+D GENES KO
#
KEGG Orthology (KO) - Chlorobium limicola
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:cli00010]
D Clim_2184 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D Clim_0975 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Clim_0452 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Clim_0557 Inositol phosphatase/fructose-16-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D Clim_1927 Fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D Clim_1253 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Clim_1670 Triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Clim_1689 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Clim_2515 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D Clim_1938 phosphoglycerate mutase 1 family K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D Clim_0186 Phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Clim_0457 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D Clim_1379 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Clim_1494 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Clim_0618 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D Clim_0204 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Clim_1123 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Clim_0203 thiamine pyrophosphate protein domain protein TPP-binding K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Clim_1124 pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Clim_2085 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Clim_0597 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Clim_2165 HAD-superfamily hydrolase, subfamily IA, variant 3 K20866 yihX; glucose-1-phosphatase [EC:3.1.3.10]
D Clim_0031 Phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
C 00020 Citrate cycle (TCA cycle) [PATH:cli00020]
D Clim_2042 citrate synthase I K01647 CS; citrate synthase [EC:2.3.3.1]
D Clim_1231 ATP-citrate lyase/succinyl-CoA ligase K15230 aclA; ATP-citrate lyase alpha-subunit [EC:2.3.3.8]
D Clim_1232 ATP-grasp domain protein K15231 aclB; ATP-citrate lyase beta-subunit [EC:2.3.3.8]
D Clim_2436 aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D Clim_0515 aconitate hydratase 2 K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D Clim_0553 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D Clim_1377 2-oxoglutarate dehydrogenase, E1 subunit K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D Clim_1378 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D Clim_1379 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Clim_1494 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Clim_0204 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Clim_1123 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Clim_0203 thiamine pyrophosphate protein domain protein TPP-binding K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Clim_1124 pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Clim_0333 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D Clim_1943 succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D Clim_1025 succinate CoA transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D Clim_2344 succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D Clim_2442 succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D Clim_2441 4Fe-4S ferredoxin iron-sulfur binding domain protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D Clim_2343 succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D Clim_2443 succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D Clim_2342 CoB--CoM heterodisulfide reductase K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D Clim_0804 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D Clim_0795 fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D Clim_1713 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D Clim_1376 Oxaloacetate decarboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D Clim_0808 biotin/lipoyl attachment domain-containing protein K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]
D Clim_0031 Phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D Clim_0618 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
C 00030 Pentose phosphate pathway [PATH:cli00030]
D Clim_0975 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Clim_2076 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D Clim_2075 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D Clim_2077 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D Clim_0469 Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D Clim_1184 Transketolase domain protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Clim_0874 Transketolase central region K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Clim_2479 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D Clim_1258 sugar-phosphate isomerase, RpiB/LacA/LacB family K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D Clim_1324 Phosphoketolase K01621 xfp; xylulose-5-phosphate/fructose-6-phosphate phosphoketolase [EC:4.1.2.9 4.1.2.22]
D Clim_1541 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D Clim_1969 short-chain dehydrogenase/reductase SDR K00034 gdh; glucose 1-dehydrogenase [EC:1.1.1.47]
D Clim_1927 Fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D Clim_1253 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Clim_0557 Inositol phosphatase/fructose-16-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D Clim_0452 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:cli00040]
D Clim_1408 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D Clim_0469 Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
C 00051 Fructose and mannose metabolism [PATH:cli00051]
D Clim_2519 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D Clim_1775 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D Clim_0319 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01840 manB; phosphomannomutase [EC:5.4.2.8]
D Clim_2199 Mannose-1-phosphate guanylyltransferase (GDP) K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D Clim_2356 Nucleotidyl transferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D Clim_0452 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Clim_0557 Inositol phosphatase/fructose-16-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D Clim_1927 Fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D Clim_1253 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Clim_1670 Triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Clim_1258 sugar-phosphate isomerase, RpiB/LacA/LacB family K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D Clim_0294 putative PTS IIA-like nitrogen-regulatory protein PtsN K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
C 00052 Galactose metabolism [PATH:cli00052]
D Clim_1776 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Clim_2184 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D Clim_0452 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00053 Ascorbate and aldarate metabolism [PATH:cli00053]
D Clim_1408 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D Clim_1588 NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D Clim_2085 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Clim_1881 HpcH/HpaI aldolase K01630 garL; 2-dehydro-3-deoxyglucarate aldolase [EC:4.1.2.20]
C 00500 Starch and sucrose metabolism [PATH:cli00500]
D Clim_2189 glycogen/starch synthase, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21]
D Clim_2378 trehalose synthase K05343 treS; maltose alpha-D-glucosyltransferase / alpha-amylase [EC:5.4.99.16 3.2.1.1]
D Clim_2379 alpha amylase catalytic region K16147 glgE; starch synthase (maltosyl-transferring) [EC:2.4.99.16]
D Clim_2184 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D Clim_0975 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Clim_2519 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:cli00520]
D Clim_2414 Beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D Clim_0158 glycoside hydrolase family 3 domain protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D Clim_2519 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D Clim_0089 glucosamine/fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Clim_0309 Nucleotidyl transferase K11528 glmU; UDP-N-acetylglucosamine pyrophosphorylase [EC:2.7.7.23]
D Clim_2355 aminoglycoside phosphotransferase K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221]
D Clim_0521 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Clim_1194 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D Clim_0797 N-acetylneuraminate synthase K01654 neuB; N-acetylneuraminate synthase [EC:2.5.1.56]
D Clim_1687 DegT/DnrJ/EryC1/StrS aminotransferase K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
D Clim_2184 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D Clim_1408 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D Clim_1776 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Clim_1588 NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D Clim_0975 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Clim_0319 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01840 manB; phosphomannomutase [EC:5.4.2.8]
D Clim_2356 Nucleotidyl transferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D Clim_2199 Mannose-1-phosphate guanylyltransferase (GDP) K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D Clim_1775 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
C 00620 Pyruvate metabolism [PATH:cli00620]
D Clim_0597 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Clim_0618 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D Clim_0204 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Clim_1123 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Clim_0203 thiamine pyrophosphate protein domain protein TPP-binding K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Clim_1124 pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Clim_1379 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Clim_1494 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Clim_1325 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D Clim_0202 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D Clim_0199 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D Clim_0198 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Clim_0403 acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D Clim_0086 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D Clim_2085 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Clim_1025 succinate CoA transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D Clim_0530 D-lactate dehydrogenase (cytochrome) K00102 LDHD; D-lactate dehydrogenase (cytochrome) [EC:1.1.2.4]
D Clim_1316 Malate dehydrogenase (oxaloacetate-decarboxylating) K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D Clim_0809 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D Clim_0886 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D Clim_0807 sodium pump decarboxylase, gamma subunit K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma
D Clim_1376 Oxaloacetate decarboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D Clim_0808 biotin/lipoyl attachment domain-containing protein K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]
D Clim_1713 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D Clim_0804 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D Clim_0795 fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D Clim_0606 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D Clim_0031 Phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D Clim_0457 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D Clim_2319 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D Clim_0735 2-isopropylmalate synthase/homocitrate synthase family protein K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D Clim_0690 homocitrate synthase K02594 nifV; homocitrate synthase NifV [EC:2.3.3.14]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:cli00630]
D Clim_0597 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Clim_1713 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D Clim_2042 citrate synthase I K01647 CS; citrate synthase [EC:2.3.3.1]
D Clim_2436 aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D Clim_0515 aconitate hydratase 2 K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D Clim_0871 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D Clim_1375 Carbamoyl-phosphate synthase L chain ATP-binding K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3]
D Clim_0868 methylmalonyl-CoA mutase, large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D Clim_0869 Methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D Clim_0824 HAD-superfamily hydrolase, subfamily IA, variant 3 K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D Clim_1752 HAD-superfamily hydrolase, subfamily IA, variant 1 K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D Clim_1987 Haloacid dehalogenase domain protein hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D Clim_1970 Ribulose-bisphosphate carboxylase K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39]
D Clim_0919 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Clim_1965 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Clim_0621 Glycine dehydrogenase (decarboxylating) K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D Clim_0163 Glycine dehydrogenase (decarboxylating) K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D Clim_0417 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Clim_1379 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Clim_1494 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Clim_0620 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D Clim_0638 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
C 00640 Propanoate metabolism [PATH:cli00640]
D Clim_0597 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Clim_0872 AMP-dependent synthetase and ligase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D Clim_1325 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D Clim_1379 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Clim_1494 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Clim_0202 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D Clim_0199 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D Clim_0198 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Clim_0403 acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D Clim_1375 Carbamoyl-phosphate synthase L chain ATP-binding K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3]
D Clim_0871 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D Clim_0868 methylmalonyl-CoA mutase, large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D Clim_0869 Methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D Clim_1943 succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D Clim_0333 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D Clim_0515 aconitate hydratase 2 K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D Clim_1144 methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
C 00650 Butanoate metabolism [PATH:cli00650]
D Clim_0809 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D Clim_0886 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D Clim_0887 biotin/lipoyl attachment domain-containing protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D Clim_0888 conserved hypothetical protein K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
D Clim_2344 succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D Clim_2442 succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D Clim_2441 4Fe-4S ferredoxin iron-sulfur binding domain protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D Clim_2343 succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D Clim_2443 succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D Clim_2342 CoB--CoM heterodisulfide reductase K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D Clim_0388 Aldehyde Dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Clim_1025 succinate CoA transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D Clim_0618 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D Clim_0204 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Clim_1123 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Clim_0203 thiamine pyrophosphate protein domain protein TPP-binding K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Clim_1124 pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Clim_0741 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Clim_0740 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:cli00660]
D Clim_0741 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Clim_0740 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D Clim_1943 succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D Clim_0333 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D Clim_0737 homoaconitate hydratase family protein K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D Clim_0736 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D Clim_0738 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:cli00562]
D Clim_0561 Inositol-phosphate phosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D Clim_1122 phytase K01083 E3.1.3.8; 3-phytase [EC:3.1.3.8]
D Clim_1670 Triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:cli00190]
D Clim_0844 NADH-ubiquinone/plastoquinone oxidoreductase chain 3 K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D Clim_0845 NADH-quinone oxidoreductase, B subunit K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D Clim_0846 NADH (or F420H2) dehydrogenase, subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D Clim_0847 NADH dehydrogenase (quinone) K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D Clim_0848 NADH dehydrogenase (quinone) K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D Clim_0849 4Fe-4S ferredoxin iron-sulfur binding domain protein K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D Clim_0850 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D Clim_0851 NADH-ubiquinone oxidoreductase chain 4L K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D Clim_0852 proton-translocating NADH-quinone oxidoreductase, chain L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D Clim_0853 proton-translocating NADH-quinone oxidoreductase, chain M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D Clim_0854 proton-translocating NADH-quinone oxidoreductase, chain N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D Clim_0734 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D Clim_1955 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D Clim_2344 succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D Clim_2442 succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D Clim_2441 4Fe-4S ferredoxin iron-sulfur binding domain protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D Clim_2343 succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D Clim_2443 succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D Clim_2342 CoB--CoM heterodisulfide reductase K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D Clim_1806 cytochrome c oxidase subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D Clim_1807 cytochrome c oxidase, cbb3-type, subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D Clim_1809 cytochrome c class I K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D Clim_1816 cytochrome bd ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D Clim_1817 cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D Clim_0434 cytochrome c, class I K08738 CYC; cytochrome c
D Clim_1289 cytochrome c class I K08738 CYC; cytochrome c
D Clim_2327 cytochrome c class I K08738 CYC; cytochrome c
D Clim_2332 ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D Clim_0029 ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D Clim_2331 ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D Clim_2488 ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D Clim_0028 H+transporting two-sector ATPase delta/epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D Clim_2489 ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D Clim_2490 ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D Clim_0793 Inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D Clim_1259 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes [PATH:cli00720]
D Clim_0618 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D Clim_0457 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D Clim_0606 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D Clim_1376 Oxaloacetate decarboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D Clim_0808 biotin/lipoyl attachment domain-containing protein K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]
D Clim_1713 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D Clim_0804 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D Clim_0795 fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D Clim_2344 succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D Clim_2442 succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D Clim_2441 4Fe-4S ferredoxin iron-sulfur binding domain protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D Clim_2343 succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D Clim_2443 succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D Clim_2342 CoB--CoM heterodisulfide reductase K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D Clim_0333 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D Clim_1943 succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D Clim_0204 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Clim_1123 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Clim_0203 thiamine pyrophosphate protein domain protein TPP-binding K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Clim_1124 pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Clim_0553 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D Clim_2436 aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D Clim_0515 aconitate hydratase 2 K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D Clim_1231 ATP-citrate lyase/succinyl-CoA ligase K15230 aclA; ATP-citrate lyase alpha-subunit [EC:2.3.3.8]
D Clim_1232 ATP-grasp domain protein K15231 aclB; ATP-citrate lyase beta-subunit [EC:2.3.3.8]
D Clim_0202 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D Clim_0199 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D Clim_0198 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Clim_0403 acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D Clim_0871 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D Clim_0868 methylmalonyl-CoA mutase, large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D Clim_0869 Methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D Clim_1112 Methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D Clim_1552 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D Clim_1325 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D Clim_0597 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:cli00680]
D Clim_1965 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Clim_0186 Phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Clim_0606 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D Clim_1713 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D Clim_1927 Fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D Clim_1253 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Clim_0557 Inositol phosphatase/fructose-16-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D Clim_0452 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Clim_1229 ferredoxin-dependent glutamate synthase K22083 mgsC; methylamine---glutamate N-methyltransferase subunit C [EC:2.1.1.21]
D Clim_1200 4Fe-4S ferredoxin iron-sulfur binding domain protein K03388 hdrA2; heterodisulfide reductase subunit A2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]
D Clim_1201 CoB--CoM heterodisulfide reductase K03389 hdrB2; heterodisulfide reductase subunit B2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]
D Clim_1199 methyl-viologen-reducing hydrogenase delta subunit K14127 mvhD; F420-non-reducing hydrogenase iron-sulfur subunit [EC:1.12.99.- 1.8.98.5 1.8.98.6]
D Clim_1325 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D Clim_0597 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Clim_1938 phosphoglycerate mutase 1 family K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D Clim_0967 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Clim_1897 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Clim_0216 phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:cli00910]
D Clim_0682 nitrogenase molybdenum-iron protein alpha chain K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
D Clim_0681 nitrogenase molybdenum-iron protein beta chain K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D Clim_0685 nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH
D Clim_1978 hybrid cluster protein K05601 hcp; hydroxylamine reductase [EC:1.7.99.1]
D Clim_1939 2-nitropropane dioxygenase NPD K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D Clim_0179 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D Clim_0919 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Clim_1937 Glutamate synthase (ferredoxin) K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D Clim_2002 glutamate synthase (NADPH), homotetrameric K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D Clim_1936 glutamate synthase, NADH/NADPH, small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
