+D GENES KO
#
KEGG Orthology (KO) - Clostridium botulinum A3 Loch Maree
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:cbl00010]
D CLK_1066 putative glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CLK_2695 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CLK_2805 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CLK_2002 glpX; fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D CLK_3727 fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D CLK_3372 fba; fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CLK_3410 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CLK_3408 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CLK_0538 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00150 gap2; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) [EC:1.2.1.59]
D CLK_3409 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D CLK_3411 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D CLK_3412 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CLK_2804 pykA; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CLK_2326 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D CLK_1097 acoC; TPP-dependent acetoin dehydrogenase complex, E2 component, dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D CLK_0101 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CLK_1098 acoL; TPP-dependent acetoin dehydrogenase complex, E3 component, dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CLK_0631 pyruvate ferredoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D CLK_2145 pyruvate ferredoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D CLK_2866 putative 2-oxoacid:acceptor oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D CLK_2865 putative 2-oxoacid:acceptor oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D CLK_0997 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CLK_3533 adhE; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D CLK_0542 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CLK_2509 phosphoglucomutase/phosphomannomutase family protein K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CLK_3103 phosphoglucomutase/phosphomannomutase family protein K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CLK_0693 gapN; glyceraldehyde-3-phosphate dehydrogenase (NADP+) K00131 gapN; glyceraldehyde-3-phosphate dehydrogenase (NADP+) [EC:1.2.1.9]
D CLK_2776 glycosyl hydrolase, family 4 K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D CLK_0640 putative beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D CLK_3458 PTS system, glucose family, EIIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CLK_3483 PTS system, glucose family, IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CLK_3466 PTS system, glucose/glucoside family, IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CLK_3455 PTS system, maltose/glucose-specfic, IIBC component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D CLK_3481 PTS system, glucose/maltose-specfic, IIBC component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D CLK_0770 ptsG; PTS system, glucose-specific, IIABC component K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D CLK_2139 PTS system, glucose family, IIABC component K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
C 00020 Citrate cycle (TCA cycle) [PATH:cbl00020]
D CLK_3619 HMGL-related enzyme K05942 E2.3.3.3; citrate (Re)-synthase [EC:2.3.3.3]
D CLK_3620 putative aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D CLK_3621 dehydrogenase, isocitrate/isopropylmalate family K00030 IDH3; isocitrate dehydrogenase (NAD+) [EC:1.1.1.41]
D CLK_0101 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CLK_1098 acoL; TPP-dependent acetoin dehydrogenase complex, E3 component, dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CLK_2866 putative 2-oxoacid:acceptor oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D CLK_2865 putative 2-oxoacid:acceptor oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D CLK_2864 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D CLK_2867 putative 2-oxoacid:acceptor oxidoreductase, delta subunit K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D CLK_2885 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha region K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D CLK_2884 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta region K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D CLK_2728 pyc; pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D CLK_1097 acoC; TPP-dependent acetoin dehydrogenase complex, E2 component, dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D CLK_0631 pyruvate ferredoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D CLK_2145 pyruvate ferredoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
C 00030 Pentose phosphate pathway [PATH:cbl00030]
D CLK_2695 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CLK_0040 hypothetical protein K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]
D CLK_1884 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D CLK_2826 transketolase, pyridine binding subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CLK_2827 transketolase, thiamine diphosphate binding subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CLK_1611 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D CLK_0735 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D CLK_3319 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D CLK_1039 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D CLK_1040 rbsK; ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D CLK_2509 phosphoglucomutase/phosphomannomutase family protein K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CLK_3103 phosphoglucomutase/phosphomannomutase family protein K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CLK_3013 prsA; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D CLK_3485 eda; 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D CLK_0693 gapN; glyceraldehyde-3-phosphate dehydrogenase (NADP+) K00131 gapN; glyceraldehyde-3-phosphate dehydrogenase (NADP+) [EC:1.2.1.9]
D CLK_3486 kinase, pfkB family K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D CLK_1393 aor; aldehyde ferredoxin oxidoreductase, tungsten-containing K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5]
D CLK_3372 fba; fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CLK_2002 glpX; fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D CLK_3727 fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D CLK_2805 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:cbl00040]
D CLK_2507 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CLK_1884 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D CLK_2861 putative L-iditol 2-dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D CLK_0713 araD; L-ribulose-5-phosphate 4-epimerase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
C 00051 Fructose and mannose metabolism [PATH:cbl00051]
D CLK_3603 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D CLK_3277 putative mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D CLK_0713 araD; L-ribulose-5-phosphate 4-epimerase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D CLK_2805 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CLK_2002 glpX; fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D CLK_3727 fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D CLK_2856 srlD; sorbitol-6-phosphate 2-dehydrogenase K00068 srlD; sorbitol-6-phosphate 2-dehydrogenase [EC:1.1.1.140]
D CLK_1145 pfkB; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D CLK_2861 putative L-iditol 2-dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D CLK_3372 fba; fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CLK_3410 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CLK_0423 dhaKL; dihydroxyacetone kinase, DhaK/DhaL subunit K00863 DAK; triose/dihydroxyacetone kinase / FAD-AMP lyase (cyclizing) [EC:2.7.1.28 2.7.1.29 4.6.1.15]
D CLK_3319 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D CLK_2857 PTS system, glucitol/sorbitol-specific, IIA component K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D CLK_2858 PTS system, glucitol/sorbitol-specific, IIBC component K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D CLK_2859 PTS system, glucitol/sorbitol-specific, IIC component K02783 srlA; glucitol/sorbitol PTS system EIIC component
C 00052 Galactose metabolism [PATH:cbl00052]
D CLK_2164 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CLK_2066 NAD-dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CLK_1548 NAD-dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CLK_2507 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CLK_2509 phosphoglucomutase/phosphomannomutase family protein K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CLK_3103 phosphoglucomutase/phosphomannomutase family protein K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CLK_1066 putative glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CLK_2072 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D CLK_2805 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CLK_1446 class II aldolase, tagatose bisphosphate family K08302 gatY-kbaY; tagatose 1,6-diphosphate aldolase GatY/KbaY [EC:4.1.2.40]
D CLK_1067 glycosyl hydrolase, family 13 K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
C 00053 Ascorbate and aldarate metabolism [PATH:cbl00053]
D CLK_1610 putative PTS system, L-ascorbate family, IIA component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D CLK_1609 putative PTS system, L-Ascorbate family, IIB component K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D CLK_1608 putative PTS system, L-ascorbate family, IIC component K03475 ulaA; ascorbate PTS system EIIC component
D CLK_0542 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00500 Starch and sucrose metabolism [PATH:cbl00500]
D CLK_0788 phosphotransferase system domain protein K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D CLK_1067 glycosyl hydrolase, family 13 K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D CLK_2507 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CLK_2772 PTS system, lactose/cellobiose-specific family, IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D CLK_2773 PTS system, lactose/cellobiose-specific family, IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D CLK_2775 PTS system, lactose/cellobiose family, IIC component K02761 celB; cellobiose PTS system EIIC component
D CLK_2776 glycosyl hydrolase, family 4 K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D CLK_0640 putative beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D CLK_3458 PTS system, glucose family, EIIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CLK_3483 PTS system, glucose family, IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CLK_3466 PTS system, glucose/glucoside family, IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CLK_3455 PTS system, maltose/glucose-specfic, IIBC component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D CLK_3481 PTS system, glucose/maltose-specfic, IIBC component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D CLK_1068 PTS system, glucose/glucoside family, IIBC component K20108 malT; maltose PTS system EIICB or EIICBA component [EC:2.7.1.208]
D CLK_3464 PTS system, glucose/glucoside family, IIBC component K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-]
D CLK_1069 endonuclease/exonuclease/phosphatase family protein K06896 mapP; maltose 6'-phosphate phosphatase [EC:3.1.3.90]
D CLK_3465 glvA; maltose-6'-phosphate glucosidase K01232 glvA; maltose-6'-phosphate glucosidase [EC:3.2.1.122]
D CLK_3482 glvA; maltose-6'-phosphate glucosidase K01232 glvA; maltose-6'-phosphate glucosidase [EC:3.2.1.122]
D CLK_1440 treP; PTS system, trehalose-specific IIBC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D CLK_1441 treC; alpha,alpha-phosphotrehalase K01226 treC; trehalose-6-phosphate hydrolase [EC:3.2.1.93]
D CLK_2509 phosphoglucomutase/phosphomannomutase family protein K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CLK_3103 phosphoglucomutase/phosphomannomutase family protein K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CLK_1066 putative glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CLK_2695 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:cbl00520]
D CLK_1006 chiA; chitinase A K01183 E3.2.1.14; chitinase [EC:3.2.1.14]
D CLK_2220 glycosyl hydrolase, family 18 K01183 E3.2.1.14; chitinase [EC:3.2.1.14]
D CLK_0525 putative glycosyl hydrolase K01183 E3.2.1.14; chitinase [EC:3.2.1.14]
D CLK_0144 glycosyl hydrolase, family 18 K01183 E3.2.1.14; chitinase [EC:3.2.1.14]
D CLK_3458 PTS system, glucose family, EIIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CLK_3483 PTS system, glucose family, IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CLK_3466 PTS system, glucose/glucoside family, IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CLK_2226 nagE; PTS system, N-acetylglucosamine-specific, IIBC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D CLK_2222 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D CLK_2221 nagB; glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D CLK_2853 glmS; glutamine-fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CLK_2863 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D CLK_3014 glmU; UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D CLK_0787 murQ; N-acetylmuramic acid 6-phosphate etherase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D CLK_3334 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CLK_3035 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CLK_2810 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CLK_3323 mnaA; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D CLK_2502 UDP-glucose/GDP-mannose dehydrogenase family K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136]
D CLK_2501 oxidoreductase, NAD-binding Rossmann fold family K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335]
D CLK_0236 putative pleiotropic regulatory protein DegT K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
D CLK_2494 UDP-N-acetylglucosamine 2-epimerase K13019 wbpI; UDP-GlcNAc3NAcA epimerase [EC:5.1.3.23]
D CLK_2105 sialic acid synthase K15898 pseI; pseudaminic acid synthase [EC:2.5.1.97]
D CLK_2100 UDP-N-acetylglucosamine 2-epimerase K18429 legG; GDP/UDP-N,N'-diacetylbacillosamine 2-epimerase (hydrolysing) [EC:3.2.1.184]
D CLK_2101 spore coat polysaccharide biosynthesis protein SpsE K18430 legI; N,N'-diacetyllegionaminate synthase [EC:2.5.1.101]
D CLK_3455 PTS system, maltose/glucose-specfic, IIBC component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D CLK_3481 PTS system, glucose/maltose-specfic, IIBC component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D CLK_0770 ptsG; PTS system, glucose-specific, IIABC component K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D CLK_2139 PTS system, glucose family, IIABC component K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D CLK_1066 putative glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CLK_2509 phosphoglucomutase/phosphomannomutase family protein K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CLK_3103 phosphoglucomutase/phosphomannomutase family protein K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CLK_2507 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CLK_2164 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CLK_2066 NAD-dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CLK_1548 NAD-dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CLK_2072 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D CLK_2695 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CLK_3603 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D CLK_3277 putative mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D CLK_2097 spore coat polysaccharide biosynthesis protein SpsC K13010 per; perosamine synthetase [EC:2.6.1.102]
C 00620 Pyruvate metabolism [PATH:cbl00620]
D CLK_0631 pyruvate ferredoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D CLK_2145 pyruvate ferredoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D CLK_2866 putative 2-oxoacid:acceptor oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D CLK_2865 putative 2-oxoacid:acceptor oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D CLK_1097 acoC; TPP-dependent acetoin dehydrogenase complex, E2 component, dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D CLK_0101 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CLK_1098 acoL; TPP-dependent acetoin dehydrogenase complex, E3 component, dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CLK_2613 pfl; formate acetyltransferase 1 K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D CLK_1561 eutE; acetaldehyde dehydrogenase (acetylating) K00132 E1.2.1.10; acetaldehyde dehydrogenase (acetylating) [EC:1.2.1.10]
D CLK_3533 adhE; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D CLK_1836 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D CLK_1837 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CLK_2804 pykA; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CLK_3067 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D CLK_3071 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CLK_3069 accC; acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CLK_3068 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D CLK_0542 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CLK_0449 putative glycolate oxidase K26113 lctD; lactate dehydrogenase (NAD+,ferredoxin) subunit LctD [EC:1.1.1.436]
D CLK_0448 electron transfer flavoprotein, alpha subunit/FixB family protein K26114 lctC; lactate dehydrogenase (NAD+,ferredoxin) subunit LctC
D CLK_0447 electron transfer flavoprotein, beta subunit/FixA family protein K26115 lctB; lactate dehydrogenase (NAD+,ferredoxin) subunit LctB
D CLK_0997 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CLK_2699 ldhA; D-lactate dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
D CLK_0430 oxidoreductase, aldo/keto reductase family K23257 yvgN; methylglyoxal/glyoxal reductase [EC:1.1.1.283 1.1.1.-]
D CLK_0026 putative lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D CLK_1011 glyoxalase family protein K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D CLK_2450 metallo-beta-lactamase family protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D CLK_0446 conserved hypothetical protein K22373 larA; lactate racemase [EC:5.1.2.1]
D CLK_1196 conserved hypothetical protein K22373 larA; lactate racemase [EC:5.1.2.1]
D CLK_1472 conserved hypothetical protein K22373 larA; lactate racemase [EC:5.1.2.1]
D CLK_3389 malate dehydrogenase (oxaloacetate-decarboxylating) K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D CLK_2728 pyc; pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D CLK_2885 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha region K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D CLK_2884 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta region K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D CLK_2326 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D CLK_2598 thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:cbl00630]
D CLK_3620 putative aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D CLK_2598 thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CLK_2255 catalase K03781 katE; catalase [EC:1.11.1.6]
D CLK_3033 putative glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CLK_1980 glyA; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CLK_0099 gcvPA; glycine cleavage system P protein, subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D CLK_0100 gcvPB; glycine cleavage system P protein, subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D CLK_0097 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D CLK_0101 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CLK_1098 acoL; TPP-dependent acetoin dehydrogenase complex, E3 component, dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CLK_0098 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D CLK_1596 AP endonuclease, family 2 K01816 hyi; hydroxypyruvate isomerase [EC:5.3.1.22]
D CLK_3485 eda; 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D CLK_0281 oxdD; oxalate decarboxylase K01569 oxdD; oxalate decarboxylase [EC:4.1.1.2]
C 00640 Propanoate metabolism [PATH:cbl00640]
D CLK_1836 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D CLK_1837 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CLK_0101 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CLK_1098 acoL; TPP-dependent acetoin dehydrogenase complex, E3 component, dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CLK_2613 pfl; formate acetyltransferase 1 K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D CLK_2597 bcd; butyryl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D CLK_3067 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D CLK_3071 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CLK_3069 accC; acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CLK_3068 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D CLK_0997 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CLK_0424 dhaD; glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
D CLK_1452 glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
D CLK_0430 oxidoreductase, aldo/keto reductase family K23257 yvgN; methylglyoxal/glyoxal reductase [EC:1.1.1.283 1.1.1.-]
C 00650 Butanoate metabolism [PATH:cbl00650]
D CLK_2598 thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CLK_2599 hbd; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D CLK_2600 crt; 3-hydroxybutyryl-CoA dehydratase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D CLK_2597 bcd; butyryl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D CLK_2238 CoA-transferase, A subunit K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D CLK_2239 CoA-transferase, B subunit K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D CLK_2869 buk; butyrate kinase K00929 buk; butyrate kinase [EC:2.7.2.7]
D CLK_2871 buk_2; butyrate kinase K00929 buk; butyrate kinase [EC:2.7.2.7]
D CLK_2870 ptb; phosphate butyryltransferase K00634 ptb; phosphate butyryltransferase [EC:2.3.1.19]
D CLK_2513 phosphate acetyl/butyryl transferase K00634 ptb; phosphate butyryltransferase [EC:2.3.1.19]
D CLK_1561 eutE; acetaldehyde dehydrogenase (acetylating) K00132 E1.2.1.10; acetaldehyde dehydrogenase (acetylating) [EC:1.2.1.10]
D CLK_3533 adhE; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D CLK_0850 bdhA; NADH-dependent butanol dehydrogenase K00100 bdhAB; butanol dehydrogenase [EC:1.1.1.-]
D CLK_1372 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D CLK_2613 pfl; formate acetyltransferase 1 K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D CLK_0631 pyruvate ferredoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D CLK_2145 pyruvate ferredoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D CLK_2866 putative 2-oxoacid:acceptor oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D CLK_2865 putative 2-oxoacid:acceptor oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D CLK_1657 oxidoreductase, zinc-binding dehydrogenase family K00004 BDH; (R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.4 1.1.1.- 1.1.1.303]
C 00660 C5-Branched dibasic acid metabolism
C 00562 Inositol phosphate metabolism [PATH:cbl00562]
D CLK_2020 putative phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
D CLK_3410 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:cbl00190]
D CLK_1234 putative iron hydrogenase, gamma subunit K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D CLK_1233 putative iron hydrogenase, electron-transfer subunit K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D CLK_1232 iron hydrogenase 1 K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D CLK_3329 atpA; ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D CLK_3331 atpD; ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D CLK_3330 atpG; ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D CLK_3328 atpH; ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D CLK_3332 atpC; ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D CLK_3325 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D CLK_3327 atpF; ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D CLK_3326 atpE; ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D CLK_2011 ntpA; V-type sodium ATPase, catalytic A subunit K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1]
D CLK_2010 ntpB; V-type sodium ATPase, B subunit K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B
D CLK_2013 ntpC; V-type sodium ATPase, C subunit K02119 ATPVC; V/A-type H+/Na+-transporting ATPase subunit C
D CLK_2009 ntpD; V-type sodium ATPase, D subunit K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D
D CLK_2014 ntpE; V-type sodium ATPase, E subunit K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E
D CLK_2012 ntpG; V-type sodium ATPase, G subunit K02122 ATPVF; V/A-type H+/Na+-transporting ATPase subunit F
D CLK_2017 putative V-type ATPase subunit K02107 ATPVG; V/A-type H+/Na+-transporting ATPase subunit G/H
D CLK_2016 ntpI; V-type sodium ATPase, I subunit K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I
D CLK_2015 ntpK; V-type sodium ATPase, K subunit K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K
D CLK_2023 putative manganese-dependent inorganic pyrophosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:cbl00680]
D CLK_1658 carbon monoxide dehydrogenase K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4]
D CLK_0775 carbon monoxide dehydrogenase K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4]
D CLK_0776 nitrate reductase, iron-sulfur subunit K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit
D CLK_1980 glyA; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CLK_3412 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CLK_0423 dhaKL; dihydroxyacetone kinase, DhaK/DhaL subunit K00863 DAK; triose/dihydroxyacetone kinase / FAD-AMP lyase (cyclizing) [EC:2.7.1.28 2.7.1.29 4.6.1.15]
D CLK_3372 fba; fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CLK_2002 glpX; fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D CLK_3727 fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D CLK_2805 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CLK_1133 formylmethanofuran dehydrogenase E subunit-related protein K11261 fwdE; formylmethanofuran dehydrogenase subunit E [EC:1.2.7.12]
D CLK_1836 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D CLK_1837 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CLK_3411 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D CLK_0567 D-isomer specific 2-hydroxyacid dehydrogenase family protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CLK_0975 mtbC; dimethylamine corrinoid protein K16179 mtbC; dimethylamine corrinoid protein
D CLK_3023 putative 2-phosphosulfolactate phosphatase K05979 comB; 2-phosphosulfolactate phosphatase [EC:3.1.3.71]
C 00910 Nitrogen metabolism [PATH:cbl00910]
D CLK_0091 nifH; nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH
D CLK_2177 hcp; hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1]
D CLK_3079 oxidoreductase, 2-nitropropane dioxygenase family K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D CLK_1192 gluD; glutamate dehydrogenase, NAD-specific K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D CLK_3033 putative glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CLK_2720 gltA; glutamate synthase (NADPH), homotetrameric K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D CLK_1109 gltA; glutamate synthase (NADPH), homotetrameric K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D CLK_1979 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D CLK_0963 hypothetical protein K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:cbl00920]
D CLK_1792 DHH family protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D CLK_0395 asrA; sulfite reductase, subunit A K16950 asrA; anaerobic sulfite reductase subunit A
D CLK_0396 asrB; sulfite reductase, subunit B K16951 asrB; anaerobic sulfite reductase subunit B
D CLK_0397 arsC; anaerobic sulfite reductase, subunit C K00385 asrC; anaerobic sulfite reductase subunit C
D CLK_0201 rhodanese domain protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D CLK_3385 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D CLK_0140 cysteine synthase family protein K01738 cysK; cysteine synthase [EC:2.5.1.47]
D CLK_3384 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D CLK_0614 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D CLK_1264 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:cbl00061]
D CLK_3067 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D CLK_3071 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CLK_3069 accC; acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CLK_3068 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D CLK_1832 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D CLK_3076 acyl carrier protein K02078 acpP; acyl carrier protein
D CLK_3074 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D CLK_3077 fabH; 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CLK_0132 3-oxoacyl-[acyl-carrier-protein] synthase III, homolog K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CLK_3072 fabF; beta-ketoacyl-acyl-carrier-protein synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CLK_3713 oxidoreductase, short chain dehydrogenase/reductase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CLK_3073 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CLK_3070 fabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D CLK_3075 oxidoreductase, 2-nitropropane dioxygenase family K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D CLK_1969 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:cbl00071]
D CLK_2598 thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CLK_2597 bcd; butyryl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D CLK_1969 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CLK_3533 adhE; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D CLK_0542 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:cbl00561]
D CLK_0542 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CLK_0423 dhaKL; dihydroxyacetone kinase, DhaK/DhaL subunit K00863 DAK; triose/dihydroxyacetone kinase / FAD-AMP lyase (cyclizing) [EC:2.7.1.28 2.7.1.29 4.6.1.15]
D CLK_0424 dhaD; glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
D CLK_1452 glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
D CLK_2169 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D CLK_1833 plsX; fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D CLK_3387 plsD; glycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CLK_3618 putative 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CLK_2332 diacylglycerol kinase/PAP2 family protein K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D CLK_0280 lipA; triacylglycerol lipase K01046 lip; triacylglycerol lipase [EC:3.1.1.3]
D CLK_1515 triacylglycerol lipase K01046 lip; triacylglycerol lipase [EC:3.1.1.3]
D CLK_3302 conserved hypothetical protein K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D CLK_2258 sulfatase family protein K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
D CLK_3800 sulfatase family protein K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
C 00564 Glycerophospholipid metabolism [PATH:cbl00564]
D CLK_1902 NAD-dependent glycerol-3-phosphate dehydrogenase family protein K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D CLK_0513 FAD-dependent oxidoreductase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D CLK_1685 oxidoreductase, FAD/[2Fe-2S]-binding K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D CLK_3387 plsD; glycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CLK_3618 putative 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CLK_2332 diacylglycerol kinase/PAP2 family protein K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D CLK_2020 putative phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
D CLK_2314 glycerophosphoryl diester phosphodiesterase family protein K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D CLK_0629 glycerophosphoryl diester phosphodiesterase family protein K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D CLK_2609 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D CLK_1806 cdsA; phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D CLK_3377 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D CLK_3158 psd; phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D CLK_0464 CDP-alcohol phosphatidyltransferase family protein K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D CLK_1781 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D CLK_2061 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism
D CLK_2020 putative phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
C 00600 Sphingolipid metabolism [PATH:cbl00600]
D CLK_0638 O-glycosyl hydrolase, family 30 K01201 GBA; glucosylceramidase [EC:3.2.1.45]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
D CLK_2293 lipase/acylhydrolase, GDSL family K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:cbl00230]
D CLK_1255 hydrolase, NUDIX family K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D CLK_3677 hydrolase, NUDIX family K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D CLK_2509 phosphoglucomutase/phosphomannomutase family protein K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CLK_3103 phosphoglucomutase/phosphomannomutase family protein K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CLK_3013 prsA; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D CLK_2272 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D CLK_2304 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D CLK_2268 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D CLK_2270 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D CLK_1965 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D CLK_2271 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D CLK_2274 purE; phosphoribosylaminoimidazole carboxylase, catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D CLK_2273 purC; phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D CLK_1771 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D CLK_2269 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CLK_2453 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D CLK_1459 phosphoribosyl transferase domain protein K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D CLK_3415 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D CLK_1250 punA; purine nucleoside phosphorylase I, inosine and guanosine-specific K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D CLK_2579 conserved hypothetical protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D CLK_1912 conserved hypothetical protein TIGR00726 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D CLK_2474 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D CLK_2990 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D CLK_2712 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D CLK_2678 non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D CLK_3506 xpt; xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D CLK_0579 xpt; xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D CLK_0727 putative xanthine dehydrogenase, molybdopterin-binding subunit K00087 ygeS; xanthine dehydrogenase molybdenum-binding subunit [EC:1.17.1.4]
D CLK_0728 putative xanthine dehydrogenase, FAD-binding subunit K13479 ygeT; xanthine dehydrogenase FAD-binding subunit [EC:1.17.1.4]
D CLK_0729 putative xanthine dehydrogenase, iron-sulfur binding subunit K13480 ygeU; xanthine dehydrogenase iron-sulfur-binding subunit
D CLK_2711 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D CLK_0730 guaD; guanine deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3]
D CLK_A0185 putative guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D CLK_1896 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D CLK_2201 nrdA; ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CLK_2200 nrdB; ribonucleoside-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D CLK_3268 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D CLK_2324 deoxynucleotide triphosphohydrolase family protein K01129 dgt; dGTPase [EC:3.1.5.1]
D CLK_2452 putative GTP diphosphokinase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D CLK_3362 RelA/SpoT domain protein K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D CLK_3370 putative adenylyl cyclase CyaB K05873 cyaB; adenylate cyclase, class 2 [EC:4.6.1.1]
D CLK_3100 purA; adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D CLK_0436 add; adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4]
D CLK_3488 ade; adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2]
D CLK_2903 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D CLK_2288 conserved hypothetical protein K06928 NTPCR; nucleoside-triphosphatase [EC:3.6.1.15]
D CLK_1979 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00240 Pyrimidine metabolism [PATH:cbl00240]
D CLK_2108 ATP-grasp domain protein K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CLK_1227 carB; carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CLK_1228 carA; carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D CLK_2639 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D CLK_2638 pyrI; aspartate carbamoyltransferase, regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D CLK_2637 pyrC; dihydroorotase, multifunctional complex type K01465 URA4; dihydroorotase [EC:3.5.2.3]
D CLK_2634 pyrD; dihydroorotate oxidase K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D CLK_2635 pyrK; dihydroorotate dehydrogenase, electron transfer subunit K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D CLK_2633 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D CLK_2636 pyrF; orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D CLK_1809 pyrH; UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D CLK_2388 maf; septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D CLK_3307 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D CLK_1189 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D CLK_1939 udk; uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D CLK_3375 putative threonyl-tRNA synthetase/uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D CLK_3415 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D CLK_2579 conserved hypothetical protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D CLK_3320 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D CLK_0958 pyrR; pyrimidine operon regulatory protein/uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D CLK_2208 pyrR; pyrimidine operon regulatory protein/uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D CLK_0603 kinase, PfkB family K16328 psuK; pseudouridine kinase [EC:2.7.1.83]
D CLK_0604 indigoidine synthase A family protein K16329 psuG; pseudouridylate synthase [EC:4.2.1.70]
