESS family
D YE0611 nhaA; sodium-proton antiporter K03313 nhaA; Na+:H+ antiporter, NhaA family
D YE2284 nhaB; Na+/H+ antiporter K03314 nhaB; Na+:H+ antiporter, NhaB family
D YE3839 putative putative Na(+)/H(+) exchanger protein K24163 nhaK; monovalent cation/hydrogen antiporter
D YE1602 putative Na+ antiporter K11105 cvrA; potassium/hydrogen antiporter
D YE3940 kefB; probable potassium-efflux system protein K11747 kefB; glutathione-regulated potassium-efflux system protein KefB
D YE3941 conserved hypothetical protein K11748 kefG; glutathione-regulated potassium-efflux system ancillary protein KefG
D YE3068 rosB; putative potassium antiporter K26735 KEA4_5_6; K+:H+ antiporter
D YE0272 trkH; Trk system potassium uptake protein TrkH K03498 trkH; trk/ktr system potassium uptake protein
D YE3892 trkA; trk system potassium uptake protein K03499 trkA; trk/ktr system potassium uptake protein
D YE0515 putative permease K10974 codB; cytosine permease
D YE1957 putative purine and pyrimidine permease K10974 codB; cytosine permease
D YE0518 putative permease K10974 codB; cytosine permease
D YE1129 uraA; sugar uptake permease K02824 uraA; uracil permease
D YE1944 putative membrane permease K09016 rutG; putative pyrimidine permease RutG
D YE0041 putative membrane permease K16345 xanP; xanthine permease XanP
D YE3840 putative xanthine/uracil permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D YE4188 yieG; Xanthine/uracil permeases family protein K06901 pbuG; adenine/guanine/hypoxanthine permease
D YE1217 nupC; nucleoside permease K11535 nupC; nucleoside transport protein
D YE1382 tyrP; tyrosine-specific transport protein K03834 tyrP; tyrosine-specific transport protein
D YE0649 mtr; tryptophan-specific transport protein K03835 mtr; tryptophan-specific transport protein
D YE1442 mtr; putative tryptophan-specific transport protein K03835 mtr; tryptophan-specific transport protein
D YE1473 sdaC; serine transporter K03837 sdaC; serine transporter
D YE0337 tdcC; threonine/serine transporter K03838 tdcC; threonine transporter
D YE0447 putative transmembrane transport protein K26604 cyuP; cysteine uptake transport protein
D YE1971 probable membrane transport protein K05782 benE; benzoate membrane transport protein
D YE2647 citT; citrate carrier K09477 citT; citrate:succinate antiporter
D YE0735 yadQ; putative chloride channel protein K03281 clcA; chloride channel protein, CIC family
D YE2025 putative membrane protein K03281 clcA; chloride channel protein, CIC family
D YE0959 putative nickel transport protein K07241 hoxN; nickel/cobalt transporter (NiCoT) family protein
D YE2426 conserved hypothetical protein K03321 TC.SULP; sulfate permease, SulP family
D YE0973 putative membrane transport protein K03321 TC.SULP; sulfate permease, SulP family
D YE1219 mntH; manganese transport protein MntH K03322 mntH; manganese transport protein
D YE3591 putative Na+/Pi-cotransporter K03324 yjbB; phosphate:Na+ symporter
D YE3473 arsA2; arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D YE3365 arsB; arsenical pump membrane protein K03893 arsB; arsenical pump membrane protein
D YE3474 arsB2; arsenical pump membrane protein K03893 arsB; arsenical pump membrane protein
D YE2780 dcuC; anaerobic C4-dicarboxylate transporter K03326 TC.DCUC; C4-dicarboxylate transporter, DcuC family
D YE0177 wzxE; putative lipopolysaccharide biosynthesis protein K16693 wzxE; enterobacterial common antigen flippase
D YE2409 mviN; putative membrane protein K03980 murJ; putative peptidoglycan lipid II flippase
D YE0246 putative membrane protein K13936 mdcF; malonate transporter and related proteins
D YE1078 putative membrane protein K13936 mdcF; malonate transporter and related proteins
D YE0007 kup; potassium transport protein K03549 kup; KUP system potassium uptake protein
D YE3405 yggA; putative LysE type translocator K06895 lysE; L-lysine exporter family protein LysE/ArgO
D YE0206 rhtB; putative homoserine/homoserine lactone efflux protein K05834 rhtB; homoserine/homoserine lactone efflux protein
D YE0205 rhtC; threonine efflux protein K05835 rhtC; threonine efflux protein
D YE0623 putative LysE type translocator K05835 rhtC; threonine efflux protein
D YE1238 yfuD; putative membrane transport protein K03329 yahN; amino acid exporter
D YE3238 putative amino acid transporter K26605 azlC; branched chain amino acid efflux pump
D YE3239 putative membrane protein K26606 azlD; branched chain amino acid efflux pump
D YE3794 yhcP; putative membrane protein K03468 aaeB; p-hydroxybenzoic acid efflux pump subunit AaeB
D YE3529 putative membrane protein K15547 mdtO; multidrug resistance protein MdtO
D YE1133 perM; putative membrane protein K03548 perM; putative permease
D YE0216 yhhQ; putative membrane protein K09125 yhhQ; queuosine precursor transporter
D YE1902 marC; multiple antibiotic resistance protein K05595 marC; multiple antibiotic resistance protein
D YE0671 ftsW; cell division protein FtsW K03588 ftsW; cell division protein FtsW
D YE1772 yebN; putative membrane protein K23242 mntP; manganese efflux pump family protein
D YE1938 putative membrane protein K07243 FTR; high-affinity iron transporter
D YE2497 putative membrane protein K07243 FTR; high-affinity iron transporter
D YE1939 putative exported protein K07224 efeO; iron uptake system component EfeO
D YE1940 conserved hypothetical protein K16301 efeB; deferrochelatase/peroxidase EfeB [EC:1.11.1.-]
D YE2496 putative exported protein K07230 p19; periplasmic iron binding protein
D YE1052 putative membrane protein K08970 rcnA; nickel/cobalt transporter (NicO) family protein
D YE0315 putative membrane protein K03832 tonB; periplasmic protein TonB
D YE2222 tonB; TonB protein K03832 tonB; periplasmic protein TonB
D YE0129 putative membrane protein K03832 tonB; periplasmic protein TonB
D YE2308 TonB-related phage protein K03832 tonB; periplasmic protein TonB
D YE2931 pal; peptidoglycan-associated lipoprotein Pal K03640 pal; peptidoglycan-associated lipoprotein
D YE2933 tolA; TolA colicin import membrane protein K03646 tolA; colicin import membrane protein
D YE2932 tolB; TolB colicin import protein K03641 tolB; TolB protein
D YE1300 scsB; putative metal resistance protein K08344 scsB; suppressor for copper-sensitivity B
D YE1445 torC; cytochrome C-type protein K03532 torC; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorC
D YE1444 torA; putative molybdopterin-containing oxidoreductase K07812 torZ; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3]
D YE3330 bisC; putative biotin sulfoxide reductas2 K08351 bisC; biotin/methionine sulfoxide reductase [EC:1.-.-.-]
D YE1617 ttrA; tetrathionate reductase subunit A K08357 ttrA; tetrathionate reductase subunit A
D YE1615 ttrB; tetrathionate reductase subunit B K08358 ttrB; tetrathionate reductase subunit B
D YE1616 ttrC; tetrathionate reductase subunit C K08359 ttrC; tetrathionate reductase subunit C
D YE3242 emrA; multidrug resistance protein A K03543 emrA; membrane fusion protein, multidrug efflux system
D YE3530 putative HlyD family secretion protein K15549 mdtN; membrane fusion protein, multidrug efflux system
D YE0128 HlyD family secretion protein K12537 hasE; membrane fusion protein, type I secretion system
D YE3629 putative efflux system protein K07798 cusB; membrane fusion protein, copper/silver efflux system
D YE1999 hemolysin transport protein K12532 rtxD; membrane fusion protein, RTX toxin transport system
D YE1697 putative exported protein K13408 cvaA; membrane fusion protein
D YE0443 multidrug efflux protein K03585 acrA; membrane fusion protein, multidrug efflux system
D YE3100 acrA; multidrug efflux protein K03585 acrA; membrane fusion protein, multidrug efflux system
D YE2913A putative membrane protein K25859 acrZ; accessory protein, multidrug efflux pump
D YE1109 yegM; putitive HlyD family secretion protein K07799 mdtA; membrane fusion protein, multidrug efflux system
D YE0792 putative type I secretion protein K13888 macA; membrane fusion protein, macrolide-specific efflux system
D YE1514 putative HlyD family secretion protein K13888 macA; membrane fusion protein, macrolide-specific efflux system
D YE1200 putative HlyD family secretion protein K13888 macA; membrane fusion protein, macrolide-specific efflux system
D YE3795 yhcQ; putative HlyD family secretion protein K15548 aaeA; p-hydroxybenzoic acid efflux pump subunit AaeA
D YE2927 pnuC; intergral membrane NMN transport protein PnuC K03811 pnuC; nicotinamide mononucleotide transporter
D YE3999 feoA; hypothetical ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D YE3998 feoB; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D YE3997 conserved hypothetical protein K07490 feoC; ferrous iron transport protein C
D YE4049 uspB; universal stress protein B K06144 uspB; universal stress protein B
D YE0358 ecnB; entericidin B precursor K16348 ecnB; entericidin B
D YE1268 ccmF; putative cytochrome c-type biogenesis protein K02198 ccmF; cytochrome c-type biogenesis protein CcmF
D YE2100 putative membrane protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D YE2586 mgtC; Mg(2+) transport ATPase protein C K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D YE1797 putative copper resistance protein D K07245 pcoD; copper resistance protein D
D YE1796 putative copper resistance protein K07156 copC; copper resistance protein C
D YE2271 putative exported protein K07274 mipA; MipA family protein
C 02044 Secretion system [BR:yen02044]
D YE3665 hasF; ABC-transporter outer membrane component K12340 tolC; outer membrane protein
D YE1998 putative RTX-family toxin transporter K12530 rtxB; ATP-binding cassette, subfamily B, bacterial RtxB
D YE2000 putative toxin transport protein K12531 rtxE; ATP-binding cassette, subfamily B, bacterial RtxE
D YE1999 hemolysin transport protein K12532 rtxD; membrane fusion protein, RTX toxin transport system
D YE0127 ABC transporter protein K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D YE0128 HlyD family secretion protein K12537 hasE; membrane fusion protein, type I secretion system
D YE1697 putative exported protein K13408 cvaA; membrane fusion protein
D YE1696 putative ABC transport protein, ATP-binding component K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D YE3564 yst1C; general secretion pathway protein C K02452 gspC; general secretion pathway protein C
D YE3350 outC; general secretion pathway protein C K02452 gspC; general secretion pathway protein C
D YE3565 general secretion pathway protein D K02453 gspD; general secretion pathway protein D
D YE3349 outD; general secretion pathway protein D K02453 gspD; general secretion pathway protein D
D YE3566 yst1E; general secretion pathway protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D YE3348 outE; general secretion pathway protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D YE3567 yst1F; general secretion pathway protein F K02455 gspF; general secretion pathway protein F
D YE3347 outF; general secretion pathway protein K02455 gspF; general secretion pathway protein F
D YE3568 yst1G; general secretion pathway protein G precursor K02456 gspG; general secretion pathway protein G
D YE3346 outG; general secretion pathway protein G K02456 gspG; general secretion pathway protein G
D YE3569 yst1H; general secretion pathway protein H K02457 gspH; general secretion pathway protein H
D YE3570 yst1I; general secretion pathway protein I precursor K02458 gspI; general secretion pathway protein I
D YE3345 outI; general secretion pathway protein I K02458 gspI; general secretion pathway protein I
D YE3570a yst1J; putative general secretion pathway protein J precursor K02459 gspJ; general secretion pathway protein J
D YE3344A outJ; general secretion pathway protein J precursor K02459 gspJ; general secretion pathway protein J
D YE3571 yst1K; putative general secretion pathway protein K K02460 gspK; general secretion pathway protein K
D YE3344 outK; general secretion pathway protein K K02460 gspK; general secretion pathway protein K
D YE3572 yst1L; putative general secretion pathway protein L K02461 gspL; general secretion pathway protein L
D YE3343 outL; general secretion pathway protein L K02461 gspL; general secretion pathway protein L