C 00920 Sulfur metabolism [PATH:cli00920]
D Clim_1215 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D Clim_1412 phosphoesterase RecJ domain protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D Clim_0008 thiosulfate-binding protein SoxY K17226 soxY; sulfur-oxidizing protein SoxY
D Clim_0009 Sulphur oxidation protein SoxZ K17227 soxZ; sulfur-oxidizing protein SoxZ
D Clim_0694 sulfite reductase, dissimilatory-type alpha subunit K11180 dsrA; dissimilatory sulfite reductase alpha subunit [EC:1.8.1.22]
D Clim_0695 sulfite reductase, dissimilatory-type beta subunit K11181 dsrB; dissimilatory sulfite reductase beta subunit [EC:1.8.1.22]
D Clim_0696 4Fe-4S ferredoxin iron-sulfur binding domain protein K27196 dsrL; dissimilatory sulfite reductase flavoprotein subunit
D Clim_0703 Nitrate reductase gamma subunit K27187 dsrM; [DsrC]-trisulfide reductase subunit M [EC:1.8.5.10]
D Clim_0704 DsrK protein K27188 dsrK; [DsrC]-trisulfide reductase subunit K [EC:1.8.5.10]
D Clim_0705 conserved hypothetical protein K27189 dsrJ; [DsrC]-trisulfide reductase subunit J
D Clim_0706 4Fe-4S ferredoxin iron-sulfur binding domain protein K27190 dsrO; [DsrC]-trisulfide reductase subunit O
D Clim_0707 Polysulphide reductase NrfD K27191 dsrP; [DsrC]-trisulfide reductase subunit P
D Clim_2405 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D Clim_1369 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D Clim_0011 Flavocytochrome c sulphide dehydrogenase flavin-binding K17229 fccB; sulfide dehydrogenase [flavocytochrome c] flavoprotein chain [EC:1.8.2.3]
D Clim_0010 cytochrome c class I K17230 fccA; cytochrome subunit of sulfide dehydrogenase
D Clim_1418 DoxX family protein K16937 doxD; thiosulfate dehydrogenase (quinone) large subunit [EC:1.8.5.2]
D Clim_2400 molybdopterin oxidoreductase K08352 phsA; thiosulfate reductase / polysulfide reductase chain A [EC:1.8.5.5]
D Clim_1845 serine acetyltransferase-like protein K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Clim_1841 transferase hexapeptide repeat containing protein K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Clim_0880 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Clim_2176 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D Clim_1824 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D Clim_0667 Cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:cli00061]
D Clim_0202 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D Clim_0199 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D Clim_0198 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Clim_0403 acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D Clim_0166 acyl carrier protein K02078 acpP; acyl carrier protein
D Clim_0168 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D Clim_0169 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D Clim_0165 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Clim_0167 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Clim_0559 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59]
D Clim_0552 enoyl-(acyl-carrier-protein) reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D Clim_1391 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Clim_2424 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:cli00071]
D Clim_1391 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Clim_2424 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Clim_2085 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:cli00561]
D Clim_2085 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Clim_0140 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D Clim_0170 fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D Clim_2417 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Clim_2335 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D Clim_1625 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 00564 Glycerophospholipid metabolism [PATH:cli00564]
D Clim_2416 Glycerol-3-phosphate dehydrogenase (NAD(P)(+)) K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D Clim_2417 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Clim_2335 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D Clim_1625 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D Clim_2310 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D Clim_0293 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D Clim_1525 CDP-diacylglycerol/serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D Clim_0625 phosphatidylserine decarboxylase related protein K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D Clim_0477 CDP-alcohol phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D Clim_1731 CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D Clim_1730 phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:cli00230]
D Clim_1541 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D Clim_1771 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D Clim_0465 phosphoribosylamine/glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D Clim_1765 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D Clim_1707 phosphoribosylglycinamide formyltransferase 2 K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21]
D Clim_1205 phosphoribosylformylglycinamidine synthase II K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D Clim_1524 phosphoribosylformylglycinamidine synthase, purS K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D Clim_1523 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D Clim_2418 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D Clim_1953 phosphoribosylaminoimidazole carboxylase, catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D Clim_1182 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D Clim_0991 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D Clim_1749 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D Clim_0353 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D Clim_0401 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D Clim_1804 purine nucleoside phosphorylase I, inosine and guanosine-specific K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D Clim_2494 protein of unknown function DUF152 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D Clim_1488 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D Clim_2180 Nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D Clim_1734 non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D Clim_0241 GMP synthase, large subunit K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D Clim_0948 glutamine amidotransferase class-I K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D Clim_0306 Guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D Clim_0539 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Clim_1057 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D Clim_0412 (p)ppGpp synthetase I, SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D Clim_2422 Ppx/GppA phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D Clim_1993 Ppx/GppA phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D Clim_0821 putative adenylate/guanylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D Clim_2196 Adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D Clim_0556 metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D Clim_1416 Nucleoside-triphosphate--adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D Clim_1861 metallophosphoesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D Clim_0839 histidine triad (HIT) protein K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53]
C 00240 Pyrimidine metabolism [PATH:cli00240]
D Clim_0467 Carbamoyl-phosphate synthase L chain ATP-binding K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D Clim_1967 Carbamoyl-phosphate synthetase large chain domain protein K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D Clim_2299 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D Clim_1788 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D Clim_1262 dihydroorotase, multifunctional complex type K01465 URA4; dihydroorotase [EC:3.5.2.3]
D Clim_1863 dihydroorotate dehydrogenase family protein K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D Clim_2148 oxidoreductase FAD/NAD(P)-binding domain protein K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D Clim_2445 dihydroorotate dehydrogenase K00226 pyrD; dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1]
D Clim_2407 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D Clim_0088 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D Clim_0426 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D Clim_2180 Nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D Clim_0960 maf protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D Clim_0105 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D Clim_0348 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D Clim_0401 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D Clim_0556 metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D Clim_1057 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D Clim_0539 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Clim_0828 CMP/dCMP deaminase zinc-binding K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D Clim_1510 dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D Clim_0903 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D Clim_0404 thymidylate synthase, flavin-dependent K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:cli00250]
D Clim_1187 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Clim_0525 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D Clim_0159 1-alkyl-2-acetylglycerophosphocholine esterase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D Clim_1803 aminotransferase class I and II K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D Clim_1654 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D Clim_0767 alanine dehydrogenase/PNT domain protein K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D Clim_1250 Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D Clim_1251 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D Clim_2196 Adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D Clim_0991 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D Clim_1788 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D Clim_0388 Aldehyde Dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Clim_1937 Glutamate synthase (ferredoxin) K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D Clim_2002 glutamate synthase (NADPH), homotetrameric K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D Clim_1936 glutamate synthase, NADH/NADPH, small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D Clim_0179 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D Clim_0919 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Clim_0467 Carbamoyl-phosphate synthase L chain ATP-binding K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D Clim_1967 Carbamoyl-phosphate synthetase large chain domain protein K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D Clim_2299 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D Clim_1523 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D Clim_0089 glucosamine/fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Clim_1771 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:cli00260]
D Clim_2419 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Clim_2330 aspartate kinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D Clim_2131 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Clim_2333 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D Clim_2334 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D Clim_1965 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Clim_1938 phosphoglycerate mutase 1 family K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D Clim_0967 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Clim_1897 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Clim_0216 phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D Clim_0621 Glycine dehydrogenase (decarboxylating) K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D Clim_0163 Glycine dehydrogenase (decarboxylating) K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D Clim_0417 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Clim_1379 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Clim_1494 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Clim_0620 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D Clim_1525 CDP-diacylglycerol/serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D Clim_2126 Pyridoxal-5'-phosphate-dependent protein beta subunit K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D Clim_0501 tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D Clim_0491 tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D Clim_0256 pyridoxal-phosphate dependent TrpB-like enzyme K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:cli00270]
D Clim_1845 serine acetyltransferase-like protein K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Clim_1841 transferase hexapeptide repeat containing protein K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Clim_0880 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Clim_2176 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D Clim_2126 Pyridoxal-5'-phosphate-dependent protein beta subunit K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D Clim_2062 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Clim_0510 Methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D Clim_1641 Methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D Clim_2494 protein of unknown function DUF152 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D Clim_1805 translation initiation factor, aIF-2BI family K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D Clim_1642 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D Clim_2419 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Clim_2330 aspartate kinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D Clim_2131 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Clim_1824 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D Clim_0667 Cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D Clim_0668 O-acetylhomoserine/O-acetylserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D Clim_1825 O-acetylhomoserine/O-acetylserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D Clim_1869 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Clim_1187 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Clim_1713 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D Clim_0967 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Clim_1897 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
C 00280 Valine, leucine and isoleucine degradation [PATH:cli00280]
D Clim_1869 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Clim_1379 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Clim_1494 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Clim_1375 Carbamoyl-phosphate synthase L chain ATP-binding K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3]
D Clim_0871 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D Clim_0868 methylmalonyl-CoA mutase, large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D Clim_0869 Methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D Clim_2085 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:cli00290]
D Clim_0737 homoaconitate hydratase family protein K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D Clim_0736 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D Clim_0738 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D Clim_0741 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Clim_0740 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D Clim_0739 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D Clim_0742 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D Clim_1869 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Clim_1803 aminotransferase class I and II K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D Clim_2319 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D Clim_0735 2-isopropylmalate synthase/homocitrate synthase family protein K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:cli00300]
D Clim_2419 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Clim_2330 aspartate kinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D Clim_2131 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Clim_0622 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D Clim_2054 Dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D Clim_0019 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D Clim_1957 acetylornithine and succinylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D Clim_0181 Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D Clim_1553 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D Clim_0073 putative transcriptional regulator, GntR family K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D Clim_2507 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D Clim_2506 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:cli00310]
D Clim_1378 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D Clim_1379 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Clim_1494 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Clim_0388 Aldehyde Dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Clim_1455 lysine 2,3-aminomutase YodO family protein K01843 kamA; lysine 2,3-aminomutase [EC:5.4.3.2]
D Clim_2085 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:cli00220]
D Clim_1248 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D Clim_1250 Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D Clim_1251 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D Clim_1523 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D Clim_0919 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Clim_0467 Carbamoyl-phosphate synthase L chain ATP-binding K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D Clim_1967 Carbamoyl-phosphate synthetase large chain domain protein K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D Clim_2299 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D Clim_0179 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D Clim_1187 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Clim_1803 aminotransferase class I and II K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D Clim_2284 GCN5-related N-acetyltransferase K00619 argA; amino-acid N-acetyltransferase [EC:2.3.1.1]
D Clim_1246 arginine biosynthesis bifunctional protein ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D Clim_1247 acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D Clim_1245 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D Clim_1957 acetylornithine and succinylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:cli00330]
D Clim_0527 arginine decarboxylase, pyruvoyl-dependent K02626 pdaD; arginine decarboxylase [EC:4.1.1.19]
D Clim_1715 Agmatine deiminase K10536 aguA; agmatine deiminase [EC:3.5.3.12]
D Clim_1717 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53]
D Clim_2085 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Clim_2306 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D Clim_1683 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D Clim_1684 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D Clim_1187 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:cli00340]
D Clim_2169 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D Clim_2012 Phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D Clim_1999 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D Clim_2000 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D Clim_1721 imidazoleglycerol phosphate synthase, cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D Clim_1631 Imidazoleglycerol-phosphate dehydratase K01089 hisB; imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15]
D Clim_1169 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Clim_0890 histidinol-phosphate phosphatase K05602 hisN; histidinol-phosphatase [EC:3.1.3.15]
D Clim_0513 Histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D Clim_2085 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Clim_1148 methyltransferase K18911 egtD; L-histidine Nalpha-methyltransferase [EC:2.1.1.44]
C 00350 Tyrosine metabolism [PATH:cli00350]
D Clim_1187 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Clim_1169 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Clim_0388 Aldehyde Dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Clim_1261 fumarylacetoacetate (FAA) hydrolase K16165 nagK; fumarylpyruvate hydrolase [EC:3.7.1.20]
C 00360 Phenylalanine metabolism [PATH:cli00360]
D Clim_0075 Phenylacetate--CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D Clim_2248 thioesterase superfamily protein K02614 paaI; acyl-CoA thioesterase [EC:3.1.2.-]
D Clim_1187 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Clim_1169 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Clim_0134 catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00380 Tryptophan metabolism [PATH:cli00380]
D Clim_1378 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D Clim_1379 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Clim_1494 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Clim_2085 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Clim_0134 catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:cli00400]
D Clim_0968 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D Clim_1886 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D Clim_0945 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D Clim_1119 3-dehydroquinate dehydratase, type II K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D Clim_0946 Shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D Clim_2123 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D Clim_0881 Chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D Clim_1674 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D Clim_0394 glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D Clim_1114 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D Clim_0631 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D Clim_1643 Phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D Clim_0468 Indole-3-glycerol-phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D Clim_0501 tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D Clim_0491 tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D Clim_0256 pyridoxal-phosphate dependent TrpB-like enzyme K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D Clim_2408 Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D Clim_0474 Prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D Clim_1187 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Clim_1169 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:cli00410]
D Clim_0310 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D Clim_2085 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Clim_0600 pantoate/beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
C 00430 Taurine and hypotaurine metabolism [PATH:cli00430]
D Clim_1654 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D Clim_0767 alanine dehydrogenase/PNT domain protein K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D Clim_1325 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:cli00450]
D Clim_0667 Cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D Clim_2062 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Clim_0814 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D Clim_0901 Thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D Clim_1190 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:cli00460]
D Clim_0159 1-alkyl-2-acetylglycerophosphocholine esterase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D Clim_1965 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:cli00470]
D Clim_2128 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D Clim_1529 D-alanine/D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Clim_1523 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D Clim_0346 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D Clim_2504 UDP-N-acetylmuramoylalanine/D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D Clim_0181 Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D Clim_1553 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:cli00480]
D Clim_1411 Leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D Clim_1330 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D Clim_1142 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D Clim_0553 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D Clim_2077 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D Clim_2076 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:cli00540]
D Clim_2185 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D Clim_0559 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59]