D CLK_1249 pdp; pyrimidine-nucleoside phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2]
D CLK_2331 cdd; cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D CLK_2793 cytidine/deoxycytidylate deaminase family protein K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D CLK_3268 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D CLK_2201 nrdA; ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CLK_2200 nrdB; ribonucleoside-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D CLK_3321 cytidine/deoxycytidylate deaminase family protein K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D CLK_3231 putative thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D CLK_0676 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D CLK_3311 tdk; thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D CLK_0176 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D CLK_2946 thyX; thymidylate synthase, flavin-dependent K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D CLK_2207 pyridine nucleotide-disulphide oxidoreductase family protein K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1]
D CLK_2206 dihydroorotate dehydrogenase family protein K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
D CLK_2280 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:cbl00250]
D CLK_1774 aspB; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CLK_1185 aspB; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CLK_0457 pyridoxal-phosphate-dependent aminotransferase family K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D CLK_0929 putative L-aspartate oxidase NadB K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D CLK_1899 ansA; L-asparaginase, type II K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D CLK_0983 asnA; aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D CLK_1203 hydrolase, carbon-nitrogen family K13566 NIT2; omega-amidase [EC:3.5.1.3]
D CLK_0601 aminotransferase, classes I and II K09758 asdA; aspartate 4-decarboxylase [EC:4.1.1.12]
D CLK_2058 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CLK_2057 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CLK_3100 purA; adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D CLK_1771 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D CLK_2639 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D CLK_2638 pyrI; aspartate carbamoyltransferase, regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D CLK_1372 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D CLK_2720 gltA; glutamate synthase (NADPH), homotetrameric K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D CLK_1109 gltA; glutamate synthase (NADPH), homotetrameric K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D CLK_1192 gluD; glutamate dehydrogenase, NAD-specific K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D CLK_3033 putative glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CLK_2108 ATP-grasp domain protein K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CLK_1227 carB; carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CLK_1228 carA; carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D CLK_2195 glsA; glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D CLK_2853 glmS; glutamine-fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CLK_2272 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D CLK_2304 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:cbl00260]
D CLK_2754 lysC; aspartate kinase 2 K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CLK_1104 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CLK_1785 dapG; aspartate kinase 1 K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CLK_2548 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CLK_1105 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CLK_1265 homoserine dehydrogenase family protein K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CLK_1103 thrB; homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D CLK_0421 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D CLK_1102 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D CLK_1673 putative threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D CLK_1980 glyA; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CLK_3411 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D CLK_0567 D-isomer specific 2-hydroxyacid dehydrogenase family protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CLK_0635 amine oxidase, flavin-containing K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D CLK_0099 gcvPA; glycine cleavage system P protein, subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D CLK_0100 gcvPB; glycine cleavage system P protein, subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D CLK_0097 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D CLK_0101 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CLK_1098 acoL; TPP-dependent acetoin dehydrogenase complex, E3 component, dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CLK_0098 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D CLK_3377 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D CLK_0657 sdhB; L-serine dehydratase, iron-sulfur-dependent, beta subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D CLK_0658 sdhA; L-serine dehydratase, iron-sulfur-dependent, alpha subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D CLK_2949 ilvA; threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
C 00270 Cysteine and methionine metabolism [PATH:cbl00270]
D CLK_3385 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D CLK_0140 cysteine synthase family protein K01738 cysK; cysteine synthase [EC:2.5.1.47]
D CLK_3384 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D CLK_0614 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D CLK_0142 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CLK_0842 hemolysin K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CLK_1087 putative 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D CLK_3346 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D CLK_2779 speD; S-adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D CLK_0952 mtnN; MTA/SAH nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D CLK_0707 mtnK; S-methyl-5-thioribose kinase K00899 mtnK; 5-methylthioribose kinase [EC:2.7.1.100]
D CLK_1912 conserved hypothetical protein TIGR00726 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D CLK_0708 mtnA; S-methyl-5-thioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D CLK_3163 megL; methionine gamma-lyase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D CLK_2300 conserved hypothetical protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D CLK_A0203 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D CLK_0141 luxS; S-ribosylhomocysteinase LuxS K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D CLK_2754 lysC; aspartate kinase 2 K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CLK_1104 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CLK_1785 dapG; aspartate kinase 1 K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CLK_2548 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CLK_1105 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CLK_1265 homoserine dehydrogenase family protein K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CLK_1264 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D CLK_1266 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase family protein K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D CLK_2141 aminotransferase, class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CLK_1774 aspB; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CLK_1185 aspB; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CLK_0457 pyridoxal-phosphate-dependent aminotransferase family K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D CLK_0201 rhodanese domain protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D CLK_0997 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CLK_0601 aminotransferase, classes I and II K09758 asdA; aspartate 4-decarboxylase [EC:4.1.1.12]
D CLK_0657 sdhB; L-serine dehydratase, iron-sulfur-dependent, beta subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D CLK_0658 sdhA; L-serine dehydratase, iron-sulfur-dependent, alpha subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D CLK_0567 D-isomer specific 2-hydroxyacid dehydrogenase family protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
C 00280 Valine, leucine and isoleucine degradation [PATH:cbl00280]
D CLK_2141 aminotransferase, class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CLK_0101 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CLK_1098 acoL; TPP-dependent acetoin dehydrogenase complex, E3 component, dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CLK_2597 bcd; butyryl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D CLK_0542 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CLK_2598 thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:cbl00290]
D CLK_2949 ilvA; threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D CLK_3484 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D CLK_2141 aminotransferase, class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00300 Lysine biosynthesis [PATH:cbl00300]
D CLK_1105 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CLK_1265 homoserine dehydrogenase family protein K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CLK_2754 lysC; aspartate kinase 2 K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CLK_1104 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CLK_1785 dapG; aspartate kinase 1 K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CLK_2548 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CLK_2549 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CLK_0200 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D CLK_2550 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D CLK_2552 putative 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D CLK_2760 putative dipeptidase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D CLK_1367 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D CLK_2753 lysA; diaminopimelate decarboxilase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D CLK_1183 aminotransferase, classes I and II K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D CLK_0938 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CLK_0939 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:cbl00310]
D CLK_0101 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CLK_1098 acoL; TPP-dependent acetoin dehydrogenase complex, E3 component, dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CLK_2598 thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CLK_2238 CoA-transferase, A subunit K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D CLK_2239 CoA-transferase, B subunit K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D CLK_0542 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:cbl00220]
D CLK_1978 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D CLK_2058 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CLK_2057 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CLK_3242 arcA; arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6]
D CLK_1054 arcA; arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6]
D CLK_2195 glsA; glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D CLK_3033 putative glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CLK_1192 gluD; glutamate dehydrogenase, NAD-specific K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D CLK_1979 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D CLK_1774 aspB; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CLK_1185 aspB; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CLK_0457 pyridoxal-phosphate-dependent aminotransferase family K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
C 00330 Arginine and proline metabolism [PATH:cbl00330]
D CLK_2846 putative creatinine amidohydrolase K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10]
D CLK_2511 Orn/Lys/Arg decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D CLK_0321 peptidyl-arginine deiminase, Porphyromonas-type K10536 aguA; agmatine deiminase [EC:3.5.3.12]
D CLK_2779 speD; S-adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D CLK_0542 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CLK_1390 bltD; spermine/spermidine acetyltransferase K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57]
D CLK_0609 acetyltransferase, GNAT family K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57]
D CLK_0635 amine oxidase, flavin-containing K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D CLK_2580 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D CLK_0333 ornithine cyclodeaminase (OCD) K01750 E4.3.1.12; ornithine cyclodeaminase [EC:4.3.1.12]
D CLK_1485 prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D CLK_1546 alpha/beta hydrolase family protein K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D CLK_2581 formate acetyltransferase K23121 pflD; trans-4-hydroxy-L-proline dehydratase [EC:4.2.1.172]
D CLK_1774 aspB; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CLK_1185 aspB; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CLK_0457 pyridoxal-phosphate-dependent aminotransferase family K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D CLK_1855 prdF; proline racemase K01777 prdF; proline racemase [EC:5.1.1.4]
D CLK_1843 prdA; D-proline reductase, PrdA proprotein K10793 prdA; D-proline reductase (dithiol) PrdA [EC:1.21.4.1]
D CLK_1861 prdA; D-proline reductase, PrdA proprotein K10793 prdA; D-proline reductase (dithiol) PrdA [EC:1.21.4.1]
D CLK_3050 glycine/sarcosine/betaine reductase, component B, subunits alpha and beta K10793 prdA; D-proline reductase (dithiol) PrdA [EC:1.21.4.1]
D CLK_1840 prdB; D-proline reductase, PrdB subunit, selenocysteine-containing K10794 prdB; D-proline reductase (dithiol) PrdB [EC:1.21.4.1]
D CLK_1858 putative D-proline reductase, PrdB subunit, selenocysteine-containing K10794 prdB; D-proline reductase (dithiol) PrdB [EC:1.21.4.1]
D CLK_3048 prdB-2; D-proline reductase, PrdB subunit K10794 prdB; D-proline reductase (dithiol) PrdB [EC:1.21.4.1]
C 00340 Histidine metabolism [PATH:cbl00340]
D CLK_1956 hisJ; histidinol-phosphatase K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15]
D CLK_0542 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CLK_0635 amine oxidase, flavin-containing K00274 MAO; monoamine oxidase [EC:1.4.3.4]
C 00350 Tyrosine metabolism [PATH:cbl00350]
D CLK_1774 aspB; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CLK_1185 aspB; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CLK_0457 pyridoxal-phosphate-dependent aminotransferase family K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D CLK_0635 amine oxidase, flavin-containing K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D CLK_3533 adhE; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D CLK_2700 D-lactate dehydrogenase K23109 fldH; aromatic 2-oxoacid reductase [EC:1.1.1.110]
C 00360 Phenylalanine metabolism [PATH:cbl00360]
D CLK_0635 amine oxidase, flavin-containing K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D CLK_2599 hbd; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D CLK_1774 aspB; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CLK_1185 aspB; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CLK_0457 pyridoxal-phosphate-dependent aminotransferase family K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D CLK_2561 acetyltransferase, GNAT family K03825 aaaT; L-phenylalanine/L-methionine N-acetyltransferase [EC:2.3.1.53 2.3.1.-]
D CLK_2700 D-lactate dehydrogenase K23109 fldH; aromatic 2-oxoacid reductase [EC:1.1.1.110]
D CLK_1618 enr; 2-enoate reductase K10797 enr; 2-enoate reductase [EC:1.3.1.31]
C 00380 Tryptophan metabolism [PATH:cbl00380]
D CLK_0101 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CLK_1098 acoL; TPP-dependent acetoin dehydrogenase complex, E3 component, dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CLK_2598 thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CLK_0635 amine oxidase, flavin-containing K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D CLK_0542 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CLK_2700 D-lactate dehydrogenase K23109 fldH; aromatic 2-oxoacid reductase [EC:1.1.1.110]
D CLK_2255 catalase K03781 katE; catalase [EC:1.11.1.6]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:cbl00400]
D CLK_0953 aroF; 3-deoxy-7-phosphoheptulonate synthase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D CLK_1597 putative 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D CLK_0951 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D CLK_1288 aroQ; 3-dehydroquinate dehydratase, type II K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D CLK_1289 aroK; shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D CLK_0954 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D CLK_2398 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D CLK_1190 aroH; chorismate mutase K06208 aroH; chorismate mutase [EC:5.4.99.5]
D CLK_2394 putative ACT domain protein K06209 pheB; chorismate mutase [EC:5.4.99.5]
D CLK_1774 aspB; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CLK_1185 aspB; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CLK_0457 pyridoxal-phosphate-dependent aminotransferase family K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:cbl00410]
D CLK_3625 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D CLK_1372 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D CLK_0542 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CLK_3626 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D CLK_2207 pyridine nucleotide-disulphide oxidoreductase family protein K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1]
D CLK_2206 dihydroorotate dehydrogenase family protein K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
D CLK_2280 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D CLK_2597 bcd; butyryl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
C 00430 Taurine and hypotaurine metabolism [PATH:cbl00430]
D CLK_1372 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D CLK_1192 gluD; glutamate dehydrogenase, NAD-specific K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D CLK_1837 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CLK_1836 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism [PATH:cbl00440]
D CLK_1504 2-aminoethylphosphonate--pyruvate transaminase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]
D CLK_0057 PHP domain protein K20859 phnPP; phosphoribosyl 1,2-cyclic phosphate 1,2-diphosphodiesterase [EC:3.1.4.57]
C 00450 Selenocompound metabolism [PATH:cbl00450]
D CLK_0142 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CLK_0842 hemolysin K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CLK_1087 putative 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D CLK_3163 megL; methionine gamma-lyase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D CLK_2876 oxidoreductase, pyridine nucleotide-disulphide family K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D CLK_0694 putative thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D CLK_0699 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D CLK_2278 putative selenate reductase, YgfK subunit K12527 ygfK; putative selenate reductase [EC:1.97.1.9]
D CLK_2361 selD; selenide, water dikinase, selenocysteine-containing K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D CLK_2360 selA; L-seryl-tRNA selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D CLK_3251 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:cbl00460]
D CLK_1899 ansA; L-asparaginase, type II K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D CLK_0983 asnA; aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D CLK_1980 glyA; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:cbl00470]
D CLK_2830 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CLK_3463 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CLK_1123 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CLK_3656 ddlB; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CLK_2195 glsA; glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D CLK_3032 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D CLK_2981 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D CLK_1367 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D CLK_2753 lysA; diaminopimelate decarboxilase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D CLK_1428 alanine racemase, N-terminal domain protein K21898 orr; ornithine racemase [EC:5.1.1.12]
D CLK_1456 alanine racemase, N-terminal domain protein K21898 orr; ornithine racemase [EC:5.1.1.12]
D CLK_1855 prdF; proline racemase K01777 prdF; proline racemase [EC:5.1.1.4]
D CLK_1843 prdA; D-proline reductase, PrdA proprotein K10793 prdA; D-proline reductase (dithiol) PrdA [EC:1.21.4.1]
D CLK_1861 prdA; D-proline reductase, PrdA proprotein K10793 prdA; D-proline reductase (dithiol) PrdA [EC:1.21.4.1]
D CLK_3050 glycine/sarcosine/betaine reductase, component B, subunits alpha and beta K10793 prdA; D-proline reductase (dithiol) PrdA [EC:1.21.4.1]
D CLK_1840 prdB; D-proline reductase, PrdB subunit, selenocysteine-containing K10794 prdB; D-proline reductase (dithiol) PrdB [EC:1.21.4.1]
D CLK_1858 putative D-proline reductase, PrdB subunit, selenocysteine-containing K10794 prdB; D-proline reductase (dithiol) PrdB [EC:1.21.4.1]
D CLK_3048 prdB-2; D-proline reductase, PrdB subunit K10794 prdB; D-proline reductase (dithiol) PrdB [EC:1.21.4.1]
C 00480 Glutathione metabolism [PATH:cbl00480]
D CLK_1672 pepD; aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D CLK_2264 pepD; aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D CLK_0829 pepD; aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
D CLK_0638 O-glycosyl hydrolase, family 30 K01201 GBA; glucosylceramidase [EC:3.2.1.45]
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis [PATH:cbl00542]
D CLK_3322 tagO; undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:cbl00541]
D CLK_2507 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CLK_2164 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CLK_2066 NAD-dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CLK_1548 NAD-dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CLK_2072 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D CLK_1511 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CLK_1512 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D CLK_3603 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D CLK_3277 putative mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D CLK_2097 spore coat polysaccharide biosynthesis protein SpsC K13010 per; perosamine synthetase [EC:2.6.1.102]
D CLK_3014 glmU; UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D CLK_3323 mnaA; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D CLK_2105 sialic acid synthase K15898 pseI; pseudaminic acid synthase [EC:2.5.1.97]
D CLK_2502 UDP-glucose/GDP-mannose dehydrogenase family K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136]
D CLK_2501 oxidoreductase, NAD-binding Rossmann fold family K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335]
D CLK_0236 putative pleiotropic regulatory protein DegT K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
D CLK_2494 UDP-N-acetylglucosamine 2-epimerase K13019 wbpI; UDP-GlcNAc3NAcA epimerase [EC:5.1.3.23]
C 00550 Peptidoglycan biosynthesis [PATH:cbl00550]
D CLK_3334 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CLK_3035 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CLK_2810 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CLK_3017 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D CLK_2981 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D CLK_0938 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CLK_3656 ddlB; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CLK_0939 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D CLK_1807 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CLK_0771 undecaprenyl pyrophosphate synthetase homolog K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CLK_3605 uppP; undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CLK_3509 uppP; undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CLK_2840 PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CLK_3538 PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CLK_0940 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CLK_0304 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CLK_2146 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D CLK_2476 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CLK_A0017 penicillin-binding protein, 1A family K18770 pbpD; penicillin-binding protein 4 [EC:2.4.99.28 3.4.16.4]
D CLK_2383 penicillin-binding protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D CLK_0937 stage V sporulation protein D K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
D CLK_2815 penicillin-binding protein K05364 pbpA; penicillin-binding protein A
D CLK_1245 dacF; serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CLK_1239 putative serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CLK_2363 D-alanyl-D-alanine carboxypeptidase family protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CLK_0847 D-alanyl-D-alanine carboxypeptidase family protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CLK_0478 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D CLK_0007 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D CLK_3602 UDP-N-acetylmuramyl tripeptide synthetase homolog K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
D CLK_3601 glutamine amidotransferase, CobB/CobQ family K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
C 00552 Teichoic acid biosynthesis [PATH:cbl00552]
D CLK_3605 uppP; undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CLK_3509 uppP; undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CLK_2840 PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CLK_3538 PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CLK_3322 tagO; undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D CLK_2486 glycosyl transferase, WecB/TagA/CpsF family K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D CLK_2366 putative cell envelope-related function transcriptional attenuator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D CLK_2077 cell envelope-related transcriptional attenuator domain protein K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D CLK_3302 conserved hypothetical protein K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D CLK_2258 sulfatase family protein K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
D CLK_3800 sulfatase family protein K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:cbl00543]
D CLK_3322 tagO; undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D CLK_2439 membrane-bound O-acyltransferase family protein K19294 algI; alginate O-acetyltransferase complex protein AlgI
D CLK_3385 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:cbl00730]
D CLK_2303 thiC; thiamine biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D CLK_3654 thiD; phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D CLK_0179 thiD; phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D CLK_0617 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CLK_1953 nifS; cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CLK_3056 putative thiazole biosynthesis protein K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19]
D CLK_1271 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D CLK_3653 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D CLK_1695 putative hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D CLK_3652 thiE; thiamine-phosphate diphosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D CLK_2288 conserved hypothetical protein K06928 NTPCR; nucleoside-triphosphatase [EC:3.6.1.15]
D CLK_1885 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D CLK_1883 thiamine diphosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D CLK_2903 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D CLK_0178 thiamine pyridinylase I K10811 E2.5.1.2; thiamine pyridinylase [EC:2.5.1.2]
C 00740 Riboflavin metabolism [PATH:cbl00740]
D CLK_2261 ribAB; bifunctional riboflavin biosynthesis protein RibAB K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D CLK_2263 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D CLK_2260 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D CLK_2262 ribE; riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D CLK_1790 ribF; riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D CLK_3653 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D CLK_1695 putative hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D CLK_1255 hydrolase, NUDIX family K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D CLK_3677 hydrolase, NUDIX family K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:cbl00750]
D CLK_0831 pyridoxine kinase family protein K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D CLK_0421 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D CLK_1102 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D CLK_2187 pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
D CLK_2186 pdxT; pyridoxal 5'-phosphate synthase, glutaminase subunit Pdx2 K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:cbl00760]
D CLK_0929 putative L-aspartate oxidase NadB K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D CLK_0930 nadA; quinolinate synthetase complex, A subunit K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D CLK_0928 nadC; nicotinate-nucleotide diphosphorylase (carboxylating) K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D CLK_0853 putative nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D CLK_1250 punA; purine nucleoside phosphorylase I, inosine and guanosine-specific K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D CLK_3415 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D CLK_2368 nadD; nicotinate nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D CLK_3171 hydrolase, NUDIX family K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D CLK_3747 nadE; glutamine-dependent NAD(+) synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D CLK_0574 pncA family protein K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D CLK_3223 NAD-dependent deacetylase, Sir2 family K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D CLK_1269 ppnK; ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
C 00770 Pantothenate and CoA biosynthesis [PATH:cbl00770]
D CLK_3484 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D CLK_3627 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D CLK_0605 panE; 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D CLK_3626 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D CLK_2987 coaX; pantothenate kinase, type III K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D CLK_1894 coaBC; phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D CLK_1875 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D CLK_2396 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D CLK_2833 acpS; holo-(acyl-carrier-protein) synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D CLK_1977 hypothetical protein K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D CLK_2141 aminotransferase, class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CLK_2207 pyridine nucleotide-disulphide oxidoreductase family protein K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1]
D CLK_2206 dihydroorotate dehydrogenase family protein K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
D CLK_2280 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D CLK_3625 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D CLK_0542 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:cbl00780]
D CLK_3072 fabF; beta-ketoacyl-acyl-carrier-protein synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CLK_3713 oxidoreductase, short chain dehydrogenase/reductase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CLK_3073 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CLK_3070 fabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D CLK_1701 bioD; dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D CLK_1702 bioB; biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D CLK_3055 radical SAM domain protein K01012 bioB; biotin synthase [EC:2.8.1.6]
D CLK_0559 birA; birA bifunctional protein K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:cbl00785]
D CLK_0102 putative lipoate-protein ligase A K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D CLK_1099 putative lipoate-protein ligase A K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D CLK_0101 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CLK_1098 acoL; TPP-dependent acetoin dehydrogenase complex, E3 component, dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CLK_1097 acoC; TPP-dependent acetoin dehydrogenase complex, E2 component, dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D CLK_0099 gcvPA; glycine cleavage system P protein, subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D CLK_0100 gcvPB; glycine cleavage system P protein, subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D CLK_0097 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D CLK_0098 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:cbl00790]
D CLK_1035 folE; GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D CLK_0232 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K13940 sulD; dihydroneopterin aldolase / 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:4.1.2.25 2.7.6.3]
D CLK_0230 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D CLK_2559 folC; FolC bifunctional protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D CLK_2261 ribAB; bifunctional riboflavin biosynthesis protein RibAB K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D CLK_0229 queD; queuosine biosynthesis protein QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D CLK_1033 queD; queuosine biosynthesis protein QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D CLK_1034 radical SAM domain protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D CLK_1036 exsB protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D CLK_0508 metallo-beta-lactamase family protein K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105]
D CLK_3733 metallo-beta-lactamase family protein K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105]
D CLK_1397 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D CLK_1396 moaC; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D CLK_1400 mog; molybdopterin biosynthesis enzyme Mog K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D CLK_1398 putative molybdopterin biosynthesis enzyme MoeA / molybdate binding domain K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D CLK_1399 moeA; molybdopterin biosynthesis enzyme MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D CLK_2285 conserved hypothetical protein K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76]
D CLK_2240 conserved hypothetical protein K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76]
C 00670 One carbon pool by folate [PATH:cbl00670]
D CLK_2988 fhs; formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D CLK_0607 folD; methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D CLK_0606 putative methenyltetrahydrofolate cyclohydrolase K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9]
D CLK_1980 glyA; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CLK_2270 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D CLK_2269 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CLK_1891 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D CLK_2099 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D CLK_0097 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D CLK_1087 putative 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D CLK_0176 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D CLK_2946 thyX; thymidylate synthase, flavin-dependent K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D CLK_1085 metF; methylenetetrahydrofolate reductase (NAD(P)H) K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D CLK_1992 5-formyltetrahydrofolate cyclo-ligase family protein K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:cbl00860]
D CLK_0360 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D CLK_0358 hemC; hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D CLK_1684 uroporphyrinogen decarboxylase family protein K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D CLK_0466 conserved hypothetical protein K00230 hemG; menaquinone-dependent protoporphyrinogen oxidase [EC:1.3.5.3]
D CLK_0359 cobA_hemD; uroporphyrinogen III synthase/methyltransferase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
D CLK_0357 precorrin-2 dehydrogenase K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76]
D CLK_0390 cbiK; anaerobic sirohydrochlorin cobaltochelatase K02190 cbiK; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D CLK_0384 cobI; precorrin-2 C(20)-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151]
D CLK_0387 cobJ; precorrin-3B C(17)-methyltransferase K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272]
D CLK_0385 cobM; precorrin-4 C(11)-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D CLK_0386 CbiG K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12]
D CLK_0388 cobK; precorrin-6x reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106]
D CLK_0373 cbiD; cobalamin biosynthesis protein CbiD K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195]
D CLK_0376 cbiT; precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit K02191 cbiT; cobalt-precorrin-6B (C15)-methyltransferase [EC:2.1.1.196]
D CLK_0374 cbiE; precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit K03399 cbiE; cobalt-precorrin-7 (C5)-methyltransferase [EC:2.1.1.289]
D CLK_0363 cobH; precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D CLK_0361 cobB; cobyrinic acid a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D CLK_0392 cobO; cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D CLK_0351 cobQ; cobyric acid synthase CobQ K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D CLK_0352 cobD; cobalamin biosynthesis protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D CLK_0347 cobU; cobinamide kinase / cobinamide phosphate guanyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D CLK_0222 cobS; cobalamin 5'-phosphate synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D CLK_0220 cobC; alpha-ribazole phosphatase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D CLK_0391 putative kinase K16651 pduX; L-threonine kinase [EC:2.7.1.177]
D CLK_0353 aminotransferase family protein K04720 cobD; threonine-phosphate decarboxylase [EC:4.1.1.81]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:cbl00900]