D YE3573 yst1M; putative general secretion pathway protein M K02462 gspM; general secretion pathway protein M
D YE3574 yst1O; type 4 prepilin-like proteins leader peptide processing enzyme K02464 gspO; general secretion pathway protein O [EC:3.4.23.43 2.1.1.-]
D YE3575 yst1S; putative secretion protein K02465 gspS; general secretion pathway protein S
D YE1071 putative fimbrial biogenesis protein K02656 pilF; type IV pilus assembly protein PilF
D YE3432 conserved hypothetical protein K02669 pilT; twitching motility protein PilT
D YE3634 tadV; putative tight adherance operon protein K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D YE3635 rcpC; putative tight adherance operon protein K02279 cpaB; pilus assembly protein CpaB
D YE3636 rcpA; putative tight adherance operon protein K02280 cpaC; pilus assembly protein CpaC
D YE3637 tadZ; conserved hypothetical protein K02282 cpaE; pilus assembly protein CpaE
D YE3638 tadA; putative tight adherance operon protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D YE3639 tadB; putative tight adherance operon protein K12510 tadB; tight adherence protein B
D YE3640 tadC; putative tight adherance operon protein K12511 tadC; tight adherence protein C
D YE3641 tadD; putative tight adherance operon protein K12512 tadD; tight adherence protein D
D YE3642 tadE; putative tight adherance operon protein K12513 tadE; tight adherence protein E
D YE3643 tadF; putative tight adherance operon protein K12514 tadF; tight adherence protein F
D YE3644 tadG; putative tight adherance operon protein K12515 tadG; tight adherence protein G
D YE3316 putative exported protein K02679 ppdA; prepilin peptidase dependent protein A
D YE3315 putative prepilin peptidase dependent protein K02680 ppdB; prepilin peptidase dependent protein B
D YE3313 conserved hypothetical protein K02681 ppdC; prepilin peptidase dependent protein C
D YE0690 ppdD; putative prepilin peptidase dependent protein D precursor K02682 ppdD; prepilin peptidase dependent protein D
D YE0689 hofC; HofC protein K02504 hofB; protein transport protein HofB
D YE0688 hofC; putative type II secretion system protein K02505 hofC; protein transport protein HofC
D YE3978 conserved hypothetical protein K12288 hofM; pilus assembly protein HofM
D YE3977A Putative membrane protein K12289 hofN; pilus assembly protein HofN
D YE3977 putative membrane protein K12290 hofO; pilus assembly protein HofO
D YE3976A putative exported protein K12291 hofP; pilus assembly protein HofP
D YE3976 putative membrane transport protein K02507 hofQ; protein transport protein HofQ
D YE3435 yggT; putative membrane protein K02221 yggT; YggT family protein
D YE3129 putative exported protein K02237 comEA; competence protein ComEA
D YE1542 putative membrane protein K02238 comEC; competence protein ComEC
D YEP0038 yscC; putative type III secretion protein K03219 yscC; type III secretion protein C
D YEP0039 yscD; putative type III secretion protein K03220 yscD; type III secretion protein D
D YEP0041 yscF; putative type III secretion protein K03221 yscF; type III secretion protein F
D YEP0044 yscI; putative type III secretion protein K04053 yscI; type III secretion protein I
D YEP0045 yscJ; type III secretion lipoprotein K03222 yscJ; type III secretion protein J
D YEP0046 yscK; type III secretion protein K04054 yscK; type III secretion protein K
D YEP0047 yscL; putative type III secretion protein K03223 yscL; type III secretion protein L
D YEP0024 yscN; probable type III secretion system ATP synthase K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8]
D YEP0025 yscO; type III secretion system translocation protein K04056 yscO; type III secretion protein O
D YEP0026 yscP; putative type III secretion protein K04057 yscP; type III secretion protein P
D YE3542A ysaQ; type III secretion apparatus protein K03225 yscQ; type III secretion protein Q
D YEP0027 yscQ; putative type III secretion protein K03225 yscQ; type III secretion protein Q
D YEP0028 yscR; putative type III secretion protein K03226 yscR; type III secretion protein R
D YEP0029 yscS; putative type III secretion protein K03227 yscS; type III secretion protein S
D YEP0030 yscT; putative type III secretion protein K03228 yscT; type III secretion protein T
D YEP0031 yscU; putative type III secretion protein K03229 yscU; type III secretion protein U
D YE3546 ysaV; type III secretion system apparatus protein K03230 yscV; type III secretion protein V
D YEP0018 lcrD; low calcium response locus membrane protein d K03230 yscV; type III secretion protein V
D YEP0023 yopN; type III secretion outer membrane protein K04058 yscW; type III secretion protein W
D YEP0020 yscX; conserved hypothetical protein K04059 yscX; type III secretion protein X
D YE3548 ysaC; possible type III secretion system protein K22504 invG; type III secretion system outer membrane ring protein
D YE3553 ysaJ; type III secretion system apparatus lipoprotein K22505 prgK; type III secretion system inner membrane ring protein
D YE3544 ysaN; type III secretion sytem protein K22506 spaL; type III secretion system ATPase [EC:7.4.2.8]
D YE3542 ysaR; type III secretion apparatus protein K22507 spaP; type III secretion system export apparatus protein
D YE3541 ysaS; type III secretion apparatus protein K22508 spaQ; type III secretion system export apparatus protein
D YE3540 ysaT; putative type III secretion apparatus protein K22509 spaR; type III secretion system export apparatus protein
D YE3539 ysaU; putative type III secretion apparatus protein K22510 spaS; type III secretion system export apparatus switch protein
D YE3547 ysaW; type III secreted effector protein K22511 invE; type III secretion system protein
D YEP0036 yscA; conserved hypothetical hydrophobic protein K04048 yscA; type III secretion protein A
D YEP0037 yscB; conserved hypothetical protein K04049 yscB; type III secretion protein B
D YEP0040 yscE; putative type III secretion protein K04050 yscE; type III secretion protein E
D YEP0042 yscG; putative type III secretion protein K04051 yscG; type III secretion protein G
D YEP0043 yscH; putative type III secretion protein K04052 yscH; type III secretion protein H
D YEP0048 yscM; putative type III secretion regulatory protein K04055 yscM; type III secretion protein M
D YEP0086 yscM2; regulatory protein K04055 yscM; type III secretion protein M
D YEP0019 yscY; conserved hypothetical protein K04060 yscY; type III secretion protein Y
D YE3545 ysaK; type III secretion sytem protein K22512 spaK; type III secretion system chaperone
D YE3550 hypothetical protein K22488 prgH; type III secretion system protein
D YE3552 ysaI; putative virulence associated protein K22487 prgJ; type III secretion system protein
D YE2566 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D YE2567 flhB; flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D YE2537 fliF; flagellar M-ring protein K02409 fliF; flagellar M-ring protein FliF
D YE2539 fliH; flagellar assembly protein K02411 fliH; flagellar assembly protein FliH
D YE2540 fliI; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D YE2545 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D YE2546 fliO; flagellar protein FliO K02418 fliO; flagellar protein FliO/FliZ
D YE2547 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D YE2548 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D YE2549 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D YE3515 conserved hypothetical protein K12055 K12055; chromosome partitioning related protein ParA
D YE3493 TraG-family protein K12071 traD; conjugal transfer pilus assembly protein TraD
D YE3379 dsbC; thiol:disulfide interchange protein (DsbC) K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D YE1178 putative conjugal transfer protein K20266 trbJ; type IV secretion system protein TrbJ
D YE1177 putative conjugal transfer protein K07344 trbL; type IV secretion system protein TrbL
D YEP0066 putative YadA invasin K12341 yadA; adhesin YadA
D YE2408 putative hemolysin activator protein K11017 shlB; hemolysin activation/secretion protein
D YE2407 putative hemolysin K11016 shlA; hemolysin
D YE2685 putative exported protein K11891 impL; type VI secretion system protein ImpL
D YE2686 putative OmpA family protein K11892 impK; type VI secretion system protein ImpK
D YE2687 conserved hypothetical protein K11893 impJ; type VI secretion system protein ImpJ
D YE2698 conserved hypothetical protein K11895 impH; type VI secretion system protein ImpH
D YE2697 conserved hypothetical protein K11896 impG; type VI secretion system protein ImpG
D YE2681 conserved hypothetical protein K11897 impF; type VI secretion system protein ImpF
D YE2690 conserved hypothetical protein K11900 impC; type VI secretion system protein ImpC
D YE2691 conserved hypothetical protein K11901 impB; type VI secretion system protein ImpB
D YE2699 conserved hypothetical protein K11902 impA; type VI secretion system protein ImpA
D YE2689 conserved hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp
D YE2684 conserved hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG
D YE2688 putative exported protein K11906 vasD; type VI secretion system protein VasD
D YE2696 clpB5; Clp ATPase K11907 vasG; type VI secretion system protein VasG
D YE2682 conserved hypothetical protein K11898 impE; type VI secretion system protein ImpE
D YE0161 putative fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D YE2695 frimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D YE2664 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D YE0160 putative fimbrial chaperone K07346 fimC; fimbrial chaperone protein
D YE1858 putative chaperone protein K07346 fimC; fimbrial chaperone protein
D YE0159 putative outer membrane usher protein K07347 fimD; outer membrane usher protein
D YE1857 probable outer membrane usher protein K07347 fimD; outer membrane usher protein
D YE1112 outer membrane usher protein K07347 fimD; outer membrane usher protein
D YE1454 myfC; outer membrane usher protein K07347 fimD; outer membrane usher protein
D YE2693 outer membrane usher protein K07347 fimD; outer membrane usher protein
D YE2666 probable fimbrial usher protein K07347 fimD; outer membrane usher protein
D YE1860 putative exported protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D YE1856 putative membrane protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D YE1859 putative exported protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D YE1861 putative exported protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D YE0781 mrfC; fimbrial outer membrane usher protein K12518 papC; outer membrane usher protein PapC
D YE0782 mrfD; pili chaperone protein K12519 papD; chaperone protein PapD
D YE0681 secA; preprotein translocase SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D YE0080 secB; protein-export protein K03071 secB; preprotein translocase subunit SecB
D YE3164 secD; protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D YE0279 secE; preprotein translocase SecE subunit K03073 secE; preprotein translocase subunit SecE
D YE3163 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D YE0431 secG; protein-export membrane protein K03075 secG; preprotein translocase subunit SecG
D YE0680 putative exported protein K13301 secM; secretion monitor
D YE3903 secY; preprotein translocase SecY subunit K03076 secY; preprotein translocase subunit SecY
D YE0842 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D YE0225 ftsY; cell division protein K03110 ftsY; fused signal recognition particle receptor
D YE3165 putative membrane protein K03210 yajC; preprotein translocase subunit YajC
D YE4177 yidC; probable membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D YE0259 tatA; Sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D YE0260 tatB; Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D YE0261 tatC; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D YE3009 tatE; sec-independent protein translocase protein K03425 tatE; sec-independent protein translocase protein TatE
C 02042 Bacterial toxins [BR:yen02042]
D YE2124 ytxA; putative enterotoxin subunit K11023 ptxA; pertussis toxin subunit 1 [EC:2.4.2.-]
D YE1123A putative exported protein K19298 subB; subtilase cytotoxin, subunit B