D Clim_1539 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D Clim_2170 metallophosphoesterase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D Clim_0342 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D Clim_0463 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D Clim_0334 KpsF/GutQ family protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D Clim_2412 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D Clim_2411 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D Clim_0796 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D Clim_2038 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D Clim_0546 Three-deoxy-D-manno-octulosonic-acid transferase domain protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D Clim_0271 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D Clim_2448 conserved hypothetical protein K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-]
D Clim_2337 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D Clim_1892 putative phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D Clim_1400 rfaE bifunctional protein K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167]
D Clim_2188 histidinol-phosphate phosphatase family protein K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D Clim_0268 rfaE bifunctional protein K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70]
D Clim_1167 ADP-L-glycero-D-manno-heptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
C 00542 O-Antigen repeat unit biosynthesis [PATH:cli00542]
D Clim_1905 glycosyl transferase family 4 K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:cli00541]
D Clim_1776 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Clim_1408 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D Clim_1588 NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D Clim_1640 Nucleotidyl transferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Clim_1781 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Clim_1778 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Clim_1780 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D Clim_1779 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D Clim_1775 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D Clim_0319 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01840 manB; phosphomannomutase [EC:5.4.2.8]
D Clim_2199 Mannose-1-phosphate guanylyltransferase (GDP) K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D Clim_0797 N-acetylneuraminate synthase K01654 neuB; N-acetylneuraminate synthase [EC:2.5.1.56]
D Clim_1687 DegT/DnrJ/EryC1/StrS aminotransferase K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
C 00550 Peptidoglycan biosynthesis [PATH:cli00550]
D Clim_0521 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Clim_1194 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D Clim_2501 UDP-N-acetylmuramate/alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D Clim_2504 UDP-N-acetylmuramoylalanine/D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D Clim_2507 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D Clim_1529 D-alanine/D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Clim_2506 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D Clim_0331 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D Clim_1735 undecaprenol kinase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Clim_2505 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D Clim_2502 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D Clim_2326 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D Clim_0242 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Clim_0531 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D Clim_2508 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 00552 Teichoic acid biosynthesis [PATH:cli00552]
D Clim_1735 undecaprenol kinase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Clim_1905 glycosyl transferase family 4 K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D Clim_1834 glycosyl transferase, WecB/TagA/CpsF family K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:cli00543]
D Clim_0279 glycosyl transferase group 1 K16703 wcaL; colanic acid/amylovoran/stewartan biosynthesis glycosyltransferase WcaL/AmsK/CpsK [EC:2.4.-.-]
D Clim_1905 glycosyl transferase family 4 K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D Clim_1845 serine acetyltransferase-like protein K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Clim_1841 transferase hexapeptide repeat containing protein K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Clim_0880 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:cli00730]
D Clim_1669 thiamine biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D Clim_1407 phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D Clim_2175 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Clim_0664 biotin and thiamin synthesis associated K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19]
D Clim_1729 deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D Clim_0665 thiazole biosynthesis family protein K03149 thiG; thiazole synthase [EC:2.8.1.10]
D Clim_1405 thiamine monophosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D Clim_1406 thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D Clim_0258 thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D Clim_0387 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D Clim_2240 GTPase EngC K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D Clim_2447 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D Clim_1416 Nucleoside-triphosphate--adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:cli00740]
D Clim_1966 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D Clim_0829 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D Clim_0178 3,4-dihydroxy-2-butanone 4-phosphate synthase K02858 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12]
D Clim_2336 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D Clim_0835 riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D Clim_0303 riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D Clim_1065 cob(II)yrinic acid a,c-diamide reductase K04719 bluB; 5,6-dimethylbenzimidazole synthase [EC:1.13.11.79]
C 00750 Vitamin B6 metabolism [PATH:cli00750]
D Clim_0541 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D Clim_1733 pyridoxal phosphate biosynthetic protein PdxJ K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D Clim_2334 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:cli00760]
D Clim_0525 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D Clim_0535 quinolinate synthetase complex, A subunit K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D Clim_2139 nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D Clim_1804 purine nucleoside phosphorylase I, inosine and guanosine-specific K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D Clim_0401 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D Clim_2485 nicotinate (nicotinamide) nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D Clim_0524 NAD+ synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D Clim_2409 ATP-NAD/AcoX kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D Clim_0388 Aldehyde Dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:cli00770]
D Clim_0741 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Clim_0740 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D Clim_0739 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D Clim_0742 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D Clim_1526 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D Clim_0600 pantoate/beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D Clim_0944 putative transcriptional acitvator, Baf family K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D Clim_0266 phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D Clim_1186 pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D Clim_1100 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D Clim_2138 holo-acyl-carrier-protein synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D Clim_0059 4'-phosphopantetheinyl transferase K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D Clim_1869 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Clim_0310 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D Clim_2085 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:cli00780]
D Clim_2427 biotin biosynthesis protein BioC K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D Clim_0165 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Clim_0167 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Clim_0552 enoyl-(acyl-carrier-protein) reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D Clim_2428 protein of unknown function DUF452 K09789 bioG; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85]
D Clim_2429 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D Clim_2152 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D Clim_2425 adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D Clim_2426 dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D Clim_1451 conserved hypothetical protein K01012 bioB; biotin synthase [EC:2.8.1.6]
D Clim_2430 Biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D Clim_2431 biotin/acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:cli00785]
D Clim_1527 biotin/lipoate A/B protein ligase K23734 lipM; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D Clim_1213 lipoic acid synthetase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D Clim_1379 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Clim_1494 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Clim_1377 2-oxoglutarate dehydrogenase, E1 subunit K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D Clim_1378 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D Clim_0621 Glycine dehydrogenase (decarboxylating) K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D Clim_0163 Glycine dehydrogenase (decarboxylating) K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D Clim_0417 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Clim_0620 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:cli00790]
D Clim_0859 GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D Clim_2447 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D Clim_2140 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D Clim_2141 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D Clim_1985 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D Clim_0322 FolC bifunctional protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D Clim_1966 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D Clim_1992 para-aminobenzoate synthase, subunit I K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
D Clim_0860 6-pyruvoyl tetrahydropterin synthase and hypothetical protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D Clim_1666 6-pyruvoyl tetrahydropterin synthase and hypothetical protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D Clim_1125 transcriptional coactivator/pterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D Clim_0368 short-chain dehydrogenase/reductase SDR K03793 PTR1; pteridine reductase [EC:1.5.1.33]
D Clim_1820 short-chain dehydrogenase/reductase SDR K17745 spr1; sepiapterin reductase [EC:1.1.1.325]
D Clim_1766 Radical SAM domain protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D Clim_0499 exsB protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D Clim_0608 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D Clim_0249 beta-lactamase domain protein K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105]
D Clim_0672 molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D Clim_2309 molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D Clim_2308 molybdenum cofactor synthesis domain protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
C 00670 One carbon pool by folate [PATH:cli00670]
D Clim_1112 Methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D Clim_1965 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Clim_1765 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D Clim_1749 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D Clim_1678 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D Clim_0417 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Clim_2062 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Clim_0404 thymidylate synthase, flavin-dependent K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D Clim_0638 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D Clim_1552 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D Clim_1260 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:cli00860]
D Clim_0359 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Clim_0894 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D Clim_2394 glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D Clim_0882 Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D Clim_0893 porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D Clim_0892 Uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D Clim_2341 uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D Clim_1952 oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D Clim_0884 amine oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15]
D Clim_2010 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D Clim_0709 uroporphyrin-III C-methyltransferase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
D Clim_1009 uroporphyrin-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D Clim_0708 siroheme synthase K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76]
D Clim_1010 anaerobic cobalt chelatase K02190 cbiK; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D Clim_1011 precorrin-2 C20-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151]
D Clim_1013 precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196]
D Clim_0692 cobyrinic acid a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D Clim_0252 cobyrinic acid a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D Clim_1018 Cobaltochelatase K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2]
D Clim_1022 Cobaltochelatase K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2]
D Clim_1069 cob(I)alamin adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D Clim_1066 cobyric acid synthase CobQ K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D Clim_1068 cobalamin biosynthesis protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D Clim_1078 Adenosylcobinamide-phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D Clim_1081 cobalamin 5'-phosphate synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D Clim_1072 Xylose isomerase domain protein TIM barrel K25496 cbiR; adenosylcobalamin phosphodiesterase
D Clim_1079 nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D Clim_1067 L-threonine-O-3-phosphate decarboxylase K04720 cobD; threonine-phosphate decarboxylase [EC:4.1.1.81]
D Clim_2156 magnesium chelatase, H subunit K03403 chlH; magnesium chelatase subunit H [EC:6.6.1.1]
D Clim_2154 magnesium chelatase, H subunit K03403 chlH; magnesium chelatase subunit H [EC:6.6.1.1]
D Clim_1492 magnesium chelatase ATPase subunit D K03404 chlD; magnesium chelatase subunit D [EC:6.6.1.1]
D Clim_1020 cobaltochelatase subunit K03404 chlD; magnesium chelatase subunit D [EC:6.6.1.1]
D Clim_1493 magnesium chelatase ATPase subunit I K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1]
D Clim_1021 Magnesium chelatase K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1]
D Clim_2157 magnesium protoporphyrin O-methyltransferase K03428 bchM; magnesium-protoporphyrin O-methyltransferase [EC:2.1.1.11]
D Clim_2158 magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase K04034 bchE; anaerobic magnesium-protoporphyrin IX monomethyl ester cyclase [EC:1.21.98.3]
D Clim_0952 coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein K21231 bciB; 3,8-divinyl protochlorophyllide a 8-vinyl-reductase (ferredoxin) [EC:1.3.7.13]
D Clim_1791 coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein K21231 bciB; 3,8-divinyl protochlorophyllide a 8-vinyl-reductase (ferredoxin) [EC:1.3.7.13]
D Clim_2191 bacteriochlorophyll 4-vinyl reductase K04036 bchJ; divinyl protochlorophyllide a 8-vinyl-reductase [EC:1.-.-.-]
D Clim_2192 light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein K04037 chlL; light-independent protochlorophyllide reductase subunit L [EC:1.3.7.7]
D Clim_2194 light-independent protochlorophyllide reductase, N subunit K04038 chlN; light-independent protochlorophyllide reductase subunit N [EC:1.3.7.7]
D Clim_2193 light-independent protochlorophyllide reductase, B subunit K04039 chlB; light-independent protochlorophyllide reductase subunit B [EC:1.3.7.7]
D Clim_0630 bacteriochlorophyll/chlorophyll synthetase K04040 chlG; chlorophyll/bacteriochlorophyll a synthase [EC:2.5.1.62 2.5.1.133]
D Clim_1155 bacteriochlorophyll/chlorophyll synthetase K04040 chlG; chlorophyll/bacteriochlorophyll a synthase [EC:2.5.1.62 2.5.1.133]
D Clim_0897 chlorophyllide reductase iron protein subunit X K11333 bchX; 3,8-divinyl chlorophyllide a/chlorophyllide a reductase subunit X [EC:1.3.7.14 1.3.7.15]
D Clim_2035 chlorophyllide reductase subunit Y K11334 bchY; 3,8-divinyl chlorophyllide a/chlorophyllide a reductase subunit Y [EC:1.3.7.14 1.3.7.15]
D Clim_0157 chlorophyllide reductase subunit Z K11335 bchZ; 3,8-divinyl chlorophyllide a/chlorophyllide a reductase subunit Z [EC:1.3.7.14 1.3.7.15]
D Clim_0899 2-vinyl bacteriochlorophyllide hydratase K11336 bchF; 3-vinyl bacteriochlorophyllide hydratase [EC:4.2.1.165]
D Clim_0898 chlorophyll synthesis pathway, BchC K11337 bchC; bacteriochlorophyllide a dehydrogenase [EC:1.1.1.396]
D Clim_0022 geranylgeranyl reductase K10960 chlP; geranylgeranyl diphosphate/geranylgeranyl-bacteriochlorophyllide a reductase [EC:1.3.1.83 1.3.1.111]
D Clim_1212 conserved hypothetical protein K21058 bciC; chlorophyllide a hydrolase [EC:3.1.1.100]
D Clim_1516 Radical SAM domain protein K13602 bchR; bacteriochlorophyllide d C-12(1)-methyltransferase [EC:2.1.1.331]
D Clim_1975 Radical SAM domain protein K13601 bchQ; bacteriochlorophyllide d C-8(2)-methyltransferase [EC:2.1.1.332]
D Clim_1974 2-vinyl bacteriochlorophyllide hydratase K13603 bchV; 3-vinyl bacteriochlorophyllide hydratase [EC:4.2.1.169]
D Clim_2496 C-20 methyltransferase BchU K13604 bchU; bacteriochlorophyllide d C-20 methyltransferase [EC:2.1.1.333]
D Clim_2172 bacteriochlorophyll/chlorophyll synthetase K13605 bchK; bacteriochlorophyll c synthase [EC:2.5.1.-]
D Clim_0092 Ferritin Dps family protein K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:cli00130]
D Clim_2013 ubiquinone/menaquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D Clim_2047 isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D Clim_2048 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D Clim_2049 alpha/beta hydrolase fold K08680 menH; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [EC:4.2.99.20]
D Clim_2051 Mandelate racemase/muconate lactonizing protein K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D Clim_2052 O-succinylbenzoate-CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D Clim_2050 naphthoate synthase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D Clim_1515 thioesterase superfamily protein K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D Clim_1718 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:cli00900]
D Clim_1729 deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D Clim_0085 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D Clim_1514 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D Clim_1700 4-diphosphocytidyl-2C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D Clim_0188 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D Clim_0345 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D Clim_0316 isopentenyl-diphosphate delta-isomerase, type 2 K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D Clim_0315 Polyprenyl synthetase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D Clim_1103 Polyprenyl synthetase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D Clim_0331 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D Clim_0022 geranylgeranyl reductase K10960 chlP; geranylgeranyl diphosphate/geranylgeranyl-bacteriochlorophyllide a reductase [EC:1.3.1.83 1.3.1.111]
D Clim_1716 Ste24 endopeptidase K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:cli00906]
D Clim_1585 Squalene/phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D Clim_0877 Carotene 7,8-desaturase K02293 PDS; 15-cis-phytoene desaturase [EC:1.3.5.5]
D Clim_0916 Carotene 7,8-desaturase K00514 ZDS; zeta-carotene desaturase [EC:1.3.5.6]
D Clim_0766 amine oxidase K09835 crtISO; prolycopene isomerase [EC:5.2.1.13]
D Clim_2017 conserved hypothetical protein K14605 cruA; lycopene cyclase CruA [EC:5.5.1.19]
D Clim_1747 Rieske (2Fe-2S) domain protein K09879 crtU; carotenoid phi-ring synthase / carotenoid chi-ring synthase [EC:1.3.99.39 1.3.99.40]
D Clim_0360 hydroxyneurosporene synthase K09844 crtC; carotenoid 1,2-hydratase [EC:4.2.1.131]
D Clim_2168 glycosyl transferase family 2 K14597 cruC; chlorobactene glucosyltransferase
D Clim_1188 phospholipid/glycerol acyltransferase K14598 cruD; chlorobactene lauroyltransferase
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
D Clim_2085 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D Clim_1184 Transketolase domain protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Clim_0874 Transketolase central region K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:cli00523]
D Clim_1640 Nucleotidyl transferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Clim_1781 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Clim_1778 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Clim_1780 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D Clim_1779 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D Clim_2047 isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
C 01055 Biosynthesis of vancomycin group antibiotics
D Clim_1778 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:cli00332]
D Clim_1683 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D Clim_1684 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:cli00261]
D Clim_2419 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Clim_2330 aspartate kinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D Clim_2131 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Clim_0622 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D Clim_2054 Dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:cli00521]
D Clim_2184 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D Clim_0561 Inositol-phosphate phosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D Clim_1640 Nucleotidyl transferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Clim_1781 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Clim_1778 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Clim_1780 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D Clim_1779 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D Clim_2184 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:cli00525]
D Clim_1640 Nucleotidyl transferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Clim_1781 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Clim_1778 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:cli00401]
D Clim_2408 Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D Clim_1187 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Clim_1169 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D Clim_1674 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D Clim_0394 glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D Clim_0168 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D Clim_0167 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Clim_0552 enoyl-(acyl-carrier-protein) reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D Clim_0166 acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites
D Clim_0510 Methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D Clim_1641 Methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:cli00362]
D Clim_1608 short-chain dehydrogenase/reductase SDR K07535 badH; 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase [EC:1.1.1.-]
D Clim_0809 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D Clim_0886 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D Clim_0887 biotin/lipoyl attachment domain-containing protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D Clim_0888 conserved hypothetical protein K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
C 00627 Aminobenzoate degradation
D Clim_0086 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:cli00625]
D Clim_2085 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Clim_0681 nitrogenase molybdenum-iron protein beta chain K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D Clim_0685 nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH
D Clim_0682 nitrogenase molybdenum-iron protein alpha chain K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation [PATH:cli00633]
D Clim_1438 NADH:flavin oxidoreductase/NADH oxidase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
D Clim_0856 nickel-dependent hydrogenase large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D Clim_0855 hydrogenase (NiFe) small subunit HydA K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
D Clim_0694 sulfite reductase, dissimilatory-type alpha subunit K11180 dsrA; dissimilatory sulfite reductase alpha subunit [EC:1.8.1.22]
D Clim_0695 sulfite reductase, dissimilatory-type beta subunit K11181 dsrB; dissimilatory sulfite reductase beta subunit [EC:1.8.1.22]
D Clim_0696 4Fe-4S ferredoxin iron-sulfur binding domain protein K27196 dsrL; dissimilatory sulfite reductase flavoprotein subunit
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:cli03020]