D CLK_1271 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D CLK_1802 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D CLK_2951 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D CLK_3296 ispE; 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D CLK_3243 ispF; 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D CLK_1800 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D CLK_1188 4-hydroxy-3-methylbut-2-enyl diphosphate reductase / ribosomal protein S1 homolog K02945 RP-S1; small subunit ribosomal protein S1
D CLK_2598 thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CLK_0204 isopentenyl-diphosphate delta-isomerase family protein K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D CLK_1273 putative geranyltranstransferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D CLK_1807 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CLK_0771 undecaprenyl pyrophosphate synthetase homolog K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
D CLK_0542 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D CLK_2826 transketolase, pyridine binding subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CLK_2827 transketolase, thiamine diphosphate binding subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:cbl00523]
D CLK_1511 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CLK_1512 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
D CLK_1512 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis
C 00261 Monobactam biosynthesis [PATH:cbl00261]
D CLK_2754 lysC; aspartate kinase 2 K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CLK_1104 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CLK_1785 dapG; aspartate kinase 1 K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CLK_2548 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CLK_2549 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CLK_0200 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D CLK_2550 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:cbl00521]
D CLK_1066 putative glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CLK_2509 phosphoglucomutase/phosphomannomutase family protein K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CLK_3103 phosphoglucomutase/phosphomannomutase family protein K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CLK_1511 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CLK_1512 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D CLK_1066 putative glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:cbl00525]
D CLK_1511 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CLK_1512 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis
D CLK_1774 aspB; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CLK_1185 aspB; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CLK_0457 pyridoxal-phosphate-dependent aminotransferase family K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
C 00333 Prodigiosin biosynthesis
D CLK_3074 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D CLK_3713 oxidoreductase, short chain dehydrogenase/reductase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CLK_3073 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D CLK_1832 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D CLK_3076 acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites
D CLK_3346 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
C 00997 Biosynthesis of various other secondary metabolites
D CLK_1428 alanine racemase, N-terminal domain protein K21898 orr; ornithine racemase [EC:5.1.1.12]
D CLK_1456 alanine racemase, N-terminal domain protein K21898 orr; ornithine racemase [EC:5.1.1.12]
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:cbl00362]
D CLK_2599 hbd; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D CLK_2598 thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation
D CLK_2238 CoA-transferase, A subunit K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D CLK_2239 CoA-transferase, B subunit K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:cbl00625]
D CLK_3533 adhE; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D CLK_0542 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CLK_0091 nifH; nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH
D CLK_0467 HAD superfamily (subfamily IA) hydrolase, TIGR02254 K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
D CLK_0287 HAD superfamily (subfamily IA) hydrolase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00361 Chlorocyclohexane and chlorobenzene degradation
D CLK_0467 HAD superfamily (subfamily IA) hydrolase, TIGR02254 K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
D CLK_0287 HAD superfamily (subfamily IA) hydrolase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation [PATH:cbl00633]
D CLK_1223 hupL; [Ni/Fe] hydrogenase, large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D CLK_1224 hupS; [Ni/Fe] hydrogenase, small subunit K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
D CLK_1658 carbon monoxide dehydrogenase K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4]
D CLK_0775 carbon monoxide dehydrogenase K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4]
D CLK_0776 nitrate reductase, iron-sulfur subunit K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:cbl00626]
D CLK_3533 adhE; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:cbl03020]
D CLK_2932 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CLK_2931 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CLK_A0222 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D CLK_2895 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D CLK_1895 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
D CLK_3723 putative ATP-dependent helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:cbl03010]
D CLK_A0291 ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D CLK_0594 rpsA; ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D CLK_1188 4-hydroxy-3-methylbut-2-enyl diphosphate reductase / ribosomal protein S1 homolog K02945 RP-S1; small subunit ribosomal protein S1
D CLK_1812 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D CLK_2918 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D CLK_2838 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D CLK_2896 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D CLK_2907 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D CLK_3112 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D CLK_2928 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D CLK_2910 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D CLK_2888 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D CLK_2925 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D CLK_2897 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D CLK_2929 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D CLK_2898 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D CLK_2911 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D CLK_1789 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D CLK_1825 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D CLK_2915 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D CLK_3110 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D CLK_2920 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D CLK_2352 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D CLK_2338 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D CLK_2935 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D CLK_2921 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D CLK_2924 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D CLK_2923 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D CLK_2912 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D CLK_2909 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D CLK_2933 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D CLK_3106 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D CLK_2934 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D CLK_2936 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D CLK_2889 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D CLK_2914 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D CLK_2905 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D CLK_2917 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D CLK_2894 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D CLK_2908 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D CLK_1821 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D CLK_2527 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D CLK_2373 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D CLK_2919 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D CLK_2922 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D CLK_2913 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D CLK_2510 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D CLK_2615 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D CLK_2371 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D CLK_1880 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D CLK_2916 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D CLK_2906 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D CLK_3310 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D CLK_1834 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D CLK_2939 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D CLK_3132 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D CLK_2528 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D CLK_2899 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D CLK_2930 ribosomal protein L7Ae family protein K07590 RP-L7A; large subunit ribosomal protein L7A
D CLK_3867 rrs; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLK_3846 rrs; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLK_3949 rrs; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLK_3830 rrs; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLK_3834 rrs; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLK_3838 rrs; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLK_3842 rrs; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLK_3816 rrs; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLK_3954 rrs; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLK_3847 rrl; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLK_3817 rrl; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLK_3843 rrl; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLK_3839 rrl; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLK_3870 rrl; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLK_3953 rrl; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLK_3947 rrl; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLK_3835 rrl; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLK_3831 rrl; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLK_3832 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLK_3848 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLK_3844 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLK_3836 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLK_3840 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLK_3946 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLK_3818 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLK_3871 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLK_3952 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:cbl00970]
D CLK_3820 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CLK_3868 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CLK_3950 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CLK_3826 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CLK_3916 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CLK_3924 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CLK_3931 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CLK_3827 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CLK_3912 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CLK_3945 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D CLK_3872 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D CLK_3944 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D CLK_3909 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CLK_3968 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CLK_3972 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CLK_3965 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CLK_3906 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D CLK_3849 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D CLK_3860 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D CLK_3921 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D CLK_3929 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D CLK_3967 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CLK_3970 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CLK_3974 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CLK_3875 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CLK_3907 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CLK_3926 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CLK_3918 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CLK_3913 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CLK_3917 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CLK_3932 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CLK_3925 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CLK_3943 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CLK_3922 tRNA-His K14226 tRNA-His; tRNA His
D CLK_3930 tRNA-His K14226 tRNA-His; tRNA His
D CLK_3869 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CLK_3948 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CLK_3959 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CLK_3962 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CLK_3919 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CLK_3927 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CLK_3903 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CLK_3902 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CLK_3923 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CLK_3915 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CLK_3833 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CLK_3928 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CLK_3837 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CLK_3920 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CLK_3819 tRNA-Met K14230 tRNA-Met; tRNA Met
D CLK_3951 tRNA-Met K14230 tRNA-Met; tRNA Met
D CLK_3956 tRNA-Met K14230 tRNA-Met; tRNA Met
D CLK_3960 tRNA-Met K14230 tRNA-Met; tRNA Met
D CLK_3957 tRNA-Met K14230 tRNA-Met; tRNA Met
D CLK_3958 tRNA-Met K14230 tRNA-Met; tRNA Met
D CLK_3961 tRNA-Met K14230 tRNA-Met; tRNA Met
D CLK_3841 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D CLK_3908 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D CLK_3845 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D CLK_3914 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CLK_3933 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CLK_3963 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CLK_3823 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CLK_3825 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CLK_3822 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CLK_3824 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CLK_3828 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CLK_3942 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CLK_3852 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CLK_3971 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CLK_3855 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CLK_3964 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CLK_3935 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D CLK_3853 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D CLK_3856 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D CLK_3854 tRNA-Val K14237 tRNA-Val; tRNA Val
D CLK_3969 tRNA-Val K14237 tRNA-Val; tRNA Val
D CLK_3966 tRNA-Val K14237 tRNA-Val; tRNA Val
D CLK_3973 tRNA-Val K14237 tRNA-Val; tRNA Val
D CLK_3910 tRNA-Val K14237 tRNA-Val; tRNA Val
D CLK_3901 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D CLK_0537 gltX; glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D CLK_2683 gatA; glutamyl-tRNA(Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D CLK_2682 gatB; glutamyl-tRNA(Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D CLK_2684 gatC; glutamyl-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D CLK_1949 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CLK_2447 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CLK_0462 aspS; aspartate--tRNA ligase K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23]
D CLK_3803 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D CLK_2982 glyS; glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D CLK_2530 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CLK_3722 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CLK_3156 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CLK_2360 selA; L-seryl-tRNA selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D CLK_2948 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CLK_3251 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CLK_1891 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D CLK_2099 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D CLK_2560 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CLK_3364 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CLK_3274 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CLK_2983 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CLK_0517 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CLK_2761 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CLK_2950 putative prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CLK_2448 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CLK_2523 pheS; phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CLK_2522 pheT; phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CLK_2740 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CLK_0647 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CLK_2748 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:cbl03060]
D CLK_2904 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D CLK_2938 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D CLK_3413 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D CLK_2456 secD; protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D CLK_2455 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D CLK_2460 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D CLK_3129 putative sporulation protein/membrane protein insertase, OxaA family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CLK_3351 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CLK_1826 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CLK_3975 srpB; bacterial signal recognition particle RNA K01983 ffs; SRP RNA
D CLK_1828 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D CLK_1820 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CLK_3783 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CLK_0956 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:cbl04122]
D CLK_0617 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CLK_1953 nifS; cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CLK_0201 rhodanese domain protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D CLK_0620 trmU-1; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D CLK_2298 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D CLK_1397 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D CLK_1392 moaD; molybdopterin converting factor subunit 1 K03636 moaD; sulfur-carrier protein
D CLK_0581 putative thiosulfate sulfurtransferase K21028 ynjE; molybdopterin synthase sulfurtransferase [EC:2.8.1.11]
D CLK_1396 moaC; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D CLK_1400 mog; molybdopterin biosynthesis enzyme Mog K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
C 03050 Proteasome
C 03018 RNA degradation [PATH:cbl03018]
D CLK_3412 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CLK_1788 pnpA; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D CLK_0036 rhlE; ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D CLK_3414 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D CLK_2189 ATP-dependent RNA helicase, DEAD/DEAH box family K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CLK_1162 dbpA; ATP-dependent RNA helicase DbpA K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CLK_1160 ATP-dependent RNA helicase, DEAD/DEAH box family K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CLK_1464 ATP-dependent RNA helicase, DEAD/DEAH box family K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CLK_0440 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D CLK_3309 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D CLK_1779 HDIG/HD/KH domain protein K18682 rny; ribonucrease Y [EC:3.1.-.-]
D CLK_1944 RNA-metabolizing metallo-beta-lactamase family protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D CLK_0736 RNA-metabolising metallo-beta-lactamase K12574 rnj; ribonuclease J [EC:3.1.-.-]
D CLK_2805 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CLK_2344 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CLK_2714 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CLK_1178 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:cbl03030]
D CLK_3433 exonuclease, DNA polymerase III, epsilon subunit family K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CLK_2806 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CLK_1799 polC; DNA polymerase III, alpha subunit, Gram-positive type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D CLK_A0158 dnaX; DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CLK_3165 dnaX; DNA polymerase III, gamma and tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CLK_3233 putative DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CLK_2353 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CLK_A0161 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CLK_3134 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CLK_A0115 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CLK_3104 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D CLK_A0285 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D CLK_2323 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D CLK_A0191 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D CLK_A0151 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CLK_3111 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CLK_A0114 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CLK_1349 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein
D CLK_3583 single-strand binding domain protein K03111 ssb; single-strand DNA-binding protein
D CLK_3593 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D CLK_1818 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D CLK_2397 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CLK_2687 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:cbl03410]
D CLK_2719 putative 8-oxoguanine DNA glycosylase K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
D CLK_3388 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D CLK_0705 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D CLK_0034 conserved domain protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D CLK_0062 methyladenine glycosylase family protein K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D CLK_3185 uracil-DNA glycosylase family protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D CLK_3249 udgA; uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D CLK_0961 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CLK_2150 AP endonuclease, family 2 K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D CLK_2397 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CLK_2149 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CLK_2687 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:cbl03420]
D CLK_3008 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D CLK_2818 uvrA; excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D CLK_2796 uvrA; excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D CLK_1765 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D CLK_2819 uvrB; excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B
D CLK_2812 uvrC; excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D CLK_2602 GIY-YIG domain protein K03703 uvrC; excinuclease ABC subunit C
D CLK_0763 helicase, UvrD/REP/exonuclease family protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CLK_2688 pcrA; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CLK_2758 conserved hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CLK_A0064 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CLK_0857 helicase, UvrD/REP family K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CLK_2297 putative helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CLK_2397 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CLK_2687 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CLK_3723 putative ATP-dependent helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
C 03430 Mismatch repair [PATH:cbl03430]
D CLK_1181 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D CLK_2516 MutS2 family protein K07456 mutS2; DNA mismatch repair protein MutS2
D CLK_0027 MutS domain protein K07456 mutS2; DNA mismatch repair protein MutS2
D CLK_1180 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D CLK_0763 helicase, UvrD/REP/exonuclease family protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CLK_2688 pcrA; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CLK_2758 conserved hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CLK_A0064 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CLK_0857 helicase, UvrD/REP family K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CLK_2297 putative helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CLK_1275 xseA; exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D CLK_1274 xseB; exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D CLK_2149 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CLK_A0151 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CLK_3111 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CLK_A0114 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CLK_1349 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein
D CLK_3583 single-strand binding domain protein K03111 ssb; single-strand DNA-binding protein
D CLK_2806 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CLK_1799 polC; DNA polymerase III, alpha subunit, Gram-positive type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D CLK_3134 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CLK_A0115 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CLK_A0158 dnaX; DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CLK_3165 dnaX; DNA polymerase III, gamma and tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CLK_2353 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CLK_A0161 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CLK_3233 putative DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CLK_3433 exonuclease, DNA polymerase III, epsilon subunit family K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CLK_2687 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:cbl03440]
D CLK_2149 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CLK_A0151 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CLK_3111 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CLK_A0114 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CLK_1349 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein
D CLK_3583 single-strand binding domain protein K03111 ssb; single-strand DNA-binding protein
D CLK_3136 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D CLK_3167 recR; recombination protein RecR K06187 recR; recombination protein RecR
D CLK_1780 recA; recA protein K03553 recA; recombination protein RecA
D CLK_2397 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CLK_2464 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D CLK_2463 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D CLK_1877 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CLK_A0002 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CLK_3347 helicase, RecD/TraA family K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D CLK_2806 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CLK_1799 polC; DNA polymerase III, alpha subunit, Gram-positive type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D CLK_3134 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CLK_A0115 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CLK_A0158 dnaX; DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CLK_3165 dnaX; DNA polymerase III, gamma and tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CLK_2353 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CLK_A0161 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CLK_3233 putative DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CLK_3433 exonuclease, DNA polymerase III, epsilon subunit family K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CLK_1893 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus and Lyssavirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:cbl02010]
D CLK_1403 tupA; tungstate ABC transporter, tungstate-binding protein K05772 tupA; tungstate transport system substrate-binding protein
D CLK_1402 putative tungstate ABC transporter, permease protein TupB K05773 tupB; tungstate transport system permease protein
D CLK_1401 putative tungstate ABC transporter, ATP-binding protein TupC K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6]
D CLK_0403 putative anion ABC transporter, solute-binding protein K02020 modA; molybdate transport system substrate-binding protein
D CLK_0964 modA; molybdate ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D CLK_0965 modB; molybdate ABC transporter, permease protein K02018 modB; molybdate transport system permease protein
D CLK_0404 putative anion ABC transporter, permease protein K02018 modB; molybdate transport system permease protein
D CLK_0966 putative molybdate ABC transporter, ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D CLK_0588 ABC transporter, substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D CLK_0589 ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein
D CLK_0590 ABC transporter, ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D CLK_3773 potCD; spermidine/putrescine transport system permease protein PotC/spermidine/putrescine-binding periplasmic protein PotD K11069 potD; spermidine/putrescine transport system substrate-binding protein
D CLK_3772 potB; spermidine/putrescine ABC transporter, permease protein PotB K11071 potB; spermidine/putrescine transport system permease protein
D CLK_3771 potA; spermidine/putrescine ABC transporter, ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D CLK_1101 glycine betaine/L-proline ABC transporter, permease/glycine betaine/L-proline-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D CLK_1100 glycine betaine/L-proline ABC transporter, ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D CLK_3479 ABC transporter, carbohydrate uptake transporter-1 (CUT1) family, ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D CLK_0993 carbohydrate uptake ABC transporter, CUT1 family, ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D CLK_3401 lipoprotein, bmp family K07335 bmpA; basic membrane protein A and related proteins
D CLK_3403 sugar ABC transporter, permease protein K23535 nupB; general nucleoside transport system permease protein
D CLK_3404 sugar ABC transporter, permease protein K23536 nupC; general nucleoside transport system permease protein
D CLK_3402 sugar ABC transporter, ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D CLK_0712 D-ribose-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D CLK_0710 ribose transport system permease protein RbsC K10440 rbsC; ribose transport system permease protein
D CLK_0709 ribose import ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D CLK_1909 pstS; phosphate ABC transporter, phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D CLK_3574 phosphate uptake ABC transporter, PhoT family, phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D CLK_1908 pstC; phosphate ABC transporter, permease protein PstC K02037 pstC; phosphate transport system permease protein
D CLK_3575 phosphate uptake ABC transporter, PhoT family, permease protein K02037 pstC; phosphate transport system permease protein
D CLK_1907 pstA; phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein
D CLK_3576 phosphate uptake ABC transporter, PhoT family, permease protein K02038 pstA; phosphate transport system permease protein
D CLK_1906 pstB; phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D CLK_3577 phosphate uptake ABC transporter, PhoT family, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D CLK_0616 polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein K16961 yxeM; putative S-methylcysteine transport system substrate-binding protein
D CLK_0843 amino acid ABC transporter, amino acid-binding protein K16961 yxeM; putative S-methylcysteine transport system substrate-binding protein
D CLK_0615 amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family K16962 yxeN; putative S-methylcysteine transport system permease protein
D CLK_0844 amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family K16962 yxeN; putative S-methylcysteine transport system permease protein
D CLK_0845 polar amino acid uptake family ABC transporter, PAAT family, ATP-binding protein K16963 yxeO; putative S-methylcysteine transport system ATP-binding protein
D CLK_1471 polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D CLK_1470 amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family K17077 artQ; arginine/lysine/histidine transport system permease protein
D CLK_1469 polar amino acid uptake family ABC transporter, PAAT family, ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D CLK_3657 putative high-affinity branched-chain amino acid ABC transporter, amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CLK_3658 high-affinity branched-chain amino acid ABC transporter, permease protein K01997 livH; branched-chain amino acid transport system permease protein
D CLK_3659 putative high-affinity branched-chain amino acid ABC transporter, permease protein K01998 livM; branched-chain amino acid transport system permease protein
D CLK_3660 putative high-affinity branched chain amino acid ABC transporter, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CLK_3661 putative high-affinity branched chain amino acid ABC transporter, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D CLK_0529 lipoprotein, NLPA family K02073 metQ; D-methionine transport system substrate-binding protein
D CLK_0530 lipoprotein, NLPA family K02073 metQ; D-methionine transport system substrate-binding protein
D CLK_0980 lipoprotein, NLPA family K02073 metQ; D-methionine transport system substrate-binding protein
D CLK_0528 methionine ABC transporter, MUT family, permease protein K02072 metI; D-methionine transport system permease protein
D CLK_0979 methionine ABC transporter, MUT family, permease protein K02072 metI; D-methionine transport system permease protein
D CLK_0527 methionine ABC transporter, MUT family, ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D CLK_0978 methionine ABC transporter, MUT family, ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D CLK_2547 oligopeptide/dipeptide ABC transporter, oligopeptide/dipeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D CLK_2681 bacterial extracellular solute-binding protein, family 5 K15580 oppA; oligopeptide transport system substrate-binding protein
D CLK_2546 oligopeptide/dipeptide ABC transporter, permease protein K15581 oppB; oligopeptide transport system permease protein
D CLK_2545 oligopeptide/dipeptide ABC transporter, permease protein K15582 oppC; oligopeptide transport system permease protein
D CLK_2544 oligopeptide/dipeptide ABC transporter, ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D CLK_2543 oligopeptide/dipeptide ABC transporter, ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D CLK_0807 periplasmic solute binding protein family K09815 znuA; zinc transport system substrate-binding protein
D CLK_0805 putative metal ion ABC transporter, permease protein K09816 znuB; zinc transport system permease protein
D CLK_0806 putative metal ion ABC transporter, ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D CLK_0355 cbiN; cobalt transport protein K02009 cbiN; cobalt/nickel transport protein
D CLK_0354 cbiM; cobalamin biosynthesis protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein
D CLK_0356 cbiQ; cobalt ABC transporter, permease protein CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D CLK_1703 BioY family protein K03523 bioY; biotin transport system substrate-specific component
D CLK_0343 BioY family protein K03523 bioY; biotin transport system substrate-specific component
D CLK_1527 putative ABC transporter, permease protein K16785 ecfT; energy-coupling factor transport system permease protein
D CLK_1425 putative ABC transporter, permease protein K16785 ecfT; energy-coupling factor transport system permease protein
D CLK_2891 cobalt transport permease, CbiQ family K16785 ecfT; energy-coupling factor transport system permease protein
D CLK_2893 putative cobalt ABC transporter, ATP-binding protein K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D CLK_2892 putative cobalt ABC transporter, ATP-binding protein K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D CLK_1678 putative sodium extrusion protein NatB K09696 natB; sodium transport system permease protein
D CLK_1679 putative sodium extrusion ATP-binding protein NatA K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D CLK_1732 putative membrane protein K19310 bcrB; bacitracin transport system permease protein
D CLK_1733 antibiotic ABC transporter, ATP-binding protein K19309 bcrA; bacitracin transport system ATP-binding protein
D CLK_0834 peptide ABC transporter, Pep4E family, permease protein K11632 bceB; bacitracin transport system permease protein
D CLK_0833 peptide ABC transporter, Pep4E family, ATP-binding protein K11631 bceA; bacitracin transport system ATP-binding protein
D CLK_1050 putative lantibiotic ABC transporter, permease protein K20491 nisE; lantibiotic transport system permease protein
D CLK_1051 putative lantibiotic ABC transporter, permease protein K20492 nisG; lantibiotic transport system permease protein
D CLK_1049 antibiotic ABC transporter, ATP-binding protein K20490 nisF; lantibiotic transport system ATP-binding protein
D CLK_2822 efflux ABC transporter, permease protein, FtsX family K09811 ftsX; cell division transport system permease protein
D CLK_A0018 efflux ABC transporter, permease protein K09811 ftsX; cell division transport system permease protein