D YE0403 putative membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D YE0840 yfjD; putative membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D YE2407 putative hemolysin K11016 shlA; hemolysin
D YE2408 putative hemolysin activator protein K11017 shlB; hemolysin activation/secretion protein
D YE3388 putative hemolysin III K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:yen02022]
D YE3181 phoR; phosphate regulon sensor protein PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D YE3182 phoB; phosphate regulon transcriptional regulatory protein K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D YE1717 phoQ; sensor protein kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D YE1718 phoP; response regulator protein K07660 phoP; two-component system, OmpR family, response regulator PhoP
D YE4005 envZ; osmolarity sensor protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D YE4004 ompR; transcriptional regulatory protein K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D YE2084 rstB; two-component regulatory system, sensor kinase protein K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D YE2083 rstA; two-component regulatory system, response regulator protein K07661 rstA; two-component system, OmpR family, response regulator RstA
D YE0085 cpxA; two component sensor kinase K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D YE0086 cpxR; two component system response regulatory protein K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D YE3383 creC; putative histidine kinase sensor K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3]
D YE3384 creB; putative response regulator K07663 creB; two-component system, OmpR family, catabolic regulation response regulator CreB
D YE1105 baeS; two-component system, sensor kinase K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3]
D YE1104 baeR; two-component system response regulator K07664 baeR; two-component system, OmpR family, response regulator BaeR
D YE0422 basS; two-component system sensor protein K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3]
D YE0423 basR; two-component system response regulator K07771 basR; two-component system, OmpR family, response regulator BasR
D YE3025 putative two-component system sensor protein K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D YE3024 copR; transcriptional activator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D YE2963 kdpD; two-component regulatory protein sensor kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D YE2964 kdpE; two-component regulatory protein response regulator KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D YE3733 arcB; aerobic respiration control sensor/response regulatory protein K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D YE0595 arcA; aerobic respiration control protein K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA
D YE1202 putative two-component system sensor kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D YE1201 putative two-component system response regulator K02483 K02483; two-component system, OmpR family, response regulator
D YE2473 narX; nitrate/nitrite sensor protein K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D YE1153 narP; nitrate/nitrite response regulator protein NarP K07685 narP; two-component system, NarL family, nitrate/nitrite response regulator NarP
D YE4088 uhpB; two-component system, sensor kinase K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D YE4089 uhpA; two-component system response regulator K07686 uhpA; two-component system, NarL family, uhpT operon response regulator UhpA
D YE2657 sensor kinase protein K20263 fusK; two-component system, NarL family, sensor histidine kinase FusK [EC:2.7.13.3]
D YE2656 GerR-family transcriptional regulatory protein K20264 fusR; two-component system, NarL family, response regulator FusR
D YE1396 rcsC; two component sensor kinase/response regulator protein RcsC K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3]
D YE1398 putative two component sensor kinase K07676 rcsD; two-component system, NarL family, sensor histidine kinase RcsD [EC:2.7.13.3]
D YE1397 rcsB; probable two component response regulator component B K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D YE0742 barA; two-component regulatory protein K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D YE1831 uvrY; response regulator protein K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D YE2663 putative virulence sensor protein K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D YE2662 putative two-component response regulator K07688 fimZ; two-component system, NarL family, response regulator, fimbrial Z protein, FimZ
D YE3560 ysrR; response regulator protein K07688 fimZ; two-component system, NarL family, response regulator, fimbrial Z protein, FimZ
D YE3578 response regulator protein K07688 fimZ; two-component system, NarL family, response regulator, fimbrial Z protein, FimZ
D YE2654 citA; sensor kinase protein K07700 dpiB; two-component system, CitB family, cit operon sensor histidine kinase CitA [EC:2.7.13.3]
D YE2655 citB; response regulator protein K07702 dpiA; two-component system, CitB family, response regulator CitB
D YE2505 two-component system, sensor kinase K07701 dcuS; two-component system, CitB family, sensor histidine kinase DcuS [EC:2.7.13.3]
D YE2506 two-component system, sensor regulator K07703 dcuR; two-component system, CitB family, response regulator DcuR
D YE1228 two-component system histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D YE4014 putative membrane protein K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D YE0849 two-component system response regulator K02477 K02477; two-component system, LytTR family, response regulator
D YE1227 putative two-component system response-regulator K02477 K02477; two-component system, LytTR family, response regulator
D YE0026 ntrB; Two component regulatory protein involved in nitrogen assimilation K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D YE0025 ntrC; nitrogen regulation protein K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D YE1035 two-component system sensor kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D YE1037 two-component system response regulator K07715 glrR; two-component system, NtrC family, response regulator GlrR
D YE2577 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D YE2570 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D YE2571 cheB; protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D YE2673 putative chemotaxis protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D YE1614 ttrS; tetrathionate reductase complex: sensory transduction histidine kinase K13040 ttrS; two-component system, LuxR family, sensor histidine kinase TtrS [EC:2.7.13.3]
D YE1613 ttrR; tetrathionate reductase complex: two-component system response regulator K13041 ttrR; two-component system, LuxR family, response regulator TtrR
D YE0311 putative two-component response regulator K14979 ssrB; two-component system, LuxR family, secretion system response regulator SsrB
D YE2243 probable response regulator K02485 rssB; two-component system, response regulator
C 02035 Bacterial motility proteins [BR:yen02035]
D YE2577 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D YE2576 cheW; chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D YE2572 cheR; chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D YE2571 cheB; protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D YE2570 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D YE2569 cheZ; chemotaxis protein CheZ K03414 cheZ; chemotaxis protein CheZ
D YE2673 putative chemotaxis protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D YE2971 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D YE4183 Putative methyl-accepting chemotaxis receptor protein K03406 mcp; methyl-accepting chemotaxis protein
D YE1405 tsr2; putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D YE2848 putative chemotactic transducer K03406 mcp; methyl-accepting chemotaxis protein
D YE3615 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D YE3338 cheD; putative methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D YE2575 cheD; methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D YE0409 methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D YE4139 tar; methyl-accepting chemotaxis protein II K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor
D YE2588 putative methyl-accepting chemotaxis protein K05876 trg; methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor
D YE2573 methyl-accepting chemotaxis protein K05877 tap; methyl-accepting chemotaxis protein IV, peptide sensor receptor
D YE1731 aer; putative methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D YE2539 fliH; flagellar assembly protein K02411 fliH; flagellar assembly protein FliH
D YE2540 fliI; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D YE2541 fliJ; flagellar protein FliJ K02413 fliJ; flagellar protein FliJ
D YE2546 fliO; flagellar protein FliO K02418 fliO; flagellar protein FliO/FliZ
D YE2547 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D YE2548 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D YE2549 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D YE2566 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D YE2567 flhB; flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D YE2565 flhE; flagellar protein FlhE precursor K03516 flhE; flagellar protein FlhE
D YE2538 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D YE2544 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D YE2545 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D YE2537 fliF; flagellar M-ring protein K02409 fliF; flagellar M-ring protein FliF
D YE2553 flgI; flagellar P-ring protein precursor K02394 flgI; flagellar P-ring protein FlgI
D YE2561 flgA; flagella basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D YE2554 flgH; flagellar L-ring protein precursor K02393 flgH; flagellar L-ring protein FlgH
D YE2543 fliL; flagellar protein FliL K02415 fliL; flagellar protein FliL
D YE2536 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D YE2542 fliK; flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK
D YE2560 flgB; flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D YE2559 flgC; flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D YE2558 flgD; basal-body rod modification protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D YE2556 flgF; flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D YE2555 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D YE2552 flgJ; flagellar protein FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D YE2557 flgE; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D YE2551 flgK; flagellar hook-associated protein 1 K02396 flgK; flagellar hook-associated protein 1
D YE2550 flgL; flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL
D YE2563 flgN; flagella synthesis protein FlgN K02399 flgN; flagellar biosynthesis protein FlgN
D YE2520 fliB; flagellin lysine-N-methylase K18475 fliB; lysine-N-methylase [EC:2.1.1.-]
D YE2521 fliC2; flagellin K02406 fliC; flagellin
D YE2522 fliC; thermoregulated motility protein K02406 fliC; flagellin
D YE2523 fliC3; flagellin K02406 fliC; flagellin
D YE2524 fliD; flagellar hook-associated protein 2 K02407 fliD; flagellar hook-associated protein 2
D YE2525 fliS; flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D YE2526 fliT; flagella protein K02423 fliT; flagellar protein FliT
D YE2581 flhD; flagellar transcriptional activator K02403 flhD; flagellar transcriptional activator FlhD
D YE2580 flhC; flagellum biosynthesis transcription activator K02402 flhC; flagellar transcriptional activator FlhC
D YE2519 fliA; RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
D YE2579 motA; chemotaxis MotA protein K02556 motA; chemotaxis protein MotA
D YE2578 motB; chemotaxis MotB protein K02557 motB; chemotaxis protein MotB
D YE2516 fliY; putative cystine-binding periplasmic protein K02424 tcyA; L-cystine transport system substrate-binding protein
D YE2518 fliZ; putative alternative sigma factor regulatory protein K02425 fliZ; regulator of sigma S factor FliZ