D Clim_0196 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D Clim_0197 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D Clim_2202 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:cli03010]
D Clim_0349 RNA binding S1 domain protein K02945 RP-S1; small subunit ribosomal protein S1
D Clim_0424 ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D Clim_2223 ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D Clim_2203 ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D Clim_2212 ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D Clim_0147 ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D Clim_2233 ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D Clim_2215 ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D Clim_0423 ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D Clim_2230 ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D Clim_2204 ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D Clim_2234 ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D Clim_2205 ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D Clim_2216 ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D Clim_0304 ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D Clim_1398 ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D Clim_2220 ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D Clim_0149 ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D Clim_2225 ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D Clim_0320 ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D Clim_2124 ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D Clim_0193 ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D Clim_2226 ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D Clim_2229 ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D Clim_2228 ribosomal protein L4/L1e K02926 RP-L4; large subunit ribosomal protein L4
D Clim_2217 ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D Clim_2214 ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D Clim_0195 ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D Clim_0150 ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D Clim_0194 ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D Clim_0192 ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D Clim_0422 ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D Clim_2219 ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D Clim_2210 ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D Clim_2222 ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D Clim_2201 ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D Clim_2213 ribosomal protein L18P/L5E K02881 RP-L18; large subunit ribosomal protein L18
D Clim_1395 ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D Clim_0153 ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D Clim_1711 ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D Clim_2224 ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D Clim_2227 Ribosomal protein L25/L23 K02892 RP-L23; large subunit ribosomal protein L23
D Clim_2218 ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D Clim_1542 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 K02897 RP-L25; large subunit ribosomal protein L25
D Clim_1712 ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D Clim_0629 ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D Clim_2221 ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D Clim_2211 ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D Clim_0385 ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D Clim_0171 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D Clim_1554 ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D Clim_2524 ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D Clim_0154 ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D Clim_2206 ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D Clim_R0003 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Clim_R0008 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Clim_R0011 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Clim_R0006 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Clim_R0007 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Clim_R0012 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:cli00970]
D Clim_R0005 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Clim_R0010 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Clim_R0048 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Clim_R0054 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Clim_R0045 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Clim_R0053 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Clim_R0026 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Clim_R0031 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Clim_R0013 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D Clim_R0051 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D Clim_R0035 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D Clim_R0025 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Clim_R0047 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Clim_R0043 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Clim_R0027 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Clim_R0052 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Clim_R0040 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Clim_R0024 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Clim_R0044 tRNA-His K14226 tRNA-His; tRNA His
D Clim_R0004 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Clim_R0009 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Clim_R0019 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Clim_R0029 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Clim_R0021 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Clim_R0030 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Clim_R0041 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Clim_R0042 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Clim_R0020 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Clim_R0049 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Clim_R0039 tRNA-Met K14230 tRNA-Met; tRNA Met
D Clim_R0028 tRNA-Met K14230 tRNA-Met; tRNA Met
D Clim_R0033 tRNA-Met K14230 tRNA-Met; tRNA Met
D Clim_R0022 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D Clim_R0018 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Clim_R0046 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Clim_R0032 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Clim_R0038 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Clim_R0023 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Clim_R0036 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Clim_R0037 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Clim_R0016 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Clim_R0001 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Clim_R0014 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Clim_R0017 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D Clim_R0015 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D Clim_R0050 tRNA-Val K14237 tRNA-Val; tRNA Val
D Clim_R0002 tRNA-Val K14237 tRNA-Val; tRNA Val
D Clim_R0034 tRNA-Val K14237 tRNA-Val; tRNA Val
D Clim_0359 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Clim_0332 glutamyl-tRNA(Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D Clim_2287 glutamyl-tRNA(Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D Clim_2041 glutamyl-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D Clim_0206 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Clim_1519 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Clim_0023 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D Clim_0156 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Clim_1823 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Clim_2198 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Clim_1190 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Clim_1678 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D Clim_0406 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Clim_0598 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Clim_1773 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Clim_1586 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D Clim_2484 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Clim_1696 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Clim_0295 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Clim_0152 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Clim_1635 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Clim_0528 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Clim_2482 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:cli03060]
D Clim_2209 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D Clim_0190 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D Clim_1629 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D Clim_0013 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D Clim_0012 protein-export membrane protein SecD K12257 secDF; SecD/SecF fusion protein
D Clim_2298 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D Clim_2521 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Clim_1206 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Clim_1399 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Clim_0259 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Clim_0966 arsenite-activated ATPase ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D Clim_2143 arsenite-activated ATPase ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D Clim_0551 arsenite-activated ATPase ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D Clim_2364 arsenite-activated ATPase ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D Clim_0078 arsenite-activated ATPase ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D Clim_2147 arsenite-activated ATPase ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D Clim_0624 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA
D Clim_1102 Sec-independent protein translocase, TatC subunit K03118 tatC; sec-independent protein translocase protein TatC
D Clim_1676 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D Clim_1798 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D Clim_1909 hypothetical protein K13280 SEC11; signal peptidase I [EC:3.4.21.89]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:cli04122]
D Clim_2175 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Clim_0038 SirA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D Clim_0701 sulfur relay protein TusB/DsrH K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D Clim_0700 sulfur relay protein TusC/DsrF K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D Clim_0699 sulfur relay protein TusD/DsrE K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D Clim_2060 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D Clim_0672 molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D Clim_1149 Rhodanese domain protein K21028 ynjE; molybdopterin synthase sulfurtransferase [EC:2.8.1.11]
D Clim_0663 UBA/THIF-type NAD/FAD binding protein K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D Clim_2309 molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D Clim_0666 thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein
C 03050 Proteasome
C 03018 RNA degradation [PATH:cli03018]
D Clim_0186 Phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Clim_0599 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D Clim_0544 DEAD/DEAH box helicase domain protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D Clim_0482 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D Clim_1854 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D Clim_0041 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D Clim_0323 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D Clim_1632 RNA binding metal dependent phosphohydrolase K18682 rny; ribonucrease Y [EC:3.1.-.-]
D Clim_0452 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Clim_0761 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Clim_0498 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Clim_1259 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D Clim_0992 polynucleotide adenylyltransferase/metal dependent phosphohydrolase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:cli03030]
D Clim_1265 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Clim_1445 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Clim_0812 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Clim_1870 DNA-directed DNA polymerase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Clim_2150 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Clim_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Clim_0264 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D Clim_1964 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D Clim_0148 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Clim_2149 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Clim_0628 Ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D Clim_0017 Ribonuclease H K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D Clim_0473 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Clim_2016 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D Clim_0006 cyclic nucleotide-binding protein K02319 pol; DNA polymerase, archaea type [EC:2.7.7.7]
C 03410 Base excision repair [PATH:cli03410]
D Clim_1208 8-oxoguanine DNA glycosylase domain protein K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
D Clim_1990 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D Clim_1393 HhH-GPD family protein K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D Clim_2057 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D Clim_0265 phage SPO1 DNA polymerase-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D Clim_0146 exodeoxyribonuclease III Xth K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D Clim_1768 apurinic endonuclease Apn1 K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D Clim_0473 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Clim_0558 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Clim_2016 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:cli03420]
D Clim_0770 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D Clim_0495 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D Clim_0455 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D Clim_0411 excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B
D Clim_1795 excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D Clim_0547 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Clim_0473 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Clim_2016 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:cli03430]
D Clim_1709 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D Clim_1732 Smr protein/MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D Clim_2328 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D Clim_0547 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Clim_2037 exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D Clim_2286 Exonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D Clim_0558 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Clim_0148 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Clim_2149 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Clim_0812 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Clim_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Clim_2150 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Clim_1870 DNA-directed DNA polymerase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Clim_1265 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Clim_1445 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Clim_2016 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:cli03440]
D Clim_0558 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Clim_0148 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Clim_2149 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Clim_0003 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D Clim_2393 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D Clim_0876 recombination protein RecR K06187 recR; recombination protein RecR
D Clim_2133 recA protein K03553 recA; recombination protein RecA
D Clim_0473 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Clim_0321 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D Clim_0616 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D Clim_0476 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D Clim_0386 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Clim_2269 putative transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Clim_2462 putative transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Clim_0785 putative transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Clim_1467 putative transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Clim_1359 exodeoxyribonuclease V, beta subunit K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D Clim_1360 exodeoxyribonuclease V, gamma subunit K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D Clim_1358 exodeoxyribonuclease V, alpha subunit K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D Clim_0947 helicase, RecD/TraA family K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D Clim_0812 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Clim_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Clim_2150 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Clim_1870 DNA-directed DNA polymerase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Clim_1265 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Clim_1445 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Clim_1417 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:cli02010]
D Clim_0675 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D Clim_0374 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D Clim_0674 binding-protein-dependent transport systems inner membrane component K02018 modB; molybdate transport system permease protein
D Clim_0372 molybdate ABC transporter, inner membrane subunit K02018 modB; molybdate transport system permease protein
D Clim_0371 ABC transporter related K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D Clim_1739 Mammalian cell entry related domain protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D Clim_1737 protein of unknown function DUF140 K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D Clim_1738 ABC transporter related K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D Clim_1268 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D Clim_0458 inner-membrane translocator K23536 nupC; general nucleoside transport system permease protein
D Clim_1108 ABC transporter related K23537 nupA; general nucleoside transport system ATP-binding protein
D Clim_1620 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D Clim_1621 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D Clim_0376 periplasmic phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D Clim_1619 phosphate ABC transporter, inner membrane subunit PstC K02037 pstC; phosphate transport system permease protein
D Clim_0377 phosphate ABC transporter, inner membrane subunit PstC K02037 pstC; phosphate transport system permease protein
D Clim_1618 phosphate ABC transporter, inner membrane subunit PstA K02038 pstA; phosphate transport system permease protein
D Clim_0378 phosphate ABC transporter, inner membrane subunit PstA K02038 pstA; phosphate transport system permease protein
D Clim_1617 phosphate ABC transporter, ATPase subunit K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D Clim_0379 phosphate ABC transporter, ATPase subunit K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D Clim_2317 periplasmic solute binding protein K09815 znuA; zinc transport system substrate-binding protein
D Clim_2315 ABC-3 protein K09816 znuB; zinc transport system permease protein
D Clim_2316 ABC transporter related K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D Clim_1061 cobalt transport protein K02009 cbiN; cobalt/nickel transport protein
D Clim_1060 cobalamin biosynthesis protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein
D Clim_2005 cobalamin (vitamin B12) biosynthesis CbiM protein K02007 cbiM; cobalt/nickel transport system permease protein
D Clim_1062 cobalt ABC transporter, inner membrane subunit CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D Clim_2006 cobalt ABC transporter, inner membrane subunit CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D Clim_1063 cobalt ABC transporter, ATPase subunit K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D Clim_2007 ABC transporter related K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D Clim_0317 protein of unknown function DUF214 K09808 lolC_E; lipoprotein-releasing system permease protein
D Clim_1242 protein of unknown function DUF214 K09808 lolC_E; lipoprotein-releasing system permease protein
D Clim_1241 protein of unknown function DUF214 K09808 lolC_E; lipoprotein-releasing system permease protein
D Clim_1685 ABC transporter related K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D Clim_2018 ABC transporter related K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D Clim_1627 permease YjgP/YjgQ family protein K07091 lptF; lipopolysaccharide export system permease protein
D Clim_0409 permease YjgP/YjgQ family protein K11720 lptG; lipopolysaccharide export system permease protein
D Clim_2117 ABC transporter related K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D Clim_1769 protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein
D Clim_0540 ABC transporter related K09812 ftsE; cell division transport system ATP-binding protein
D Clim_0272 ABC transporter related K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D Clim_1706 ABC transporter related K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D Clim_0318 ABC transporter related K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D Clim_1659 cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporter K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D Clim_2275 ABC transporter related K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D Clim_0661 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D Clim_1944 ABC transporter related K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
C 02060 Phosphotransferase system (PTS) [PATH:cli02060]
D Clim_0263 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D Clim_2283 Phosphotransferase system, phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D Clim_0294 putative PTS IIA-like nitrogen-regulatory protein PtsN K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
C 03070 Bacterial secretion system [PATH:cli03070]
D Clim_1531 outer membrane efflux protein K12340 tolC; outer membrane protein
D Clim_0071 outer membrane efflux protein K12340 tolC; outer membrane protein
D Clim_2350 outer membrane efflux protein K12340 tolC; outer membrane protein
D Clim_1282 outer membrane efflux protein K12340 tolC; outer membrane protein
D Clim_1946 outer membrane efflux protein K12340 tolC; outer membrane protein
D Clim_1658 secretion protein HlyD family protein K11003 hlyD; membrane fusion protein, hemolysin D
D Clim_1659 cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporter K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D Clim_0012 protein-export membrane protein SecD K12257 secDF; SecD/SecF fusion protein
D Clim_0013 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D Clim_0190 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D Clim_1629 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D Clim_2209 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D Clim_2298 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D Clim_2521 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Clim_1206 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Clim_0259 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Clim_1399 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Clim_0624 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA
D Clim_1102 Sec-independent protein translocase, TatC subunit K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:cli02020]
D Clim_0773 multi-sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D Clim_0772 two component transcriptional regulator, winged helix family K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D Clim_2447 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D Clim_1620 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D Clim_1621 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D Clim_0376 periplasmic phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D Clim_1673 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D Clim_1292 integral membrane sensor signal transduction histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D Clim_1746 Osmosensitive K channel His kinase sensor K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D Clim_1743 potassium-transporting ATPase, A subunit K01546 kdpA; potassium-transporting ATPase potassium-binding subunit
D Clim_1744 K+-transporting ATPase, B subunit K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]
D Clim_1745 Potassium-transporting ATPase K01548 kdpC; potassium-transporting ATPase KdpC subunit