D CLK_2823 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D CLK_A0019 methionine import ATP-binding protein MetN 2 K09812 ftsE; cell division transport system ATP-binding protein
D CLK_2173 ABC transporter, permease protein K16919 ytrC_D; acetoin utilization transport system permease protein
D CLK_2174 ABC transporter, ATP-binding protein K16921 ytrB; acetoin utilization transport system ATP-binding protein
D CLK_0497 ABC transporter ATP-binding/permease protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D CLK_1729 putative ABC transporter, ATP-binding/permease protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D CLK_0498 ABC transport ATP-binding/permease protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D CLK_1064 ABC transporter ATP-binding/permease protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D CLK_1728 ABC transporter, ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D CLK_0162 multidrug resistance ABC transporter ATP-binding and permease protein K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2]
D CLK_1412 ABC transporter, ATP-binding/permease protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D CLK_1388 putative ABC transporter, ATP-binding/permease protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D CLK_1411 putative ABC transporter, ATP-binding/permease protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D CLK_1387 ABC transporter, ATP-binding/permease protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D CLK_3682 ABC transporter CbaT K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
D CLK_3763 ABC transporter, ATP-binding protein K18231 msr; macrolide transport system ATP-binding/permease protein
D CLK_2252 drug resistance ABC transporter, RA2 family, ATP-binding protein K19350 lsa; lincosamide and streptogramin A transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS) [PATH:cbl02060]
D CLK_2881 ptsI; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D CLK_1773 ptsH; phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D CLK_0770 ptsG; PTS system, glucose-specific, IIABC component K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D CLK_2139 PTS system, glucose family, IIABC component K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D CLK_3458 PTS system, glucose family, EIIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CLK_3483 PTS system, glucose family, IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CLK_3466 PTS system, glucose/glucoside family, IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CLK_2226 nagE; PTS system, N-acetylglucosamine-specific, IIBC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D CLK_3455 PTS system, maltose/glucose-specfic, IIBC component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D CLK_3481 PTS system, glucose/maltose-specfic, IIBC component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D CLK_1068 PTS system, glucose/glucoside family, IIBC component K20108 malT; maltose PTS system EIICB or EIICBA component [EC:2.7.1.208]
D CLK_0788 phosphotransferase system domain protein K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D CLK_0056 PTS system, beta-glucoside-specific, IIABC component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D CLK_3464 PTS system, glucose/glucoside family, IIBC component K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-]
D CLK_1440 treP; PTS system, trehalose-specific IIBC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D CLK_2772 PTS system, lactose/cellobiose-specific family, IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D CLK_2773 PTS system, lactose/cellobiose-specific family, IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D CLK_2775 PTS system, lactose/cellobiose family, IIC component K02761 celB; cellobiose PTS system EIIC component
D CLK_2857 PTS system, glucitol/sorbitol-specific, IIA component K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D CLK_2858 PTS system, glucitol/sorbitol-specific, IIBC component K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D CLK_2859 PTS system, glucitol/sorbitol-specific, IIC component K02783 srlA; glucitol/sorbitol PTS system EIIC component
D CLK_1610 putative PTS system, L-ascorbate family, IIA component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D CLK_1609 putative PTS system, L-Ascorbate family, IIB component K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D CLK_1608 putative PTS system, L-ascorbate family, IIC component K03475 ulaA; ascorbate PTS system EIIC component
D CLK_1145 pfkB; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
C 03070 Bacterial secretion system [PATH:cbl03070]
D CLK_2456 secD; protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D CLK_2455 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D CLK_2938 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D CLK_3413 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D CLK_2904 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D CLK_2460 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D CLK_3129 putative sporulation protein/membrane protein insertase, OxaA family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CLK_3351 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CLK_1828 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D CLK_1826 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CLK_A0294 ATPase involved in conjugal plasmid transfer K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D CLK_A0293 possible plasmid transfer factor, TraK K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:cbl02020]
D CLK_1910 sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D CLK_1911 putative phosphate regulon DNA-binding response regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D CLK_3540 DNA-binding response regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D CLK_1909 pstS; phosphate ABC transporter, phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D CLK_3574 phosphate uptake ABC transporter, PhoT family, phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D CLK_3490 sensor histidine kinase K07650 cssS; two-component system, OmpR family, sensor histidine kinase CssS [EC:2.7.13.3]
D CLK_3489 DNA-binding response regulator K07770 cssR; two-component system, OmpR family, response regulator CssR
D CLK_3010 putative protease K04771 degP; serine protease Do [EC:3.4.21.107]
D CLK_2115 flagellin K02406 fliC; flagellin
D CLK_2055 flagellin K02406 fliC; flagellin
D CLK_2082 fliC; flagellin K02406 fliC; flagellin
D CLK_2116 flagellin K02406 fliC; flagellin
D CLK_A0218 flagellin K02406 fliC; flagellin
D CLK_3424 flagellin protein K02406 fliC; flagellin
D CLK_2029 fliA; RNA polymerase sigma factor for flagellar operon FliA K02405 fliA; RNA polymerase sigma factor FliA
D CLK_1667 putative chemotaxis protein MotA K02556 motA; chemotaxis protein MotA
D CLK_2040 motA; chemotaxis protein MotA K02556 motA; chemotaxis protein MotA
D CLK_0411 DNA-binding response regulator K07668 vicR; two-component system, OmpR family, response regulator VicR
D CLK_3133 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D CLK_0833 peptide ABC transporter, Pep4E family, ATP-binding protein K11631 bceA; bacitracin transport system ATP-binding protein
D CLK_0834 peptide ABC transporter, Pep4E family, permease protein K11632 bceB; bacitracin transport system permease protein
D CLK_0837 sensor histidine kinase K11633 yxdK; two-component system, OmpR family, sensor histidine kinase YxdK [EC:2.7.13.3]
D CLK_3508 sensor histidine kinase K11633 yxdK; two-component system, OmpR family, sensor histidine kinase YxdK [EC:2.7.13.3]
D CLK_0836 DNA-binding response regulator K11634 yxdJ; two-component system, OmpR family, response regulator YxdJ
D CLK_3507 DNA-binding response regulator K11634 yxdJ; two-component system, OmpR family, response regulator YxdJ
D CLK_3510 peptide ABC transporter, Pep4E family, ATP-binding protein K11635 yxdL; putative ABC transport system ATP-binding protein
D CLK_0838 peptide ABC transporter, Pep4E family, ATP-binding protein K11635 yxdL; putative ABC transport system ATP-binding protein
D CLK_3511 peptide ABC transporter, Pep4E family, permease protein K11636 yxdM; putative ABC transport system permease protein
D CLK_0839 peptide ABC transporter, Pep4E family, permease protein K11636 yxdM; putative ABC transport system permease protein
D CLK_1422 sensor histidine kinase K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D CLK_3435 VanS K18350 vanSC; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D CLK_1423 DNA-binding response regulator K18344 vanRB; two-component system, OmpR family, response regulator VanR
D CLK_3434 regulatory protein VanR K18349 vanRC; two-component system, OmpR family, response regulator VanR
D CLK_2765 DNA-binding response regulator K18349 vanRC; two-component system, OmpR family, response regulator VanR
D CLK_3451 regulatory protein VanR K18349 vanRC; two-component system, OmpR family, response regulator VanR
D CLK_3553 DNA-binding response regulator K18349 vanRC; two-component system, OmpR family, response regulator VanR
D CLK_0478 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D CLK_0007 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D CLK_2842 sensory transduction histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D CLK_1759 sensor histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D CLK_1760 DNA-binding response regulator K18941 arlR; two-component system, OmpR family, response regulator ArlR
D CLK_2843 alkaline phosphatase synthesis transcriptional regulatory protein PhoP K18941 arlR; two-component system, OmpR family, response regulator ArlR
D CLK_1381 sensor histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D CLK_1053 putative lantibiotic biosynthesis sensor histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D CLK_1052 putative lantibiotic biosynthesis regulatory protein K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D CLK_1382 DNA-binding response regulator K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D CLK_1049 antibiotic ABC transporter, ATP-binding protein K20490 nisF; lantibiotic transport system ATP-binding protein
D CLK_1050 putative lantibiotic ABC transporter, permease protein K20491 nisE; lantibiotic transport system permease protein
D CLK_1051 putative lantibiotic ABC transporter, permease protein K20492 nisG; lantibiotic transport system permease protein
D CLK_1262 spo0A; sporulation transcription factor Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
D CLK_3389 malate dehydrogenase (oxaloacetate-decarboxylating) K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D CLK_1679 putative sodium extrusion ATP-binding protein NatA K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D CLK_1678 putative sodium extrusion protein NatB K09696 natB; sodium transport system permease protein
D CLK_3519 putative accessory gene regulator protein B K07813 agrB; accessory gene regulator B
D CLK_3526 putative accessory gene regulator protein B K07813 agrB; accessory gene regulator B
D CLK_0453 putative AIP processing-secretion protein K07813 agrB; accessory gene regulator B
D CLK_0452 hypothetical protein K07800 agrD; AgrD protein
D CLK_3520 putative lipoprotein K07800 agrD; AgrD protein
D CLK_3527 hypothetical protein K07800 agrD; AgrD protein
D CLK_0626 sensor histidine kinase K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D CLK_0624 DNA-binding response regulator, LytTr family K07707 agrA; two-component system, LytTR family, response regulator AgrA
D CLK_2122 csrA; carbon storage regulator K03563 csrA; carbon storage regulator
D CLK_A0311 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D CLK_A0282 hypothetical protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D CLK_A0309 bacterial type II secretion system protein F domain K12510 tadB; tight adherence protein B
D CLK_A0308 bacterial type II secretion system protein F domain K12511 tadC; tight adherence protein C
D CLK_3033 putative glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CLK_2238 CoA-transferase, A subunit K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D CLK_2239 CoA-transferase, B subunit K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D CLK_2598 thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CLK_3406 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D CLK_1297 putative pilin K02650 pilA; type IV pilus assembly protein PilA
D CLK_1224 hupS; [Ni/Fe] hydrogenase, small subunit K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
D CLK_1223 hupL; [Ni/Fe] hydrogenase, large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D CLK_2134 cheR; chemotaxis protein methyltransferase, CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D CLK_2198 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLK_3762 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLK_3589 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLK_3639 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLK_0094 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLK_0133 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLK_1004 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLK_1037 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLK_0798 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLK_2180 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLK_2192 putative methyl-accepting chemotaxis protein TlpC K03406 mcp; methyl-accepting chemotaxis protein
D CLK_1374 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLK_1155 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLK_2217 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLK_2610 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLK_1128 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLK_1454 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLK_2137 cheW; chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D CLK_2130 putative chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D CLK_2133 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D CLK_0443 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CLK_2131 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CLK_2135 cheB; protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D CLK_1159 cheV; chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D CLK_0393 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D CLK_0779 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D CLK_0012 sensor histidine kinase K07717 glnK; two-component system, sensor histidine kinase GlnK [EC:2.7.13.3]
D CLK_0011 response regulator K07719 glnL; two-component system, response regulator GlnL
D CLK_2195 glsA; glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D CLK_3323 mnaA; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D CLK_2127 negative regulator of flagellin synthesis FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:cbl02024]
D CLK_0141 luxS; S-ribosylhomocysteinase LuxS K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D CLK_1178 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D CLK_1372 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D CLK_1853 amino acid permease family protein K20265 gadC; glutamate:GABA antiporter
D CLK_3531 amino acid permease family protein K20265 gadC; glutamate:GABA antiporter
D CLK_0549 putative ABC transporter, solute-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D CLK_0551 ABC transporter, permease protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D CLK_0550 ABC transporter, permease protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D CLK_0552 ABC transporter, ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D CLK_3657 putative high-affinity branched-chain amino acid ABC transporter, amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CLK_3658 high-affinity branched-chain amino acid ABC transporter, permease protein K01997 livH; branched-chain amino acid transport system permease protein
D CLK_3659 putative high-affinity branched-chain amino acid ABC transporter, permease protein K01998 livM; branched-chain amino acid transport system permease protein
D CLK_3660 putative high-affinity branched chain amino acid ABC transporter, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CLK_3661 putative high-affinity branched chain amino acid ABC transporter, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D CLK_1969 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CLK_0393 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D CLK_0779 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D CLK_2263 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D CLK_0284 putative membrane protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D CLK_2798 putative membrane protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D CLK_3062 putative membrane protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D CLK_0289 putative membrane protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D CLK_0452 hypothetical protein K07800 agrD; AgrD protein
D CLK_3520 putative lipoprotein K07800 agrD; AgrD protein
D CLK_3527 hypothetical protein K07800 agrD; AgrD protein
D CLK_3519 putative accessory gene regulator protein B K07813 agrB; accessory gene regulator B
D CLK_3526 putative accessory gene regulator protein B K07813 agrB; accessory gene regulator B
D CLK_0453 putative AIP processing-secretion protein K07813 agrB; accessory gene regulator B
D CLK_0626 sensor histidine kinase K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D CLK_0624 DNA-binding response regulator, LytTr family K07707 agrA; two-component system, LytTR family, response regulator AgrA
D CLK_2547 oligopeptide/dipeptide ABC transporter, oligopeptide/dipeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D CLK_2681 bacterial extracellular solute-binding protein, family 5 K15580 oppA; oligopeptide transport system substrate-binding protein
D CLK_2546 oligopeptide/dipeptide ABC transporter, permease protein K15581 oppB; oligopeptide transport system permease protein
D CLK_2545 oligopeptide/dipeptide ABC transporter, permease protein K15582 oppC; oligopeptide transport system permease protein
D CLK_2544 oligopeptide/dipeptide ABC transporter, ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D CLK_2543 oligopeptide/dipeptide ABC transporter, ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D CLK_3682 ABC transporter CbaT K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
D CLK_3683 putative bacteriocin ABC transporter, bacteriocin-binding protein K20345 blpB; membrane fusion protein, peptide pheromone/bacteriocin exporter
D CLK_0668 putative oligopeptide ABC transporter, oligopeptide-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CLK_1134 peptide/opine/nickel uptake ABC transporter, PepT family, substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CLK_0215 methyl-accepting chemotaxis protein/bacterial extracellular solute-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CLK_0799 peptide/opine/nickel uptake ABC transporter, PepT family, substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CLK_0044 nickel transport system permease protein NikB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CLK_0667 putative oligopeptide ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CLK_1135 peptide/opine/nickel uptake ABC transporter, PepT family, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CLK_0800 peptide/opine/nickel uptake ABC transporter, PepT family, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CLK_0043 glutathione transport system permease protein GsiD K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CLK_0666 putative oligopeptide ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CLK_1136 peptide/opine/nickel uptake ABC transporter, PepT family, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CLK_0801 peptide/opine/nickel uptake ABC transporter, PepT family, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CLK_0042 dipeptide transport ATP-binding protein DppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CLK_0802 peptide/opine/nickel uptake ABC transporter, PepT family, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CLK_1137 ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CLK_3129 putative sporulation protein/membrane protein insertase, OxaA family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CLK_2938 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D CLK_3413 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D CLK_2904 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D CLK_2460 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D CLK_3351 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CLK_1828 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D CLK_1826 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CLK_1262 spo0A; sporulation transcription factor Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
D CLK_2020 putative phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
D CLK_1381 sensor histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D CLK_1053 putative lantibiotic biosynthesis sensor histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D CLK_1052 putative lantibiotic biosynthesis regulatory protein K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D CLK_1382 DNA-binding response regulator K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D CLK_1049 antibiotic ABC transporter, ATP-binding protein K20490 nisF; lantibiotic transport system ATP-binding protein
D CLK_1050 putative lantibiotic ABC transporter, permease protein K20491 nisE; lantibiotic transport system permease protein
D CLK_1051 putative lantibiotic ABC transporter, permease protein K20492 nisG; lantibiotic transport system permease protein
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:cbl02030]
D CLK_2198 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLK_3762 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLK_3589 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLK_3639 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLK_0094 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLK_0133 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLK_1004 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLK_1037 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLK_0798 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLK_2180 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLK_2192 putative methyl-accepting chemotaxis protein TlpC K03406 mcp; methyl-accepting chemotaxis protein
D CLK_1374 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLK_1155 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLK_2217 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLK_2610 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLK_1128 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLK_1454 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLK_0712 D-ribose-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D CLK_2133 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D CLK_2137 cheW; chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D CLK_2130 putative chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D CLK_0443 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CLK_2131 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CLK_2132 cheC; chemotaxis protein CheC K03410 cheC; chemotaxis protein CheC
D CLK_1168 cheX; chemotaxis protein CheX K03409 cheX; chemotaxis protein CheX
D CLK_2135 cheB; protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D CLK_1159 cheV; chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D CLK_2136 cheD; chemotaxis protein CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D CLK_2134 cheR; chemotaxis protein methyltransferase, CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D CLK_2049 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D CLK_2129 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D CLK_2128 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D CLK_1667 putative chemotaxis protein MotA K02556 motA; chemotaxis protein MotA
D CLK_2040 motA; chemotaxis protein MotA K02556 motA; chemotaxis protein MotA
D CLK_2039 motB; chemotaxis protein MotB K02557 motB; chemotaxis protein MotB
D CLK_1666 putative chemotaxis MotB protein K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:cbl02040]
D CLK_2051 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D CLK_2050 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D CLK_2049 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D CLK_2048 fliH; flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D CLK_2047 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D CLK_2046 fliJ; flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ
D CLK_2045 fliK; flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK
D CLK_2038 fliL; flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D CLK_2129 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D CLK_2128 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D CLK_2037 fliO; flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D CLK_2036 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D CLK_2035 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D CLK_2033 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D CLK_2034 flagellar biosynthetic protein FliR/FlhB K13820 fliR-flhB; flagellar biosynthesis protein FliR/FlhB
D CLK_2054 flgB; flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D CLK_2044 flgD; flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D CLK_2042 flgE; flagellar hook protein flgE K02390 flgE; flagellar hook protein FlgE
D CLK_2026 flagellar basal body rod protein K02391 flgF; flagellar basal-body rod protein FlgF
D CLK_2025 flagellar basal body rod protein K02392 flgG; flagellar basal-body rod protein FlgG
D CLK_2125 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D CLK_2124 flgL; flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL
D CLK_2115 flagellin K02406 fliC; flagellin
D CLK_2055 flagellin K02406 fliC; flagellin
D CLK_2082 fliC; flagellin K02406 fliC; flagellin
D CLK_2116 flagellin K02406 fliC; flagellin
D CLK_A0218 flagellin K02406 fliC; flagellin
D CLK_3424 flagellin protein K02406 fliC; flagellin
D CLK_2118 fliD; Flagellar hook-associated protein 2 K02407 fliD; flagellar hook-associated protein 2
D CLK_2119 fliS; flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D CLK_1667 putative chemotaxis protein MotA K02556 motA; chemotaxis protein MotA
D CLK_2040 motA; chemotaxis protein MotA K02556 motA; chemotaxis protein MotA
D CLK_2039 motB; chemotaxis protein MotB K02557 motB; chemotaxis protein MotB
D CLK_1666 putative chemotaxis MotB protein K02557 motB; chemotaxis protein MotB
D CLK_2127 negative regulator of flagellin synthesis FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D CLK_2322 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D CLK_A0007 RNA polymerase sigma-E factor K03086 rpoD; RNA polymerase primary sigma factor
D CLK_A0323 putative sporulation sigma factor SigK K03086 rpoD; RNA polymerase primary sigma factor
D CLK_3406 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D CLK_2029 fliA; RNA polymerase sigma factor for flagellar operon FliA K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D CLK_3412 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
D CLK_1087 putative 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:cbl01501]
D CLK_2547 oligopeptide/dipeptide ABC transporter, oligopeptide/dipeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D CLK_2681 bacterial extracellular solute-binding protein, family 5 K15580 oppA; oligopeptide transport system substrate-binding protein
D CLK_2546 oligopeptide/dipeptide ABC transporter, permease protein K15581 oppB; oligopeptide transport system permease protein
D CLK_2545 oligopeptide/dipeptide ABC transporter, permease protein K15582 oppC; oligopeptide transport system permease protein
D CLK_2544 oligopeptide/dipeptide ABC transporter, ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D CLK_2543 oligopeptide/dipeptide ABC transporter, ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D CLK_0078 peptidase, M56 family protein K02172 blaR1; bla regulator protein blaR1
D CLK_0077 blaI; penicillinase repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D CLK_0162 multidrug resistance ABC transporter ATP-binding and permease protein K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2]
D CLK_2476 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CLK_2383 penicillin-binding protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:cbl01502]
D CLK_1422 sensor histidine kinase K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D CLK_3435 VanS K18350 vanSC; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D CLK_1423 DNA-binding response regulator K18344 vanRB; two-component system, OmpR family, response regulator VanR
D CLK_3434 regulatory protein VanR K18349 vanRC; two-component system, OmpR family, response regulator VanR
D CLK_2765 DNA-binding response regulator K18349 vanRC; two-component system, OmpR family, response regulator VanR
D CLK_3451 regulatory protein VanR K18349 vanRC; two-component system, OmpR family, response regulator VanR
D CLK_3553 DNA-binding response regulator K18349 vanRC; two-component system, OmpR family, response regulator VanR
D CLK_3656 ddlB; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CLK_2830 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CLK_3463 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CLK_1123 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CLK_0939 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D CLK_0940 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CLK_0304 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CLK_2146 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D CLK_0478 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D CLK_0007 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:cbl01503]
D CLK_2886 cwlD; N-acetylmuramoyl-L-alanine amidase CwlD K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLK_2504 putative N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLK_2505 putative N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLK_0913 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLK_0907 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLK_2399 putative N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLK_3010 putative protease K04771 degP; serine protease Do [EC:3.4.21.107]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:cbl01000]
C 01001 Protein kinases [BR:cbl01001]
D CLK_1886 protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D CLK_2074 capsular exopolysaccharide family protein K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D CLK_1910 sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D CLK_3490 sensor histidine kinase K07650 cssS; two-component system, OmpR family, sensor histidine kinase CssS [EC:2.7.13.3]
D CLK_0837 sensor histidine kinase K11633 yxdK; two-component system, OmpR family, sensor histidine kinase YxdK [EC:2.7.13.3]
D CLK_3508 sensor histidine kinase K11633 yxdK; two-component system, OmpR family, sensor histidine kinase YxdK [EC:2.7.13.3]
D CLK_1422 sensor histidine kinase K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D CLK_3435 VanS K18350 vanSC; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D CLK_2842 sensory transduction histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D CLK_1759 sensor histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D CLK_1381 sensor histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D CLK_1053 putative lantibiotic biosynthesis sensor histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D CLK_0626 sensor histidine kinase K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D CLK_2725 sensor histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D CLK_2133 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D CLK_0012 sensor histidine kinase K07717 glnK; two-component system, sensor histidine kinase GlnK [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:cbl01009]
D CLK_1415 leucine-rich repeat protein K17550 PPP1R7; protein phosphatase 1 regulatory subunit 7
D CLK_1420 leucine-rich repeat protein K17550 PPP1R7; protein phosphatase 1 regulatory subunit 7
D CLK_2805 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CLK_1438 hsp90; heat shock protein K04079 HSP90A; molecular chaperone HtpG
D CLK_1887 protein phosphatase family protein K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
C 01002 Peptidases and inhibitors [BR:cbl01002]
D CLK_0956 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D CLK_0757 type IV leader peptidase family protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D CLK_2351 gpr; GPR endopeptidase K06012 gpr; spore protease [EC:3.4.24.78]
D CLK_1222 hydrogenase maturation protease K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-]
D CLK_1917 spoIIGA; sporulation factor SpoIIGA K06383 spoIIGA; stage II sporulation protein GA (sporulation sigma-E factor processing peptidase) [EC:3.4.23.-]
D CLK_1375 cloSI; clostripain K08587 cloSI; clostripain [EC:3.4.22.8]
D CLK_2711 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D CLK_3682 ABC transporter CbaT K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
D CLK_3239 NlpC/P60 family protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D CLK_2196 conserved hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D CLK_1258 nlpC/P60 family protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D CLK_A0152 cell wall-associated hydrolase K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D CLK_A0315 NLP/P60 protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D CLK_3715 putative peptidoglycan hydrolase K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D CLK_3689 SagA protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D CLK_2272 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D CLK_2304 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D CLK_2853 glmS; glutamine-fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CLK_2154 DJ-1 family protein K03152 thiJ; protein deglycase [EC:3.5.1.124]
D CLK_0469 DJ-1/PfpI family protein K03152 thiJ; protein deglycase [EC:3.5.1.124]
D CLK_1590 sortase family protein K07284 srtA; sortase A [EC:3.4.22.70]
D CLK_3519 putative accessory gene regulator protein B K07813 agrB; accessory gene regulator B
D CLK_3526 putative accessory gene regulator protein B K07813 agrB; accessory gene regulator B
D CLK_0453 putative AIP processing-secretion protein K07813 agrB; accessory gene regulator B
D CLK_1650 CAAX amino terminal protease family protein K07052 K07052; CAAX protease family protein
D CLK_0238 CAAX amino protease family protein K07052 K07052; CAAX protease family protein
D CLK_1755 putative membrane-associated protease K07052 K07052; CAAX protease family protein
D CLK_0750 CAAX amino terminal protease family protein K07052 K07052; CAAX protease family protein
D CLK_2624 CAAX amino terminal protease family protein K07052 K07052; CAAX protease family protein
D CLK_0507 CAAX amino terminal protease family protein K07052 K07052; CAAX protease family protein
D CLK_3701 CAAX amino terminal protease family protein K07052 K07052; CAAX protease family protein
D CLK_3778 CAAX amino terminal protease family protein K07052 K07052; CAAX protease family protein
D CLK_3751 CAAX amino terminal protease family protein K07052 K07052; CAAX protease family protein
D CLK_3814 CAAX amino terminal protease family protein K07052 K07052; CAAX protease family protein
D CLK_0927 bacillolysin K01400 nprE; bacillolysin [EC:3.4.24.28]
D CLK_0923 npr; thermolysin metallopeptidase K01400 nprE; bacillolysin [EC:3.4.24.28]
D CLK_0924 npr; thermolysin metallopeptidase K01400 nprE; bacillolysin [EC:3.4.24.28]
D CLK_0925 npr; thermolysin metallopeptidase K01400 nprE; bacillolysin [EC:3.4.24.28]
D CLK_0926 npr; thermolysin metallopeptidase K01400 nprE; bacillolysin [EC:3.4.24.28]
D CLK_1084 colG; collagenase K01387 colA; microbial collagenase [EC:3.4.24.3]
D CLK_0816 zinc carboxypeptidase family protein K01308 yqgT; g-D-glutamyl-meso-diaminopimelate peptidase [EC:3.4.19.11]
D CLK_0478 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D CLK_0007 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D CLK_2727 peptidase family protein K06972 PITRM1; presequence protease [EC:3.4.24.-]
D CLK_0664 dipeptidase family protein K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D CLK_2760 putative dipeptidase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D CLK_3640 pepT; peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D CLK_1672 pepD; aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D CLK_2264 pepD; aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D CLK_0829 pepD; aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D CLK_2902 map; methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D CLK_3044 map; methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D CLK_3532 metallopeptidase, family M24 K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9]
D CLK_1484 putative Xaa-Pro dipeptidase K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9]
D CLK_0481 peptidase, M24 family K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9]
D CLK_1707 metallopeptidase, family M24 K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D CLK_3752 pepP; Xaa-pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D CLK_1613 peptidase, M24 family protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D CLK_A0076 botA; bontoxilysin A K06011 boNT; botulinum neurotoxin [EC:3.4.24.69]
D CLK_2181 aminopeptidase K19689 ampS; aminopeptidase [EC:3.4.11.-]
D CLK_2878 iadA; isoaspartyl dipeptidase K01305 iadA; beta-aspartyl-dipeptidase (metallo-type) [EC:3.4.19.-]
D CLK_2759 hflB; ATP-dependent metallopeptidase HflB K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CLK_2989 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CLK_3591 ATP-dependent metalloprotease K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CLK_A0273 putative Cell division protease FtsH homolog K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CLK_3395 glutamyl aminopeptidase family protein K01269 yhfE; aminopeptidase [EC:3.4.11.-]
D CLK_2377 putative metalloprotease K06402 spoIVFB; stage IV sporulation protein FB [EC:3.4.24.-]
D CLK_1801 rseP; RIP metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D CLK_0078 peptidase, M56 family protein K02172 blaR1; bla regulator protein blaR1
D CLK_3010 putative protease K04771 degP; serine protease Do [EC:3.4.21.107]
D CLK_3064 subtilase family protein K17734 aprX; serine protease AprX [EC:3.4.21.-]