D YE2562 flgM; negative regulator of flagellin synthesis K02398 flgM; negative regulator of flagellin synthesis FlgM
D YE3432 conserved hypothetical protein K02669 pilT; twitching motility protein PilT
D YE1071 putative fimbrial biogenesis protein K02656 pilF; type IV pilus assembly protein PilF
D YE3634 tadV; putative tight adherance operon protein K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D YE3635 rcpC; putative tight adherance operon protein K02279 cpaB; pilus assembly protein CpaB
D YE3636 rcpA; putative tight adherance operon protein K02280 cpaC; pilus assembly protein CpaC
D YE3637 tadZ; conserved hypothetical protein K02282 cpaE; pilus assembly protein CpaE
D YE3638 tadA; putative tight adherance operon protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D YE0161 putative fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D YE2695 frimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D YE2664 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D YE0160 putative fimbrial chaperone K07346 fimC; fimbrial chaperone protein
D YE1858 putative chaperone protein K07346 fimC; fimbrial chaperone protein
D YE0159 putative outer membrane usher protein K07347 fimD; outer membrane usher protein
D YE1857 probable outer membrane usher protein K07347 fimD; outer membrane usher protein
D YE1112 outer membrane usher protein K07347 fimD; outer membrane usher protein
D YE1454 myfC; outer membrane usher protein K07347 fimD; outer membrane usher protein
D YE2693 outer membrane usher protein K07347 fimD; outer membrane usher protein
D YE2666 probable fimbrial usher protein K07347 fimD; outer membrane usher protein
D YE1860 putative exported protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D YE1856 putative membrane protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D YE1859 putative exported protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D YE1861 putative exported protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:yen04812]
D YE3805 mreB; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D YE0677 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D YE0676 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D YE2371 minC; cell division inhibitor K03610 minC; septum site-determining protein MinC
D YE2372 minD; septum site-determining protein K03609 minD; septum site-determining protein MinD
D YE2373 minE; cell division topological specificity factor K03608 minE; cell division topological specificity factor
D YEP0072 conserved hypothetical protein K03496 parA; chromosome partitioning protein
D YEP0062 putative plasmid partitioning transcription repressor K03496 parA; chromosome partitioning protein
D YEP0061 putative plasmid partitioning control protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:yen04147]
D YE3090 htpG; heat shock protein HtpG K04079 HSP90A; molecular chaperone HtpG
D YE0747 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D YE2265 gapA; glyceraldehyde 3-phosphate dehydrogenase A K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D YE3414 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D YE2385 pykA; pyruvate kinase II K00873 PK; pyruvate kinase [EC:2.7.1.40]
D YE2164 pykF; pyruvate kinase I K00873 PK; pyruvate kinase [EC:2.7.1.40]
D YE3960 ppiA; peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D YE3174 ahpC; putative alkyl hydroperoxide reductase subunit c K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D YE0354 groEL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D YE0609 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D YE3870 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D YE1081 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D YE3927 tufA; elongation factor Tu K02358 tuf; elongation factor Tu
D YE0278 tufA; elongation factor TU K02358 tuf; elongation factor Tu
D YE1701 conserved hypothetical protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D YE2008 putative membrane protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D YE0656 putative AMP-binding enzyme-family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D YE2375 fadD; long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D YE3089 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D YE3094 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D YE0121 argH; putative argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D YE2680 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D YE1469 uptH; putative cystathionine gamma-synthase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D YE2045 putative hydrolase K01482 DDAH; dimethylargininase [EC:3.5.3.18]
D YE0410 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D YE2919 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D YE4013 glgB; 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D YE0099 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D YE0824 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D YE0027 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D YE0263 hemB; delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D YE2068 phoA; alkaline phosphatase precursor K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D YE3400 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D YE2604 putative oxidoreductase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D YE0303 purH; bifunctional purine biosynthesis protein PurH [includes: phosphoribosylaminoimidazolecarboxamide formyltransferase and IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D YE0131 putative pyridine nucleotide-disulphide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YE0702 lpdA; dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YE2383 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D YE0093 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D YE2924 gpmA; phosphoglycerate mutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D YE0360 lipoprotein K03098 APOD; apolipoprotein D and lipocalin family protein
C 02048 Prokaryotic defense system [BR:yen02048]
D YE3972 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D YE1681 prophage encoded DNA modification methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D YE2362 dcm; putative cytosine-specific modification methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D YE1160 conserved hypothetical protein K06218 relE; mRNA interferase RelE/StbE
D YE0510A conserved hypothetical protein K06218 relE; mRNA interferase RelE/StbE
D YE0510 relB; RelB protein K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
D YE1159 conserved hypothetical protein K18923 stbD; antitoxin StbD
D YE1929 conserved hypothetical protein K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-]
D YE1110 conserved hypothetical protein K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-]
D YE1928 DinJ-like protein K07473 dinJ; DNA-damage-inducible protein J
D YE0647 putative DNA-damage-inducible protein K07473 dinJ; DNA-damage-inducible protein J
D YE0321 conserved hypothetical protein K19159 yefM; antitoxin YefM
D YE3843 putative transcriptional regulator K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D YE1175 conserved hypothetical protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D YE4128 conserved hypothetical protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D YE3842 putative transcriptional regulator K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D YE1233 conserved hypothetical protein K18843 hicB; antitoxin HicB
D YE2266 hypothetical protein K19160 yafO; mRNA interferase YafO [EC:3.1.-.-]
D YE3115 ymoA; modulating protein YmoA (histone-like protein) K05839 hha; haemolysin expression modulating protein
D YE3114 conserved hypothetical protein K19162 tomB; hha toxicity modulator TomB
D YE2119 pspC; phage shock protein C K03973 pspC; phage shock protein C
D YE2120 pspB; phage shock protein B K03970 pspB; phage shock protein B
D YE3480 ccdB; cytotoxic protein K19163 ccdB; toxin CcdB
D YE3481 ccdA; gyrase inhibitor antitoxin K19164 ccdA; antitoxin CcdA
D YEP0057 conserved hypothetical protein K19092 parE1_3_4; toxin ParE1/3/4
D YEP0058 conserved hypothetical protein K07746 parD1_3_4; antitoxin ParD1/3/4
D YE2032 Phage/plasmid maintenance toxin/antidote system protein (toxin) K07341 doc; death on curing protein
D YE2033 Phage/plasmid maintenance toxin/antidote system protein (antidote) K19165 phd; antitoxin Phd
D YE1658 conserved hypothetical phage protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D YE4141 Hypothetical protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D YE4142 Hypothetical protein K18829 mvpT; antitoxin VapB
D YE1659 hypothetical phage protein K18829 mvpT; antitoxin VapB
D YE0492 conserved hypothetical protein K19334 tabA; biofilm protein TabA
D YE1623 conserved hypothetical protein K12148 bssS; biofilm regulator BssS
D YE1972 putative exported protein K12151 bhsA; multiple stress resistance protein BhsA
D YE0677 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D YE3805 mreB; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D YE3656 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D YE3660 parE; topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D YE1215 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D YE3459 hypothetical protein K18837 cbtA; cytoskeleton-binding toxin CbtA and related proteins
D YE3385 conserved hypothetical protein K19168 cptA; toxin CptA
D YE3386 conserved hypothetical protein K09159 cptB; antitoxin CptB
D YE1057 iscS; putative aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels [BR:yen04040]
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:yen04090]
C 01504 Antimicrobial resistance genes [BR:yen01504]
D YE4127 mdfA; multidrug translocase K08160 mdfA; MFS transporter, DHA1 family, multidrug/chloramphenicol efflux transport protein
D YE1246 MFS-family membrane transport protein K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D YE2019 blaA; beta-lactamase precursor K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D YE3025 putative two-component system sensor protein K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D YE3024 copR; transcriptional activator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D YE1717 phoQ; sensor protein kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D YE1718 phoP; response regulator protein K07660 phoP; two-component system, OmpR family, response regulator PhoP
D YE0443 multidrug efflux protein K03585 acrA; membrane fusion protein, multidrug efflux system
D YE3100 acrA; multidrug efflux protein K03585 acrA; membrane fusion protein, multidrug efflux system
D YE3101 acrB; multidrug efflux protein K18138 acrB; multidrug efflux pump
D YE0444 multidrug efflux protein K18138 acrB; multidrug efflux pump
D YE3595 putative integral membrane efflux protein K18138 acrB; multidrug efflux pump
D YE0445 ibeB; probable outer membrane efflux lipoprotein K18139 oprM; outer membrane protein, multidrug efflux system
D YE3060 cueR; putative regulatory protein K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D YE3665 hasF; ABC-transporter outer membrane component K12340 tolC; outer membrane protein
D YE1563 ompF; putative outer membrane porin F protein K09476 ompF; outer membrane pore protein F
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins [BR:yen00536]
D YE3454 putative hemolysin K15125 fhaB; filamentous hemagglutinin
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:yen00537]
D YE2068 phoA; alkaline phosphatase precursor K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins [BR:yen03200]
D YE1816 putative phage endopeptidase K14744 rzpD; prophage endopeptidase [EC:3.4.-.-]
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:yen03100]