D Clim_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D Clim_1272 peptidase M15D vanX D-ala-D-ala dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D Clim_1044 HpcH/HpaI aldolase K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D Clim_1316 Malate dehydrogenase (oxaloacetate-decarboxylating) K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D Clim_1074 conserved hypothetical protein K07346 fimC; fimbrial chaperone protein
D Clim_0095 nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1
D Clim_0919 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Clim_0689 transcriptional regulator, NifA subfamily, Fis Family K02584 nifA; Nif-specific regulatory protein
D Clim_1833 sigma54 specific transcriptional regulator, Fis family K07713 zraR; two-component system, NtrC family, response regulator HydG
D Clim_1116 RNA polymerase, sigma 54 subunit, RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D Clim_1742 multi-sensor signal transduction histidine kinase K11383 kinB; two-component system, NtrC family, sensor histidine kinase KinB [EC:2.7.13.3]
D Clim_1741 two component, sigma54 specific, transcriptional regulator, Fis family K11384 algB; two-component system, NtrC family, response regulator AlgB
D Clim_0855 hydrogenase (NiFe) small subunit HydA K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
D Clim_0856 nickel-dependent hydrogenase large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D Clim_0857 Ni/Fe-hydrogenase, b-type cytochrome subunit K03620 hyaC; Ni/Fe-hydrogenase 1 B-type cytochrome subunit
D Clim_1600 MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D Clim_0484 integral membrane sensor hybrid histidine kinase K10916 cqsS; two-component system, CAI-1 autoinducer sensor kinase/phosphatase CqsS [EC:2.7.13.3 3.1.3.-]
D Clim_0885 integral membrane sensor hybrid histidine kinase K10916 cqsS; two-component system, CAI-1 autoinducer sensor kinase/phosphatase CqsS [EC:2.7.13.3 3.1.3.-]
D Clim_0434 cytochrome c, class I K08738 CYC; cytochrome c
D Clim_1289 cytochrome c class I K08738 CYC; cytochrome c
D Clim_2327 cytochrome c class I K08738 CYC; cytochrome c
D Clim_1806 cytochrome c oxidase subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D Clim_1807 cytochrome c oxidase, cbb3-type, subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D Clim_1809 cytochrome c class I K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D Clim_1816 cytochrome bd ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D Clim_1817 cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D Clim_1531 outer membrane efflux protein K12340 tolC; outer membrane protein
D Clim_0071 outer membrane efflux protein K12340 tolC; outer membrane protein
D Clim_2350 outer membrane efflux protein K12340 tolC; outer membrane protein
D Clim_1282 outer membrane efflux protein K12340 tolC; outer membrane protein
D Clim_1946 outer membrane efflux protein K12340 tolC; outer membrane protein
D Clim_1842 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D Clim_0391 protein tyrosine phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D Clim_0688 histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:cli02024]
D Clim_0485 aminotransferase class I and II K10915 cqsA; CAI-1 autoinducer synthase [EC:2.3.-.-]
D Clim_0484 integral membrane sensor hybrid histidine kinase K10916 cqsS; two-component system, CAI-1 autoinducer sensor kinase/phosphatase CqsS [EC:2.7.13.3 3.1.3.-]
D Clim_0885 integral membrane sensor hybrid histidine kinase K10916 cqsS; two-component system, CAI-1 autoinducer sensor kinase/phosphatase CqsS [EC:2.7.13.3 3.1.3.-]
D Clim_1674 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D Clim_0394 glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D Clim_0968 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D Clim_1971 deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase K08321 lsrF; 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase [EC:2.3.1.245]
D Clim_1665 outer membrane adhesin like proteiin K20276 bapA; large repetitive protein
D Clim_1391 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Clim_2424 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Clim_0829 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D Clim_1431 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D Clim_0614 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Clim_0900 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Clim_0615 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Clim_1543 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Clim_0771 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Clim_0602 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Clim_2521 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Clim_0012 protein-export membrane protein SecD K12257 secDF; SecD/SecF fusion protein
D Clim_0190 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D Clim_1629 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D Clim_2209 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D Clim_2298 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D Clim_1206 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Clim_0259 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Clim_1399 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:cli02030]
D Clim_1600 MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
C 02040 Flagellar assembly [PATH:cli02040]
D Clim_0407 RNA polymerase, sigma 32 subunit, RpoH K03086 rpoD; RNA polymerase primary sigma factor
D Clim_1116 RNA polymerase, sigma 54 subunit, RpoN K03092 rpoN; RNA polymerase sigma-54 factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D Clim_0186 Phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:cli04980]
D Clim_0867 LAO/AO transport system ATPase K07588 MMAA; GTPase [EC:3.6.5.-]
D Clim_0868 methylmalonyl-CoA mutase, large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D Clim_0869 Methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D Clim_2062 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:cli01501]
D Clim_2414 Beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D Clim_0158 glycoside hydrolase family 3 domain protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D Clim_1433 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Clim_2011 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Clim_1431 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D Clim_1531 outer membrane efflux protein K12340 tolC; outer membrane protein
D Clim_0071 outer membrane efflux protein K12340 tolC; outer membrane protein
D Clim_2350 outer membrane efflux protein K12340 tolC; outer membrane protein
D Clim_1282 outer membrane efflux protein K12340 tolC; outer membrane protein
D Clim_1946 outer membrane efflux protein K12340 tolC; outer membrane protein
D Clim_0242 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Clim_0531 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D Clim_2508 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D Clim_1276 Beta-lactamase K17838 oxa; beta-lactamase class D [EC:3.5.2.6]
C 01502 Vancomycin resistance [PATH:cli01502]
D Clim_1272 peptidase M15D vanX D-ala-D-ala dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D Clim_1529 D-alanine/D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Clim_2128 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D Clim_2506 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D Clim_2505 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D Clim_2502 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:cli01503]
D Clim_2432 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Clim_1673 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D Clim_1433 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Clim_2011 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Clim_1531 outer membrane efflux protein K12340 tolC; outer membrane protein
D Clim_0071 outer membrane efflux protein K12340 tolC; outer membrane protein
D Clim_2350 outer membrane efflux protein K12340 tolC; outer membrane protein
D Clim_1282 outer membrane efflux protein K12340 tolC; outer membrane protein
D Clim_1946 outer membrane efflux protein K12340 tolC; outer membrane protein
D Clim_2185 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:cli01000]
C 01001 Protein kinases [BR:cli01001]
D Clim_1104 PASTA domain containing protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D Clim_0109 HipA domain protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D Clim_0210 HipA domain protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D Clim_0237 HipA domain protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D Clim_1474 HipA domain protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D Clim_1839 putative anti-sigma regulatory factor, serine/threonine protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D Clim_0974 putative anti-sigma regulatory factor, serine/threonine protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D Clim_1906 capsular exopolysaccharide family K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D Clim_1844 uncharacterized protein involved in exopolysaccharide biosynthesis K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D Clim_0773 multi-sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D Clim_1292 integral membrane sensor signal transduction histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D Clim_1746 Osmosensitive K channel His kinase sensor K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D Clim_1742 multi-sensor signal transduction histidine kinase K11383 kinB; two-component system, NtrC family, sensor histidine kinase KinB [EC:2.7.13.3]
D Clim_1831 multi-sensor signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D Clim_0484 integral membrane sensor hybrid histidine kinase K10916 cqsS; two-component system, CAI-1 autoinducer sensor kinase/phosphatase CqsS [EC:2.7.13.3 3.1.3.-]
D Clim_0885 integral membrane sensor hybrid histidine kinase K10916 cqsS; two-component system, CAI-1 autoinducer sensor kinase/phosphatase CqsS [EC:2.7.13.3 3.1.3.-]
D Clim_0688 histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:cli01009]
D Clim_1642 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D Clim_0452 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Clim_0800 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG
D Clim_0216 phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:cli01002]
D Clim_1798 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D Clim_0858 hydrogenase maturation protease K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-]
D Clim_1193 peptidase C14 caspase catalytic subunit p20 K22684 MCA1; metacaspase-1 [EC:3.4.22.-]
D Clim_0241 GMP synthase, large subunit K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D Clim_0948 glutamine amidotransferase class-I K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D Clim_1274 NLP/P60 protein K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13]
D Clim_2420 NLP/P60 protein K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13]
D Clim_1771 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D Clim_1937 Glutamate synthase (ferredoxin) K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D Clim_0089 glucosamine/fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Clim_2069 Peptidoglycan-binding domain 1 protein K21470 ycbB; L,D-transpeptidase YcbB
D Clim_0292 Abortive infection protein K07052 K07052; CAAX protease family protein
D Clim_1503 Abortive infection protein K07052 K07052; CAAX protease family protein
D Clim_0500 Abortive infection protein K07052 K07052; CAAX protease family protein
D Clim_1330 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D Clim_1272 peptidase M15D vanX D-ala-D-ala dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D Clim_1411 Leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D Clim_1142 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D Clim_2208 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D Clim_0632 peptidase M24 K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D Clim_0087 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D Clim_0358 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D Clim_1716 Ste24 endopeptidase K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
D Clim_1447 HtpX domain protein K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D Clim_0084 membrane-associated zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D Clim_1230 peptidase M50 K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D Clim_1673 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D Clim_1498 Prolyl oligopeptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26]
D Clim_0405 ATP-dependent Clp protease, proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D Clim_1676 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D Clim_1909 hypothetical protein K13280 SEC11; signal peptidase I [EC:3.4.21.89]
D Clim_1403 carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D Clim_1217 carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D Clim_0020 carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D Clim_1252 carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D Clim_0603 signal peptide peptidase SppA, 36K type K04773 sppA; protease IV [EC:3.4.21.-]
D Clim_2516 Rhomboid family protein K07059 K07059; rhomboid family protein
D Clim_0027 Muramoyltetrapeptide carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D Clim_1117 20S proteasome A and B subunits K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D Clim_2093 peptidase U32 K08303 prtC; U32 family peptidase [EC:3.4.-.-]
C 01003 Glycosyltransferases [BR:cli01003]
D Clim_0184 Dolichyl-phosphate beta-D-mannosyltransferase K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D Clim_0285 glycosyl transferase group 1 K13668 pimB; phosphatidyl-myo-inositol dimannoside synthase [EC:2.4.1.346]
D Clim_2189 glycogen/starch synthase, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21]
D Clim_2326 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D Clim_0242 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Clim_1834 glycosyl transferase, WecB/TagA/CpsF family K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D Clim_1905 glycosyl transferase family 4 K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D Clim_0279 glycosyl transferase group 1 K16703 wcaL; colanic acid/amylovoran/stewartan biosynthesis glycosyltransferase WcaL/AmsK/CpsK [EC:2.4.-.-]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:cli01005]
D Clim_2185 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D Clim_0342 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D Clim_0559 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59]
D Clim_1539 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D Clim_2170 metallophosphoesterase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D Clim_0463 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D Clim_0271 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D Clim_0546 Three-deoxy-D-manno-octulosonic-acid transferase domain protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D Clim_2448 conserved hypothetical protein K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-]
D Clim_2412 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D Clim_2038 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D Clim_2411 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D Clim_0796 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D Clim_0334 KpsF/GutQ family protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D Clim_1400 rfaE bifunctional protein K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167]
D Clim_0268 rfaE bifunctional protein K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70]
D Clim_2337 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D Clim_1892 putative phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D Clim_2188 histidinol-phosphate phosphatase family protein K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D Clim_1167 ADP-L-glycero-D-manno-heptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D Clim_1905 glycosyl transferase family 4 K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D Clim_1879 NAD-dependent epimerase/dehydratase K19997 gnu; GlcNAc-P-P-Und epimerase [EC:5.1.3.26]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:cli01011]
D Clim_0521 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Clim_1194 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D Clim_2501 UDP-N-acetylmuramate/alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D Clim_2504 UDP-N-acetylmuramoylalanine/D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D Clim_2507 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D Clim_1529 D-alanine/D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Clim_2128 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D Clim_0346 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D Clim_0027 Muramoyltetrapeptide carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D Clim_2505 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D Clim_2502 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D Clim_1735 undecaprenol kinase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Clim_0242 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Clim_0531 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D Clim_2508 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D Clim_2326 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D Clim_2069 Peptidoglycan-binding domain 1 protein K21470 ycbB; L,D-transpeptidase YcbB
D Clim_1272 peptidase M15D vanX D-ala-D-ala dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D Clim_1274 NLP/P60 protein K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13]
D Clim_2420 NLP/P60 protein K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13]
D Clim_0965 Lytic transglycosylase catalytic K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D Clim_2514 aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D Clim_2366 rare lipoprotein A K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D Clim_2450 rare lipoprotein A K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D Clim_2367 rare lipoprotein A K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D Clim_2432 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:cli01004]
D Clim_0168 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D Clim_0169 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D Clim_0165 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Clim_0167 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Clim_0559 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59]
D Clim_0552 enoyl-(acyl-carrier-protein) reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D Clim_0597 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Clim_0872 AMP-dependent synthetase and ligase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D Clim_1391 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Clim_2424 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Clim_0170 fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D Clim_2417 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Clim_2335 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D Clim_1625 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:cli01006]
D Clim_0315 Polyprenyl synthetase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D Clim_1103 Polyprenyl synthetase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D Clim_0331 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D Clim_1585 Squalene/phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D Clim_0959 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D Clim_1718 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D Clim_0630 bacteriochlorophyll/chlorophyll synthetase K04040 chlG; chlorophyll/bacteriochlorophyll a synthase [EC:2.5.1.62 2.5.1.133]
D Clim_1155 bacteriochlorophyll/chlorophyll synthetase K04040 chlG; chlorophyll/bacteriochlorophyll a synthase [EC:2.5.1.62 2.5.1.133]
D Clim_2172 bacteriochlorophyll/chlorophyll synthetase K13605 bchK; bacteriochlorophyll c synthase [EC:2.5.1.-]
C 01007 Amino acid related enzymes [BR:cli01007]
D Clim_0359 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Clim_0528 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Clim_2482 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D Clim_2198 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Clim_2484 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Clim_1190 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Clim_1773 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Clim_0406 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Clim_0598 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Clim_1586 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D Clim_1519 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Clim_0295 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Clim_0023 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D Clim_1823 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Clim_1696 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Clim_0156 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Clim_0206 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Clim_0152 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Clim_1635 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Clim_1187 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Clim_1803 aminotransferase class I and II K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D Clim_1203 aminotransferase class I and II K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-]
D Clim_1558 aminotransferase class I and II K10907 K10907; aminotransferase [EC:2.6.1.-]
D Clim_1169 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Clim_2429 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D Clim_2152 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D Clim_1957 acetylornithine and succinylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D Clim_2425 adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D Clim_2394 glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D Clim_1869 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Clim_1992 para-aminobenzoate synthase, subunit I K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
D Clim_1687 DegT/DnrJ/EryC1/StrS aminotransferase K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:cli00194]
D Clim_0362 Cytochrome b/b6 domain K02635 petB; cytochrome b6
D Clim_0361 Plastoquinol--plastocyanin reductase K02636 petC; cytochrome b6-f complex iron-sulfur subunit [EC:7.1.1.6]
D Clim_0028 H+transporting two-sector ATPase delta/epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D Clim_0029 ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D Clim_2331 ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D Clim_2332 ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D Clim_2488 ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D Clim_2489 ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D Clim_2490 ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D Clim_0182 photosystem P840 reaction center, large subunit K08940 pscA; photosystem P840 reaction center large subunit
D Clim_0183 4Fe-4S ferredoxin iron-sulfur binding domain protein K08941 pscB; photosystem P840 reaction center iron-sulfur protein
D Clim_0607 photosystem P840 reaction center cytochrome c-551 K08942 pscC; photosystem P840 reaction center cytochrome c551
D Clim_0758 photosystem P840 reaction center protein PscD K08943 pscD; photosystem P840 reaction center protein PscD
D Clim_1704 bacteriochlorophyll A protein K08944 fmoA; bacteriochlorophyll A protein
D Clim_2145 bacteriochlorophyll C binding protein K08945 csmA; chlorosome envelope protein A
D Clim_2354 chlorosome envelope protein B K08946 csmB; chlorosome envelope protein B
D Clim_2146 chlorosome envelope protein C K08947 csmC; chlorosome envelope protein C
D Clim_2359 bacteriochlorophyll C binding protein K08949 csmE; chlorosome envelope protein E
D Clim_1140 conserved hypothetical protein K08950 csmF; chlorosome envelope protein F
D Clim_0905 chlorosome envelope protein H K08951 csmH; chlorosome envelope protein H
D Clim_1580 ferredoxin K08952 csmI; chlorosome envelope protein I
D Clim_0768 ferredoxin K08953 csmJ; chlorosome envelope protein J
D Clim_0769 ferredoxin K08954 csmX; chlorosome envelope protein X
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:cli03000]
D Clim_1434 transcriptional regulator, AraC family K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D Clim_0918 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D Clim_2318 ferric uptake regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D Clim_1680 ferric uptake regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D Clim_0135 ferric uptake regulator, Fur family K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D Clim_0480 ferric uptake regulator, Fur family K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D Clim_2026 transcriptional regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D Clim_2324 transcriptional regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D Clim_0131 transcriptional regulator, ArsR family K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D Clim_1565 iron (metal) dependent repressor, DtxR family K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D Clim_2431 biotin/acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D Clim_1337 transcriptional regulator, XRE family K13655 mqsA; HTH-type transcriptional regulator / antitoxin MqsA