D CLK_1245 dacF; serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CLK_1239 putative serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CLK_2363 D-alanyl-D-alanine carboxypeptidase family protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CLK_0847 D-alanyl-D-alanine carboxypeptidase family protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CLK_2629 clpP; ATP-dependent Clp protease, proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D CLK_0886 prophage LambdaBa02, Clp protease family protein K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D CLK_3105 ATP-dependent protease K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D CLK_2626 lon; ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D CLK_2627 lonB; ATP-dependent protease LonB K04076 lonB; ATP-dependent Lon protease [EC:3.4.21.53]
D CLK_1175 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D CLK_1820 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CLK_3783 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CLK_1485 prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D CLK_1546 alpha/beta hydrolase family protein K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D CLK_2821 carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D CLK_3294 cphB; cyanophycinase K13282 cphB; cyanophycinase [EC:3.4.15.6]
D CLK_3588 putative membrane associated peptidase K19225 gluP; rhomboid protease GluP [EC:3.4.21.105]
D CLK_1263 spoIVB; stage IV sporulation protein B K06399 spoIVB; stage IV sporulation protein B [EC:3.4.21.116]
D CLK_3225 LD-carboxypeptidase family protein K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D CLK_1940 peptidase, U32 family K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D CLK_2517 peptidase, U32 family K08303 prtC; U32 family peptidase [EC:3.4.-.-]
C 01003 Glycosyltransferases [BR:cbl01003]
D CLK_3302 conserved hypothetical protein K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D CLK_2476 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CLK_A0017 penicillin-binding protein, 1A family K18770 pbpD; penicillin-binding protein 4 [EC:2.4.99.28 3.4.16.4]
D CLK_2486 glycosyl transferase, WecB/TagA/CpsF family K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D CLK_3322 tagO; undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D CLK_2752 glycosyl transferase, group 36 family protein K13688 chvB; cyclic beta-1,2-glucan glucanotransferase [EC:2.4.1.397]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:cbl01005]
D CLK_3491 glycosyl transferase, group 2 family K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D CLK_3322 tagO; undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:cbl01011]
D CLK_3334 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CLK_3035 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CLK_2810 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CLK_3017 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D CLK_2981 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D CLK_0938 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CLK_3656 ddlB; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CLK_2830 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CLK_3463 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CLK_1123 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CLK_3032 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D CLK_3225 LD-carboxypeptidase family protein K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D CLK_0940 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CLK_0304 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CLK_2146 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D CLK_3605 uppP; undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CLK_3509 uppP; undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CLK_2840 PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CLK_3538 PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CLK_2489 mviN; integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D CLK_2476 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CLK_A0017 penicillin-binding protein, 1A family K18770 pbpD; penicillin-binding protein 4 [EC:2.4.99.28 3.4.16.4]
D CLK_2383 penicillin-binding protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D CLK_0937 stage V sporulation protein D K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
D CLK_2815 penicillin-binding protein K05364 pbpA; penicillin-binding protein A
D CLK_1245 dacF; serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CLK_1239 putative serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CLK_2363 D-alanyl-D-alanine carboxypeptidase family protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CLK_0847 D-alanyl-D-alanine carboxypeptidase family protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CLK_0478 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D CLK_0007 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D CLK_3239 NlpC/P60 family protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D CLK_2196 conserved hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D CLK_1258 nlpC/P60 family protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D CLK_A0152 cell wall-associated hydrolase K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D CLK_A0315 NLP/P60 protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D CLK_3715 putative peptidoglycan hydrolase K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D CLK_3689 SagA protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D CLK_1590 sortase family protein K07284 srtA; sortase A [EC:3.4.22.70]
D CLK_2395 transglycosylase SLT domain protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D CLK_1942 conserved hypothetical protein TIGR00247 K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D CLK_3383 sleB; spore-cortex-lytic enzyme K27245 sleB; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D CLK_0767 cell Wall hydrolase K27245 sleB; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D CLK_3335 spoIID; stage II sporulation protein D K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29]
D CLK_2886 cwlD; N-acetylmuramoyl-L-alanine amidase CwlD K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLK_2504 putative N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLK_2505 putative N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLK_0913 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLK_0907 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLK_2399 putative N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:cbl01004]
D CLK_3074 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D CLK_3077 fabH; 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CLK_0132 3-oxoacyl-[acyl-carrier-protein] synthase III, homolog K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CLK_3072 fabF; beta-ketoacyl-acyl-carrier-protein synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CLK_3713 oxidoreductase, short chain dehydrogenase/reductase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CLK_3073 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CLK_3070 fabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D CLK_3075 oxidoreductase, 2-nitropropane dioxygenase family K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D CLK_2293 lipase/acylhydrolase, GDSL family K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D CLK_1969 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CLK_2709 AMP-binding protein K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D CLK_1833 plsX; fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D CLK_3387 plsD; glycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CLK_3618 putative 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:cbl01006]
D CLK_1273 putative geranyltranstransferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D CLK_1807 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CLK_0771 undecaprenyl pyrophosphate synthetase homolog K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CLK_1179 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
C 01007 Amino acid related enzymes [BR:cbl01007]
D CLK_0537 gltX; glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D CLK_2740 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CLK_0647 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CLK_2748 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D CLK_2948 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CLK_0517 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CLK_3251 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CLK_3274 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CLK_2560 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CLK_3364 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CLK_2983 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CLK_2447 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CLK_3803 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D CLK_0462 aspS; aspartate--tRNA ligase K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23]
D CLK_2448 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CLK_2982 glyS; glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D CLK_3722 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CLK_3156 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CLK_2761 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CLK_2950 putative prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CLK_2530 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CLK_1949 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CLK_2523 pheS; phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CLK_2522 pheT; phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CLK_1774 aspB; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CLK_1185 aspB; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CLK_0457 pyridoxal-phosphate-dependent aminotransferase family K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D CLK_2551 aminotransferase, classes I and II K10907 K10907; aminotransferase [EC:2.6.1.-]
D CLK_0842 hemolysin K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CLK_2141 aminotransferase, class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CLK_1504 2-aminoethylphosphonate--pyruvate transaminase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]
D CLK_0236 putative pleiotropic regulatory protein DegT K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
D CLK_2097 spore coat polysaccharide biosynthesis protein SpsC K13010 per; perosamine synthetase [EC:2.6.1.102]
C 00199 Cytochrome P450 [BR:cbl00199]
D CLK_0485 cytochrome P450 K15629 CYP152A; fatty-acid peroxygenase [EC:1.11.2.4]
C 00194 Photosynthesis proteins [BR:cbl00194]
D CLK_3332 atpC; ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D CLK_3331 atpD; ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D CLK_3330 atpG; ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D CLK_3329 atpA; ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D CLK_3328 atpH; ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D CLK_3327 atpF; ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D CLK_3326 atpE; ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D CLK_3325 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D CLK_3324 atpI; ATP synthase F0, I subunit K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:cbl03000]
D CLK_A0203 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D CLK_3043 transcriptional regulator, AraC family K18325 ramA; AraC family of transcriptional regulator, multidrug resistance transcriptional activator
D CLK_1766 transcriptional regulator, AraC family K13652 K13652; AraC family transcriptional regulator
D CLK_0114 transcriptional regulator, AraC family K13652 K13652; AraC family transcriptional regulator
D CLK_0790 AraC-family transcriptional regulator K13653 K13653; AraC family transcriptional regulator
D CLK_1545 transcriptional regulator, AraC family K13653 K13653; AraC family transcriptional regulator
D CLK_1616 transcriptional regulator, AraC family K13653 K13653; AraC family transcriptional regulator
D CLK_0316 transcriptional regulator, AraC family K13653 K13653; AraC family transcriptional regulator
D CLK_3813 transcriptional regulator, AraC family K13653 K13653; AraC family transcriptional regulator
D CLK_0131 transcriptional regulator, AraC family K13653 K13653; AraC family transcriptional regulator
D CLK_0420 putative transcriptional regulator, LysR family K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon
D CLK_1045 transcriptional regulator, LysR family K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon
D CLK_0714 transcriptional regulator, DeoR family K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D CLK_1649 transcriptional regulator, DeoR family K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D CLK_3337 spoIIID; stage III sporulation protein D K06283 spoIIID; putative DeoR family transcriptional regulator, stage III sporulation protein D
D CLK_A0223 spoIIID; sporulation transcriptional regulator SpoIIID K06283 spoIIID; putative DeoR family transcriptional regulator, stage III sporulation protein D
D CLK_A0305 putative stage III sporulation protein D K06283 spoIIID; putative DeoR family transcriptional regulator, stage III sporulation protein D
D CLK_1080 transcriptional regulator, DeoR family K22103 glcR; DeoR family transcriptional regulator, carbon catabolite repression regulator
D CLK_2327 CBS domain protein K23774 ccpN; DeoR family transcriptional regulator, catabolite repression regulator
D CLK_3275 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D CLK_1442 treR; trehalose operon repressor K03486 treR2; GntR family transcriptional regulator, trehalose operon transcriptional repressor
D CLK_2223 transcriptional regulator, GntR family K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D CLK_0534 transcriptional regulator, GntR family K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D CLK_0998 transcriptional regulator, GntR family K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D CLK_0035 transcriptional regulator, GntR family/aminotransferase K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D CLK_0300 transcriptional regulator, GntR family K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D CLK_2175 transcriptional regulator, GntR family K07979 ytrA; GntR family transcriptional regulator
D CLK_0991 transcriptional regulator, TetR family K09017 rutR; TetR/AcrR family transcriptional regulator
D CLK_0632 transcriptional regulator, TetR family K09017 rutR; TetR/AcrR family transcriptional regulator
D CLK_3736 transcriptional regulator, AsnC family K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D CLK_0251 HTH-type transcriptional regulator LrpC K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D CLK_0161 transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D CLK_1705 transcriptional regulator, MarR family K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D CLK_3250 transcriptional regulator, MarR family K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D CLK_1945 transcriptional regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D CLK_0814 putative ferric uptake regulatory protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D CLK_2231 ferric uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D CLK_3586 transcriptional regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D CLK_2617 transcriptional regulator, Fur family K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D CLK_0393 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D CLK_0779 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D CLK_0058 transcriptional regulator, Crp/Fnr family K21562 flp; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D CLK_0290 conserved domain protein K16326 yeiL; CRP/FNR family transcriptional regulator, putaive post-exponential-phase nitrogen-starvation regulator
D CLK_0468 cyclic nucleotide-binding domain protein K16326 yeiL; CRP/FNR family transcriptional regulator, putaive post-exponential-phase nitrogen-starvation regulator
D CLK_1028 cyclic nucleotide-binding domain protein K16326 yeiL; CRP/FNR family transcriptional regulator, putaive post-exponential-phase nitrogen-starvation regulator
D CLK_0613 rrf2 family protein K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor
D CLK_1954 rrF2 family protein K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor
D CLK_0166 putative arsenical resistance operon repressor ArsR K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D CLK_3685 putative cadmium resistance transcriptional regulator CadC K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D CLK_0024 cupin domain protein K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization
D CLK_3272 transcriptional regulator, PadR family K10947 K10947; PadR family transcriptional regulator
D CLK_1757 transcriptional regulator, PadR family K10947 K10947; PadR family transcriptional regulator
D CLK_1021 putative iron-dependent repressor K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D CLK_0077 blaI; penicillinase repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D CLK_0559 birA; birA bifunctional protein K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D CLK_0150 putative DNA-binding protein K22299 rghR; HTH-type transcriptional regulator, competence development regulator
D CLK_3016 purR; pur operon repressor K09685 purR; HTH-type transcriptional regulator, purine operon repressor
D CLK_1092 acoR; aco operon transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D CLK_1110 sensory box sigma-54 dependent transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D CLK_1394 aorR; aor transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D CLK_1106 sensory box sigma-54 dependent transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D CLK_2594 sigma-54 dependent transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D CLK_1463 putative sigma-54 dependent transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D CLK_3801 sigma-54 dependent transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D CLK_2722 rex; redox-sensing transcriptional repressor Rex K01926 rex; redox-sensing transcriptional repressor
D CLK_1813 codY; GTP-sensing transcriptional pleiotropic repressor CodY K03706 codY; transcriptional pleiotropic repressor
D CLK_3673 conserved hypothetical protein K07727 K07727; putative transcriptional regulator
D CLK_1593 conserved hypothetical protein K07727 K07727; putative transcriptional regulator
D CLK_0862 conserved hypothetical protein K07727 K07727; putative transcriptional regulator
D CLK_1738 putative DNA-binding protein K07729 K07729; putative transcriptional regulator
D CLK_0337 HTH DNA-binding protein K07729 K07729; putative transcriptional regulator
D CLK_3646 conserved domain protein K07729 K07729; putative transcriptional regulator
D CLK_A0193 conserved domain protein K07729 K07729; putative transcriptional regulator
D CLK_3781 DNA binding protein K07729 K07729; putative transcriptional regulator
D CLK_2434 putative DNA-binding protein K07729 K07729; putative transcriptional regulator
D CLK_2435 DNA-binding protein K07729 K07729; putative transcriptional regulator
D CLK_2829 conserved hypothetical protein K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI
D CLK_0055 licT; transcriptional antiterminator, LicT K03488 licT; beta-glucoside operon transcriptional antiterminator
D CLK_2140 transcriptional antiterminator, BglG family K03480 glcT; transcriptional antiterminator
D CLK_2224 transcriptional antiterminator, BglG family K03480 glcT; transcriptional antiterminator
D CLK_1557 conserved hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D CLK_0745 conserved hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D CLK_1983 conserved hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D CLK_3240 transcriptional regulator, AbrB family K06284 abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes
D CLK_3006 stage V sporulation protein T K04769 spoVT; AbrB family transcriptional regulator, stage V sporulation protein T
D CLK_3122 stage 0 sporulation protein J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CLK_3124 parB family protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CLK_2155 glpP; glycerol uptake operon antiterminator regulatory protein K02443 glpP; glycerol uptake operon antiterminator
D CLK_1268 argR; arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D CLK_2346 hrcA; heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D CLK_2959 ctsR; transciptional repressor CtsR K03708 ctsR; transcriptional regulator of stress and heat shock response
D CLK_3162 putative sensory box sigma-54 dependent transcriptional regulator K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport
D CLK_3407 transcriptional regulator, SorC family K05311 cggR; central glycolytic genes regulator
D CLK_0958 pyrR; pyrimidine operon regulatory protein/uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D CLK_2208 pyrR; pyrimidine operon regulatory protein/uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D CLK_1913 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D CLK_0934 mraZ; mraZ protein K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:cbl03021]
D CLK_3723 putative ATP-dependent helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D CLK_A0222 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D CLK_2895 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D CLK_2932 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CLK_2931 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CLK_1895 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D CLK_2322 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D CLK_A0007 RNA polymerase sigma-E factor K03086 rpoD; RNA polymerase primary sigma factor
D CLK_A0323 putative sporulation sigma factor SigK K03086 rpoD; RNA polymerase primary sigma factor
D CLK_0080 RNA polymerase sigma-70 factor family K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CLK_0241 RNA polymerase sigma-70 factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CLK_1750 RNA polymerase sigma-70 factor, ECF family K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CLK_3193 RNA polymerase sigma-70 factor family K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CLK_1915 sigG; RNA polymerase sigma-G factor K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D CLK_1916 sigE; RNA polymerase sigma-E factor K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D CLK_2480 sigF; RNA polymerase sigma-F factor K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D CLK_1924 RNA polymerase sigma-70 factor family K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D CLK_A0289 putative sigma K K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D CLK_A0290 putative RNA polymerase sigma factor K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D CLK_2943 sigH; RNA polymerase sigma-H factor K27000 sigH; RNA polymerase sigma-H factor
D CLK_3406 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D CLK_2029 fliA; RNA polymerase sigma factor for flagellar operon FliA K02405 fliA; RNA polymerase sigma factor FliA
D CLK_1797 nusA; N utilization substance protein A K02600 nusA; transcription termination/antitermination protein NusA
D CLK_1276 nusB; N utilization substance protein B K03625 nusB; transcription antitermination protein NusB
D CLK_2937 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
D CLK_2446 sigma-E factor regulator, RseC/MucC family K03803 rseC; sigma-E factor negative regulatory protein RseC
D CLK_2984 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D CLK_0083 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D CLK_3309 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:cbl03019]
D CLK_2374 ribonuclease, Rne/Rng family K08301 rng; ribonuclease G [EC:3.1.26.-]
D CLK_1831 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CLK_1944 RNA-metabolizing metallo-beta-lactamase family protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D CLK_0736 RNA-metabolising metallo-beta-lactamase K12574 rnj; ribonuclease J [EC:3.1.-.-]
D CLK_1779 HDIG/HD/KH domain protein K18682 rny; ribonucrease Y [EC:3.1.-.-]
D CLK_3414 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D CLK_2604 HDIG domain protein K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-]
D CLK_A0006 CMP-binding-factor 1 K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-]
D CLK_0036 rhlE; ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D CLK_2189 ATP-dependent RNA helicase, DEAD/DEAH box family K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CLK_1162 dbpA; ATP-dependent RNA helicase DbpA K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CLK_1160 ATP-dependent RNA helicase, DEAD/DEAH box family K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CLK_1464 ATP-dependent RNA helicase, DEAD/DEAH box family K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CLK_0440 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D CLK_3412 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CLK_1788 pnpA; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D CLK_3309 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D CLK_2805 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CLK_2344 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CLK_2714 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CLK_1178 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D CLK_2122 csrA; carbon storage regulator K03563 csrA; carbon storage regulator
D CLK_2809 conserved hypothetical protein K06958 rapZ; RNase adapter protein RapZ
C 03041 Spliceosome
C 03011 Ribosome [BR:cbl03011]
D CLK_A0291 ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D CLK_0594 rpsA; ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D CLK_1188 4-hydroxy-3-methylbut-2-enyl diphosphate reductase / ribosomal protein S1 homolog K02945 RP-S1; small subunit ribosomal protein S1
D CLK_1812 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D CLK_2918 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D CLK_2838 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D CLK_2896 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D CLK_2907 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D CLK_3112 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D CLK_2928 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D CLK_2910 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D CLK_2888 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D CLK_2925 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D CLK_2897 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D CLK_2929 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D CLK_2898 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D CLK_2911 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D CLK_1789 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D CLK_1825 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D CLK_2915 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D CLK_3110 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D CLK_2920 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D CLK_2352 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D CLK_2338 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D CLK_2935 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D CLK_2921 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D CLK_2924 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D CLK_2923 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D CLK_2912 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D CLK_2909 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D CLK_3106 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D CLK_2934 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D CLK_2936 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D CLK_2933 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D CLK_2889 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D CLK_2914 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D CLK_2905 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D CLK_2917 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D CLK_2894 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D CLK_2908 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D CLK_1821 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D CLK_2527 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D CLK_2373 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D CLK_2919 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D CLK_2922 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D CLK_2913 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D CLK_2371 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D CLK_1880 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D CLK_2916 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D CLK_2906 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D CLK_3310 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D CLK_1834 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D CLK_2939 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D CLK_3132 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D CLK_2528 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D CLK_2899 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D CLK_2510 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D CLK_2615 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D CLK_2930 ribosomal protein L7Ae family protein K07590 RP-L7A; large subunit ribosomal protein L7A
D CLK_3832 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLK_3848 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLK_3844 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLK_3836 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLK_3840 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLK_3946 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLK_3818 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLK_3871 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLK_3952 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLK_3867 rrs; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLK_3846 rrs; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLK_3949 rrs; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLK_3830 rrs; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLK_3834 rrs; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLK_3838 rrs; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLK_3842 rrs; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLK_3816 rrs; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLK_3954 rrs; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLK_3847 rrl; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLK_3817 rrl; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLK_3843 rrl; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLK_3839 rrl; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLK_3870 rrl; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLK_3953 rrl; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLK_3947 rrl; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLK_3835 rrl; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLK_3831 rrl; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:cbl03009]
D CLK_1831 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CLK_2330 era; GTP-binding protein Era K03595 era; GTPase
D CLK_2370 GTPase, Obg family K03979 obgE; GTPase [EC:3.6.5.-]
D CLK_1797 nusA; N utilization substance protein A K02600 nusA; transcription termination/antitermination protein NusA
D CLK_1276 nusB; N utilization substance protein B K03625 nusB; transcription antitermination protein NusB
D CLK_2937 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
D CLK_2690 RNA pseudouridine synthase family protein K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D CLK_3256 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D CLK_1889 sun; ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D CLK_1876 rsmD; RNA methyltransferase, RsmD family K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D CLK_2341 conserved hypothetical protein TIGR00046 K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D CLK_3125 gidB; 16S rRNA methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D CLK_0935 mraW; S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D CLK_3238 tetrapyrrole methylase family protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D CLK_1270 hemolysin A K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D CLK_2945 RNA methyltransferase, TrmH family, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D CLK_3039 conserved hypothetical protein K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D CLK_1888 radical SAM enzyme, Cfr family K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D CLK_2251 florfenicol/chloramphenicol resistance protein K15632 cfr; 23S rRNA (adenine-C8)-methyltransferase [EC:2.1.1.224]
D CLK_2801 rumA; 23S rRNA (uracil-5-)-methyltransferase RumA K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D CLK_1194 rluB; ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D CLK_0914 pseudouridine synthase, RluA family K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D CLK_2364 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D CLK_0957 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D CLK_2739 rimI; ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D CLK_3177 acetyltransferase, GNAT family K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
D CLK_1823 rimM; 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D CLK_1782 RNA modification enzyme, MiaB family K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D CLK_2342 prmA; ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D CLK_2374 ribonuclease, Rne/Rng family K08301 rng; ribonuclease G [EC:3.1.26.-]
D CLK_1947 conserved hypothetical protein TIGR00250 K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D CLK_2947 RNase3 domain protein K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-]
D CLK_2189 ATP-dependent RNA helicase, DEAD/DEAH box family K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CLK_1162 dbpA; ATP-dependent RNA helicase DbpA K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CLK_1160 ATP-dependent RNA helicase, DEAD/DEAH box family K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CLK_1464 ATP-dependent RNA helicase, DEAD/DEAH box family K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CLK_1885 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D CLK_1903 engA; ribosome-associated GTPase EngA K03977 engA; GTPase
D CLK_1819 GTP-binding protein K14540 rbgA; ribosome biogenesis GTPase A
D CLK_2473 GTP-binding protein K03665 hflX; GTPase
D CLK_3317 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D CLK_2452 putative GTP diphosphokinase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D CLK_1793 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D CLK_1798 conserved hypothetical protein K09748 rimP; ribosome maturation factor RimP
D CLK_3135 S4 domain protein K14761 rlbA; ribosome-associated protein
D CLK_2333 conserved hypothetical protein TIGR00043 K07042 ybeY; probable rRNA maturation factor
D CLK_2369 CRS1/YhbY domain protein K07574 yhbY; RNA-binding protein
D CLK_3350 yfiA; ribosomal subunit interface protein K05808 hpf; ribosome hibernation promoting factor
D CLK_0933 ychF; GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase
D CLK_1835 ribosomal protein L32 family protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:cbl03016]
D CLK_0817 rnz; ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D CLK_1753 polyA polymerase family protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D CLK_2761 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CLK_2950 putative prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CLK_3274 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CLK_3364 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CLK_3251 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CLK_0517 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CLK_2983 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CLK_2447 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CLK_1949 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CLK_3803 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D CLK_2982 glyS; glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D CLK_2530 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CLK_3722 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CLK_3156 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CLK_2948 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CLK_2560 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CLK_2448 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CLK_2523 pheS; phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CLK_2522 pheT; phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CLK_2740 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CLK_0647 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CLK_2748 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D CLK_2451 dtd; D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D CLK_2339 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D CLK_0755 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D CLK_3710 trmB; tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D CLK_1132 conserved hypothetical protein K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
D CLK_1369 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D CLK_2890 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D CLK_1791 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D CLK_0617 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CLK_1953 nifS; cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CLK_3317 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D CLK_1179 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D CLK_3127 trmE; tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D CLK_3126 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D CLK_2361 selD; selenide, water dikinase, selenocysteine-containing K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D CLK_3131 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D CLK_4008 Bacterial RNase P class A K01978 rnpB; M1 RNA
D CLK_2215 ligT; 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D CLK_0462 aspS; aspartate--tRNA ligase K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23]
D CLK_0537 gltX; glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D CLK_0988 conserved hypothetical protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
D CLK_3164 cytidine/deoxycytidylate deaminase family protein K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D CLK_2986 dihydrouridine synthase K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D CLK_1182 miaB; tRNA-i(6)A37 thiotransferase enzyme MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D CLK_2340 RNA modification enzyme, MiaB family K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D CLK_1822 trmD; tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D CLK_2320 conserved hypothetical protein K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217]
D CLK_3399 conserved hypothetical protein K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D CLK_3237 conserved hypothetical protein K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223]