D tRNA-Ala-1 tRNA-Ala_(TGC); tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D tRNA-Ala-4 tRNA-Ala_(TGC); tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D tRNA-Ala-5 tRNA-Ala_(TGC); tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D tRNA-Ala-2 tRNA-Ala_(GGC); tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D tRNA-Ala-3 tRNA-Ala_(GGC); tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D tRNA-Arg-5 tRNA-Arg_(TCT); tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Arg-1 tRNA-Arg_(CCG); tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Arg-2 tRNA-Arg_(ACG); tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Arg-3 tRNA-Arg_(ACG); tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Arg-4 tRNA-Arg_(CCT); tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Asn-1 tRNA-Asn_(GTT); tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D tRNA-Asn-2 tRNA-Asn_(GTT); tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D tRNA-Asn-3 tRNA-Asn_(GTT); tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D tRNA-Asp-1 tRNA-Asp_(GTC); tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D tRNA-Asp-2 tRNA-Asp_(GTC); tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D tRNA-Asp-3 tRNA-Asp_(GTC); tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D tRNA-Cys tRNA-Cys_(GCA); tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D tRNA-Gln-3 tRNA-Gln_(CTG); tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D tRNA-Gln-1 tRNA-Gln_(TTG); tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D tRNA-Gln-2 tRNA-Gln_(TTG); tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D tRNA-Glu-1 tRNA-Glu_(TTC); tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D tRNA-Glu-2 tRNA-Glu_(TTC); tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D tRNA-Glu-3 tRNA-Glu_(TTC); tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D tRNA-Glu-4 tRNA-Glu_(TTC); tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D tRNA-Gly-7 tRNA-Gly_(CCC); tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-Gly-1 tRNA-Gly_(TCC); tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-Gly-5 tRNA-Gly_(TCC); tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-Gly-2 tRNA-Gly_(GCC); tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-Gly-3 tRNA-Gly_(GCC); tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-Gly-4 tRNA-Gly_(GCC); tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-Gly-6 tRNA-Gly_(GCC); tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-His tRNA-His_(GTG); tRNA-His K14226 tRNA-His; tRNA His
D tRNA-Ile-1 tRNA-Ile_(GAT); tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D tRNA-Ile-2 tRNA-Ile_(GAT); tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D tRNA-Ile-3 tRNA-Ile_(GAT); tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D tRNA-Leu-2 tRNA-Leu_(GAG); tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-7 tRNA-Leu_(TAG); tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-3 tRNA-Leu_(CAA); tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-1 tRNA-Leu_(CAG); tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-4 tRNA-Leu_(CAG); tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-5 tRNA-Leu_(CAG); tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-6 tRNA-Leu_(TAA); tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Lys-1 tRNA-Lys_(TTT); tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D tRNA-Lys-3 tRNA-Lys_(TTT); tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D tRNA-Lys-4 tRNA-Lys_(TTT); tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D tRNA-Lys-5 tRNA-Lys_(TTT); tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D tRNA-Lys-6 tRNA-Lys_(TTT); tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D tRNA-Lys-2 tRNA-Lys_(CTT); tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D tRNA-Met-7 tRNA-Met_(CAT); tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Met-1 tRNA-Met_(CAT); tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Met-2 tRNA-Met_(CAT); tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Met-3 tRNA-Met_(CAT); tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Met-4 tRNA-Met_(CAT); tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Met-5 tRNA-Met_(CAT); tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Met-6 tRNA-Met_(CAT); tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Phe-1 tRNA-Phe_(GAA); tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D tRNA-Phe-2 tRNA-Phe_(GAA); tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D tRNA-Pro-2 tRNA-Pro_(GGG); tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D tRNA-Pro-1 tRNA-Pro_(TGG); tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D tRNA-Pro-3 tRNA-Pro_(TGG); tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D tRNA-Ser-3 tRNA-Ser_(TGA); tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D tRNA-Ser-1 tRNA-Ser_(GCT); tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D tRNA-Ser-2 tRNA-Ser_(TGA); tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D tRNA-Ser-4 tRNA-Ser_(GGA); tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D tRNA-Ser-5 tRNA-Ser_(GGA); tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D tRNA-Thr-2 tRNA-Thr_(GGT); tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D tRNA-Thr-5 tRNA-Thr_(GGT); tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D tRNA-Thr-1 tRNA-Thr_(TGT); tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D tRNA-Thr-3 tRNA-Thr_(TGT); tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D tRNA-Thr-4 tRNA-Thr_(CGT); tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D tRNA-Trp tRNA-Trp_(CCA); tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D tRNA-Tyr-1 tRNA-Tyr_(GTA); tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D tRNA-Tyr-2 tRNA-Tyr_(GTA); tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D tRNA-Val-4 tRNA-Val_(GAC); tRNA-Val K14237 tRNA-Val; tRNA Val
D tRNA-Val-1 tRNA-Val_(TAC); tRNA-Val K14237 tRNA-Val; tRNA Val
D tRNA-Val-2 tRNA-Val_(TAC); tRNA-Val K14237 tRNA-Val; tRNA Val
D tRNA-Val-3 tRNA-Val_(TAC); tRNA-Val K14237 tRNA-Val; tRNA Val
D tRNA-Val-5 tRNA-Val_(GAC); tRNA-Val K14237 tRNA-Val; tRNA Val
D tRNA-Val-6 tRNA-Val_(GAC); tRNA-Val K14237 tRNA-Val; tRNA Val
D tRNA-Sec tRNA-SelC(p)_(TCA); tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D 16S_rRNA-6 16S_rRNA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D 16S_rRNA-1 16S_rRNA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D 16S_rRNA-2 16S_rRNA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D 16S_rRNA-7 16S_rRNA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D 16S_rRNA-3 16S_rRNA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D 16S_rRNA-4 16S_rRNA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D 16S_rRNA-5 16S_rRNA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D 23S_rRNA-2 23S_rRNA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D 23S_rRNA-3 23S_rRNA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D 23S_rRNA-1 23S_rRNA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D 23S_rRNA-6 23S_rRNA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D 23S_rRNA-4 23S_rRNA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D 23S_rRNA-5 23S_rRNA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D 23S_rRNA-7 23S_rRNA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D 5S_rRNA-2 5S_rRNA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 5S_rRNA-1 5S_rRNA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 5S_rRNA-8 5S_rRNA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 5S_rRNA-6 5S_rRNA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 5S_rRNA-4 5S_rRNA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 5S_rRNA-3 5S_rRNA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 5S_rRNA-5 5S_rRNA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 5S_rRNA-7 5S_rRNA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D misc_RNA.29 ffs; Signal recognition particle (SRP) RNA (RF00169) as predicted by Rfam, score 92.61, positions 1 to 100 K01983 ffs; SRP RNA
D misc_RNA.23 RprA (RF00034) as predicted by Rfam, score 40.71,positions 1 to 108 K18518 rprA; small regulatory RNA RprA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D YE1363 idnO; gluconate 5-dehydrogenase K00046 idnO; gluconate 5-dehydrogenase [EC:1.1.1.69]
D YE3652 putative aldo/keto reductase family protein K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D YE3031 putative aldo/keto reductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D YE0912 putative aldo/keto reductase K06222 dkgB; 2,5-diketo-D-gluconate reductase B [EC:1.1.1.346]
D YE3616 conserved hypothetical protein K22025 denD; D-erythronate 2-dehydrogenase [EC:1.1.1.410]
D YE2761 putative dehydrogenase K08317 hcxA; hydroxycarboxylate dehydrogenase A [EC:1.1.1.-]
D YE1221 putative ion channel protein K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-]
D YE0965 putative oxidoreductase K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-]
D YE1370 putative dehydrogenase subunit K23273 fdhL; fructose 5-dehydrogenase large subunit [EC:1.1.5.14]
D YE1370A putative dehydrogenase subunit K23274 fdhS; fructose 5-dehydrogenase small subunit [EC:1.1.5.14]
D YE1084 hypothetical protein K23274 fdhS; fructose 5-dehydrogenase small subunit [EC:1.1.5.14]
D YE0966 putative exported protein K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-]
D YE3698 fadH; 2,4-dienoyl-CoA reductase K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34]
D YE2584 putative oxidoreductase K23256 curA; NADPH-dependent curcumin reductase [EC:1.3.1.-]
D YE1622 solA; putative sarcosine oxidase K02846 solA; N-methyl-L-tryptophan oxidase [EC:1.5.3.-]
D YE3850 qor; quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D YE3657 mdaB; putative modulator of drug activity K03923 mdaB; NADPH dehydrogenase (quinone) [EC:1.6.5.10]
D YE2092 acpD; acyl carrier protein phosphodiesterase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D YE0404 msrA; peptide methionine sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D YE2264 conserved hypothetical protein K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D YE2038 yghU; putative glutathione S-transferase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D YE3719 conserved hypothetical protein K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D YE3808 conserved hypothetical protein K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-]
D YE3562 putative membrane protein K12262 cybB; superoxide oxidase [EC:1.10.3.17]
D YE1135 bcp; bacterioferritin comigratory protein K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D YE2113 tpx; thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D YE4091 putative osmotic/stress related protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D YE1187 conserved hypothetical protein K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-]
D YE4023 conserved hypothetical protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D YE2277 conserved hypothetical protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D YE1046 hmp; flavohemoprotein K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17]
D YE1795 ftnA; ferritin K02217 ftnA; ferritin [EC:1.16.3.2]
D YE0712 yacK; putative exported protein K14588 cueO; cuproxidase [EC:1.16.3.4]
D YE0096 fpr; ferredoxin--NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D YE3364 arsC; arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D YE3475 arsC2; arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D YE1131 yfgD; putative arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D YE0481 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D YE0645 putative pyruvate formate-lyase 3 activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D YE1531 pflA; pyruvate formate-lyase 1 activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D YE1509 hcr; putative oxidoreductase K11933 hcr; NADH oxidoreductase Hcr [EC:1.-.-.-]
D YE2798 hyfA; hydrogenase-4 component A K12136 hyfA; hydrogenase-4 component A [EC:1.-.-.-]
D YE2799 hyfB; hydrogenase-4 component B K12137 hyfB; hydrogenase-4 component B [EC:1.-.-.-]
D YE2800 hyfC; hydrogenase-4 component C K12138 hyfC; hydrogenase-4 component C [EC:1.-.-.-]
D YE2801 hyfD; hydrogenase-4 component D K12139 hyfD; hydrogenase-4 component D [EC:1.-.-.-]
D YE2802 hyfE; hydrogenase-4 component E K12140 hyfE; hydrogenase-4 component E [EC:1.-.-.-]
D YE2803 hyfF; hydrogenase-4 component F K12141 hyfF; hydrogenase-4 component F [EC:1.-.-.-]
D YE2804 hyfG; hydrogenase-4 component G K12142 hyfG; hydrogenase-4 component G [EC:1.-.-.-]
D YE2807 hyfJ; hydrogenase-4 component J K12145 hyfJ; hydrogenase-4 component J [EC:1.-.-.-]