D Clim_0072 transcriptional regulator, NifA subfamily, Fis Family K15836 fhlA; formate hydrogenlyase transcriptional activator
D Clim_0689 transcriptional regulator, NifA subfamily, Fis Family K02584 nifA; Nif-specific regulatory protein
D Clim_0673 transcriptional regulator, ModE family K02019 modE; molybdate transport system regulatory protein
D Clim_2028 transcriptional regulator, XRE family K07726 K07726; putative transcriptional regulator
D Clim_2003 putative transcriptional regulator, CopG family K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator
D Clim_1339 CopG domain protein DNA-binding domain protein K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
D Clim_2351 protein of unknown function DUF156 K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D Clim_2055 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Clim_1589 NusG antitermination factor K05785 rfaH; transcriptional antiterminator RfaH
D Clim_1249 arginine repressor, ArgR K03402 argR; transcriptional regulator of arginine metabolism
D Clim_1693 heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D Clim_0777 protein of unknown function DUF179 K07735 algH; putative transcriptional regulator
D Clim_1772 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor
D Clim_2511 protein of unknown function UPF0040 K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:cli03021]
D Clim_2202 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D Clim_0196 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D Clim_0197 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D Clim_0407 RNA polymerase, sigma 32 subunit, RpoH K03086 rpoD; RNA polymerase primary sigma factor
D Clim_0340 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D Clim_1116 RNA polymerase, sigma 54 subunit, RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D Clim_0299 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA
D Clim_1988 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB
D Clim_0191 NusG antitermination factor K02601 nusG; transcription termination/antitermination protein NusG
D Clim_1832 putative PAS/PAC sensor protein K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D Clim_1838 anti-sigma-factor antagonist K04749 rsbV; anti-sigma B factor antagonist
D Clim_1836 anti-sigma-factor antagonist K04749 rsbV; anti-sigma B factor antagonist
D Clim_1839 putative anti-sigma regulatory factor, serine/threonine protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D Clim_0974 putative anti-sigma regulatory factor, serine/threonine protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D Clim_0990 Positive regulator of sigma(E) RseC/MucC K03803 rseC; sigma-E factor negative regulatory protein RseC
D Clim_1772 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor
D Clim_1672 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D Clim_0323 transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:cli03019]
D Clim_0018 ribonuclease, Rne/Rng family K08301 rng; ribonuclease G [EC:3.1.26.-]
D Clim_0164 Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D Clim_1632 RNA binding metal dependent phosphohydrolase K18682 rny; ribonucrease Y [EC:3.1.-.-]
D Clim_0482 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D Clim_0544 DEAD/DEAH box helicase domain protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D Clim_1854 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D Clim_0041 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D Clim_0186 Phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Clim_0599 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D Clim_0323 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D Clim_0452 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Clim_0761 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Clim_0498 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Clim_1259 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D Clim_0992 polynucleotide adenylyltransferase/metal dependent phosphohydrolase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
C 03041 Spliceosome
C 03011 Ribosome [BR:cli03011]
D Clim_0349 RNA binding S1 domain protein K02945 RP-S1; small subunit ribosomal protein S1
D Clim_0424 ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D Clim_2223 ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D Clim_2203 ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D Clim_2212 ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D Clim_0147 ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D Clim_2233 ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D Clim_2215 ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D Clim_0423 ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D Clim_2230 ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D Clim_2204 ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D Clim_2234 ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D Clim_2205 ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D Clim_2216 ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D Clim_0304 ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D Clim_1398 ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D Clim_2220 ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D Clim_0149 ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D Clim_2225 ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D Clim_0320 ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D Clim_2124 ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D Clim_0193 ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D Clim_2226 ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D Clim_2229 ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D Clim_2228 ribosomal protein L4/L1e K02926 RP-L4; large subunit ribosomal protein L4
D Clim_2217 ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D Clim_2214 ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D Clim_0150 ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D Clim_0194 ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D Clim_0192 ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D Clim_0195 ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D Clim_0422 ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D Clim_2219 ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D Clim_2210 ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D Clim_2222 ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D Clim_2201 ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D Clim_2213 ribosomal protein L18P/L5E K02881 RP-L18; large subunit ribosomal protein L18
D Clim_1395 ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D Clim_0153 ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D Clim_1711 ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D Clim_2224 ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D Clim_2227 Ribosomal protein L25/L23 K02892 RP-L23; large subunit ribosomal protein L23
D Clim_2218 ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D Clim_1712 ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D Clim_0629 ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D Clim_2221 ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D Clim_2211 ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D Clim_0385 ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D Clim_0171 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D Clim_1554 ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D Clim_2524 ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D Clim_0154 ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D Clim_2206 ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D Clim_1542 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 K02897 RP-L25; large subunit ribosomal protein L25
D Clim_R0007 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Clim_R0012 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Clim_R0003 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Clim_R0008 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Clim_R0011 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Clim_R0006 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:cli03009]
D Clim_0164 Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D Clim_0350 GTP-binding protein Era K03595 era; GTPase
D Clim_2285 GTP-binding protein Obg/CgtA K03979 obgE; GTPase [EC:3.6.5.-]
D Clim_1772 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor
D Clim_0299 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA
D Clim_1988 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB
D Clim_0191 NusG antitermination factor K02601 nusG; transcription termination/antitermination protein NusG
D Clim_0873 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D Clim_1826 sun protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D Clim_1185 Protein of unknown function methylase putative K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D Clim_2182 protein of unknown function DUF558 K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D Clim_2200 methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D Clim_2510 S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D Clim_0601 Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D Clim_0619 RNA methyltransferase, TrmH family, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D Clim_1096 Protein of unknown function methylase putative K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D Clim_1414 radical SAM enzyme, Cfr family K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D Clim_2518 RNA methyltransferase, TrmA family K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D Clim_1997 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D Clim_1495 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D Clim_1397 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D Clim_1592 MiaB-like tRNA modifying enzyme YliG K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D Clim_2421 ribosomal L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D Clim_0018 ribonuclease, Rne/Rng family K08301 rng; ribonuclease G [EC:3.1.26.-]
D Clim_2406 Holliday junction resolvase YqgF K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D Clim_1854 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D Clim_0387 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D Clim_2240 GTPase EngC K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D Clim_0421 small GTP-binding protein K03977 engA; GTPase
D Clim_1584 GTP-binding proten HflX K03665 hflX; GTPase
D Clim_1995 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D Clim_0412 (p)ppGpp synthetase I, SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D Clim_0301 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D Clim_0298 protein of unknown function DUF150 K09748 rimP; ribosome maturation factor RimP
D Clim_0102 iojap-like protein K09710 ybeB; ribosome-associated protein
D Clim_1583 protein of unknown function UPF0054 K07042 ybeY; probable rRNA maturation factor
D Clim_0612 putative sigma 54 modulation protein/ribosomal protein S30EA K05808 hpf; ribosome hibernation promoting factor
D Clim_0347 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase
D Clim_0172 protein of unknown function DUF177 K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:cli03016]
D Clim_0359 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Clim_1696 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Clim_1773 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Clim_0598 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Clim_1190 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Clim_2484 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Clim_1586 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D Clim_1519 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Clim_0206 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Clim_0023 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D Clim_0156 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Clim_1823 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Clim_2198 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Clim_0406 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Clim_0295 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Clim_0152 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Clim_1635 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Clim_0528 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Clim_2482 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D Clim_2039 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D Clim_2437 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D Clim_1453 tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D Clim_0964 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D Clim_0302 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D Clim_2175 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Clim_1995 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D Clim_0959 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D Clim_2373 tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D Clim_0007 glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D Clim_1215 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D Clim_2523 ribonuclease P K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D Clim_1132 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D Clim_2082 YbaK/prolyl-tRNA synthetase associated region K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
D Clim_1942 CMP/dCMP deaminase zinc-binding K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D Clim_2132 TIM-barrel protein, nifR3 family K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D Clim_2173 RNA modification enzyme, MiaB family K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D Clim_0352 RNA modification enzyme, MiaB family K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D Clim_1396 tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D Clim_0817 tRNA guanosine-2'-O-methyltransferase K00556 trmH; tRNA (guanosine-2'-O-)-methyltransferase [EC:2.1.1.34]
D Clim_2090 tRNA/rRNA methyltransferase (SpoU) K03437 spoU; RNA methyltransferase, TrmH family
D Clim_2060 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D Clim_0038 SirA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D Clim_0701 sulfur relay protein TusB/DsrH K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D Clim_0700 sulfur relay protein TusC/DsrF K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D Clim_0699 sulfur relay protein TusD/DsrE K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D Clim_0514 S-adenosylmethionine/tRNA-ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D Clim_1513 S-adenosylmethionine/tRNA-ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D Clim_0499 exsB protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D Clim_0860 6-pyruvoyl tetrahydropterin synthase and hypothetical protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D Clim_1666 6-pyruvoyl tetrahydropterin synthase and hypothetical protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D Clim_1766 Radical SAM domain protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D Clim_0608 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D Clim_1748 domain of unknown function DUF1730 K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D Clim_1591 queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D Clim_0626 tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D Clim_0101 peptidase M22 glycoprotease K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D Clim_0100 protein of unknown function UPF0079 K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D Clim_0482 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D Clim_0599 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D Clim_0066 PilT protein domain protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
C 03012 Translation factors [BR:cli03012]
D Clim_0300 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D Clim_0155 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D Clim_1948 ABC transporter related K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D Clim_0425 translation elongation factor Ts K02357 tsf; elongation factor Ts
D Clim_2231 translation elongation factor Tu K02358 tuf; elongation factor Tu
D Clim_0185 small GTP-binding protein K02355 fusA; elongation factor G
D Clim_2232 translation elongation factor G K02355 fusA; elongation factor G
D Clim_0083 peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D Clim_0384 ribosome recycling factor K02838 frr; ribosome recycling factor
D Clim_1694 protein-(glutamine-N5) methyltransferase, release factor-specific K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D Clim_1172 Aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D Clim_2207 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D Clim_0200 translation elongation factor P K02356 efp; elongation factor P
D Clim_2380 peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D Clim_0791 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
D Clim_2164 Class I peptide chain release factor K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:cli03110]
D Clim_2289 AAA ATPase central domain protein K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D Clim_2413 ATPase AAA-2 domain protein K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D Clim_0255 ATPase AAA-2 domain protein K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D Clim_1934 ATP-dependent Clp protease, ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D Clim_1118 heat shock protein HslVU, ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D Clim_0800 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG
D Clim_0761 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Clim_0498 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Clim_1691 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D Clim_1692 GrpE protein K03687 GRPE; molecular chaperone GrpE
D Clim_0762 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein
D Clim_2159 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein
D Clim_0497 chaperonin Cpn10 K04078 groES; chaperonin GroES
D Clim_0534 chaperonin Cpn10 K04078 groES; chaperonin GroES
D Clim_1673 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D Clim_0087 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D Clim_0358 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D Clim_1074 conserved hypothetical protein K07346 fimC; fimbrial chaperone protein
D Clim_1787 hydrogenase nickel insertion protein HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D Clim_1786 hydrogenase accessory protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB
D Clim_0262 PpiC-type peptidyl-prolyl cis-trans isomerase K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D Clim_0014 SurA domain K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D Clim_0813 thioredoxin K03671 TXN; thioredoxin
D Clim_0862 thioredoxin K03671 TXN; thioredoxin
D Clim_1093 thioredoxin K05838 ybbN; putative thioredoxin
D Clim_1312 Protein-disulfide reductase K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16]
C 04131 Membrane trafficking [BR:cli04131]
D Clim_2180 Nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D Clim_1237 protein of unknown function UPF0016 K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D Clim_0966 arsenite-activated ATPase ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D Clim_2143 arsenite-activated ATPase ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D Clim_0551 arsenite-activated ATPase ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D Clim_2364 arsenite-activated ATPase ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D Clim_0078 arsenite-activated ATPase ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D Clim_2147 arsenite-activated ATPase ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D Clim_1927 Fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D Clim_1689 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Clim_1938 phosphoglycerate mutase 1 family K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D Clim_0800 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG
D Clim_1522 major facilitator superfamily MFS_1 K06902 UMF1; MFS transporter, UMF1 family
C 04121 Ubiquitin system [BR:cli04121]
C 03051 Proteasome [BR:cli03051]
D Clim_0800 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:cli03032]
D Clim_0628 Ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D Clim_0201 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Clim_0356 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Clim_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D Clim_0264 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D Clim_1964 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D Clim_0148 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Clim_2149 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Clim_0812 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Clim_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Clim_2150 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Clim_1870 DNA-directed DNA polymerase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Clim_1265 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Clim_1445 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Clim_0017 Ribonuclease H K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D Clim_0473 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Clim_2016 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D Clim_0006 cyclic nucleotide-binding protein K02319 pol; DNA polymerase, archaea type [EC:2.7.7.7]
D Clim_0103 DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D Clim_0015 DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D Clim_2433 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:cli03036]
D Clim_0164 Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D Clim_1927 Fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D Clim_0519 histone family protein nucleoid-structuring protein H-NS K03746 hns; DNA-binding protein H-NS
D Clim_0490 hypothetical protein K03746 hns; DNA-binding protein H-NS
D Clim_0201 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Clim_0356 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Clim_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D Clim_0918 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D Clim_1986 chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D Clim_0097 chromosome segregation and condensation protein ScpA K05896 scpA; segregation and condensation protein A
D Clim_1998 segregation and condensation protein B K06024 scpB; segregation and condensation protein B
D Clim_2499 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D Clim_0540 ABC transporter related K09812 ftsE; cell division transport system ATP-binding protein
D Clim_2508 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D Clim_0418 cell divisionFtsK/SpoIIIE K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D Clim_2500 Polypeptide-transport-associated domain protein FtsQ-type K03589 ftsQ; cell division protein FtsQ
D Clim_2503 cell cycle protein K03588 ftsW; cell division protein FtsW
D Clim_1769 protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein
D Clim_2498 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Clim_1633 conserved hypothetical protein K09888 zapA; cell division protein ZapA
D Clim_2432 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Clim_1433 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Clim_2011 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Clim_0512 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D Clim_2238 cell shape determining protein MreB/Mrl K03569 mreB; rod shape-determining protein MreB and related proteins
D Clim_0533 Rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D Clim_0532 conserved hypothetical protein K03571 mreD; rod shape-determining protein MreD
D Clim_0351 rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D Clim_2056 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein
D Clim_1270 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein
D Clim_2055 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Clim_0007 glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D Clim_2200 methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D Clim_0611 integrase family protein K03733 xerC; integrase/recombinase XerC
D Clim_1827 tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D Clim_0221 integrase domain protein SAM domain protein K04763 xerD; integrase/recombinase XerD
D Clim_0420 protein of unknown function DUF59 K03593 mrp; ATP-binding protein involved in chromosome partitioning
D Clim_2197 GTP-binding protein HSR1-related K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:cli03400]
D Clim_1435 methylated-DNA/protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D Clim_1364 Deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D Clim_2057 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D Clim_1393 HhH-GPD family protein K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D Clim_1208 8-oxoguanine DNA glycosylase domain protein K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