D CLK_2524 RNA methyltransferase, TrmH family K03437 spoU; RNA methyltransferase, TrmH family
D CLK_0620 trmU-1; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D CLK_2298 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D CLK_3340 conserved hypothetical protein K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D CLK_2462 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D CLK_1036 exsB protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D CLK_0229 queD; queuosine biosynthesis protein QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D CLK_1033 queD; queuosine biosynthesis protein QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D CLK_1034 radical SAM domain protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D CLK_3386 iron-sulfur cluster-binding protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D CLK_2202 ncharacterized conserved protein K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6]
D CLK_2461 tgt; tRNA-guanine transglycosylase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D CLK_2991 tilS; tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D CLK_2738 glycoprotease family protein K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D CLK_2729 metalloendopeptidase, glycoprotease family K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D CLK_2737 conserved hypothetical protein TIGR00150 K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D CLK_3175 thiF domain protein K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D CLK_1872 conserved hypothetical protein K27343 tmcAL; tRNA(Met) cytidine acetate ligase [EC:6.3.4.-]
D CLK_3414 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D CLK_1788 pnpA; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:cbl03012]
D CLK_1794 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D CLK_2529 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D CLK_2723 putative drug resistance ABC transporter, ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D CLK_1811 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D CLK_2926 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D CLK_2940 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D CLK_2927 fusA; translation elongation factor G K02355 fusA; elongation factor G
D CLK_2961 fusA; translation elongation factor G K02355 fusA; elongation factor G
D CLK_2359 selB; selenocysteine-specific translation elongation factor K03833 selB; selenocysteine-specific elongation factor
D CLK_3314 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D CLK_1808 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D CLK_3313 prmC; protein-(glutamine-N5) methyltransferase, release factor-specific K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D CLK_3009 pth; aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D CLK_2900 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D CLK_1287 efp; translation elongation factor P K02356 efp; elongation factor P
D CLK_3352 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D CLK_2746 prfC; peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
C 03110 Chaperones and folding catalysts [BR:cbl03110]
D CLK_3600 clpB; clpB protein K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D CLK_2956 putative negative regulator of genetic competence MecB/ClpC K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D CLK_2628 clpX; ATP-dependent Clp protease, ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D CLK_1438 hsp90; heat shock protein K04079 HSP90A; molecular chaperone HtpG
D CLK_2344 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CLK_2714 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CLK_2343 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D CLK_3368 molecular chaperone, DnaJ family K03686 dnaJ; molecular chaperone DnaJ
D CLK_2540 hsp33; 33 kDa chaperonin K04083 hslO; molecular chaperone Hsp33
D CLK_2345 grpE; co-chaperone GrpE K03687 GRPE; molecular chaperone GrpE
D CLK_0233 heat shock protein K13993 HSP20; HSP20 family protein
D CLK_1141 heat shock protein K13993 HSP20; HSP20 family protein
D CLK_2715 groES; chaperonin, 10 kDa K04078 groES; chaperonin GroES
D CLK_3010 putative protease K04771 degP; serine protease Do [EC:3.4.21.107]
D CLK_2759 hflB; ATP-dependent metallopeptidase HflB K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CLK_2989 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CLK_3591 ATP-dependent metalloprotease K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CLK_A0273 putative Cell division protease FtsH homolog K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CLK_3325 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D CLK_0198 hydrogenase nickel incorporation protein K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D CLK_1659 hypA; hydrogenase nickel insertion protein HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D CLK_1660 hypB; hydrogenase accessory protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB
D CLK_0196 hypB; hydrogenase accessory protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB
D CLK_3635 hypB; hydrogenase accessory protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB
D CLK_3031 putative peptidyl-prolyl cis-trans isomerase, cyclophilin-type K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D CLK_3007 putative peptidyl-prolyl cis-trans isomerase K07533 prsA; foldase protein PrsA [EC:5.2.1.8]
D CLK_3214 peptidil-prolyl isomerase family protein K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D CLK_2877 trx; thioredoxin K03671 TXN; thioredoxin
D CLK_1202 thioredoxin family protein K03671 TXN; thioredoxin
D CLK_0700 thioredoxin family protein K03671 TXN; thioredoxin
D CLK_0692 glutaredoxin-like protein, YruB-family K03676 grxC; glutaredoxin 3
C 04131 Membrane trafficking [BR:cbl04131]
D CLK_3408 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CLK_2804 pykA; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CLK_1438 hsp90; heat shock protein K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system [BR:cbl04121]
C 03051 Proteasome [BR:cbl03051]
D CLK_1438 hsp90; heat shock protein K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:cbl03032]
D CLK_3593 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D CLK_A0203 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D CLK_3003 hup; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D CLK_3133 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D CLK_3104 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D CLK_A0285 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D CLK_3082 dnaC family protein K02315 dnaC; DNA replication protein DnaC
D CLK_2432 putative ATP-binding protein K02315 dnaC; DNA replication protein DnaC
D CLK_A0286 conserved hypothetical protein K02315 dnaC; DNA replication protein DnaC
D CLK_2323 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D CLK_A0191 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D CLK_A0151 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CLK_3111 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CLK_A0114 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CLK_1349 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein
D CLK_3583 single-strand binding domain protein K03111 ssb; single-strand DNA-binding protein
D CLK_2806 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CLK_1799 polC; DNA polymerase III, alpha subunit, Gram-positive type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D CLK_3134 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CLK_A0115 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CLK_2353 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CLK_A0161 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CLK_3233 putative DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CLK_3433 exonuclease, DNA polymerase III, epsilon subunit family K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CLK_A0158 dnaX; DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CLK_3165 dnaX; DNA polymerase III, gamma and tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CLK_1818 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D CLK_2397 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CLK_2687 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CLK_3139 gyrA; DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D CLK_3138 gyrB; DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D CLK_2156 DNA topoisomerase, GyrA/ParC subunit family K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D CLK_2157 DNA topoisomerase, GyrB/ParE subunit family K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D CLK_1814 topA; DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D CLK_0985 DNA topoisomerase K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
D CLK_0731 topB; DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
D CLK_A0001 type I topoisomease K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:cbl03036]
D CLK_A0203 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D CLK_1831 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CLK_3003 hup; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D CLK_3133 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D CLK_1178 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D CLK_0251 HTH-type transcriptional regulator LrpC K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D CLK_1829 smc; chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D CLK_1243 scpA; segregation and condensation protein A K05896 scpA; segregation and condensation protein A
D CLK_1242 scpB; segregation and condensation protein B K06024 scpB; segregation and condensation protein B
D CLK_1919 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D CLK_2999 putative cell division protein FtsL K13052 divIC; cell division protein DivIC
D CLK_2823 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D CLK_A0019 methionine import ATP-binding protein MetN 2 K09812 ftsE; cell division transport system ATP-binding protein
D CLK_1783 putative stage III sporulation protein E K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D CLK_0936 cell division protein FtsL homolog K03586 ftsL; cell division protein FtsL
D CLK_0942 cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D CLK_0941 cell cycle protein, FtsW/RodA/SpoVE family K03588 ftsW; cell division protein FtsW
D CLK_2822 efflux ABC transporter, permease protein, FtsX family K09811 ftsX; cell division transport system permease protein
D CLK_A0018 efflux ABC transporter, permease protein K09811 ftsX; cell division transport system permease protein
D CLK_1918 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D CLK_2521 conserved hypothetical protein K09888 zapA; cell division protein ZapA
D CLK_2886 cwlD; N-acetylmuramoyl-L-alanine amidase CwlD K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLK_2504 putative N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLK_2505 putative N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLK_0913 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLK_0907 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLK_2399 putative N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLK_2382 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D CLK_2381 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D CLK_2380 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D CLK_0950 putative septum site-determining protein divIVA K04074 divIVA; cell division initiation protein
D CLK_0947 conserved hypothetical protein K09772 sepF; cell division inhibitor SepF
D CLK_3338 mbl; Mbl protein K03569 mreB; rod shape-determining protein MreB and related proteins
D CLK_2386 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D CLK_2385 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D CLK_2384 mreD; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D CLK_0013 rodA; rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D CLK_2379 rodA; rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D CLK_3123 soj; sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein
D CLK_3122 stage 0 sporulation protein J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CLK_3124 parB family protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CLK_2156 DNA topoisomerase, GyrA/ParC subunit family K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D CLK_2157 DNA topoisomerase, GyrB/ParE subunit family K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D CLK_3126 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D CLK_3125 gidB; 16S rRNA methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D CLK_1251 xerD; tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D CLK_0858 XerC/D integrase-recombinase protein K04763 xerD; integrase/recombinase XerD
D CLK_0861 site-specific recombinase, phage integrase family K04763 xerD; integrase/recombinase XerD
D CLK_1309 site-specific recombinase K04763 xerD; integrase/recombinase XerD
D CLK_1173 site-specific recombinase, phage integrase family K04763 xerD; integrase/recombinase XerD
D CLK_2778 site-specific recombinase, phage integrase family K04763 xerD; integrase/recombinase XerD
D CLK_3004 MazG family protein K02499 yabN; tetrapyrrole methylase family protein / MazG family protein
D CLK_3263 MRP protein homolog K03593 mrp; ATP-binding protein involved in chromosome partitioning
D CLK_2625 GTP-binding protein K03978 engB; GTP-binding protein
D CLK_2807 conserved hypothetical protein K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:cbl03400]
D CLK_1012 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D CLK_0705 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D CLK_2719 putative 8-oxoguanine DNA glycosylase K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
D CLK_3388 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D CLK_3723 putative ATP-dependent helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D CLK_0054 putative mutator mutT protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D CLK_0676 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D CLK_3185 uracil-DNA glycosylase family protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D CLK_3249 udgA; uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D CLK_0034 conserved domain protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D CLK_0062 methyladenine glycosylase family protein K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D CLK_0961 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CLK_2150 AP endonuclease, family 2 K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D CLK_2149 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CLK_2687 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CLK_2397 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CLK_2818 uvrA; excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D CLK_2796 uvrA; excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D CLK_1765 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D CLK_2819 uvrB; excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B
D CLK_2812 uvrC; excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D CLK_2602 GIY-YIG domain protein K03703 uvrC; excinuclease ABC subunit C
D CLK_0763 helicase, UvrD/REP/exonuclease family protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CLK_2688 pcrA; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CLK_2758 conserved hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CLK_A0064 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CLK_0857 helicase, UvrD/REP family K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CLK_2297 putative helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CLK_2932 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CLK_2931 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CLK_A0222 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D CLK_2895 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D CLK_1895 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D CLK_3008 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D CLK_1181 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D CLK_2516 MutS2 family protein K07456 mutS2; DNA mismatch repair protein MutS2
D CLK_0027 MutS domain protein K07456 mutS2; DNA mismatch repair protein MutS2
D CLK_1180 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D CLK_1275 xseA; exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D CLK_1274 xseB; exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D CLK_2806 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CLK_1799 polC; DNA polymerase III, alpha subunit, Gram-positive type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D CLK_3134 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CLK_A0115 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CLK_2353 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CLK_A0161 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CLK_3233 putative DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CLK_3433 exonuclease, DNA polymerase III, epsilon subunit family K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CLK_A0158 dnaX; DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CLK_3165 dnaX; DNA polymerase III, gamma and tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CLK_A0151 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CLK_3111 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CLK_A0114 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CLK_1349 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein
D CLK_3583 single-strand binding domain protein K03111 ssb; single-strand DNA-binding protein
D CLK_3347 helicase, RecD/TraA family K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D CLK_1780 recA; recA protein K03553 recA; recombination protein RecA
D CLK_2464 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D CLK_2463 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D CLK_1893 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D CLK_3676 sbcC; exonuclease SbcCD, C subunit K03546 sbcC; DNA repair protein SbcC/Rad50
D CLK_3675 sbcD; exonuclease SbcCD, D subunit K03547 sbcD; DNA repair protein SbcD/Mre11
D CLK_2955 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D CLK_3136 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D CLK_1877 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CLK_A0002 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CLK_3167 recR; recombination protein RecR K06187 recR; recombination protein RecR
D CLK_1267 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D CLK_3638 addA; ATP-dependent nuclease subunit A K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D CLK_3628 addB; ATP-dependent nuclease subunit B K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D CLK_3139 gyrA; DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D CLK_3138 gyrB; DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D CLK_1814 topA; DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D CLK_3003 hup; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D CLK_1352 RecT family protein K07455 recT; recombination protein RecT
D CLK_1934 recombinase, phage RecT family K07455 recT; recombination protein RecT
D CLK_0440 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D CLK_2205 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D CLK_1175 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D CLK_2573 recX; regulatory protein RecX K03565 recX; regulatory protein
D CLK_2201 nrdA; ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CLK_2200 nrdB; ribonucleoside-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D CLK_1792 DHH family protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:cbl03029]
D CLK_1794 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D CLK_2529 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D CLK_1811 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D CLK_2926 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D CLK_2940 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D CLK_2927 fusA; translation elongation factor G K02355 fusA; elongation factor G
D CLK_2961 fusA; translation elongation factor G K02355 fusA; elongation factor G
D CLK_0809 helicase domain protein K17675 SUPV3L1; ATP-dependent RNA helicase SUPV3L1/SUV3 [EC:5.6.2.6]
D CLK_2330 era; GTP-binding protein Era K03595 era; GTPase
D CLK_2740 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CLK_0647 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CLK_3364 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CLK_2447 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CLK_2982 glyS; glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D CLK_0517 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CLK_2683 gatA; glutamyl-tRNA(Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D CLK_2682 gatB; glutamyl-tRNA(Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D CLK_2684 gatC; glutamyl-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D CLK_A0151 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CLK_3111 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CLK_A0114 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CLK_1349 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein
D CLK_3583 single-strand binding domain protein K03111 ssb; single-strand DNA-binding protein
D CLK_2344 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CLK_2345 grpE; co-chaperone GrpE K03687 GRPE; molecular chaperone GrpE
D CLK_2714 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CLK_2715 groES; chaperonin, 10 kDa K04078 groES; chaperonin GroES
D CLK_2343 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D CLK_3368 molecular chaperone, DnaJ family K03686 dnaJ; molecular chaperone DnaJ
D CLK_0617 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CLK_1953 nifS; cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CLK_3263 MRP protein homolog K03593 mrp; ATP-binding protein involved in chromosome partitioning
D CLK_3129 putative sporulation protein/membrane protein insertase, OxaA family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CLK_1438 hsp90; heat shock protein K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:cbl02000]
D CLK_0497 ABC transporter ATP-binding/permease protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D CLK_1729 putative ABC transporter, ATP-binding/permease protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D CLK_0498 ABC transport ATP-binding/permease protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D CLK_1064 ABC transporter ATP-binding/permease protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D CLK_1728 ABC transporter, ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D CLK_0162 multidrug resistance ABC transporter ATP-binding and permease protein K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2]
D CLK_1412 ABC transporter, ATP-binding/permease protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D CLK_1388 putative ABC transporter, ATP-binding/permease protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D CLK_1411 putative ABC transporter, ATP-binding/permease protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D CLK_1387 ABC transporter, ATP-binding/permease protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D CLK_3504 lipid A export ATP-binding/permease protein MsbA K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D CLK_0749 ABC transporter, ATP-binding protein/permease protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D CLK_3682 ABC transporter CbaT K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
D CLK_3763 ABC transporter, ATP-binding protein K18231 msr; macrolide transport system ATP-binding/permease protein
D CLK_2252 drug resistance ABC transporter, RA2 family, ATP-binding protein K19350 lsa; lincosamide and streptogramin A transport system ATP-binding/permease protein
D CLK_0509 drug resistance ABC transporter, ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein
D CLK_0403 putative anion ABC transporter, solute-binding protein K02020 modA; molybdate transport system substrate-binding protein
D CLK_0964 modA; molybdate ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D CLK_0965 modB; molybdate ABC transporter, permease protein K02018 modB; molybdate transport system permease protein
D CLK_0404 putative anion ABC transporter, permease protein K02018 modB; molybdate transport system permease protein
D CLK_0966 putative molybdate ABC transporter, ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D CLK_1403 tupA; tungstate ABC transporter, tungstate-binding protein K05772 tupA; tungstate transport system substrate-binding protein
D CLK_1402 putative tungstate ABC transporter, permease protein TupB K05773 tupB; tungstate transport system permease protein
D CLK_1401 putative tungstate ABC transporter, ATP-binding protein TupC K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6]
D CLK_0588 ABC transporter, substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D CLK_0589 ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein
D CLK_0590 ABC transporter, ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D CLK_3773 potCD; spermidine/putrescine transport system permease protein PotC/spermidine/putrescine-binding periplasmic protein PotD K11069 potD; spermidine/putrescine transport system substrate-binding protein
D CLK_3772 potB; spermidine/putrescine ABC transporter, permease protein PotB K11071 potB; spermidine/putrescine transport system permease protein
D CLK_3771 potA; spermidine/putrescine ABC transporter, ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D CLK_0549 putative ABC transporter, solute-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D CLK_0551 ABC transporter, permease protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D CLK_0550 ABC transporter, permease protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D CLK_0552 ABC transporter, ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D CLK_1101 glycine betaine/L-proline ABC transporter, permease/glycine betaine/L-proline-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D CLK_1100 glycine betaine/L-proline ABC transporter, ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D CLK_0811 putative lipoprotein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D CLK_2567 periplasmic binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D CLK_2650 putative lipoprotein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D CLK_0812 putative ABC transporter, permease protein K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D CLK_2570 ABC transporter, permease protein K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D CLK_2647 ABC transporter, permease protein K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D CLK_0813 ABC transporter, ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D CLK_2569 ABC transporter, ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D CLK_2645 ABC transporter, ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D CLK_3479 ABC transporter, carbohydrate uptake transporter-1 (CUT1) family, ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D CLK_0993 carbohydrate uptake ABC transporter, CUT1 family, ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D CLK_0712 D-ribose-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D CLK_0710 ribose transport system permease protein RbsC K10440 rbsC; ribose transport system permease protein
D CLK_0709 ribose import ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D CLK_3401 lipoprotein, bmp family K07335 bmpA; basic membrane protein A and related proteins
D CLK_3403 sugar ABC transporter, permease protein K23535 nupB; general nucleoside transport system permease protein
D CLK_3404 sugar ABC transporter, permease protein K23536 nupC; general nucleoside transport system permease protein
D CLK_3402 sugar ABC transporter, ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D CLK_3475 sugar ABC transporter, sugar-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D CLK_3282 putative arabinose-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D CLK_0996 carbohydrate uptake ABC transporter, CUT1 family, carbohydrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D CLK_0711 hypothetical protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D CLK_0994 carbohydrate uptake ABC transporter, CUT1 family, permease protein K02025 ABC.MS.P; multiple sugar transport system permease protein
D CLK_3476 binding-protein-dependent transport systems inner membrane component K02025 ABC.MS.P; multiple sugar transport system permease protein
D CLK_0995 carbohydrate uptake ABC transporter, CUT1 family, permease protein K02026 ABC.MS.P1; multiple sugar transport system permease protein
D CLK_3477 binding-protein-dependent transport systems inner membrane component K02026 ABC.MS.P1; multiple sugar transport system permease protein
D CLK_1909 pstS; phosphate ABC transporter, phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D CLK_3574 phosphate uptake ABC transporter, PhoT family, phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D CLK_1908 pstC; phosphate ABC transporter, permease protein PstC K02037 pstC; phosphate transport system permease protein
D CLK_3575 phosphate uptake ABC transporter, PhoT family, permease protein K02037 pstC; phosphate transport system permease protein
D CLK_1907 pstA; phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein
D CLK_3576 phosphate uptake ABC transporter, PhoT family, permease protein K02038 pstA; phosphate transport system permease protein
D CLK_1906 pstB; phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D CLK_3577 phosphate uptake ABC transporter, PhoT family, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D CLK_1471 polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D CLK_1470 amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family K17077 artQ; arginine/lysine/histidine transport system permease protein
D CLK_1469 polar amino acid uptake family ABC transporter, PAAT family, ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D CLK_3657 putative high-affinity branched-chain amino acid ABC transporter, amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CLK_3658 high-affinity branched-chain amino acid ABC transporter, permease protein K01997 livH; branched-chain amino acid transport system permease protein
D CLK_3659 putative high-affinity branched-chain amino acid ABC transporter, permease protein K01998 livM; branched-chain amino acid transport system permease protein
D CLK_3660 putative high-affinity branched chain amino acid ABC transporter, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CLK_3661 putative high-affinity branched chain amino acid ABC transporter, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D CLK_0529 lipoprotein, NLPA family K02073 metQ; D-methionine transport system substrate-binding protein
D CLK_0530 lipoprotein, NLPA family K02073 metQ; D-methionine transport system substrate-binding protein
D CLK_0980 lipoprotein, NLPA family K02073 metQ; D-methionine transport system substrate-binding protein
D CLK_0528 methionine ABC transporter, MUT family, permease protein K02072 metI; D-methionine transport system permease protein
D CLK_0979 methionine ABC transporter, MUT family, permease protein K02072 metI; D-methionine transport system permease protein
D CLK_0527 methionine ABC transporter, MUT family, ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D CLK_0978 methionine ABC transporter, MUT family, ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D CLK_0076 putative ABC transporter, substrate-binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D CLK_0597 putative ABC transporter, substrate-binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D CLK_0598 ABC transporter, permease protein K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D CLK_0074 ABC transporter, permease protein K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D CLK_0599 ABC transporter, ATP-binding protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D CLK_0075 ABC transporter, ATP-binding protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D CLK_0616 polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein K16961 yxeM; putative S-methylcysteine transport system substrate-binding protein
D CLK_0843 amino acid ABC transporter, amino acid-binding protein K16961 yxeM; putative S-methylcysteine transport system substrate-binding protein
D CLK_0615 amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family K16962 yxeN; putative S-methylcysteine transport system permease protein
D CLK_0844 amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family K16962 yxeN; putative S-methylcysteine transport system permease protein
D CLK_0845 polar amino acid uptake family ABC transporter, PAAT family, ATP-binding protein K16963 yxeO; putative S-methylcysteine transport system ATP-binding protein
D CLK_3649 polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D CLK_0854 polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D CLK_3648 amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family K02029 ABC.PA.P; polar amino acid transport system permease protein
D CLK_3622 polar amino acid uptake family ABC transporter, PAAT family, ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D CLK_2547 oligopeptide/dipeptide ABC transporter, oligopeptide/dipeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D CLK_2681 bacterial extracellular solute-binding protein, family 5 K15580 oppA; oligopeptide transport system substrate-binding protein
D CLK_2546 oligopeptide/dipeptide ABC transporter, permease protein K15581 oppB; oligopeptide transport system permease protein
D CLK_2545 oligopeptide/dipeptide ABC transporter, permease protein K15582 oppC; oligopeptide transport system permease protein
D CLK_2544 oligopeptide/dipeptide ABC transporter, ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D CLK_2543 oligopeptide/dipeptide ABC transporter, ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D CLK_0668 putative oligopeptide ABC transporter, oligopeptide-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CLK_1134 peptide/opine/nickel uptake ABC transporter, PepT family, substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CLK_0215 methyl-accepting chemotaxis protein/bacterial extracellular solute-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CLK_0799 peptide/opine/nickel uptake ABC transporter, PepT family, substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CLK_0044 nickel transport system permease protein NikB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CLK_0667 putative oligopeptide ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CLK_1135 peptide/opine/nickel uptake ABC transporter, PepT family, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CLK_0800 peptide/opine/nickel uptake ABC transporter, PepT family, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CLK_0043 glutathione transport system permease protein GsiD K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CLK_0666 putative oligopeptide ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CLK_1136 peptide/opine/nickel uptake ABC transporter, PepT family, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CLK_0801 peptide/opine/nickel uptake ABC transporter, PepT family, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CLK_0042 dipeptide transport ATP-binding protein DppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CLK_0802 peptide/opine/nickel uptake ABC transporter, PepT family, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CLK_1137 ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CLK_3500 iron compound ABC transporter, iron compound-binding protein K25308 fhuD; ferric hydroxamate/heme transport system substrate-binding protein
D CLK_0088 fhuB; ferrichrome transport system permease protein FhuB K25288 fhuB; ferric hydroxamate/heme transport system permease protein
D CLK_3501 ferrichrome transport system permease protein FhuB K25288 fhuB; ferric hydroxamate/heme transport system permease protein
D CLK_0089 fhuG; ferrichrome transport system permease protein FhuG K25289 fhuG; ferric hydroxamate/heme transport system permease protein
D CLK_3502 ferrichrome transport system permease protein FhuG K25289 fhuG; ferric hydroxamate/heme transport system permease protein
D CLK_3503 ferrichrome transport ATP-binding protein FhuC K25290 fhuA; ferric hydroxamate/heme transport system ATP-binding protein [EC:7.2.2.16]
D CLK_0090 fhuC; ferrichrome transport ATP-binding protein FhuC K25290 fhuA; ferric hydroxamate/heme transport system ATP-binding protein [EC:7.2.2.16]
D CLK_0495 iron chelate uptake ABC transporter, FeCT family, solute-binding protein K25282 yclQ; iron-siderophore transport system substrate-binding protein
D CLK_0493 iron chelate uptake ABC transporter, FeCT family, permease protein K25283 yclO; iron-siderophore transport system permease protein
D CLK_0492 iron chelate uptake ABC transporter, FeCT family, permease protein K25284 yclN; iron-siderophore transport system permease protein
D CLK_0494 iron chelate uptake ABC transporter, FeCT family, ATP-binding protein K25285 yclP; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-]
D CLK_3495 iron chelate uptake ABC transporter, FeCT family, solute-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D CLK_0066 putative iron ABC transporter, iron-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D CLK_0087 ABC transporter, iron chelate uptake transporter FeCT family, periplasmic-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D CLK_0415 putative iron chelate uptake ABC transporter, solute-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D CLK_2291 putative iron chelate uptake ABC transporter, solute-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D CLK_3496 iron chelate uptake ABC transporter, FeCT family, permease protein K02015 ABC.FEV.P; iron complex transport system permease protein
D CLK_0067 Fe uptake system integral membrane protein K02015 ABC.FEV.P; iron complex transport system permease protein
D CLK_0414 iron chelate uptake ABC transporter, FeCT family, permease protein K02015 ABC.FEV.P; iron complex transport system permease protein
D CLK_2289 iron chelate uptake ABC transporter, FeCT family, permease protein K02015 ABC.FEV.P; iron complex transport system permease protein
D CLK_3497 iron chelate uptake ABC transporter, FeCT family, ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D CLK_0068 iron chelate uptake ABC transporter, FeCT family, ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D CLK_0413 iron chelate uptake ABC transporter, FeCT family, ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D CLK_2290 putative iron chelate uptake ABC transporter, FeCT family, ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D CLK_0781 iron chelate uptake ABC transporter, FeCT family, solute-binding protein K25034 btuF; cobalamin transport system substrate-binding protein
D CLK_0782 iron chelate uptake ABC transporter, FeCT family, permease protein K25027 btuC; cobalamin transport system permease protein