D YE0773 pcm; protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D YE2161 cfa; cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D YE2842 tam; putative trans-aconitate methyltransferase K00598 tam; trans-aconitate 2-methyltransferase [EC:2.1.1.144]
D YE2489 tehB; putative tellurite resistance protein K16868 tehB; tellurite methyltransferase [EC:2.1.1.265]
D YE0335 hemN; putative coproporphyrinogen III oxidase K21936 chuW; anaerobilin synthase [EC:2.1.1.342]
D YE0544 putative transferase K00612 nodU; carbamoyltransferase [EC:2.1.3.-]
D YE1604 mdoC; osmoregulated periplasmic glucan biosynthetic protein K11941 mdoC; glucans biosynthesis protein C [EC:2.1.-.-]
D YE2989 cutE; putative apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D YE0452 putative acetyltransferase K03824 yhbS; putative acetyltransferase [EC:2.3.1.-]
D YE4153 putative acetyltransferase K03826 yiaC; putative acetyltransferase [EC:2.3.1.-]
D YE0497 putative acetyltransferase K03828 yjgM; putative acetyltransferase [EC:2.3.1.-]
D YE2245 hypothetical protein K03829 yedL; putative acetyltransferase [EC:2.3.1.-]
D YE1520 aat; putative leucyl/phenylalanyl-tRNA-protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D YE3246 conserved hypothetical protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25]
D YE3318 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D YE2740 pduO; putative propanediol utilization protein: B12 related K27270 pduO; corrinoid adenosyltransferase [EC:2.5.1.-]
D YE3214 apbE; thiamine biosynthesis lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D YE2503 conserved hypothetical protein K21948 otnK; 3-dehydrotetronate 4-kinase [EC:2.7.1.217]
D YE2177 Conserved hypothetical protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D YE3674 glnE; glutamate-ammonia-ligase adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D YE2425 putative inner membrane protein K18967 dge1; diguanylate cyclase [EC:2.7.7.65]
D YE2183 conserved hypothetical protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D YE3879 aceK; isocitrate dehydrogenase kinase/phosphatase K00906 aceK; isocitrate dehydrogenase kinase/phosphatase [EC:2.7.11.5 3.1.3.-]
D YE3622 fes; enterochelin esterase K07214 fes; iron(III)-enterobactin esterase [EC:3.1.1.108]
D YE2936 conserved hypothetical protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D YE0904 putative thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D YE3016 serine/threonine protein phosphatase K07313 pphA; serine/threonine protein phosphatase 1 [EC:3.1.3.16]
D YE2208 trpH; conserved hypothetical protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D YE1278 sixA; putative phosphohistidine phosphatase K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D YE1560 putative exported protein K26148 K26148; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D YE1431 putative membrane protein K26148 K26148; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D YE3425 endA; endonuclease I K01150 endA; deoxyribonuclease I [EC:3.1.21.1]
D YE0262 tatD; deoxyribonuclease TatD (pseudogene) K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D YE0568 putative metalloenzyme K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D YE1642 putative deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D YE2969 conserved hypothetical protein K01175 ybfF; esterase [EC:3.1.-.-]
D YE3204 conserved hypothetical protein K11750 frsA; esterase FrsA [EC:3.1.-.-]
D YE4072A bcsZ; endoglucanase precursor (endo-1,4-beta-glucanase involved in cellulose degradation) K20542 bcsZ; endoglucanase [EC:3.2.1.4]
D YE1840 bacteriophage lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D YE2334 putative phage lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D YE0164 pehX; exo-poly-alpha-D-galacturonosidase precursor K18650 pehX; exo-poly-alpha-galacturonosidase [EC:3.2.1.82]
D YE3889 def; polypeptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D YE0972 conserved hypothetical protein K03478 chbG; chitin disaccharide deacetylase [EC:3.5.1.105]
D YE1787 conserved hypothetical protein K09900 E3.5.1.135; N4-acetylcytidine amidohydrolase [EC:3.5.1.135]
D YE3768 conserved hypothetical protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D YE3675 conserved hypothetical protein K18446 ygiF; triphosphatase [EC:3.6.1.25]
D YE3125 putative haloacid dehalogenase-like hydrolase K11938 cof; HMP-PP phosphatase [EC:3.6.1.-]
D YE1161 conserved hypothetical protein K12945 nudK; GDP-mannose pyrophosphatase NudK [EC:3.6.1.-]
D YE1629 conserved hypothetical protein K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-]
D YE0006 conserved hypothetical protein K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D YE2502 putative class II aldolase-family protein K22130 otnC; 3-dehydro-4-phosphotetronate decarboxylase [EC:4.1.1.104]
D YE1979 mipB; putative transaldolase K08313 fsaA; fructose-6-phosphate aldolase 1 [EC:4.1.2.-]
D YE0372 conserved hypothetical protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D YE3209 hydroxy amino acid dehydratase K22589 thadh; threo-3-hydroxy-L-aspartate ammonia-lyase [EC:4.3.1.16]
D YE3303 putative aminotransferase class V K01766 csdA; cysteine sulfinate desulfinase [EC:4.4.1.-]
D YE1943 putative exported protein K17948 nanM; N-acetylneuraminate epimerase [EC:5.1.3.24]
D YE1092 gutQ; conserved hypothetical protein K02467 gutQ; arabinose 5-phosphate isomerase [EC:5.3.1.13]
D YE2501 conserved hypothetical protein K22131 otnI; 2-dehydrotetronate isomerase [EC:5.3.1.35]
D YE0411 mpl; UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-m eso-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D YE1990 putative integral membrane protein K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D YE1992 putative iron-sulfur binding NADH dehydrogenase K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D YE1993 putative iron-sulfur protein K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D YE3220 nqrA; NADH-ubiquinone oxidoreductase subunit A K00346 nqrA; Na+-transporting NADH:ubiquinone oxidoreductase subunit A [EC:7.2.1.1]
D YE3219 nqrB; NADH-ubiquinone oxidoreductase subunit B K00347 nqrB; Na+-transporting NADH:ubiquinone oxidoreductase subunit B [EC:7.2.1.1]
D YE3218 nqrC; Na+-translocating NADH-quinone reductase subunit C K00348 nqrC; Na+-transporting NADH:ubiquinone oxidoreductase subunit C [EC:7.2.1.1]
D YE3217 nqrD; Na+-translocating NADH-quinone reductase subunit D K00349 nqrD; Na+-transporting NADH:ubiquinone oxidoreductase subunit D [EC:7.2.1.1]
D YE3216 nqrE; Na+-translocating NADH-quinone reductase subunit E K00350 nqrE; Na+-transporting NADH:ubiquinone oxidoreductase subunit E [EC:7.2.1.1]
D YE3215 nqrF; NADH-uniquinone oxidoreductase subunit F K00351 nqrF; Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:7.2.1.1]
D YE0218 putative P-type cation-translocating membrane ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
D YE3776 mgtA; Mg2+ transporter ATPase K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14]
D YE2585 mgtB; Mg(2+) transport ATPase protein B K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14]
C 99981 Carbohydrate metabolism
D YE0726 sfsA; sugar fermentation stimulation protein K06206 sfsA; sugar fermentation stimulation protein A
D YE2733 pduG; putative propanediol utilization protein: diol dehydratase reactivation K27264 pduG; propanediol dehydratase-reactivating factor large subunit
D YE2734 pduH; putative propanediol utilization protein: diol dehydratase reactivation K27265 pduH; propanediol dehydratase-reactivating factor small subunit
C 99982 Energy metabolism
D YE4137 fdhD; putative formate dehydrogenase K02379 fdhD; FdhD protein
D YE1062 fdx; adrenodoxin family ferredoxin K04755 fdx; ferredoxin, 2Fe-2S
D YE1391 putative iron-sulphur binding protein K11107 yfaE; ferredoxin
D YE1989 putative exported protein K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D YE1988 putative membrane protein K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D YE1994 putative membrane protein K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D YE2809 hydN; 4Fe-4S ferrodoxin K05796 hydN; electron transport protein HydN
D YE0001 putative flavoprotein K06205 mioC; MioC protein
D YE3381 fldB; flavodoxin 2 K03840 fldB; flavodoxin II
D YE2805 hyfH; hydrogenase-4 component H K12143 hyfH; hydrogenase-4 component H
D YE1058 nifU; NifU family protein K04488 iscU; nitrogen fixation protein NifU and related proteins
D YE3788 putative cytochrome K15536 cybC; soluble cytochrome b562
D YE1155 napD; conserved hypothetical protein K02570 napD; periplasmic nitrate reductase NapD
D YE1154 napF; ferredoxin-type protein NapF K02572 napF; ferredoxin-type protein NapF
D YE2972 fldA; flavodoxin 1 K03839 fldA; flavodoxin I
D YE1158 napC; cytochrome C-type protein NapC K02569 napC; cytochrome c-type protein NapC
D YE1369 putative dehydrogenase, cytochrome C subunit K23275 fdhC; fructose 5-dehydrogenase cytochrome subunit
C 99983 Lipid metabolism
D YE0386 aidB; putative acyl-CoA dehydrogenase K09456 aidB; putative acyl-CoA dehydrogenase
C 99984 Nucleotide metabolism
D YE0928 nrdI; NrdI protein homologue K03647 nrdI; protein involved in ribonucleotide reduction
C 99985 Amino acid metabolism
D YE1209 cysZ; putative membrane protein K06203 cysZ; CysZ protein
D YE2746 pduV; conserved hypothetical protein K04029 eutP; ethanolamine utilization protein EutP
D YE2745 pduU; putative propanediol utilization protein K04031 eutS; ethanolamine utilization protein EutS
D YE3266 conserved hypothetical protein K08234 yaeR; glyoxylase I family protein
D YE2111 conserved hypothetical protein K14054 mpaA; murein peptide amidase A
D YE3433 conserved hypothetical protein K06997 yggS; PLP dependent protein
D YE0448 conserved hypothetical protein K26607 cyuA; putative L-cysteine desulfidase
C 99986 Glycan metabolism
D YE1967 putative membrane protein K08992 lapA; lipopolysaccharide assembly protein A
D YE1968 conserved hypothetical protein K19804 lapB; lipopolysaccharide assembly protein B
D YE4073 bcsB; cyclic di-gmp binding protein precursor K20541 bcsB; cellulose synthase operon protein B
C 99987 Cofactor metabolism
D YE0184 hemY; putative protoheme IX biogenesis protein K02498 hemY; HemY protein
D YE0258 aarF; ubiquinone biosynthesis protein K03688 ubiB; ubiquinone biosynthesis protein
D YE0257 conserved hypothetical protein K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ
D YE3671 conserved hypothetical protein K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK
D YE0451 putative lipid carrier protein K24843 ubiT; O2-independent ubiquinone biosynthesis accessory factor UbiT
D YE0016 mobB; probable molybdopterin-guanine dinucleotide biosynthesis protein B K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein
D YE2743 pduS; putative NADH dehydrogenase K27271 pduS; cobalamin reductase
C 99988 Secondary metabolism
D YE3654 sufI; putative cell division protein K04753 sufI; suppressor of ftsI
D YE4184 ssuE; putative NAD(P)H-dependent FMN reductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
C 99999 Others
D YE1611 putative membrane protein K15977 K15977; putative oxidoreductase
D YE3718 putative membrane protein K15977 K15977; putative oxidoreductase
D YE1144 conserved hypothetical protein K06999 K06999; phospholipase/carboxylesterase
D YE3247 yfiQ; putative acetyltransferase K09181 yfiQ; acetyltransferase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D YE1094 gutM; glucitol operon activator protein K02466 gutM; glucitol operon activator protein
D YE3791 putative ribonuclease inhibitor K03623 yhcO; ribonuclease inhibitor
D YE3821 cspA1; major cold shock protein CspA1 K03704 cspA; cold shock protein
D YE3823 cspA2; major cold shock protein K03704 cspA; cold shock protein
D YE3012 cspE1; cold shock-like protein cspE1 K03704 cspA; cold shock protein
D YE2590 cspC2; cold shock-like protein CspC2 K03704 cspA; cold shock protein
D YE1516 cspD; cold shock-like protein K03704 cspA; cold shock protein
D YE1547 cspE3; cold shock-like protein cspE3 K03704 cspA; cold shock protein
D YE1765 cspC1; cold shock-like protein cspC1 K03704 cspA; cold shock protein
D YE0940 cspG; cold shock-like protein cspG K03704 cspA; cold shock protein