D Clim_1990 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D Clim_1138 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D Clim_1790 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D Clim_0428 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D Clim_0996 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D Clim_0903 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D Clim_0265 phage SPO1 DNA polymerase-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D Clim_0146 exodeoxyribonuclease III Xth K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D Clim_1768 apurinic endonuclease Apn1 K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D Clim_0558 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Clim_2016 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D Clim_0473 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Clim_0495 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D Clim_0455 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D Clim_0411 excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B
D Clim_1795 excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D Clim_0547 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Clim_0196 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D Clim_0197 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D Clim_2202 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D Clim_0770 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D Clim_1709 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D Clim_1732 Smr protein/MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D Clim_2328 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D Clim_2037 exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D Clim_2286 Exonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D Clim_0812 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Clim_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Clim_2150 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Clim_1870 DNA-directed DNA polymerase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Clim_1265 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Clim_1445 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Clim_0148 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Clim_2149 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Clim_1359 exodeoxyribonuclease V, beta subunit K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D Clim_1360 exodeoxyribonuclease V, gamma subunit K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D Clim_1358 exodeoxyribonuclease V, alpha subunit K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D Clim_0947 helicase, RecD/TraA family K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D Clim_2133 recA protein K03553 recA; recombination protein RecA
D Clim_0321 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D Clim_0616 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D Clim_0476 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D Clim_1417 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D Clim_1315 SMC domain protein K03546 sbcC; DNA repair protein SbcC/Rad50
D Clim_1319 nuclease SbcCD, D subunit K03547 sbcD; DNA repair protein SbcD/Mre11
D Clim_1111 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D Clim_0003 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D Clim_0386 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Clim_2269 putative transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Clim_2462 putative transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Clim_0785 putative transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Clim_1467 putative transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Clim_2393 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D Clim_0876 recombination protein RecR K06187 recR; recombination protein RecR
D Clim_0623 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D Clim_0445 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D Clim_0929 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D Clim_0927 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D Clim_0103 DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D Clim_0015 DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D Clim_2433 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D Clim_0201 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Clim_0356 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Clim_0041 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D Clim_0519 histone family protein nucleoid-structuring protein H-NS K03746 hns; DNA-binding protein H-NS
D Clim_0490 hypothetical protein K03746 hns; DNA-binding protein H-NS
D Clim_0759 DNA-directed DNA polymerase K03502 umuC; DNA polymerase V
D Clim_2468 DNA-damage-inducible protein D K14623 dinD; DNA-damage-inducible protein D
D Clim_0427 regulatory protein RecX K03565 recX; regulatory protein
D Clim_1544 NUDIX hydrolase K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58]
D Clim_0539 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Clim_1412 phosphoesterase RecJ domain protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:cli03029]
D Clim_0300 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D Clim_0155 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D Clim_0425 translation elongation factor Ts K02357 tsf; elongation factor Ts
D Clim_2231 translation elongation factor Tu K02358 tuf; elongation factor Tu
D Clim_0185 small GTP-binding protein K02355 fusA; elongation factor G
D Clim_2232 translation elongation factor G K02355 fusA; elongation factor G
D Clim_0350 GTP-binding protein Era K03595 era; GTPase
D Clim_0528 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Clim_0598 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Clim_1519 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Clim_0023 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D Clim_2484 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Clim_0332 glutamyl-tRNA(Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D Clim_2287 glutamyl-tRNA(Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D Clim_2041 glutamyl-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D Clim_0148 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Clim_2149 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Clim_0330 outer membrane protein assembly complex, YaeT protein K07277 SAM50; outer membrane protein insertion porin family
D Clim_0761 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Clim_1692 GrpE protein K03687 GRPE; molecular chaperone GrpE
D Clim_0498 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Clim_0497 chaperonin Cpn10 K04078 groES; chaperonin GroES
D Clim_0534 chaperonin Cpn10 K04078 groES; chaperonin GroES
D Clim_1691 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D Clim_2175 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Clim_1723 NADH:ubiquinone oxidoreductase complex I intermediate-associated protein 30 K18159 NDUFAF1; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 1
D Clim_0420 protein of unknown function DUF59 K03593 mrp; ATP-binding protein involved in chromosome partitioning
D Clim_2521 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Clim_0800 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:cli02000]
D Clim_0272 ABC transporter related K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D Clim_1706 ABC transporter related K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D Clim_0318 ABC transporter related K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D Clim_1659 cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporter K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D Clim_1915 ABC transporter related K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D Clim_2275 ABC transporter related K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D Clim_0661 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D Clim_1944 ABC transporter related K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D Clim_1500 ABC transporter related K15738 uup; ABC transport system ATP-binding/permease protein
D Clim_0675 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D Clim_0374 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D Clim_0674 binding-protein-dependent transport systems inner membrane component K02018 modB; molybdate transport system permease protein
D Clim_0372 molybdate ABC transporter, inner membrane subunit K02018 modB; molybdate transport system permease protein
D Clim_0371 ABC transporter related K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D Clim_1268 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D Clim_0458 inner-membrane translocator K23536 nupC; general nucleoside transport system permease protein
D Clim_1108 ABC transporter related K23537 nupA; general nucleoside transport system ATP-binding protein
D Clim_1234 conserved hypothetical protein K02069 STAR2; UDP-glucose/iron transport system permease protein
D Clim_1235 ABC transporter related K02068 STAR1; UDP-glucose/iron transport system ATP-binding protein
D Clim_1739 Mammalian cell entry related domain protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D Clim_1737 protein of unknown function DUF140 K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D Clim_1738 ABC transporter related K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D Clim_1620 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D Clim_1621 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D Clim_0376 periplasmic phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D Clim_1619 phosphate ABC transporter, inner membrane subunit PstC K02037 pstC; phosphate transport system permease protein
D Clim_0377 phosphate ABC transporter, inner membrane subunit PstC K02037 pstC; phosphate transport system permease protein
D Clim_1618 phosphate ABC transporter, inner membrane subunit PstA K02038 pstA; phosphate transport system permease protein
D Clim_0378 phosphate ABC transporter, inner membrane subunit PstA K02038 pstA; phosphate transport system permease protein
D Clim_1617 phosphate ABC transporter, ATPase subunit K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D Clim_0379 phosphate ABC transporter, ATPase subunit K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D Clim_0614 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Clim_0900 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Clim_0615 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Clim_1543 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Clim_0771 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Clim_0602 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Clim_0995 periplasmic binding protein K25034 btuF; cobalamin transport system substrate-binding protein
D Clim_1006 putative iron complex transport system substrate-binding protein K25034 btuF; cobalamin transport system substrate-binding protein
D Clim_1024 putative iron complex transport system substrate-binding protein K25034 btuF; cobalamin transport system substrate-binding protein
D Clim_1003 periplasmic binding protein K25034 btuF; cobalamin transport system substrate-binding protein
D Clim_1070 transport system permease protein K25027 btuC; cobalamin transport system permease protein
D Clim_1004 transport system permease protein K25027 btuC; cobalamin transport system permease protein
D Clim_1005 ABC transporter related K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8]
D Clim_1071 ABC transporter related K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8]
D Clim_2317 periplasmic solute binding protein K09815 znuA; zinc transport system substrate-binding protein
D Clim_2315 ABC-3 protein K09816 znuB; zinc transport system permease protein
D Clim_2316 ABC transporter related K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D Clim_1061 cobalt transport protein K02009 cbiN; cobalt/nickel transport protein
D Clim_1062 cobalt ABC transporter, inner membrane subunit CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D Clim_2006 cobalt ABC transporter, inner membrane subunit CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D Clim_1060 cobalamin biosynthesis protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein
D Clim_2005 cobalamin (vitamin B12) biosynthesis CbiM protein K02007 cbiM; cobalt/nickel transport system permease protein
D Clim_1063 cobalt ABC transporter, ATPase subunit K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D Clim_2007 ABC transporter related K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D Clim_1627 permease YjgP/YjgQ family protein K07091 lptF; lipopolysaccharide export system permease protein
D Clim_0409 permease YjgP/YjgQ family protein K11720 lptG; lipopolysaccharide export system permease protein
D Clim_2117 ABC transporter related K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D Clim_0317 protein of unknown function DUF214 K09808 lolC_E; lipoprotein-releasing system permease protein
D Clim_1242 protein of unknown function DUF214 K09808 lolC_E; lipoprotein-releasing system permease protein
D Clim_1241 protein of unknown function DUF214 K09808 lolC_E; lipoprotein-releasing system permease protein
D Clim_1685 ABC transporter related K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D Clim_2018 ABC transporter related K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D Clim_1769 protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein
D Clim_0540 ABC transporter related K09812 ftsE; cell division transport system ATP-binding protein
D Clim_2321 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D Clim_1574 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Clim_2322 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Clim_1534 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Clim_1535 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Clim_1280 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Clim_1420 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Clim_1421 ABC transporter related K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Clim_1279 ABC transporter related K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Clim_1533 ABC transporter related K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Clim_1626 hypothetical protein K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D Clim_1668 PUCC protein K08226 pucC; MFS transporter, BCD family, chlorophyll transporter
D Clim_0068 drug resistance transporter, EmrB/QacA subfamily K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D Clim_1522 major facilitator superfamily MFS_1 K06902 UMF1; MFS transporter, UMF1 family
D Clim_0429 major facilitator superfamily MFS_1 K08369 ydjE; MFS transporter, putative metabolite:H+ symporter
D Clim_0263 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D Clim_2283 Phosphotransferase system, phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D Clim_0294 putative PTS IIA-like nitrogen-regulatory protein PtsN K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D Clim_1151 MIP family channel protein K06188 aqpZ; aquaporin Z
D Clim_2339 Ion transport protein K10716 kch; voltage-gated potassium channel
D Clim_0094 ammonium transporter K03320 amt; ammonium transporter, Amt family
D Clim_0973 ammonium transporter K03320 amt; ammonium transporter, Amt family
D Clim_2291 von Willebrand factor type A K07114 yfbK; Ca-activated chloride channel homolog
D Clim_2292 von Willebrand factor type A K07114 yfbK; Ca-activated chloride channel homolog
D Clim_1202 large conductance mechanosensitive channel protein K03282 mscL; large conductance mechanosensitive channel
D Clim_0774 MscS Mechanosensitive ion channel K16053 ybdG; miniconductance mechanosensitive channel
D Clim_2058 magnesium transporter K06213 mgtE; magnesium transporter
D Clim_1963 MotA/TolQ/ExbB proton channel K03561 exbB; biopolymer transport protein ExbB
D Clim_1563 Biopolymer transport protein ExbD/TolR K03559 exbD; biopolymer transport protein ExbD
D Clim_0744 protein TolQ K03562 tolQ; biopolymer transport protein TolQ
D Clim_0745 protein TolR K03560 tolR; biopolymer transport protein TolR
D Clim_1725 magnesium and cobalt transport protein CorA K03284 corA; magnesium transporter
D Clim_2398 CrcB protein K06199 crcB; fluoride exporter
D Clim_2439 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family
D Clim_2043 OmpA/MotB domain protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D Clim_2385 OmpA/MotB domain protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D Clim_0032 membrane protein involved in aromatic hydrocarbon degradation K06076 fadL; long-chain fatty acid transport protein
D Clim_1064 TonB-dependent receptor K16092 btuB; vitamin B12 transporter
D Clim_1001 TonB-dependent receptor K16092 btuB; vitamin B12 transporter
D Clim_1019 TonB-dependent receptor K16092 btuB; vitamin B12 transporter
D Clim_1023 TonB-dependent receptor plug K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D Clim_2153 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Clim_0676 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Clim_1531 outer membrane efflux protein K12340 tolC; outer membrane protein
D Clim_0071 outer membrane efflux protein K12340 tolC; outer membrane protein
D Clim_2350 outer membrane efflux protein K12340 tolC; outer membrane protein
D Clim_1282 outer membrane efflux protein K12340 tolC; outer membrane protein
D Clim_1946 outer membrane efflux protein K12340 tolC; outer membrane protein
D Clim_1664 type I secretion outer membrane protein, TolC family K12543 lapE; outer membrane protein, adhesin transport system
D Clim_2274 outer membrane efflux protein K12543 lapE; outer membrane protein, adhesin transport system
D Clim_1431 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D Clim_1842 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D Clim_0330 outer membrane protein assembly complex, YaeT protein K07277 SAM50; outer membrane protein insertion porin family
D Clim_2486 putative lipoprotein K05807 bamD; outer membrane protein assembly factor BamD
D Clim_1308 Haemagluttinin domain protein K21449 ata; trimeric autotransporter adhesin
D Clim_1152 zinc/iron permease K07238 TC.ZIP; zinc transporter, ZIP family
D Clim_1088 small multidrug resistance protein K03297 emrE; small multidrug resistance pump
D Clim_1950 small multidrug resistance protein K11741 sugE; quaternary ammonium compound-resistance protein SugE
D Clim_1428 C4-dicarboxylate transporter/malic acid transport protein K03304 tehA; tellurite resistance protein
D Clim_0509 Na+/Ca+ antiporter, CaCA family K07301 yrbG; cation:H+ antiporter
D Clim_1218 Na+/Ca+ antiporter, CaCA family K07301 yrbG; cation:H+ antiporter
D Clim_1794 Na+/solute symporter K14393 actP; cation/acetate symporter
D Clim_1645 sodium/hydrogen exchanger K26735 KEA4_5_6; K+:H+ antiporter
D Clim_1681 sodium/hydrogen exchanger K26730 napA; Na+:H+ antiporter
D Clim_1698 Xanthine/uracil/vitamin C permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D Clim_1107 Chloride channel core K03281 clcA; chloride channel protein, CIC family
D Clim_1648 sulfate transporter K03321 TC.SULP; sulfate permease, SulP family
D Clim_1000 Na+/Picotransporter K03324 yjbB; phosphate:Na+ symporter
D Clim_0966 arsenite-activated ATPase ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D Clim_2143 arsenite-activated ATPase ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D Clim_0551 arsenite-activated ATPase ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D Clim_2364 arsenite-activated ATPase ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D Clim_0078 arsenite-activated ATPase ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D Clim_2147 arsenite-activated ATPase ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D Clim_2021 arsenical-resistance protein K03325 ACR3; arsenite transporter
D Clim_0977 NADH dehydrogenase (quinone) K05565 mnhA; multicomponent Na+:H+ antiporter subunit A
D Clim_0978 Na+/H+ antiporter MnhB subunit-related protein K05566 mnhB; multicomponent Na+:H+ antiporter subunit B
D Clim_0979 NADH-ubiquinone oxidoreductase chain 4L K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D Clim_0980 NADH dehydrogenase (quinone) K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D Clim_0981 cation antiporter K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D Clim_0982 multiple resistance and pH regulation protein F K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D Clim_0983 monovalent cation/proton antiporter, MnhG/PhaG subunit K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D Clim_0520 Auxin Efflux Carrier K24180 mleP; malate permease and related proteins
D Clim_2009 Auxin Efflux Carrier K24180 mleP; malate permease and related proteins
D Clim_1857 K potassium transporter K03549 kup; KUP system potassium uptake protein
D Clim_0801 protein of unknown function DUF125 transmembrane K22736 VIT; vacuolar iron transporter family protein
D Clim_2503 cell cycle protein K03588 ftsW; cell division protein FtsW
D Clim_1237 protein of unknown function UPF0016 K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D Clim_2305 MtN3 and saliva related transmembrane protein K15383 K15383; MtN3 and saliva related transmembrane protein
D Clim_1564 TonB family protein K03832 tonB; periplasmic protein TonB
D Clim_1960 TonB family protein K03832 tonB; periplasmic protein TonB
D Clim_0748 peptidoglycan-associated lipoprotein K03640 pal; peptidoglycan-associated lipoprotein
D Clim_0749 peptidoglycan-associated lipoprotein K03640 pal; peptidoglycan-associated lipoprotein
D Clim_0746 TonB family protein K03646 tolA; colicin import membrane protein
D Clim_0747 Tol-Pal system beta propeller repeat protein TolB K03641 tolB; TolB protein
D Clim_1174 Inorganic diphosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D Clim_1173 V-type H(+)-translocating pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D Clim_0809 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D Clim_0886 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D Clim_0807 sodium pump decarboxylase, gamma subunit K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma
D Clim_0889 carboxyl transferase K01604 mmdA; methylmalonyl-CoA decarboxylase subunit alpha [EC:7.2.4.3]
D Clim_0887 biotin/lipoyl attachment domain-containing protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D Clim_0888 conserved hypothetical protein K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
D Clim_2400 molybdopterin oxidoreductase K08352 phsA; thiosulfate reductase / polysulfide reductase chain A [EC:1.8.5.5]
D Clim_0383 arsenite oxidase, small subunit K08355 aoxA; arsenite oxidase small subunit [EC:1.20.2.1 1.20.9.1]
D Clim_0382 arsenite oxidase, large subunit K08356 aoxB; arsenite oxidase large subunit [EC:1.20.2.1 1.20.9.1]
D Clim_0069 secretion protein HlyD family protein K03543 emrA; membrane fusion protein, multidrug efflux system
D Clim_1658 secretion protein HlyD family protein K11003 hlyD; membrane fusion protein, hemolysin D
D Clim_2276 type I secretion membrane fusion protein, HlyD family K12542 lapC; membrane fusion protein, adhesin transport system
D Clim_1433 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Clim_2011 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Clim_1945 efflux transporter, RND family, MFP subunit K13888 macA; membrane fusion protein, macrolide-specific efflux system
D Clim_1906 capsular exopolysaccharide family K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D Clim_1844 uncharacterized protein involved in exopolysaccharide biosynthesis K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D Clim_2435 FeoA family protein K04758 feoA; ferrous iron transport protein A
D Clim_0753 FeoA family protein K04758 feoA; ferrous iron transport protein A
D Clim_0752 FeoA family protein K04758 feoA; ferrous iron transport protein A
D Clim_2434 ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D Clim_0754 ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D Clim_0755 conserved hypothetical protein K10123 feoC; putative ferrous iron transport protein C
D Clim_0562 TspO and MBR like protein K05770 TSPO; translocator protein
D Clim_1652 TspO and MBR like protein K05770 TSPO; translocator protein
C 02044 Secretion system [BR:cli02044]
D Clim_1659 cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporter K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D Clim_1658 secretion protein HlyD family protein K11003 hlyD; membrane fusion protein, hemolysin D
D Clim_1531 outer membrane efflux protein K12340 tolC; outer membrane protein
D Clim_0071 outer membrane efflux protein K12340 tolC; outer membrane protein
D Clim_2350 outer membrane efflux protein K12340 tolC; outer membrane protein
D Clim_1282 outer membrane efflux protein K12340 tolC; outer membrane protein
D Clim_1946 outer membrane efflux protein K12340 tolC; outer membrane protein
D Clim_2275 ABC transporter related K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D Clim_2276 type I secretion membrane fusion protein, HlyD family K12542 lapC; membrane fusion protein, adhesin transport system
D Clim_1664 type I secretion outer membrane protein, TolC family K12543 lapE; outer membrane protein, adhesin transport system
D Clim_2274 outer membrane efflux protein K12543 lapE; outer membrane protein, adhesin transport system
D Clim_2129 Helix-hairpin-helix DNA-binding class 1 K02237 comEA; competence protein ComEA
D Clim_0828 CMP/dCMP deaminase zinc-binding K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D Clim_1551 ComEC/Rec2-related protein K02238 comEC; competence protein ComEC
D Clim_1074 conserved hypothetical protein K07346 fimC; fimbrial chaperone protein