D CLK_0783 iron chelate uptake ABC transporter, FeCT family, ATP-binding protein K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8]
D CLK_0807 periplasmic solute binding protein family K09815 znuA; zinc transport system substrate-binding protein
D CLK_0805 putative metal ion ABC transporter, permease protein K09816 znuB; zinc transport system permease protein
D CLK_0806 putative metal ion ABC transporter, ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D CLK_0355 cbiN; cobalt transport protein K02009 cbiN; cobalt/nickel transport protein
D CLK_0356 cbiQ; cobalt ABC transporter, permease protein CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D CLK_0354 cbiM; cobalamin biosynthesis protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein
D CLK_1703 BioY family protein K03523 bioY; biotin transport system substrate-specific component
D CLK_0343 BioY family protein K03523 bioY; biotin transport system substrate-specific component
D CLK_1528 putative membrane protein K16926 htsT; energy-coupling factor transport system substrate-specific component
D CLK_1527 putative ABC transporter, permease protein K16785 ecfT; energy-coupling factor transport system permease protein
D CLK_1425 putative ABC transporter, permease protein K16785 ecfT; energy-coupling factor transport system permease protein
D CLK_2891 cobalt transport permease, CbiQ family K16785 ecfT; energy-coupling factor transport system permease protein
D CLK_2893 putative cobalt ABC transporter, ATP-binding protein K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D CLK_2892 putative cobalt ABC transporter, ATP-binding protein K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D CLK_1526 ABC transporter, ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D CLK_1426 ABC transporter, ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D CLK_1427 putative ABC transporter K16925 ykoE; energy-coupling factor transport system permease protein
D CLK_2735 manganese/zinc/iron chelate uptake ABC transporter, Mzt family, substrate-binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein
D CLK_1678 putative sodium extrusion protein NatB K09696 natB; sodium transport system permease protein
D CLK_1679 putative sodium extrusion ATP-binding protein NatA K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D CLK_1050 putative lantibiotic ABC transporter, permease protein K20491 nisE; lantibiotic transport system permease protein
D CLK_1051 putative lantibiotic ABC transporter, permease protein K20492 nisG; lantibiotic transport system permease protein
D CLK_1049 antibiotic ABC transporter, ATP-binding protein K20490 nisF; lantibiotic transport system ATP-binding protein
D CLK_0824 putative membrane protein K25142 lnrN; linearmycin/streptolysin S transport system permease protein
D CLK_3705 sagI; drug ABC tranporter, ATP-binding/permease protein K25142 lnrN; linearmycin/streptolysin S transport system permease protein
D CLK_0823 putative ABC transporter, permease protein K25143 lnrM; linearmycin/streptolysin S transport system permease protein
D CLK_3704 sagH; ABC transporter, ATP-binding/permease protein SagH K25143 lnrM; linearmycin/streptolysin S transport system permease protein
D CLK_3703 sagG; ABC transporter, ATP-binding protein SagG K25144 lnrL; linearmycin/streptolysin S transport system ATP-binding protein
D CLK_0822 ABC transporter, ATP-binding protein K25144 lnrL; linearmycin/streptolysin S transport system ATP-binding protein
D CLK_1732 putative membrane protein K19310 bcrB; bacitracin transport system permease protein
D CLK_1733 antibiotic ABC transporter, ATP-binding protein K19309 bcrA; bacitracin transport system ATP-binding protein
D CLK_0834 peptide ABC transporter, Pep4E family, permease protein K11632 bceB; bacitracin transport system permease protein
D CLK_0833 peptide ABC transporter, Pep4E family, ATP-binding protein K11631 bceA; bacitracin transport system ATP-binding protein
D CLK_3511 peptide ABC transporter, Pep4E family, permease protein K11636 yxdM; putative ABC transport system permease protein
D CLK_0839 peptide ABC transporter, Pep4E family, permease protein K11636 yxdM; putative ABC transport system permease protein
D CLK_3510 peptide ABC transporter, Pep4E family, ATP-binding protein K11635 yxdL; putative ABC transport system ATP-binding protein
D CLK_0838 peptide ABC transporter, Pep4E family, ATP-binding protein K11635 yxdL; putative ABC transport system ATP-binding protein
D CLK_2173 ABC transporter, permease protein K16919 ytrC_D; acetoin utilization transport system permease protein
D CLK_2174 ABC transporter, ATP-binding protein K16921 ytrB; acetoin utilization transport system ATP-binding protein
D CLK_2822 efflux ABC transporter, permease protein, FtsX family K09811 ftsX; cell division transport system permease protein
D CLK_A0018 efflux ABC transporter, permease protein K09811 ftsX; cell division transport system permease protein
D CLK_2823 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D CLK_A0019 methionine import ATP-binding protein MetN 2 K09812 ftsE; cell division transport system ATP-binding protein
D CLK_0127 putative drug resistance ABC-2 type transporter, permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D CLK_0628 putative membrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D CLK_2766 putative membrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D CLK_0047 ABC transporter, permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D CLK_1517 ABC transporter, permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D CLK_1731 putative membrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D CLK_3769 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CLK_0649 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CLK_1518 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CLK_0046 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CLK_0182 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CLK_0126 ABC Transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CLK_0173 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CLK_0262 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CLK_1230 daunorubicin resistance ATP-binding protein DrrA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CLK_2767 putative bacitracin transport ATP-binding protein BcrA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CLK_2534 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CLK_1385 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CLK_1602 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CLK_0627 bcrA; bacitracin ABC transporter, ATP-binding protein BcrA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CLK_0409 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CLK_3436 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CLK_1408 ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D CLK_3794 putative ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D CLK_0340 ABC transporter, ATP-binding/permease protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CLK_0188 putative ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D CLK_3262 putative macrolide efflux ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D CLK_0990 efflux ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D CLK_1604 ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D CLK_3462 peptide ABC transporter, Pep4E family, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D CLK_2566 ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D CLK_1603 ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D CLK_0399 efflux ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D CLK_3692 membrane-spanning protein K02004 ABC.CD.P; putative ABC transport system permease protein
D CLK_0110 ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D CLK_1605 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CLK_3261 putative macrolide efflux ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CLK_3691 macrolide export ATP-binding/permease protein MacB K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CLK_0989 peptide ABC transporter, Pep4E family, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CLK_0187 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CLK_1407 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CLK_3795 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CLK_2565 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CLK_0398 macrolide export ATP-binding/permease protein MacB K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CLK_0108 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CLK_3461 peptide ABC transporter, Pep4E family, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CLK_2229 ABC transporter, ATP-binding protein K09013 sufC; Fe-S cluster assembly ATP-binding protein
D CLK_1236 transporter, monovalent cation:proton antiporter-2 (CPA2) family K23994 SLC9B1_2; solute carrier family 9B (sodium/hydrogen exchanger), member 1/2
D CLK_3547 MATE efflux family protein K26939 norM; MATE family, multidrug efflux pump
D CLK_3248 MATE efflux family protein K26939 norM; MATE family, multidrug efflux pump
D CLK_2232 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D CLK_1404 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D CLK_1580 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D CLK_2227 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D CLK_2166 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D CLK_1966 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D CLK_0546 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D CLK_3498 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D CLK_1076 major facilitator family transporter K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter
D CLK_1581 transporter, major facilitator family K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D CLK_0516 glpT; glycerol-3-phosphate transporter K02445 glpT; MFS transporter, OPA family, glycerol-3-phosphate transporter
D CLK_2881 ptsI; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D CLK_1773 ptsH; phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D CLK_3458 PTS system, glucose family, EIIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CLK_3483 PTS system, glucose family, IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CLK_3466 PTS system, glucose/glucoside family, IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CLK_0770 ptsG; PTS system, glucose-specific, IIABC component K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D CLK_2139 PTS system, glucose family, IIABC component K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D CLK_2226 nagE; PTS system, N-acetylglucosamine-specific, IIBC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D CLK_3455 PTS system, maltose/glucose-specfic, IIBC component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D CLK_3481 PTS system, glucose/maltose-specfic, IIBC component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D CLK_1068 PTS system, glucose/glucoside family, IIBC component K20108 malT; maltose PTS system EIICB or EIICBA component [EC:2.7.1.208]
D CLK_0788 phosphotransferase system domain protein K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D CLK_0056 PTS system, beta-glucoside-specific, IIABC component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D CLK_1440 treP; PTS system, trehalose-specific IIBC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D CLK_3464 PTS system, glucose/glucoside family, IIBC component K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-]
D CLK_2772 PTS system, lactose/cellobiose-specific family, IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D CLK_2773 PTS system, lactose/cellobiose-specific family, IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D CLK_2775 PTS system, lactose/cellobiose family, IIC component K02761 celB; cellobiose PTS system EIIC component
D CLK_2857 PTS system, glucitol/sorbitol-specific, IIA component K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D CLK_2858 PTS system, glucitol/sorbitol-specific, IIBC component K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D CLK_2859 PTS system, glucitol/sorbitol-specific, IIC component K02783 srlA; glucitol/sorbitol PTS system EIIC component
D CLK_1610 putative PTS system, L-ascorbate family, IIA component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D CLK_1609 putative PTS system, L-Ascorbate family, IIB component K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D CLK_1608 putative PTS system, L-ascorbate family, IIC component K03475 ulaA; ascorbate PTS system EIIC component
D CLK_2170 glpF; glycerol uptake facilitator protein K02440 glpF; glycerol uptake facilitator
D CLK_0394 formate/nitrite transporter family protein K02598 nirC; nitrite transporter
D CLK_3764 mscL; large conductance mechanosensitive channel protein K03282 mscL; large conductance mechanosensitive channel
D CLK_3115 mechanosensitive ion channel family protein K22044 ybiO; moderate conductance mechanosensitive channel
D CLK_0565 mgtE; magnesium transporter K06213 mgtE; magnesium transporter
D CLK_1667 putative chemotaxis protein MotA K02556 motA; chemotaxis protein MotA
D CLK_2040 motA; chemotaxis protein MotA K02556 motA; chemotaxis protein MotA
D CLK_2039 motB; chemotaxis protein MotB K02557 motB; chemotaxis protein MotB
D CLK_1666 putative chemotaxis MotB protein K02557 motB; chemotaxis protein MotB
D CLK_1991 putative magnesium and cobalt transport protein CorA K03284 corA; magnesium transporter
D CLK_3226 transporter, CorA metal ion transporter family K03284 corA; magnesium transporter
D CLK_0145 mercuric transport protein periplasmic component K08364 merP; periplasmic mercuric ion binding protein
D CLK_2301 transporter, HlyC/CorC family K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CLK_2317 CBS/transporter-associated domain protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CLK_3392 conserved hypothetical protein K21449 ata; trimeric autotransporter adhesin
D CLK_3512 lrgA family protein K06518 cidA; holin-like protein
D CLK_3428 putative lysine-specific permease K11733 lysP; lysine-specific permease
D CLK_1055 arcD; arginine/ornithine antiporter K03758 arcD; arginine:ornithine antiporter / lysine permease
D CLK_1853 amino acid permease family protein K20265 gadC; glutamate:GABA antiporter
D CLK_3531 amino acid permease family protein K20265 gadC; glutamate:GABA antiporter
D CLK_1430 spore germination protein K06311 yndE; spore germination protein
D CLK_1432 spore germination protein K06311 yndE; spore germination protein
D CLK_3299 spore germination protein K06311 yndE; spore germination protein
D CLK_3316 ZIP transporter family protein K07238 TC.ZIP; zinc transporter, ZIP family
D CLK_0612 zinc transporter, ZIP family K07238 TC.ZIP; zinc transporter, ZIP family
D CLK_0323 drug/metabolite transporter, DMT family K08978 TC.BAT1; bacterial/archaeal transporter family protein
D CLK_0284 putative membrane protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D CLK_2798 putative membrane protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D CLK_3062 putative membrane protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D CLK_0289 putative membrane protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D CLK_1646 gntP; gluconate permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D CLK_0445 lctP; L-lactate permease K03303 lutP; lactate permease
D CLK_0571 choline/carnitine/betaine transporter K05020 opuD; glycine betaine transporter
D CLK_0063 gltS; sodium/glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family
D CLK_1437 transporter, monovalent cation:proton antiporter-2 (CPA2) family K11105 cvrA; potassium/hydrogen antiporter
D CLK_3549 transporter, monovalent cation:proton antiporter-2 (CPA2) family K11105 cvrA; potassium/hydrogen antiporter
D CLK_2246 transporter, monovalent cation:proton antiporter-2 (CPA2) family K26730 napA; Na+:H+ antiporter
D CLK_0760 putative Trk system potassium uptake protein TrkH K03498 trkH; trk/ktr system potassium uptake protein
D CLK_2526 potassium uptake protein, TrkH family K03498 trkH; trk/ktr system potassium uptake protein
D CLK_0759 putative Trk system potassium uptake protein TrkA K03499 trkA; trk/ktr system potassium uptake protein
D CLK_2525 potassium uptake protein, TrkA family K03499 trkA; trk/ktr system potassium uptake protein
D CLK_0959 pyrP; uracil permease K02824 uraA; uracil permease
D CLK_2281 xanthine/uracil permease family protein K24206 uacT; uric acid transporter
D CLK_2295 xanthine/uracil permease family protein K06901 pbuG; adenine/guanine/hypoxanthine permease
D CLK_2603 xanthine/uracil permease family protein K06901 pbuG; adenine/guanine/hypoxanthine permease
D CLK_1125 xanthine/uracil permease family protein K06901 pbuG; adenine/guanine/hypoxanthine permease
D CLK_1460 xanthine/uracil permease family protein K06901 pbuG; adenine/guanine/hypoxanthine permease
D CLK_3743 chromate transporter protein K07240 chrA; chromate transporter
D CLK_3744 chromate transport protein K07240 chrA; chromate transporter
D CLK_2763 sulfate permease, SulP family K03321 TC.SULP; sulfate permease, SulP family
D CLK_2887 Na/Pi-cotransporter family protein/PhoU family protein K03324 yjbB; phosphate:Na+ symporter
D CLK_0915 polysaccharide biosynthesis family protein K06409 spoVB; stage V sporulation protein B
D CLK_3005 putative stage V sporulation protein B K06409 spoVB; stage V sporulation protein B
D CLK_0916 spoVB; stage V sporulation protein B K06409 spoVB; stage V sporulation protein B
D CLK_2489 mviN; integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D CLK_1957 auxin efflux carrier family protein K24180 mleP; malate permease and related proteins
D CLK_3355 riboflavin transporter K23675 fmnP; riboflavin transporter
D CLK_3765 probable proton-coupled thiamine transporter YuaJ K16789 thiT; thiamine transporter
D CLK_2006 putative membrane protein K16788 niaX; niacin transporter
D CLK_0941 cell cycle protein, FtsW/RodA/SpoVE family K03588 ftsW; cell division protein FtsW
D CLK_0733 putative membrane protein K23242 mntP; manganese efflux pump family protein
D CLK_0725 conserved domain protein K15383 K15383; MtN3 and saliva related transmembrane protein
D CLK_0726 conserved domain protein K15383 K15383; MtN3 and saliva related transmembrane protein
D CLK_3444 DsbD family protein K06196 ccdA; cytochrome c-type biogenesis protein
D CLK_1201 putative cytochrome c-type biogenesis protein K06196 ccdA; cytochrome c-type biogenesis protein
D CLK_3683 putative bacteriocin ABC transporter, bacteriocin-binding protein K20345 blpB; membrane fusion protein, peptide pheromone/bacteriocin exporter
D CLK_2074 capsular exopolysaccharide family protein K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D CLK_2076 capsular polysaccharide biosynthsis protein K19420 epsA; protein tyrosine kinase modulator
D CLK_0216 feoA; ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D CLK_0522 feoA; ferrous ion transport protein A K04758 feoA; ferrous iron transport protein A
D CLK_0472 putative ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D CLK_0473 feoA; ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D CLK_0474 feoB; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D CLK_0521 feoB; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D CLK_0218 feoB-1; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D CLK_3267 mgtC family protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
C 02044 Secretion system [BR:cbl02044]
D CLK_0757 type IV leader peptidase family protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D CLK_1297 putative pilin K02650 pilA; type IV pilus assembly protein PilA
D CLK_1310 general secretion pathway protein K02653 pilC; type IV pilus assembly protein PilC
D CLK_1291 hypothetical protein K02663 pilN; type IV pilus assembly protein PilN
D CLK_1922 pilT; twitching motility protein K02669 pilT; twitching motility protein PilT
D CLK_A0311 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D CLK_A0282 hypothetical protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D CLK_A0309 bacterial type II secretion system protein F domain K12510 tadB; tight adherence protein B
D CLK_A0308 bacterial type II secretion system protein F domain K12511 tadC; tight adherence protein C
D CLK_0948 YGGT family protein K02221 yggT; YggT family protein
D CLK_2362 putative comE operon protein 1 K02237 comEA; competence protein ComEA
D CLK_3321 cytidine/deoxycytidylate deaminase family protein K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D CLK_2354 ComEC/Rec2 family protein K02238 comEC; competence protein ComEC
D CLK_3617 metallo-beta-lactamase family protein K02238 comEC; competence protein ComEC
D CLK_3349 comF protein, homolog K02242 comFC; competence protein ComFC
D CLK_2033 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D CLK_3357 conserved hypothetical protein K04061 flhB2; flagellar biosynthesis protein
D CLK_2050 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D CLK_2048 fliH; flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D CLK_2047 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D CLK_2128 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D CLK_2037 fliO; flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D CLK_2036 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D CLK_2035 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D CLK_2034 flagellar biosynthetic protein FliR/FlhB K13820 fliR-flhB; flagellar biosynthesis protein FliR/FlhB
D CLK_A0294 ATPase involved in conjugal plasmid transfer K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D CLK_A0293 possible plasmid transfer factor, TraK K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D CLK_3351 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CLK_2456 secD; protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D CLK_2938 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D CLK_2455 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D CLK_3413 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D CLK_2904 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D CLK_1826 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CLK_1828 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D CLK_2460 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D CLK_3129 putative sporulation protein/membrane protein insertase, OxaA family K03217 yidC; YidC/Oxa1 family membrane protein insertase
C 02042 Bacterial toxins [BR:cbl02042]
D CLK_A0076 botA; bontoxilysin A K06011 boNT; botulinum neurotoxin [EC:3.4.24.69]
D CLK_A0075 ntnH; botulinum neurotoxin type A3, nontoxic-nonhemagglutinin component, NTNH K16623 ntnH; botulinum neurotoxin type non-toxic component
D CLK_1000 C4-dicarboxylate transporter/malic acid transport protein K11041 eta; exfoliative toxin A/B
D CLK_2301 transporter, HlyC/CorC family K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CLK_2317 CBS/transporter-associated domain protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CLK_3697 bacteriocin protoxin, streptolysin S family K11046 sagA; streptolysin S associated protein
D CLK_1056 hemolysin III K11068 hlyIII; hemolysin III
D CLK_0932 hlyIII; hemolysin III K11068 hlyIII; hemolysin III
D CLK_2020 putative phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
D CLK_1084 colG; collagenase K01387 colA; microbial collagenase [EC:3.4.24.3]
D CLK_1375 cloSI; clostripain K08587 cloSI; clostripain [EC:3.4.22.8]
C 02022 Two-component system [BR:cbl02022]
D CLK_1910 sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D CLK_1911 putative phosphate regulon DNA-binding response regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D CLK_3540 DNA-binding response regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D CLK_3490 sensor histidine kinase K07650 cssS; two-component system, OmpR family, sensor histidine kinase CssS [EC:2.7.13.3]
D CLK_3489 DNA-binding response regulator K07770 cssR; two-component system, OmpR family, response regulator CssR
D CLK_0411 DNA-binding response regulator K07668 vicR; two-component system, OmpR family, response regulator VicR
D CLK_0837 sensor histidine kinase K11633 yxdK; two-component system, OmpR family, sensor histidine kinase YxdK [EC:2.7.13.3]
D CLK_3508 sensor histidine kinase K11633 yxdK; two-component system, OmpR family, sensor histidine kinase YxdK [EC:2.7.13.3]
D CLK_0836 DNA-binding response regulator K11634 yxdJ; two-component system, OmpR family, response regulator YxdJ
D CLK_3507 DNA-binding response regulator K11634 yxdJ; two-component system, OmpR family, response regulator YxdJ
D CLK_1422 sensor histidine kinase K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D CLK_1423 DNA-binding response regulator K18344 vanRB; two-component system, OmpR family, response regulator VanR
D CLK_3435 VanS K18350 vanSC; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D CLK_3434 regulatory protein VanR K18349 vanRC; two-component system, OmpR family, response regulator VanR
D CLK_2765 DNA-binding response regulator K18349 vanRC; two-component system, OmpR family, response regulator VanR
D CLK_3451 regulatory protein VanR K18349 vanRC; two-component system, OmpR family, response regulator VanR
D CLK_3553 DNA-binding response regulator K18349 vanRC; two-component system, OmpR family, response regulator VanR
D CLK_2842 sensory transduction histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D CLK_1759 sensor histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D CLK_1760 DNA-binding response regulator K18941 arlR; two-component system, OmpR family, response regulator ArlR
D CLK_2843 alkaline phosphatase synthesis transcriptional regulatory protein PhoP K18941 arlR; two-component system, OmpR family, response regulator ArlR
D CLK_1381 sensor histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D CLK_1053 putative lantibiotic biosynthesis sensor histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D CLK_1052 putative lantibiotic biosynthesis regulatory protein K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D CLK_1382 DNA-binding response regulator K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D CLK_0341 DNA-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator
D CLK_1262 spo0A; sporulation transcription factor Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
D CLK_0626 sensor histidine kinase K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D CLK_0624 DNA-binding response regulator, LytTr family K07707 agrA; two-component system, LytTR family, response regulator AgrA
D CLK_2725 sensor histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D CLK_2724 DNA-binding response regulator, LytTr family K02477 K02477; two-component system, LytTR family, response regulator
D CLK_2133 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D CLK_0443 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CLK_2131 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CLK_2135 cheB; protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D CLK_1159 cheV; chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D CLK_0012 sensor histidine kinase K07717 glnK; two-component system, sensor histidine kinase GlnK [EC:2.7.13.3]
D CLK_0011 response regulator K07719 glnL; two-component system, response regulator GlnL
C 02035 Bacterial motility proteins [BR:cbl02035]
D CLK_2133 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D CLK_2137 cheW; chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D CLK_2130 putative chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D CLK_1168 cheX; chemotaxis protein CheX K03409 cheX; chemotaxis protein CheX
D CLK_2132 cheC; chemotaxis protein CheC K03410 cheC; chemotaxis protein CheC
D CLK_2136 cheD; chemotaxis protein CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D CLK_2134 cheR; chemotaxis protein methyltransferase, CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D CLK_2135 cheB; protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D CLK_0443 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CLK_2131 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CLK_1159 cheV; chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D CLK_2198 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLK_3762 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLK_3589 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLK_3639 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLK_0094 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLK_0133 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLK_1004 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLK_1037 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLK_0798 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLK_2180 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLK_2192 putative methyl-accepting chemotaxis protein TlpC K03406 mcp; methyl-accepting chemotaxis protein
D CLK_1374 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLK_1155 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLK_2217 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLK_2610 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLK_1128 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLK_1454 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLK_2048 fliH; flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D CLK_2047 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D CLK_2046 fliJ; flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ
D CLK_2037 fliO; flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D CLK_2036 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D CLK_2035 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D CLK_2034 flagellar biosynthetic protein FliR/FlhB K13820 fliR-flhB; flagellar biosynthesis protein FliR/FlhB
D CLK_2033 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D CLK_2049 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D CLK_2129 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D CLK_2128 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D CLK_2050 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D CLK_2038 fliL; flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D CLK_2051 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D CLK_2045 fliK; flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK
D CLK_2054 flgB; flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D CLK_2044 flgD; flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D CLK_2026 flagellar basal body rod protein K02391 flgF; flagellar basal-body rod protein FlgF
D CLK_2025 flagellar basal body rod protein K02392 flgG; flagellar basal-body rod protein FlgG
D CLK_2042 flgE; flagellar hook protein flgE K02390 flgE; flagellar hook protein FlgE
D CLK_2125 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D CLK_2124 flgL; flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL
D CLK_2115 flagellin K02406 fliC; flagellin
D CLK_2055 flagellin K02406 fliC; flagellin
D CLK_2082 fliC; flagellin K02406 fliC; flagellin
D CLK_2116 flagellin K02406 fliC; flagellin
D CLK_A0218 flagellin K02406 fliC; flagellin
D CLK_3424 flagellin protein K02406 fliC; flagellin
D CLK_2118 fliD; Flagellar hook-associated protein 2 K02407 fliD; flagellar hook-associated protein 2
D CLK_2119 fliS; flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D CLK_2029 fliA; RNA polymerase sigma factor for flagellar operon FliA K02405 fliA; RNA polymerase sigma factor FliA
D CLK_1667 putative chemotaxis protein MotA K02556 motA; chemotaxis protein MotA
D CLK_2040 motA; chemotaxis protein MotA K02556 motA; chemotaxis protein MotA
D CLK_2039 motB; chemotaxis protein MotB K02557 motB; chemotaxis protein MotB
D CLK_1666 putative chemotaxis MotB protein K02557 motB; chemotaxis protein MotB
D CLK_2123 fliW; flagellar assembly factor FliW K13626 fliW; flagellar assembly factor FliW
D CLK_2127 negative regulator of flagellin synthesis FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D CLK_2121 flaG family protein K06603 flaG; flagellar protein FlaG
D CLK_2041 flagellar protein FlbD K02385 flbD; flagellar protein FlbD
D CLK_2032 flhF; flagellar biosynthesis protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF
D CLK_2031 flhG; flagellar biosynthesis protein FlhG K04562 flhG; flagellar biosynthesis protein FlhG
D CLK_1922 pilT; twitching motility protein K02669 pilT; twitching motility protein PilT
D CLK_1297 putative pilin K02650 pilA; type IV pilus assembly protein PilA
D CLK_1310 general secretion pathway protein K02653 pilC; type IV pilus assembly protein PilC
D CLK_0757 type IV leader peptidase family protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D CLK_1291 hypothetical protein K02663 pilN; type IV pilus assembly protein PilN
D CLK_A0311 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D CLK_A0282 hypothetical protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins [BR:cbl03037]
D CLK_1236 transporter, monovalent cation:proton antiporter-2 (CPA2) family K23994 SLC9B1_2; solute carrier family 9B (sodium/hydrogen exchanger), member 1/2
C 04812 Cytoskeleton proteins [BR:cbl04812]
D CLK_3338 mbl; Mbl protein K03569 mreB; rod shape-determining protein MreB and related proteins
D CLK_2386 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D CLK_A0298 conserved hypothetical protein K18640 parM; plasmid segregation protein ParM
D CLK_A0227 hypothetical protein K18640 parM; plasmid segregation protein ParM
D CLK_1918 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D CLK_1919 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D CLK_2382 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D CLK_2381 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D CLK_2380 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D CLK_3123 soj; sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein
D CLK_3122 stage 0 sporulation protein J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CLK_3124 parB family protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:cbl04147]
D CLK_1438 hsp90; heat shock protein K04079 HSP90A; molecular chaperone HtpG
D CLK_3412 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CLK_3408 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CLK_3409 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D CLK_2804 pykA; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CLK_0664 dipeptidase family protein K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D CLK_2714 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CLK_2344 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CLK_2695 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CLK_2712 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D CLK_2926 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D CLK_2940 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D CLK_2339 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D CLK_0755 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D CLK_0997 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CLK_1969 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CLK_2598 thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CLK_2903 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D CLK_2453 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D CLK_1459 phosphoribosyl transferase domain protein K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D CLK_2057 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CLK_2058 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CLK_2280 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D CLK_2169 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D CLK_3033 putative glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CLK_0360 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D CLK_0567 D-isomer specific 2-hydroxyacid dehydrogenase family protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CLK_2269 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CLK_0101 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CLK_1098 acoL; TPP-dependent acetoin dehydrogenase complex, E3 component, dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CLK_2595 electron transfer flavoprotein, alpha subunit/FixB family protein K03522 fixB; electron transfer flavoprotein alpha subunit
D CLK_3410 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 02048 Prokaryotic defense system [BR:cbl02048]
D CLK_A0142 cas6; CRISPR-associated protein Cas6 K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
D CLK_A0143 hypothetical protein K19114 csh1; CRISPR-associated protein Csh1
D CLK_A0144 conserved hypothetical protein K19115 csh2; CRISPR-associated protein Csh2
D CLK_A0145 cas5h; crispr-associated protein Cas5, hmari subtype K19116 cas5h; CRISPR-associated protein Cas5h
D CLK_1539 putative type I site-specific deoxyribonuclease, HsdR family subfamily K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D CLK_1537 type IC HsdS subunit K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D CLK_1538 hsdM; type I restriction-modification system, M subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D CLK_2484 conserved hypothetical protein K07317 K07317; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D CLK_2849 putative site-specific DNA-methyltransferase restriction-modification protein K07317 K07317; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D CLK_A0203 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D CLK_2828 PemK family protein K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D CLK_3745 PemK family protein K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D CLK_2829 conserved hypothetical protein K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI
D CLK_A0043 death-on-curing family protein K07341 doc; death on curing protein
D CLK_1918 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D CLK_3338 mbl; Mbl protein K03569 mreB; rod shape-determining protein MreB and related proteins
D CLK_2386 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D CLK_2156 DNA topoisomerase, GyrA/ParC subunit family K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D CLK_2157 DNA topoisomerase, GyrB/ParE subunit family K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D CLK_0617 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CLK_1953 nifS; cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels [BR:cbl04040]
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:cbl04090]
C 01504 Antimicrobial resistance genes [BR:cbl01504]
D CLK_2787 acetyltransferase K18815 aac6-I; aminoglycoside 6'-N-acetyltransferase I [EC:2.3.1.82]
D CLK_1551 GTP-binding elongation factor, TetM/TetO family K18220 tetM; ribosomal protection tetracycline resistance protein
D CLK_2251 florfenicol/chloramphenicol resistance protein K15632 cfr; 23S rRNA (adenine-C8)-methyltransferase [EC:2.1.1.224]
D CLK_3763 ABC transporter, ATP-binding protein K18231 msr; macrolide transport system ATP-binding/permease protein
D CLK_2252 drug resistance ABC transporter, RA2 family, ATP-binding protein K19350 lsa; lincosamide and streptogramin A transport system ATP-binding/permease protein