D YE3822 cspA3; major cold shock protein CspA1 K03704 cspA; cold shock protein
D YE1546 cspE2; putative cold shock protein CspE2 K03704 cspA; cold shock protein
D YE0295 rsd; regulator of sigma D K07740 rsd; regulator of sigma D
D YE3120 glnK; nitrogen regulatory protein P-II K04752 glnK; nitrogen regulatory protein P-II 2
D YE4000 teX; putative transcription accessory protein K06959 tex; protein Tex
C 99974 Translation
C 99975 Protein processing
D YE1517 conserved hypothetical protein K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D YE3135 tig; Trigger factor K03545 tig; trigger factor
D YE3809 putative membrane protein K17247 msrQ; methionine sulfoxide reductase heme-binding subunit
D YE4132 fdhE; putative formate dehydrogenase formation protein K02380 fdhE; FdhE protein
D YE0954 ureE; urease accessory protein K03187 ureE; urease accessory protein
D YE0955 ureF; urease accessory protein K03188 ureF; urease accessory protein
D YE0956 ureG; urease accessory protein K03189 ureG; urease accessory protein
D YE0957 ureD; urease accessory protein K03190 ureD; urease accessory protein
D YE0994 smpB; SsrA-binding protein (small protein B) K03664 smpB; SsrA-binding protein
D YE2796 hypC; putative hydrogenase isoenzymes formation protein K04653 hypC; hydrogenase expression/formation protein HypC
D YE3602A hybG; hydrogenase-2 operon protein K04653 hypC; hydrogenase expression/formation protein HypC
D YE3602 hypD; hydrogenase isoenzymes formation protein K04654 hypD; hydrogenase expression/formation protein HypD
D YE3601 hypE; hydrogenase isoenzymes formation protein K04655 hypE; hydrogenase expression/formation protein HypE
D YE3600 hypF; hydrogenase maturation protein K04656 hypF; hydrogenase maturation protein HypF
D YE0929 nrdH; putative glutaredoxin K06191 nrdH; glutaredoxin-like protein NrdH
D YE0147 putative magnesium chelatase family protein K07391 comM; magnesium chelatase family protein
D YE3772 Hypothetical exported protein K07395 K07395; putative proteasome-type protease
D YE3337 conserved hypothetical protein K07396 K07396; putative protein-disulfide isomerase
D YE3954 conserved hypothetical protein K07397 yhfA; putative redox protein
D YE3993 conserved hypothetical protein K07400 nfuA; Fe/S biogenesis protein NfuA
C 99976 Replication and repair
D YE3116 putative 6-O-methylguanine DNA methyltransferase family protein K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein
D YE3297 xni; exodeoxyribonuclease IX K01146 xni; protein Xni
D YE0519 hypothetical protein K07454 K07454; putative restriction endonuclease
D YE0063 radC; putative DNA repair protein K03630 radC; DNA repair protein RadC
D YE0255 rumC; putative DNA recombination protein K09760 rmuC; DNA recombination protein RmuC
D YE1512 conserved hypothetical protein K07459 ybjD; putative ATP-dependent endonuclease of the OLD family
D YE3728 conserved hypothetical protein K07460 yraN; putative endonuclease
D YE0453 conserved hypothetical protein K07461 K07461; putative endonuclease
D YE3888 conserved hypothetical protein K04096 smf; DNA processing protein
D YE2070 gyrI; DNA gyrase inhibitory protein K07470 sbmC; DNA gyrase inhibitor
D YE2326 putative phage terminase, small subunit K07474 xtmA; phage terminase small subunit
D YE1527 putative ATPase protein K07478 ycaJ; putative ATPase
D YE3886 putative DNA-binding protein K07479 yrdD; putative DNA topoisomerase
D YE3040 transposase for insertion element IS3 K07483 K07483; transposase
D YE3249 insertion element IS1664 protein K07483 K07483; transposase
D YE0831 tnpA; IS1329 transposase A K07483 K07483; transposase
D YE1827 tnpA; IS1329 transposase A K07483 K07483; transposase
D YE2626 tnpA; IS1329 transposase A K07483 K07483; transposase
D YE3043 tnpA; IS1329 transposase A K07483 K07483; transposase
D YE3831 insertion element IS1664 protein K07483 K07483; transposase
D YE1590 insertion element IS1664 protein K07483 K07483; transposase
D YE1001 tnp; transposase for IS1541 K07491 rayT; REP-associated tyrosine transposase
D YE1694 tnp; transposase for IS1541 K07491 rayT; REP-associated tyrosine transposase
D YEP0094 tnp; transposase for IS1541 K07491 rayT; REP-associated tyrosine transposase
D YE0090 transposase for insertion sequence element IS1660 K07495 K07495; putative transposase
D YE0288 transposase for insertion sequence element IS1660 K07495 K07495; putative transposase
D YE0538 transposase for insertion sequence element IS1660 K07495 K07495; putative transposase
D YE1562 transposase for insertion sequence element IS1660 K07495 K07495; putative transposase
D YE2774 transposase for insertion sequence element IS1660 K07495 K07495; putative transposase
D YEP0092 transposase for insertion sequence element IS4 K07495 K07495; putative transposase
D YE0599 transposase for insertion sequence element IS1660 K07495 K07495; putative transposase
D YE1122 trp1400B; IS1400 transposase B K07497 K07497; putative transposase
D YE1810 Insertion element protein K07497 K07497; putative transposase
D YE1123 trp1400A; IS1400 transposase A K07497 K07497; putative transposase
D YE1811 transposase for insertion element IS1222 K07497 K07497; putative transposase
D YE2630 trp1400A; IS1400 transposase A K07497 K07497; putative transposase
D YE3877 hypothetical protein located on insertion sequence element IS1666 K07497 K07497; putative transposase
D YE1803 tnpB; transposase B K07497 K07497; putative transposase
D YE3044 tnpB; transposase B K07497 K07497; putative transposase
D YE2625 tnpB; transposase B K07497 K07497; putative transposase
D YEP0002 trp1400A; IS1400 transposase A K07497 K07497; putative transposase
D YE0832 tnpB; IS1329 transposase B K07497 K07497; putative transposase
D YE1591 putative transposase for IS1664 element K07497 K07497; putative transposase
D YE1826 tnpB; transposase B K07497 K07497; putative transposase
D YE2629 trp1400B; IS1400 transposase B K07497 K07497; putative transposase
D YE3525 Hypothetical protein K07497 K07497; putative transposase
D YE1822 trp1400A; IS1400 transposase A K07497 K07497; putative transposase
D YE1919 trp1400A; IS1400 transposase A K07497 K07497; putative transposase
D YE0305 putative transposase for insertion element IS1669 K07497 K07497; putative transposase
D YE1203 putative transposase for insertion element IS1669 K07497 K07497; putative transposase
D YE1736 putative transposase for insertion element IS1669 K07497 K07497; putative transposase
D YE3170 putative transposase for insertion element IS1669 K07497 K07497; putative transposase
D YE3292 putative transposase for insertion element IS1669 K07497 K07497; putative transposase
D YE2364 int; putative phage integrase K14059 int; integrase
C 99979 Viral proteins
C 99998 Others
D YE2121 pspA; phage shock protein A K03969 pspA; phage shock protein A
D YE3092 conserved hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D YE1262 putative inner membrane protein K21990 yfdC; formate-nitrite transporter family protein
D YE0181 putative permease protein K03293 TC.AAT; amino acid transporter, AAT family
D YE2133 putative proton dependent peptide transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D YE2391 putative peptide transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D YE1609 putative peptide transport protein K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D YE3179 brnQ; branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D YE0051 nupC; nucleoside permease K03317 TC.CNT; concentrative nucleoside transporter, CNT family
D YE0569 putative Na+ dependent nucleoside transporter-family protein K03317 TC.CNT; concentrative nucleoside transporter, CNT family
D YE3827 putative membrane transport protein K03319 TC.DASS; divalent anion:Na+ symporter, DASS family
D YE1478 TrkA, Potassium channel-family protein K07085 K07085; putative transport protein
D YE4162 yidE; putative membrane protein K07085 K07085; putative transport protein
C 99978 Cell growth
D YE2220 ispZ; putative intracellular septation protein K06190 ispZ; intracellular septation protein
D YE0215 dcrB; putative lipoprotein K27311 dcrB; inner membrane lipoprotein DcrB
D YE2282 conserved hypothetical protein K06415 spoVR; stage V sporulation protein R
D YE0076 putative membrane protein K22719 envC; murein hydrolase activator
C 99993 Cell motility
D YE1703 putative lipoprotein K07337 K07337; penicillin-binding protein activator
D YE1583 conserved hypothetical protein K07343 tfoX; DNA transformation protein and related proteins
D YE2694 putative pili chaperone protein K15540 ecpD; chaperone protein EcpD
D YE3294 syd; Syd protein K15723 syd; SecY interacting protein Syd
C 99995 Signaling proteins
D YE0693 ampE; putative membrane-bound sensory transducer in beta-lactamase regulation K03807 ampE; AmpE protein
D YE1867 proQ; ProP effector homologue K03607 proQ; ProP effector
D YE4050 uspA; universal stress protein A K06149 uspA; universal stress protein A
D YE2583 putative universal stress protein K14064 uspC; universal stress protein C
D YE2076 putative stress protein K14055 uspE; universal stress protein E
D YE1981 cstA; putative carbon starvation protein A K06200 cstA; carbon starvation protein
D YE0253 putative carbon starvation protein K06200 cstA; carbon starvation protein
D YE0029 bipA; putative GTPase K06207 typA; GTP-binding protein
D YE2986 conserved hypothetical protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D YE2478 phoH; putative phosphate starvation-inducible protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D YE2272 conserved hypothetical protein K07180 prkA; serine protein kinase
D YE3676 putative exported protein K07184 ygiM; SH3 domain protein
D YE0576 smp; putative membrane protein K07186 smp; membrane protein
D YE3147 conserved hypothetical protein K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D YE1526 lolA; putative outer-membrane lipoproteins carrier protein K03634 lolA; outer membrane lipoprotein carrier protein
D YE2433 putative lipoprotein K02494 lolB; outer membrane lipoprotein LolB
D YE1272 vacJ; VacJ lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA
D YE0170 wzzE; putative lipopolysaccharide biosynthesis protein K05790 wzzE; lipopolysaccharide biosynthesis protein WzzE
D YE2143 pcpY; outer membrane lipoprotein K06077 slyB; outer membrane lipoprotein SlyB
D YE3610 pcpY2; outer membrane lipoprotein K06077 slyB; outer membrane lipoprotein SlyB
D YE3275 ompH; cationic 19 kDa outer membrane protein precursor K06142 hlpA; outer membrane protein
D YE0774 nlpD; lipoprotein K06194 nlpD; lipoprotein NlpD
D YE2451 putative lipoprotein K12943 ygeR; lipoprotein YgeR
D YE0439 nlpI; lipoprotein NlpI K05803 nlpI; lipoprotein NlpI
D YE2216 ompW; putative exported protein K07275 ompW; outer membrane protein
D YE0847 ydiY; putative exported protein K07283 ydiY; putative salt-induced outer membrane protein
D YE2376 putative lipoprotein K07285 slp; outer membrane lipoprotein
D YE3138 yajG; putative lipoprotein K07286 yajG; uncharacterized lipoprotein
D YE2781 putative exported protein K07289 asmA; AsmA protein
D YE4062 putative exported protein K07290 yhjG; AsmA family protein
D YE3059 ybbJ; putative membrane protein K07340 ybbJ; inner membrane protein
D YE2824 putative exported protein K02005 ABC.CD.TX; HlyD family secretion protein
D YE1620 putative membrane protein K11744 tqsA; AI-2 transport protein TqsA
D YE1975 osmB; osmotically inducible lipoprotein B precursor K04062 osmB; osmotically inducible lipoprotein OsmB
D YE3382 creD; putative membrane protein K06143 creD; inner membrane protein
D YE1267 ccmE; putative cytochrome c-type biogenesis protein K02197 ccmE; cytochrome c-type biogenesis protein CcmE
D YE1270 ccmH; putative cytochrome c-type biogenesis protein K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D YE1072 yfgA; putative DNA-binding protein K15539 rodZ; cytoskeleton protein RodZ
D YE3796 putative membrane protein K21695 aaeX; protein AaeX
D YE3696 putative membrane protein K21908 hdeD; membrane protein HdeD
D YE2729 pduB; putative propanediol utilization protein K27263 pduB; bacterial microcompartment shell protein
D YE2735 pduA; putative propanediol utilization protein K27266 pduJ; bacterial microcompartment shell protein
D YE2736 pduK; putative propanediol utilization protein: polyhedral bodies K27267 pduK; bacterial microcompartment shell protein
D YE2738 pduM; putative propanediol utilization protein K27268 pduM; bacterial microcompartment assembly protein
D YE2739 pduN; putative propanediol utilization protein: polyhedral bodies K27269 pduN; bacterial microcompartment shell vertex protein
D YE2744 pduT; putative propanediol utilization protein: polyhedral bodies K27272 pduT; bacterial microcompartment shell protein
C 99994 Others
D YE4196 phoU; putative phosphate transport system protein K02039 phoU; phosphate transport system protein
D YE3926 bfd; putative bacterioferritin-associated ferredoxin K02192 bfd; bacterioferritin-associated ferredoxin
D YE1605 mdoG; osmoregulated periplasmic glucan biosynthetic protein K03670 mdoG; periplasmic glucans biosynthesis protein
D YE0349 putative cation tolerance protein K03926 cutA; periplasmic divalent cation tolerance protein
D YE2403 cutC; putative copper homeostasis protein K06201 cutC; copper homeostasis protein
D YE0473 phnK; phosphonates transport ATP-binding protein K05781 phnK; putative phosphonate transport system ATP-binding protein
D YE0629 apaG; ApaG protein homologue K06195 apaG; ApaG protein
D YE0190 cyaY; frataxin-like protein K06202 cyaY; iron-sulfur cluster assembly protein CyaY
D YE0330 hemS; hemin transport protein K07225 hmuS; putative hemin transport protein
D YE2181 hemS2; hemin transport protein K07225 hmuS; putative hemin transport protein
D YE0334 conserved hypothetical protein K07227 chuX; heme iron utilization protein
D YE3098 conserved hypothetical protein K06039 ychN; uncharacterized protein involved in oxidation of intracellular sulfur
B
B 09194 Poorly characterized
C 99996 General function prediction only
D YE1314 cvpA; putative colicin V production protein K03558 cvpA; membrane protein required for colicin V production
D YE1574 pqiB; putative paraquat-inducible protein B K06192 pqiB; paraquat-inducible protein B
D YE3251 putative exported protein K05811 yfiM; putative lipoprotein
D YE0565 osmY; osmotically inducible protein Y K04065 osmY; hyperosmotically inducible periplasmic protein
D YE2421 conserved hypothetical protein K04477 ycdX; putative hydrolase
D YE1003 conserved hypothetical protein K06866 grcA; autonomous glycyl radical cofactor
D YE2244 putative exported protein K07001 K07001; NTE family protein
D YE0736 conserved hypothetical protein K15724 erpA; iron-sulfur cluster insertion protein
D YE2172 conserved hypothetical protein K05997 sufA; Fe-S cluster assembly protein SufA
D YE2171 conserved hypothetical protein K09014 sufB; Fe-S cluster assembly protein SufB
D YE2169 conserved hypothetical protein K09015 sufD; Fe-S cluster assembly protein SufD
D YE1880 putative membrane protein K07038 K07038; inner membrane protein
D YE1042 putative hydrolase K07048 PTER; phosphotriesterase-related protein
D YE0031 rbn; ribonuclease BN K07058 K07058; membrane protein
D YE4060 putative membrane protein K07058 K07058; membrane protein
D YE0352 putative membrane protein K07113 fxsA; UPF0716 protein FxsA
D YE2167 conserved hypothetical protein K02426 sufE; cysteine desulfuration protein SufE
D YE3304 conserved hypothetical protein K02426 sufE; cysteine desulfuration protein SufE
D YE1619 conserved hypothetical protein K07146 K07146; UPF0176 protein
D YE1721 conserved hypothetical protein K07153 hflD; high frequency lysogenization protein
D YE3477 arsH; putative arsenic resistance protein K11811 arsH; arsenical resistance protein ArsH
D YE2486 putative ferric iron reductase K13255 fhuF; ferric iron reductase protein FhuF
D YE3936 conserved hypothetical protein K03745 slyX; SlyX protein
D YE3887 conserved hypothetical protein K03747 smg; Smg protein
D YE0594 creA; putative exported protein K05805 creA; CreA protein
D YE3424 conserved hypothetical protein K02742 sprT; SprT protein
D YE1313 dedD; putative membrane protein K03749 dedD; DedD protein
D YE3973 conserved hypothetical membrane protein K03112 damX; DamX protein
D YE2795 sanA; putative exported protein K03748 sanA; SanA protein
D YE1310 dedA; putative membrane protein K03975 dedA; membrane-associated protein
D YE1865 yebS; putative membrane protein K03808 pqiA; paraquat-inducible protein A
D YE1573 pqiA; putative paraquat-inducible protein A K03808 pqiA; paraquat-inducible protein A
D YE1371 elaB; putative membrane protein K05594 elaB; ElaB protein
D YE2117 putative membrane protein K08990 ycjF; putative membrane protein
D YE0223 yhhL; putative membrane protein K08993 yhhL; putative membrane protein
D YE2246 conserved hypothetical protein K09858 K09858; SEC-C motif domain protein
D YE3117 ybaY; putative lipoprotein K09914 K09914; putative lipoprotein
D YE3861 malM; maltose operon periplasmic protein K05775 malM; maltose operon periplasmic protein
D YE3869 putative membrane protein K13256 psiE; protein PsiE
D YE1260 conserved hypothetical protein K06193 phnA; protein PhnA
C 99997 Function unknown
D YE1006 yplB; putative phospholipase A accessory protein K06867 K06867; uncharacterized protein
D YE1698 conserved hypothetical protein K06871 K06871; uncharacterized protein
D YE2826 putative heme-binding protein K06871 K06871; uncharacterized protein
D YE0388 conserved hypothetical protein K06889 K06889; uncharacterized protein
D YE3023 conserved hypothetical protein K06889 K06889; uncharacterized protein
D YE2895 putative membrane protein K06890 K06890; uncharacterized protein
D YE1665 gpW; baseplate assembly protein K06903 W; Bacteriophage baseplate protein W
D YE1644 gpD; regulator of late gene expression K06905 D; Bacteriophage probable baseplate hub protein
D YE1650 gpU; putative phage tail protein K06906 gpU; phage tail protein
D YE1645 fI; major tail sheath protein K06907 FI; Bacteriophage tail sheath protein
D YE1646 fII; major tail tube protein K06908 FII; Bacteriophage tail tube protein
D YE2118 conserved hypothetical protein K06918 K06918; uncharacterized protein
D YE1589 conserved hypothetical protein K06929 K06929; uncharacterized protein
D YE2149 conserved hypothetical protein K06938 K06938; uncharacterized protein
D YE1443 conserved hypothetical protein K06940 K06940; uncharacterized protein
D YE2216A conserved hypothetical protein K06940 K06940; uncharacterized protein
D YE1879 gltP; putative transport protein K06956 K06956; uncharacterized protein
D YE2039 conserved hypothetical protein K06987 K06987; uncharacterized protein
D YE2134 conserved hypothetical protein K06996 K06996; uncharacterized protein
D YE3661 conserved hypothetical protein K07000 K07000; uncharacterized protein
D YE1706 conserved hypothetical protein K07000 K07000; uncharacterized protein
D YE2990 conserved hypothetical protein K07006 K07006; uncharacterized protein
D YE1419 putative membrane protein K07014 K07014; uncharacterized protein
D YE3951 conserved hypothetical protein K07019 K07019; uncharacterized protein
D YE0608 yaaH; putative membrane protein K07034 K07034; uncharacterized protein
D YE1141 putative membrane protein K07054 K07054; uncharacterized protein
D YE3939 conserved hypothetical protein K07070 K07070; uncharacterized protein
D YE1323 conserved hypothetical protein K07071 K07071; uncharacterized protein
D YE3479 putative membrane transport protein K07089 K07089; uncharacterized protein
D YE3446 putative membrane protein K07090 K07090; uncharacterized protein
D YE1283 yfcA; putative membrane protein K07090 K07090; uncharacterized protein
D YE1325 conserved hypothetical protein K07095 K07095; uncharacterized protein
D YE0401 putative exported protein K07109 K07109; uncharacterized protein
D YE3422 probable membrane protein K07112 K07112; uncharacterized protein
D YE3422A probable membrane protein K07112 K07112; uncharacterized protein
D YE3727 putative exported protein K07121 K07121; uncharacterized protein
D YE2671 hypothetical protein K07124 K07124; uncharacterized protein
D YE2400 putative membrane protein K07136 K07136; uncharacterized protein
D YE3734 conserved hypothetical protein K07139 K07139; uncharacterized protein
D YE1570 putative iron-sulfur binding protein K07140 K07140; MOSC domain-containing protein
D YE2817 yeiB; putative exported protein K07148 K07148; uncharacterized protein
D YE1909 putative inner membrane protein K07150 K07150; uncharacterized protein
D YE3436 conserved hypothetical protein K09131 K09131; uncharacterized protein
D YE3006 conserved hypothetical protein K09158 K09158; uncharacterized protein
D YE2365 conserved hypothetical protein K09160 K09160; uncharacterized protein
D YE1336 conserved hypothetical protein K09161 K09161; uncharacterized protein
D YE1167 conserved hypothetical protein K09768 K09768; uncharacterized protein
D YE2223 conserved hypothetical protein K09780 K09780; uncharacterized protein
D YE2273 conserved hypothetical protein K09786 K09786; uncharacterized protein
D YE3094A putative membrane protein K09790 K09790; uncharacterized protein
D YE1549 conserved hypothetical protein K09791 K09791; uncharacterized protein
D YE0075 putative exported protein K09798 K09798; uncharacterized protein
D YE0996 conserved hypothetical protein K09801 K09801; uncharacterized protein
D YE2755 conserved hypothetical protein K09802 K09802; uncharacterized protein
D YE3403 yggE; putative exported protein K09807 K09807; uncharacterized protein
D YE1513 putative virulence factor K09824 virK; uncharacterized protein
D YE3213 putative exported protein K05952 K05952; uncharacterized protein
D YE1575 putative lipoprotein protein K09857 K09857; uncharacterized protein
D YE0603 conserved hypothetical protein K09861 K09861; uncharacterized protein
D YE0683 conserved hypothetical protein K09862 K09862; uncharacterized protein
D YE0299 conserved hypothetical protein K09891 K09891; uncharacterized protein
D YE0023 conserved hypothetical protein K09894 K09894; uncharacterized protein
D YE3397 putative exported protein K09895 K09895; uncharacterized protein
D YE0018 conserved hypothetical protein K09896 K09896; uncharacterized protein
D YE0146 conserved hypothetical protein K09897 K09897; uncharacterized protein
D YE3952 conserved hypothetical protein K09898 K09898; uncharacterized protein
D YE1335 conserved hypothetical protein K09899 K09899; uncharacterized protein
D YE2228 conserved hypothetical protein K09901 K09901; uncharacterized protein
D YE2368 conserved hypothetical protein K09902 K09902; uncharacterized protein
D YE1420 conserved hypothetical protein K09904 K09904; uncharacterized protein
D YE2404 conserved hypothetical protein K09907 K09907; uncharacterized protein
D YE3743 putative membrane protein K09908 K09908; uncharacterized protein
D YE1588 putative exported protein K09909 K09909; uncharacterized protein
D YE0706 conserved hypothetical protein K09910 K09910; uncharacterized protein
D YE1580 conserved hypothetical protein K09911 K09911; uncharacterized protein
D YE2637 conserved hypothetical protein K09912 K09912; uncharacterized protein
D YE2263 conserved hypothetical protein K09916 K09916; uncharacterized protein
D YE1782 conserved hypothetical protein K09917 K09917; uncharacterized protein
D YE1786 conserved hypothetical protein K09918 K09918; uncharacterized protein
D YE3663 conserved hypothetical protein K09920 K09920; uncharacterized protein
D YE0193 conserved hypothetical protein K09921 K09921; uncharacterized protein
D YE3441 conserved hypothetical protein K09923 K09923; uncharacterized protein
D YE0381 putative membrane protein K09937 K09937; uncharacterized protein
D YE1103 conserved hypothetical protein K09946 K09946; uncharacterized protein
D YE1212 conserved hypothetical protein K09954 K09954; uncharacterized protein
D YE1214 conserved hypothetical protein K09962 K09962; uncharacterized protein
D YE0806 conserved hypothetical protein K09967 K09967; uncharacterized protein
D YE3062 conserved hypothetical protein K09973 K09973; uncharacterized protein
D YE2458 conserved hypothetical protein K09975 K09975; uncharacterized protein
D YE2095 putative exported protein K09978 K09978; uncharacterized protein
D YE0465 conserved hypothetical protein K09979 K09979; uncharacterized protein
!
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 6, 2024