D CLK_3430 streptogramin A acetyltransferase K18234 vat; virginiamycin A acetyltransferase [EC:2.3.1.-]
D CLK_0019 cat; chloramphenicol acetyltransferase K19271 catA; chloramphenicol O-acetyltransferase type A [EC:2.3.1.28]
D CLK_1474 chloramphenicol O-acetyltransferase K19271 catA; chloramphenicol O-acetyltransferase type A [EC:2.3.1.28]
D CLK_1027 cat; chloramphenicol acetyltransferase K19271 catA; chloramphenicol O-acetyltransferase type A [EC:2.3.1.28]
D CLK_1645 fosfomycin resistance protein FosX K21252 fosX; fosfomycin resistance protein FosX
D CLK_0078 peptidase, M56 family protein K02172 blaR1; bla regulator protein blaR1
D CLK_0077 blaI; penicillinase repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D CLK_1422 sensor histidine kinase K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D CLK_1423 DNA-binding response regulator K18344 vanRB; two-component system, OmpR family, response regulator VanR
D CLK_0478 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D CLK_0007 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D CLK_3435 VanS K18350 vanSC; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D CLK_3434 regulatory protein VanR K18349 vanRC; two-component system, OmpR family, response regulator VanR
D CLK_2765 DNA-binding response regulator K18349 vanRC; two-component system, OmpR family, response regulator VanR
D CLK_3451 regulatory protein VanR K18349 vanRC; two-component system, OmpR family, response regulator VanR
D CLK_3553 DNA-binding response regulator K18349 vanRC; two-component system, OmpR family, response regulator VanR
D CLK_0162 multidrug resistance ABC transporter ATP-binding and permease protein K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2]
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:cbl00537]
D CLK_0664 dipeptidase family protein K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:cbl03100]
D CLK_3820 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CLK_3868 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CLK_3950 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CLK_3826 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CLK_3916 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CLK_3924 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CLK_3931 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CLK_3827 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CLK_3912 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CLK_3945 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D CLK_3872 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D CLK_3944 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D CLK_3909 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CLK_3968 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CLK_3972 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CLK_3965 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CLK_3906 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D CLK_3849 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D CLK_3860 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D CLK_3921 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D CLK_3929 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D CLK_3967 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CLK_3970 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CLK_3974 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CLK_3875 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CLK_3907 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CLK_3926 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CLK_3918 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CLK_3913 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CLK_3917 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CLK_3932 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CLK_3925 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CLK_3943 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CLK_3922 tRNA-His K14226 tRNA-His; tRNA His
D CLK_3930 tRNA-His K14226 tRNA-His; tRNA His
D CLK_3869 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CLK_3948 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CLK_3959 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CLK_3962 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CLK_3919 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CLK_3927 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CLK_3903 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CLK_3902 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CLK_3923 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CLK_3915 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CLK_3833 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CLK_3928 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CLK_3837 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CLK_3920 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CLK_3819 tRNA-Met K14230 tRNA-Met; tRNA Met
D CLK_3951 tRNA-Met K14230 tRNA-Met; tRNA Met
D CLK_3956 tRNA-Met K14230 tRNA-Met; tRNA Met
D CLK_3960 tRNA-Met K14230 tRNA-Met; tRNA Met
D CLK_3957 tRNA-Met K14230 tRNA-Met; tRNA Met
D CLK_3958 tRNA-Met K14230 tRNA-Met; tRNA Met
D CLK_3961 tRNA-Met K14230 tRNA-Met; tRNA Met
D CLK_3841 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D CLK_3908 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D CLK_3845 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D CLK_3914 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CLK_3933 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CLK_3963 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CLK_3823 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CLK_3825 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CLK_3822 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CLK_3824 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CLK_3828 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CLK_3942 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CLK_3852 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CLK_3971 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CLK_3855 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CLK_3964 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CLK_3935 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D CLK_3853 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D CLK_3856 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D CLK_3854 tRNA-Val K14237 tRNA-Val; tRNA Val
D CLK_3969 tRNA-Val K14237 tRNA-Val; tRNA Val
D CLK_3966 tRNA-Val K14237 tRNA-Val; tRNA Val
D CLK_3973 tRNA-Val K14237 tRNA-Val; tRNA Val
D CLK_3910 tRNA-Val K14237 tRNA-Val; tRNA Val
D CLK_3901 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D CLK_3867 rrs; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLK_3846 rrs; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLK_3949 rrs; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLK_3830 rrs; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLK_3834 rrs; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLK_3838 rrs; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLK_3842 rrs; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLK_3816 rrs; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLK_3954 rrs; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLK_3847 rrl; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLK_3817 rrl; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLK_3843 rrl; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLK_3839 rrl; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLK_3870 rrl; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLK_3953 rrl; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLK_3947 rrl; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLK_3835 rrl; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLK_3831 rrl; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLK_3832 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLK_3848 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLK_3844 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLK_3836 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLK_3840 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLK_3946 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLK_3818 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLK_3871 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLK_3952 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLK_3975 srpB; bacterial signal recognition particle RNA K01983 ffs; SRP RNA
D CLK_4008 Bacterial RNase P class A K01978 rnpB; M1 RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D CLK_1647 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase K22024 pdxA2; 4-phospho-D-threonate 3-dehydrogenase / 4-phospho-D-erythronate 3-dehydrogenase [EC:1.1.1.408 1.1.1.409]
D CLK_1094 acoA; TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit K21416 acoA; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [EC:1.1.1.-]
D CLK_1095 acoB; TPP-dependent acetoin dehydrogenase complex, E1 component, beta subunit K21417 acoB; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta [EC:1.1.1.-]
D CLK_3442 xanthine dehydrogenase family protein, iron-sulfur binding subunit K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3]
D CLK_2704 acyl-CoA dehydrogenase family protein K24016 acdA; 3-(aryl)acrylate reductase [EC:1.3.8.15]
D CLK_3726 ceo; N(5)-(carboxyethyl)ornithine synthase K00298 ceo; N5-(carboxyethyl)ornithine synthase [EC:1.5.1.24]
D CLK_2005 metallo-beta-lactamase family protein/flavodoxin K22405 fprA1_2; NADH oxidase (H2O-forming) [EC:1.6.3.4]
D CLK_0832 putative methionine-S-sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D CLK_1379 msrA; peptide-methionine (S)-S-oxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D CLK_1726 msrB; methionine-R-sulfoxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D CLK_3712 putative thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D CLK_0277 conserved hypothetical protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D CLK_2750 superoxide reductase K05919 dfx; superoxide reductase [EC:1.15.1.2]
D CLK_1166 ferritin family protein K02217 ftnA; ferritin [EC:1.16.3.2]
D CLK_1108 oxidoreductase, NAD/FAD-binding K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D CLK_2721 oxidoreductase, NAD-binding K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D CLK_0165 arsenate reductase family protein K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D CLK_0702 glycine/sarcosine/betaine reductase complex component A1 (Selenoprotein PA 1) (Thioredoxinreductase complex A 1) K10670 grdA; glycine/sarcosine/betaine reductase complex component A [EC:1.21.4.2 1.21.4.3 1.21.4.4]
D CLK_0701 grdA; glycine reductase complex component A, selenocysteine-containing K10670 grdA; glycine/sarcosine/betaine reductase complex component A [EC:1.21.4.2 1.21.4.3 1.21.4.4]
D CLK_0696 grdE; glycine reductase, subunits ABC K10671 grdE; glycine reductase complex component B subunit alpha and beta [EC:1.21.4.2]
D CLK_0697 grdB; glycine reductase complex component B, gamma subunit, selenocysteine-containing K10672 grdB; glycine reductase complex component B subunit gamma [EC:1.21.4.2]
D CLK_0704 grdD; glycine reductase complex component C, alpha subunit K21576 grdD; glycine/sarcosine/betaine reductase complex component C subunit alpha [EC:1.21.4.2 1.21.4.3 1.21.4.4]
D CLK_0703 grdC; glycine reductase complex component C, beta subunit K21577 grdC; glycine/sarcosine/betaine reductase complex component C subunit beta [EC:1.21.4.2 1.21.4.3 1.21.4.4]
D CLK_3269 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D CLK_2612 pflA; pyruvate formate-lyase activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D CLK_0643 pyruvate formate-lyase-activating enzyme (PFL-activatingenzyme) (Formate-C-acetyltransferase-activating enzyme) K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D CLK_2582 glycyl-radical enzyme activating family protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D CLK_3053 radical SAM domain protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D CLK_3027 radical SAM domain protein K04070 pflX; putative pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D CLK_1570 glycyl-radical enzyme activating family protein K20037 cutD; choline trimethylamine-lyase activating enzyme [EC:1.97.1.-]
D CLK_0279 nitroreductase family protein K15976 K15976; putative NAD(P)H nitroreductase [EC:1.-.-.-]
D CLK_0015 cfa; cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D CLK_0962 putative methyltransferase K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-]
D CLK_0558 maa; maltose O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D CLK_1697 acetyltransferase, GNAT family K03826 yiaC; putative acetyltransferase [EC:2.3.1.-]
D CLK_0286 acetyltransferase, GNAT family K03827 yjaB; putative acetyltransferase [EC:2.3.1.-]
D CLK_0427 acetyltransferase, GNAT family K03830 yafP; putative acetyltransferase [EC:2.3.1.-]
D CLK_1739 tgl; protein-glutamine gamma-glutamyltransferase K00686 tgl; protein-glutamine gamma-glutamyltransferase [EC:2.3.2.13]
D CLK_2495 glycosyl transferase, group 1 family K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-]
D CLK_3280 conserved hypothetical protein K06898 larB; pyridinium-3,5-biscarboxylic acid mononucleotide synthase [EC:2.5.1.143]
D CLK_2606 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D CLK_3565 apbE family protein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D CLK_1648 conserved hypothetical protein K22129 dtnK; D-threonate/D-erythronate kinase [EC:2.7.1.219 2.7.1.220]
D CLK_1445 pfkB; 1-phosphofructokinase K25602 tagK; D-tagatose-1-phosphate kinase [EC:2.7.1.234]
D CLK_1878 DAK2 domain protein K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D CLK_3095 conserved hypothetical protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D CLK_A0098 reverse transcriptase/endonuclease protein K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D CLK_2954 putative DNA-binding protein K07067 disA; diadenylate cyclase [EC:2.7.7.85]
D CLK_2874 conserved hypothetical protein TIGR00159 K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D CLK_0634 conserved hypothetical protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D CLK_1967 putative phosphoenolpyruvate synthase K22579 rph; rifampicin phosphotransferase [EC:2.7.9.6]
D CLK_2481 spoIIAB; anti-sigma F factor K06379 spoIIAB; stage II sporulation protein AB (anti-sigma F factor) [EC:2.7.11.1]
D CLK_1993 hprK; HPr(Ser) kinase/phosphatase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D CLK_2957 ATP:guanido phosphotransferase domain protein K19405 mcsB; protein arginine kinase [EC:2.7.14.1]
D CLK_1638 CoA-transferase, family III K20882 hadA; (R)-2-hydroxy-4-methylpentanoate CoA-transferase [EC:2.8.3.24]
D CLK_1688 putative RNAase regulator K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D CLK_0595 thioesterase family protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D CLK_2992 spoIIE; stage II sporulation protein E K06382 spoIIE; stage II sporulation protein E [EC:3.1.3.16]
D CLK_2075 exopolysaccharide biosynthesis protein K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D CLK_1989 PHP domain protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D CLK_3107 DHH family protein K22927 gdpP; cyclic-di-AMP phosphodiesterase [EC:3.1.4.59]
D CLK_2334 putative hydrolase K07037 pgpH; cyclic-di-AMP phosphodiesterase PgpH [EC:3.1.4.-]
D CLK_3253 hydrolase, TatD family K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D CLK_3255 primase homolog K05985 rnmV; ribonuclease M5 [EC:3.1.26.8]
D CLK_A0066 thermonuclease (TNase) (Micrococcal nuclease)(Staphylococcal nuclease) K01174 nuc; micrococcal nuclease [EC:3.1.31.1]
D CLK_2008 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D CLK_1892 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D CLK_0299 putative peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D CLK_2188 polysaccharide deacetylase family protein K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D CLK_3405 polysaccharide deacetylase family protein K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D CLK_2485 polysaccharide deacetylase family protein K01567 pdaA; peptidoglycan-N-acetylmuramic acid deacetylase [EC:3.5.1.-]
D CLK_2365 endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D CLK_2587 ATPase, AAA family K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D CLK_3318 low molecular weight protein tyrosine phosphatase K20201 ywlE; protein arginine phosphatase [EC:3.9.1.2]
D CLK_3398 splB; spore photoproduct lyase K03716 splB; spore photoproduct lyase [EC:4.1.99.14]
D CLK_1499 myosin-cross-reactive antigen family protein K10254 ohyA; oleate hydratase [EC:4.2.1.53]
D CLK_2832 carbohydrate kinase family protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D CLK_1637 putative (R)-2-hydroxyglutaryl-CoA dehydratase, alpha subunit K20025 hadB; (R)-2-hydroxyisocaproyl-CoA dehydratase alpha subunit [EC:4.2.1.157]
D CLK_1636 putative (R)-2-hydroxyglutaryl-CoA dehydratase, beta subunit K20026 hadC; (R)-2-hydroxyisocaproyl-CoA dehydratase beta subunit [EC:4.2.1.157]
D CLK_2706 fldB; R-phenyllactate dehydratase, medium subunit K23110 fldB; (R)-3-(aryl)lactoyl-CoA dehydratase alpha subunit [EC:4.2.1.175]
D CLK_2705 fldC; R-phenyllactate dehydratase, small subunit K23111 fldC; (R)-3-(aryl)lactoyl-CoA dehydratase beta subunit [EC:4.2.1.175]
D CLK_2282 dpaL; diaminopropionate ammonia-lyase K01751 E4.3.1.15; diaminopropionate ammonia-lyase [EC:4.3.1.15]
D CLK_1571 formate acetyltransferase K20038 cutC; choline trimethylamine-lyase [EC:4.3.99.4]
D CLK_0618 conserved hypothetical protein TIGR00268 K06864 larE; pyridinium-3,5-biscarboxylic acid mononucleotide sulfurtransferase [EC:4.4.1.37]
D CLK_3279 conserved hypothetical protein TIGR00268 K06864 larE; pyridinium-3,5-biscarboxylic acid mononucleotide sulfurtransferase [EC:4.4.1.37]
D CLK_3278 conserved hypothetical protein K09121 larC; pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel chelatase [EC:4.99.1.12]
D CLK_1630 putative CoA-substrate-specific enzyme activase K23876 hgdC; (R)-2-hydroxyacyl-CoA dehydratese activating ATPase [EC:5.6.1.9]
D CLK_2707 fldI; R-phenyllactate dehydratase activator K23876 hgdC; (R)-2-hydroxyacyl-CoA dehydratese activating ATPase [EC:5.6.1.9]
D CLK_2640 hgdC; (R)-hydroxyglutaryl-CoA dehydratase activator K23876 hgdC; (R)-2-hydroxyacyl-CoA dehydratese activating ATPase [EC:5.6.1.9]
D CLK_1032 putative CoA-substrate-specific enzyme activase K23876 hgdC; (R)-2-hydroxyacyl-CoA dehydratese activating ATPase [EC:5.6.1.9]
D CLK_3295 cphA; cyanophycin synthase (L-aspartate-adding) K03802 cphA; cyanophycin synthetase [EC:6.3.2.29 6.3.2.30]
D CLK_3557 electron transport complex, RnfABCDGE type, D subunit K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D CLK_3556 electron transport complex, RnfABCDGE type, C subunit K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D CLK_3561 electron transport complex, RnfABCDGE type, B subunit K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D CLK_3742 calcium-translocating P-type ATPase, PMCA-type K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D CLK_1018 putative membrane protein K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D CLK_2022 calcium-translocating P-type ATPase, PMCA-type K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D CLK_1417 cation-transporting ATPase PacL K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D CLK_1025 cation-transporting ATPase, P-type K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D CLK_3686 cadA; cadmium-exporting ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
D CLK_2266 mgtA; magnesium-importing ATPase K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14]
D CLK_1480 magnesium transport P-type atpase K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14]
D CLK_0748 cation-transporting ATPase, P-type K12952 ctpE; cation-transporting P-type ATPase E [EC:7.2.2.-]
C 99981 Carbohydrate metabolism
D CLK_3170 sfsA; sugar fermentation stimulation protein K06206 sfsA; sugar fermentation stimulation protein A
C 99982 Energy metabolism
D CLK_0441 rubrerythrin family protein K19824 fprB; rubrerythrin
D CLK_2590 iron-sulfur cluster-binding protein K05337 fer; ferredoxin
D CLK_3264 iron-sulfur cluster-binding protein K05337 fer; ferredoxin
D CLK_3558 electron transport complex, RnfABCDGE type, G subunit K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D CLK_3559 electron transport complex, RnfABCDGE type, E subunit K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D CLK_3560 electron transport complex, RnfABCDGE type, A subunit K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D CLK_1952 nifU; FeS cluster assembly scaffold protein NifU K04488 iscU; nitrogen fixation protein NifU and related proteins
D CLK_0569 metallo-beta-lactamase family protein/flavodoxin K12264 norV; anaerobic nitric oxide reductase flavorubredoxin
D CLK_0093 hypothetical protein K02587 nifE; nitrogenase molybdenum-cofactor synthesis protein NifE
D CLK_2194 iron-sulfur cluster-binding protein K02574 napH; ferredoxin-type protein NapH
D CLK_2596 electron transfer flavoprotein, beta subunit/FixA family protein K03521 fixA; electron transfer flavoprotein beta subunit
C 99983 Lipid metabolism
D CLK_3400 DegV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit
D CLK_3797 degV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit
D CLK_0752 DegV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D CLK_1857 prdD; PrdD protein K10795 prdD; D-proline reductase (dithiol)-stabilizing protein PrdD
D CLK_3046 putative D-proline reductase proprotein PrdA K10795 prdD; D-proline reductase (dithiol)-stabilizing protein PrdD
D CLK_1856 prdE; PrdE protein K10796 prdE; D-proline reductase (dithiol)-stabilizing protein PrdE
D CLK_3047 D-proline reductase proprotein PrdA K10796 prdE; D-proline reductase (dithiol)-stabilizing protein PrdE
D CLK_1566 ethanolamine utilization protein EutJ family protein K04024 eutJ; ethanolamine utilization protein EutJ
D CLK_1568 GTP-binding protein K04029 eutP; ethanolamine utilization protein EutP
D CLK_1563 ethanolamine utilization protein EutQ homolog K04030 eutQ; ethanolamine utilization protein EutQ
D CLK_1569 ethanolamine utilization protein EutS homolog K04031 eutS; ethanolamine utilization protein EutS
D CLK_0946 conserved hypothetical protein TIGR00044 K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D CLK_2310 putative cell wall hydrolase CwlJ K01449 cwlJ; cell wall hydrolase
D CLK_2875 cell wall hydrolase family protein K01449 cwlJ; cell wall hydrolase
C 99987 Cofactor metabolism
D CLK_3159 conserved hypothetical protein K03688 ubiB; ubiquinone biosynthesis protein
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D CLK_2860 gutM; glucitol operon activator protein K02466 gutM; glucitol operon activator protein
D CLK_3469 cold shock protein K03704 cspA; cold shock protein
D CLK_0828 cspA; major cold shock protein CspA K03704 cspA; cold shock protein
D CLK_1154 cold shock protein K03704 cspA; cold shock protein
D CLK_3354 RNA-binding protein K06959 tex; protein Tex
D CLK_1897 conserved hypothetical protein K09777 remA; extracellular matrix regulatory protein A
D CLK_3137 conserved hypothetical protein K24648 remB; extracellular matrix regulatory protein B
C 99974 Translation
D CLK_2998 putative RNA-binding protein K07571 K07571; S1 RNA binding domain protein
D CLK_0539 metallo-beta-lactamase family protein K07576 K07576; metallo-beta-lactamase family protein
C 99975 Protein processing
D CLK_2958 UVR domain protein K19411 mcsA; protein arginine kinase activator
D CLK_2630 tig; trigger factor K03545 tig; trigger factor
D CLK_3416 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein
D CLK_1217 hypC; hydrogenase assembly chaperone HypC/HupF K04653 hypC; hydrogenase expression/formation protein HypC
D CLK_1216 hypD; hydrogenase expression/formation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD
D CLK_1215 hypE; hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE
D CLK_1218 hypF; [NiFe] hydrogenase maturation protein HypF K04656 hypF; hydrogenase maturation protein HypF
D CLK_1816 Mg chelatase family protein K07391 comM; magnesium chelatase family protein
D CLK_2286 selenium-dependent molybdenum hydroxylase system protein, YqeB family K07402 xdhC; xanthine dehydrogenase accessory factor
D CLK_2287 putative xanthine dehydrogenase accessory factor K07402 xdhC; xanthine dehydrogenase accessory factor
C 99976 Replication and repair
D CLK_1535 Hnh endonuclease K07453 K07453; putative restriction endonuclease
D CLK_2387 DNA repair protein, RadC family K03630 radC; DNA repair protein RadC
D CLK_0121 conserved hypothetical protein K07459 ybjD; putative ATP-dependent endonuclease of the OLD family
D CLK_1817 conserved hypothetical protein TIGR00252 K07460 yraN; putative endonuclease
D CLK_2762 GIY-YIG domain protein K07461 K07461; putative endonuclease
D CLK_1815 dprA; DNA protecting protein DprA K04096 smf; DNA processing protein
D CLK_1955 ATPase, AAA family K07478 ycaJ; putative ATPase
D CLK_2236 transposase ISLasa7, IS3 family K07483 K07483; transposase
D CLK_A0132 transposase K07491 rayT; REP-associated tyrosine transposase
D CLK_0105 putative transposase K07493 K07493; putative transposase
D CLK_1522 transposase K07496 K07496; putative transposase
D CLK_A0269 putative IS transposase K07496 K07496; putative transposase
D CLK_2235 integrase core domain protein K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D CLK_A0231 phage shock protein A K03969 pspA; phage shock protein A
D CLK_0575 rhodanese domain protein K03972 pspE; phage shock protein E
D CLK_3166 conserved hypothetical protein TIGR00103 K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D CLK_0637 sugar transporter, GPH family K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D CLK_1629 amino acid permease family protein K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D CLK_0818 amino acid permease family protein K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D CLK_3738 amino acid permease family protein K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D CLK_1020 amino acid/peptide transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D CLK_1614 amino acid/peptide transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D CLK_1708 amino acid/peptide transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D CLK_3555 sodium:solute symporter family protein K03307 TC.SSS; solute:Na+ symporter, SSS family
D CLK_3058 sodium:solute symporter family protein K03307 TC.SSS; solute:Na+ symporter, SSS family
D CLK_1487 sodium:neurotransmitter symporter family protein K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D CLK_2296 sodium:alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D CLK_0543 sodium:alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D CLK_0544 sodium:alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D CLK_1961 sodium:alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D CLK_1962 sodium:alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D CLK_0737 sodium:alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D CLK_0684 sodium:alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D CLK_0214 brnQ; branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D CLK_2710 brnQ; branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D CLK_3802 nucleoside transporter, NupC family K03317 TC.CNT; concentrative nucleoside transporter, CNT family
C 99978 Cell growth
D CLK_0060 ric; iron-sulfur cluster repair di-iron protein K07322 ytfE; regulator of cell morphogenesis and NO signaling
D CLK_3169 bofA; sigma-K factor processing regulatory protein BofA K06317 bofA; inhibitor of the pro-sigma K processing machinery
D CLK_0670 cotJB; CotJB protein K06333 cotJB; spore coat protein JB
D CLK_0671 cotJC; CotJC protein K06334 cotJC; spore coat protein JC
D CLK_3128 jag; jag protein K06346 jag; spoIIIJ-associated protein
D CLK_3246 spmA; spore maturation protein A K06373 spmA; spore maturation protein A
D CLK_3247 spmB; spore maturation protein B K06374 spmB; spore maturation protein B
D CLK_1723 conserved hypothetical protein K06376 spo0E; stage 0 sporulation regulatory protein
D CLK_2482 spoIIAA; anti-sigma F factor antagonist K06378 spoIIAA; stage II sporulation protein AA (anti-sigma F factor antagonist)
D CLK_1253 putative sporulation protein K06384 spoIIM; stage II sporulation protein M
D CLK_2350 stage II sporulation protein K06385 spoIIP; stage II sporulation protein P
D CLK_3301 spoIIR; stage II sporulation protein R K06387 spoIIR; stage II sporulation protein R
D CLK_1285 spoIIIAA; stage III sporulation protein AA K06390 spoIIIAA; stage III sporulation protein AA
D CLK_1284 spoIIIAB; stage III sporulation protein AB K06391 spoIIIAB; stage III sporulation protein AB
D CLK_1283 stage III sporulation protein AC K06392 spoIIIAC; stage III sporulation protein AC
D CLK_1282 spoIIIAD; stage III sporulation protein AD K06393 spoIIIAD; stage III sporulation protein AD
D CLK_1281 spoIIIAE; stage III sporulation protein AE K06394 spoIIIAE; stage III sporulation protein AE
D CLK_1280 spoIIIAF; stage III sporulation protein AF K06395 spoIIIAF; stage III sporulation protein AF
D CLK_1279 spoIIIAG; stage III sporulation protein AG K06396 spoIIIAG; stage III sporulation protein AG
D CLK_1278 putative stage III sporulation protein AH K06397 spoIIIAH; stage III sporulation protein AH
D CLK_1900 spoIVA; stage IV sporulation protein A K06398 spoIVA; stage IV sporulation protein A
D CLK_2479 spoVAC; stage V sporulation protein AC K06405 spoVAC; stage V sporulation protein AC
D CLK_2478 stage V sporulation protein AD family protein K06406 spoVAD; stage V sporulation protein AD
D CLK_2477 spoVAE; stage V sporulation protein AE K06407 spoVAE; stage V sporulation protein AE
D CLK_3015 spoVG; stage V sporulation protein G K06412 spoVG; stage V sporulation protein G
D CLK_1778 spoVS; stage V sporulation protein S K06416 spoVS; stage V sporulation protein S
D CLK_2106 cytidylyltransferase K07257 spsF; spore coat polysaccharide biosynthesis protein SpsF
D CLK_2441 small, acid-soluble spore protein beta K06419 SASP-B; small acid-soluble spore protein B (major beta-type SASP)
D CLK_0193 small acid-soluble spore protein, H-type K06425 sspH; small acid-soluble spore protein H (minor)
D CLK_0677 small acid-soluble spore protein, H-type K06425 sspH; small acid-soluble spore protein H (minor)
D CLK_0479 tlp; small, acid-soluble spore protein tlp K06434 tlp; small acid-soluble spore protein (thioredoxin-like protein)
D CLK_3290 sporulation peptidase YabG K06436 yabG; spore coat assemly protein
D CLK_2335 putative stage IV sporulation protein K06438 yqfD; similar to stage IV sporulation protein
D CLK_1429 spore germination protein GerA K06295 gerKA; spore germination protein KA
D CLK_2184 gerAA; spore germination protein, GerAA K06295 gerKA; spore germination protein KA
D CLK_1431 germination protein, Ger(x)C family K06308 yfkR; spore germination protein
D CLK_3298 spore germination protein K06310 yndD; spore germination protein
D CLK_3303 ypeB; germination protein YpeB K06313 ypeB; spore germination protein
C 99993 Cell motility
D CLK_2248 tfoX domain protein K07343 tfoX; DNA transformation protein and related proteins
C 99995 Signaling proteins
D CLK_3760 carbon starvation protein CstA K06200 cstA; carbon starvation protein
D CLK_1943 typA; GTP-binding protein TypA K06207 typA; GTP-binding protein
D CLK_3694 PhoH family protein K07175 phoH2; PhoH-like ATPase
C 99992 Structural proteins
D CLK_1314 glycosyl hydrolase, family 25 K07273 acm; lysozyme
D CLK_A0069 LycA K07273 acm; lysozyme
D CLK_3260 efflux transporter, RND family, MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein
D CLK_0592 conserved hypothetical protein K21463 tcaA; membrane-associated protein TcaA
D CLK_0313 putative propanediol utilization protein PduB K27263 pduB; bacterial microcompartment shell protein
C 99994 Others
D CLK_1905 phoU; phosphate transport system regulatory protein PhoU K02039 phoU; phosphate transport system protein
D CLK_3729 hemerythrin-like metal-binding domain protein K07216 hr; hemerythrin
D CLK_1558 iron-binding protein, hemerythrin K07216 hr; hemerythrin
D CLK_1398 putative molybdopterin biosynthesis enzyme MoeA / molybdate binding domain K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D CLK_0244 conserved hypothetical protein K26996 sdpI; immunity protein, SdpI family
D CLK_0254 conserved hypothetical protein K26996 sdpI; immunity protein, SdpI family
B
B 09194 Poorly characterized
C 99996 General function prediction only
D CLK_1680 acetyltransferase, GNAT family K02348 elaA; ElaA protein
D CLK_2811 PHP domain protein K04477 ycdX; putative hydrolase
D CLK_0022 csaA; CsaA protein K06878 K06878; tRNA-binding protein
D CLK_0968 patatin-like phospholipase family protein K07001 K07001; NTE family protein
D CLK_3641 phospholipase family protein K07001 K07001; NTE family protein
D CLK_2107 HAD-superfamily hydrolase, subfamily IA, variant 1 K07025 K07025; putative hydrolase of the HAD superfamily
D CLK_2813 putative metal-dependent hydrolase, membrane-bound K07038 K07038; inner membrane protein
D CLK_2836 YihY family protein K07058 K07058; membrane protein
D CLK_3666 lemA family protein K03744 lemA; LemA protein
D CLK_0052 putative SanA protein K03748 sanA; SanA protein
D CLK_2841 membrane protein, DedA family K03975 dedA; membrane-associated protein
D CLK_0437 putative phage infection protein K01421 yhgE; putative membrane protein
D CLK_0438 putative phage infection protein K01421 yhgE; putative membrane protein
D CLK_2313 putative phage infection protein K01421 yhgE; putative membrane protein
D CLK_0487 conserved hypothetical protein K08982 K08982; putative membrane protein
C 99997 Function unknown
D CLK_2457 radical SAM domain protein K06871 K06871; uncharacterized protein
D CLK_3788 radical SAM domain protein K06871 K06871; uncharacterized protein
D CLK_3667 putative lipoprotein K06872 K06872; uncharacterized protein
D CLK_3668 conserved hypothetical protein K06872 K06872; uncharacterized protein
D CLK_0504 thymidylate kinase K06888 K06888; uncharacterized protein
D CLK_3758 conserved hypothetical protein K06889 K06889; uncharacterized protein
D CLK_3394 conserved hypothetical protein K06889 K06889; uncharacterized protein
D CLK_3096 CoA-binding protein K06929 K06929; uncharacterized protein
D CLK_0815 conserved hypothetical protein K06933 K06933; uncharacterized protein
D CLK_1824 conserved hypothetical protein K06960 K06960; uncharacterized protein
D CLK_2944 conserved hypothetical protein K06962 K06962; uncharacterized protein
D CLK_1890 putative neutral zinc metallopeptidase K06973 K06973; uncharacterized protein
D CLK_0033 pyridoxamine 5'-phosphate oxidase family protein K07005 K07005; uncharacterized protein
D CLK_0422 putative nitroimidazole resistance protein K07005 K07005; uncharacterized protein
D CLK_0252 nimA; 5-nitroimidazole antibiotic resistance protein NimA K07005 K07005; uncharacterized protein
D CLK_0031 putative 5-nitroimidazole antibiotic resistance protein K07005 K07005; uncharacterized protein
D CLK_0753 nimB; 5-nitroimidazole antibiotic resistance protein NimB K07005 K07005; uncharacterized protein
D CLK_1476 conserved hypothetical protein K07069 K07069; uncharacterized protein
D CLK_1754 conserved hypothetical protein K07074 K07074; uncharacterized protein
D CLK_1643 conserved hypothetical protein K07078 K07078; uncharacterized protein
D CLK_0987 oxidoreductase, aldo/keto reductase family K07079 K07079; uncharacterized protein
D CLK_2803 oxidoreductase, aldo/keto reductase family K07079 K07079; uncharacterized protein
D CLK_2652 putative permease K07089 K07089; uncharacterized protein
D CLK_2259 putative membrane protein K07090 K07090; uncharacterized protein
D CLK_2677 phosphodiesterase, MJ0936 family K07095 K07095; uncharacterized protein
D CLK_0442 phosphodiesterase, MJ0936 family K07095 K07095; uncharacterized protein
D CLK_2607 phosphodiesterase, MJ0936 family K07095 K07095; uncharacterized protein
D CLK_3358 Ser/Thr protein phosphatase family protein K07099 K07099; uncharacterized protein
D CLK_3150 transcriptional regulator, biotin repressor family K07105 K07105; uncharacterized protein
D CLK_1044 putative membrane protein K07112 K07112; uncharacterized protein
D CLK_1048 putative membrane protein K07112 K07112; uncharacterized protein
D CLK_1042 putative membrane protein K07112 K07112; uncharacterized protein
D CLK_3474 conserved hypothetical protein K07118 K07118; uncharacterized protein
D CLK_1524 radical SAM domain protein K07129 K07129; uncharacterized protein
D CLK_2872 oxidoreductase, FAD-binding K07137 K07137; uncharacterized protein
D CLK_3101 pyridine nucleotide-disulphide oxidoreductase family protein K07137 K07137; uncharacterized protein
D CLK_3024 radical SAM protein, TIGR01212 family K07139 K07139; uncharacterized protein
D CLK_2318 conserved hypothetical protein K07164 K07164; uncharacterized protein
D CLK_3130 conserved hypothetical protein TIGR00278 K08998 K08998; uncharacterized protein
D CLK_2337 GatB/Yqey domain protein K09117 K09117; uncharacterized protein
D CLK_3152 putative membrane protein K09118 K09118; uncharacterized protein
D CLK_0061 conserved hypothetical protein K09155 K09155; uncharacterized protein
D CLK_0429 conserved hypothetical protein K09702 K09702; uncharacterized protein
D CLK_0147 conserved hypothetical protein K09705 K09705; uncharacterized protein
D CLK_0764 hypothetical membrane-spanning protein K09729 K09729; uncharacterized protein
D CLK_2138 conserved hypothetical protein K09749 K09749; uncharacterized protein
D CLK_2305 conserved hypothetical protein K09764 K09764; uncharacterized protein
D CLK_3361 conserved hypothetical protein K09766 K09766; uncharacterized protein
D CLK_2694 YaiI/YqxD family protein K09768 K09768; uncharacterized protein
D CLK_3746 conserved hypothetical protein K09770 K09770; uncharacterized protein
D CLK_3624 conserved hypothetical protein K09779 K09779; uncharacterized protein
D CLK_1772 conserved hypothetical protein K09779 K09779; uncharacterized protein
D CLK_1827 helix-turn-helix protein, YlxM/p13 family K09787 K09787; uncharacterized protein
D CLK_0032 conserved hypothetical protein K09790 K09790; uncharacterized protein
D CLK_1161 RNA-binding protein K00243 K00243; uncharacterized protein
D CLK_1999 conserved hypothetical protein K09931 K09931; uncharacterized protein
D CLK_0792 conserved hypothetical protein K09957 K09957; uncharacterized protein
D CLK_0789 outer surface protein K09963 K09963; uncharacterized protein
D CLK_2770 conserved hypothetical protein K09963 K09963; uncharacterized protein
D CLK_0663 conserved hypothetical protein K05967 K05967; uncharacterized protein
D CLK_0553 conserved hypothetical protein K01163 K01163; uncharacterized protein
D CLK_2372 conserved hypothetical protein K07584 ysxB; uncharacterized protein
D CLK_1796 conserved hypothetical protein K07742 ylxR; uncharacterized protein
!
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 20, 2024