D Clim_1206 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Clim_0012 protein-export membrane protein SecD K12257 secDF; SecD/SecF fusion protein
D Clim_0190 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D Clim_0013 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D Clim_1629 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D Clim_2209 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D Clim_1399 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Clim_0259 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Clim_2298 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D Clim_2521 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Clim_0624 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA
D Clim_1102 Sec-independent protein translocase, TatC subunit K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:cli02042]
D Clim_2439 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family
C 02022 Two-component system [BR:cli02022]
D Clim_0773 multi-sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D Clim_0772 two component transcriptional regulator, winged helix family K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D Clim_1292 integral membrane sensor signal transduction histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D Clim_1746 Osmosensitive K channel His kinase sensor K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D Clim_0176 response regulator receiver protein K02483 K02483; two-component system, OmpR family, response regulator
D Clim_1833 sigma54 specific transcriptional regulator, Fis family K07713 zraR; two-component system, NtrC family, response regulator HydG
D Clim_1742 multi-sensor signal transduction histidine kinase K11383 kinB; two-component system, NtrC family, sensor histidine kinase KinB [EC:2.7.13.3]
D Clim_1741 two component, sigma54 specific, transcriptional regulator, Fis family K11384 algB; two-component system, NtrC family, response regulator AlgB
D Clim_1831 multi-sensor signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D Clim_1600 MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D Clim_0484 integral membrane sensor hybrid histidine kinase K10916 cqsS; two-component system, CAI-1 autoinducer sensor kinase/phosphatase CqsS [EC:2.7.13.3 3.1.3.-]
D Clim_0885 integral membrane sensor hybrid histidine kinase K10916 cqsS; two-component system, CAI-1 autoinducer sensor kinase/phosphatase CqsS [EC:2.7.13.3 3.1.3.-]
D Clim_0688 histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
C 02035 Bacterial motility proteins [BR:cli02035]
D Clim_1600 MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D Clim_1074 conserved hypothetical protein K07346 fimC; fimbrial chaperone protein
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:cli04812]
D Clim_0180 protein of unknown function DUF52 K06990 MEMO1; MEMO1 family protein
D Clim_0512 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D Clim_2238 cell shape determining protein MreB/Mrl K03569 mreB; rod shape-determining protein MreB and related proteins
D Clim_2498 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Clim_2499 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D Clim_2056 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein
D Clim_1270 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein
D Clim_2055 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:cli04147]
D Clim_0800 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG
D Clim_1927 Fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D Clim_0186 Phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Clim_1689 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Clim_2515 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D Clim_1697 alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D Clim_0479 alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D Clim_0498 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Clim_0761 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Clim_0975 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Clim_1488 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D Clim_2231 translation elongation factor Tu K02358 tuf; elongation factor Tu
D Clim_2437 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D Clim_1391 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Clim_2424 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Clim_1642 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D Clim_1416 Nucleoside-triphosphate--adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D Clim_0353 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D Clim_1251 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D Clim_1250 Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D Clim_0557 Inositol phosphatase/fructose-16-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D Clim_0140 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D Clim_0919 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Clim_0882 Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D Clim_1125 transcriptional coactivator/pterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D Clim_2447 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D Clim_0967 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Clim_1897 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Clim_1749 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D Clim_1716 Ste24 endopeptidase K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
D Clim_1379 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Clim_1494 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Clim_0327 Electron transfer flavoprotein alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit
D Clim_0179 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D Clim_2076 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D Clim_1670 Triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Clim_1938 phosphoglycerate mutase 1 family K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D Clim_0639 Lipocalin family protein K03098 APOD; apolipoprotein D and lipocalin family protein
D Clim_1238 Lipocalin family protein K03098 APOD; apolipoprotein D and lipocalin family protein
C 02048 Prokaryotic defense system [BR:cli02048]
D Clim_0445 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D Clim_0929 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D Clim_0927 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D Clim_0928 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2
D Clim_0446 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2
D Clim_0444 CRISPR-associated helicase Cas3 K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D Clim_0441 CRISPR-associated CXXC_CXXC protein Cst1 K19088 cst1; CRISPR-associated protein Cst1
D Clim_0442 CRISPR-associated autoregulator, DevR family K19075 cst2; CRISPR-associated protein Cst2
D Clim_0447 CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D Clim_0443 CRISPR-associated protein Cas5 family K19090 cas5t; CRISPR-associated protein Cas5t
D Clim_0438 CRISPR-associated protein Cas6 K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
D Clim_0930 CRISPR-associated RAMP protein, Cmr1 family K07061 cmr1; CRISPR-associated protein Cmr1
D Clim_0931 protein of unknown function DUF324 K19076 cmr2; CRISPR-associated protein Cmr2
D Clim_0933 CRISPR-associated RAMP protein, Cmr4 family K09000 cmr4; CRISPR-associated protein Cmr4
D Clim_2461 type I site-specific deoxyribonuclease, HsdR family K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D Clim_0129 type III restriction protein res subunit K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D Clim_2467 restriction modification system DNA specificity domain K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D Clim_2469 N-6 DNA methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D Clim_0128 N-6 DNA methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D Clim_0054 DNA methylase N-4/N-6 domain protein K24451 zim; modification methylase
D Clim_1468 type III restriction protein res subunit K01156 res; type III restriction enzyme [EC:3.1.21.5]
D Clim_1466 DNA methylase N-4/N-6 domain protein K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D Clim_1348 transcriptional modulator of MazE/toxin, MazF K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D Clim_1345 transcriptional modulator of MazE/toxin, MazF K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D Clim_1327 transcriptional modulator of MazE/toxin, MazF K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D Clim_1219 transcriptional regulator, AbrB family K19156 prlF; antitoxin PrlF
D Clim_1338 addiction module toxin, RelE/StbE family K06218 relE; mRNA interferase RelE/StbE
D Clim_1339 CopG domain protein DNA-binding domain protein K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
D Clim_0726 addiction module toxin, Txe/YoeB family K19158 yoeB; toxin YoeB [EC:3.1.-.-]
D Clim_0109 HipA domain protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D Clim_0210 HipA domain protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D Clim_0237 HipA domain protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D Clim_1474 HipA domain protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D Clim_2032 plasmid stabilization system K19092 parE1_3_4; toxin ParE1/3/4
D Clim_1299 plasmid stabilization system K19092 parE1_3_4; toxin ParE1/3/4
D Clim_1300 putative addiction module antidote protein, CopG/Arc/MetJ family K07746 parD1_3_4; antitoxin ParD1/3/4
D Clim_2031 putative addiction module antidote protein, CopG/Arc/MetJ family K07746 parD1_3_4; antitoxin ParD1/3/4
D Clim_2109 death-on-curing family protein K07341 doc; death on curing protein
D Clim_1368 plasmid maintenance system antidote protein, XRE family K21498 higA-1; antitoxin HigA-1
D Clim_1336 conserved hypothetical protein K13651 mqsR; motility quorum-sensing regulator / GCU-specific mRNA interferase toxin
D Clim_1337 transcriptional regulator, XRE family K13655 mqsA; HTH-type transcriptional regulator / antitoxin MqsA
D Clim_0066 PilT protein domain protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D Clim_0067 SpoVT/AbrB domain protein K18829 mvpT; antitoxin VapB
D Clim_2498 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Clim_0512 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D Clim_2238 cell shape determining protein MreB/Mrl K03569 mreB; rod shape-determining protein MreB and related proteins
D Clim_0359 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Clim_2175 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels [BR:cli04040]
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:cli01504]
D Clim_1292 integral membrane sensor signal transduction histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D Clim_1272 peptidase M15D vanX D-ala-D-ala dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D Clim_1433 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Clim_2011 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Clim_1431 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D Clim_1531 outer membrane efflux protein K12340 tolC; outer membrane protein
D Clim_0071 outer membrane efflux protein K12340 tolC; outer membrane protein
D Clim_2350 outer membrane efflux protein K12340 tolC; outer membrane protein
D Clim_1282 outer membrane efflux protein K12340 tolC; outer membrane protein
D Clim_1946 outer membrane efflux protein K12340 tolC; outer membrane protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:cli00537]
D Clim_2447 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:cli03100]
D Clim_R0005 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Clim_R0010 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Clim_R0048 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Clim_R0054 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Clim_R0045 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Clim_R0053 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Clim_R0026 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Clim_R0031 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Clim_R0013 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D Clim_R0051 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D Clim_R0035 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D Clim_R0025 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Clim_R0047 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Clim_R0043 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Clim_R0027 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Clim_R0052 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Clim_R0040 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Clim_R0024 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Clim_R0044 tRNA-His K14226 tRNA-His; tRNA His
D Clim_R0004 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Clim_R0009 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Clim_R0019 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Clim_R0029 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Clim_R0021 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Clim_R0030 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Clim_R0041 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Clim_R0042 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Clim_R0020 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Clim_R0049 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Clim_R0039 tRNA-Met K14230 tRNA-Met; tRNA Met
D Clim_R0028 tRNA-Met K14230 tRNA-Met; tRNA Met
D Clim_R0033 tRNA-Met K14230 tRNA-Met; tRNA Met
D Clim_R0022 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D Clim_R0018 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Clim_R0046 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Clim_R0032 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Clim_R0038 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Clim_R0023 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Clim_R0036 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Clim_R0037 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Clim_R0016 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Clim_R0001 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Clim_R0014 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Clim_R0017 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D Clim_R0015 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D Clim_R0050 tRNA-Val K14237 tRNA-Val; tRNA Val
D Clim_R0002 tRNA-Val K14237 tRNA-Val; tRNA Val
D Clim_R0034 tRNA-Val K14237 tRNA-Val; tRNA Val
D Clim_R0003 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Clim_R0008 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Clim_R0011 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Clim_R0006 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Clim_R0007 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Clim_R0012 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D Clim_1928 iron-containing alcohol dehydrogenase K19955 adh2; alcohol dehydrogenase [EC:1.1.1.-]
D Clim_0077 thiamine pyrophosphate protein domain protein TPP-binding K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8]
D Clim_0076 pyruvate ferredoxin/flavodoxin oxidoreductase K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8]
D Clim_2059 Electron-transferring-flavoprotein dehydrogenase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
D Clim_0005 beta-lactamase domain protein K22405 fprA1_2; NADH oxidase (H2O-forming) [EC:1.6.3.4]
D Clim_1371 peptide methionine sulfoxide reductase K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12]
D Clim_0065 methionine-R-sulfoxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D Clim_1506 Cytochrome-c peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D Clim_0776 alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D Clim_2063 alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D Clim_0833 Redoxin domain protein K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D Clim_0555 Pirin domain protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D Clim_1860 Ferritin Dps family protein K02217 ftnA; ferritin [EC:1.16.3.2]
D Clim_2001 oxidoreductase FAD/NAD(P)-binding domain protein K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D Clim_1719 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K21567 fnr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D Clim_1650 nitrogenase-associated protein K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D Clim_0381 protein tyrosine phosphatase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D Clim_2022 protein tyrosine phosphatase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D Clim_1058 anaerobic ribonucleoside-triphosphate reductase activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D Clim_0261 protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D Clim_0956 Cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D Clim_0957 Cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D Clim_1750 N-acetyltransferase K00675 nhoA; N-hydroxyarylamine O-acetyltransferase [EC:2.3.1.118]
D Clim_1703 apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D Clim_0550 leucyl/phenylalanyl-tRNA/protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D Clim_0811 Kojibiose phosphorylase K10231 kojP; kojibiose phosphorylase [EC:2.4.1.230]
D Clim_0511 glycosyl transferase group 1 K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-]
D Clim_0375 modD protein K03813 modD; molybdenum transport protein [EC:2.4.2.-]
D Clim_2480 deoxyhypusine synthase K00809 DHPS; deoxyhypusine synthase [EC:2.5.1.46]
D Clim_1233 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D Clim_0976 ApbE family lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D Clim_2171 phosphatidate cytidylyltransferase K18678 VTE5; phytol kinase [EC:2.7.1.182]
D Clim_0613 HPr kinase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D Clim_2449 alpha/beta hydrolase fold K03928 yvaK; carboxylesterase [EC:3.1.1.1]
D Clim_0505 thioesterase superfamily protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D Clim_0143 thioesterase superfamily protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D Clim_1736 PHP domain protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D Clim_0133 PHP domain protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D Clim_2415 putative phosphohistidine phosphatase, SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D Clim_2453 protein of unknown function DUF89 K09116 K09116; damage-control phosphatase, subfamily I [EC:3.1.3.-]
D Clim_1799 hydrolase, TatD family K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D Clim_1380 nuclease (SNase domain protein) K01174 nuc; micrococcal nuclease [EC:3.1.31.1]
D Clim_1679 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D Clim_0902 LmbE family protein K01463 bshB1; N-acetylglucosamine malate deacetylase 1 [EC:3.5.1.-]
D Clim_1423 LmbE family protein K22135 bshB2; N-acetylglucosamine malate deacetylase 2 [EC:3.5.1.-]
D Clim_2295 ATPase associated with various cellular activities AAA_3 K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D Clim_0408 protein of unknown function DUF62 K22205 E3.13.2.3; S-adenosyl-L-methionine hydrolase (adenosine-forming) [EC:3.13.2.3]
D Clim_1204 carbohydrate kinase, YjeF related protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D Clim_2113 peptidylprolyl isomerase FKBP-type K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8]
D Clim_1688 UDP-N-acetylmuramate K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D Clim_0870 acetyl-CoA carboxylase alpha subunit-like protein K04104 accD3; acyl-CoA carboxylase subunit beta [EC:6.4.1.-]
D Clim_0987 electron transport complex, RnfABCDGE type, D subunit K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D Clim_0988 electron transport complex, RnfABCDGE type, C subunit K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D Clim_0989 electron transport complex, RnfABCDGE type, B subunit K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D Clim_1813 heavy metal translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D Clim_1604 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
C 99981 Carbohydrate metabolism
D Clim_0400 conserved hypothetical protein K22136 bshC; bacillithiol synthase
C 99982 Energy metabolism
D Clim_0986 electron transport complex, RnfABCDGE type, G subunit K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D Clim_0985 electron transport complex, RnfABCDGE type, E subunit K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D Clim_0984 electron transport complex, RnfABCDGE type, A subunit K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D Clim_2174 nitrogen-fixing NifU domain protein K04488 iscU; nitrogen fixation protein NifU and related proteins
D Clim_0678 nitrogenase cofactor biosynthesis protein NifB K02585 nifB; nitrogen fixation protein NifB
D Clim_0679 Nitrogenase K02592 nifN; nitrogenase molybdenum-iron protein NifN
D Clim_0680 nitrogenase MoFe cofactor biosynthesis protein NifE K02587 nifE; nitrogenase molybdenum-cofactor synthesis protein NifE
D Clim_0757 flavodoxin K03839 fldA; flavodoxin I
D Clim_0326 Electron transfer flavoprotein alpha/beta-subunit K03521 fixA; electron transfer flavoprotein beta subunit
D Clim_0693 sulfur relay protein, TusE/DsrC/DsvC family K23077 dsrC; dissimilatory sulfite reductase related protein
D Clim_0033 protein of unknown function DUF1458 K09165 K09165; dodecin
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D Clim_1802 alanine racemase domain protein K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D Clim_0634 conserved hypothetical protein K07027 K07027; glycosyltransferase 2 family protein
C 99987 Cofactor metabolism
C 99988 Secondary metabolism
D Clim_0579 esterase, putative K03932 lpqC; polyhydroxybutyrate depolymerase
D Clim_2257 Poly(3-hydroxybutyrate) depolymerase-like protein K03932 lpqC; polyhydroxybutyrate depolymerase
C 99999 Others
D Clim_0830 DoxX family protein K15977 K15977; putative oxidoreductase
D Clim_2061 phospholipase/Carboxylesterase K06999 K06999; phospholipase/carboxylesterase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D Clim_1819 cold-shock DNA-binding domain protein K03704 cspA; cold shock protein
D Clim_0684 nitrogen regulatory protein P-II K02589 nifHD1; nitrogen regulatory protein PII 1
D Clim_0683 nitrogen regulatory protein P-II K02590 nifHD2; nitrogen regulatory protein PII 2
D Clim_0972 nitrogen regulatory protein P-II K04752 glnK; nitrogen regulatory protein P-II 2
C 99974 Translation
D Clim_1830 beta-lactamase domain protein K07576 K07576; metallo-beta-lactamase family protein
C 99975 Protein processing
D Clim_0508 protein of unknown function DUF306 Meta and HslJ K03668 hslJ; heat shock protein HslJ
D Clim_0026 ATP-dependent Clp protease adaptor protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D Clim_2137 trigger factor K03545 tig; trigger factor
D Clim_0529 SsrA-binding protein K03664 smpB; SsrA-binding protein
D Clim_1784 hydrogenase assembly chaperone hypC/hupF K04653 hypC; hydrogenase expression/formation protein HypC
D Clim_1783 hydrogenase expression/formation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD
D Clim_1782 hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE
D Clim_1785 (NiFe) hydrogenase maturation protein HypF K04656 hypF; hydrogenase maturation protein HypF
D Clim_0605 Mg chelatase, subunit ChlI K07391 comM; magnesium chelatase family protein
D Clim_0861 OsmC family protein K07397 yhfA; putative redox protein
D Clim_0864 protein of unknown function DUF107 K07403 nfeD; membrane-bound serine protease (ClpP class)
C 99976 Replication and repair
D Clim_1818 DNA repair protein RadC K03630 radC; DNA repair protein RadC
D Clim_1370 protein of unknown function DUF195 K09760 rmuC; DNA recombination protein RmuC
D Clim_0016 protein of unknown function UPF0102 K07460 yraN; putative endonuclease
D Clim_0314 DNA protecting protein DprA K04096 smf; DNA processing protein
D Clim_0836 AAA ATPase central domain protein K07478 ycaJ; putative ATPase
D Clim_2267 conserved hypothetical protein K07501 K07501; 3'-5' exonuclease
D Clim_0222 transposase IS4 family protein K07481 K07481; transposase, IS5 family
D Clim_0583 transposase IS3/IS911 family protein K07483 K07483; transposase
D Clim_1759 transposase IS3/IS911 family protein K07483 K07483; transposase
D Clim_1903 transposase IS3/IS911 family protein K07483 K07483; transposase
D Clim_1894 transposase IS3/IS911 family protein K07483 K07483; transposase
D Clim_1295 transposase IS3/IS911 family protein K07483 K07483; transposase
D Clim_1305 transposase IS3/IS911 family protein K07483 K07483; transposase
D Clim_2105 transposase IS3/IS911 family protein K07483 K07483; transposase
D Clim_0939 transposase IS3/IS911 family protein K07483 K07483; transposase
D Clim_0722 protein of unknown function DUF1568 K07491 rayT; REP-associated tyrosine transposase
D Clim_1929 protein of unknown function DUF1568 K07491 rayT; REP-associated tyrosine transposase
D Clim_1256 protein of unknown function DUF1568 K07491 rayT; REP-associated tyrosine transposase
D Clim_1356 protein of unknown function DUF1568 K07491 rayT; REP-associated tyrosine transposase
D Clim_2454 protein of unknown function DUF1568 K07491 rayT; REP-associated tyrosine transposase
D Clim_0925 protein of unknown function DUF1568 K07491 rayT; REP-associated tyrosine transposase
D Clim_0940 Integrase catalytic region K07497 K07497; putative transposase
D Clim_1294 Integrase catalytic region K07497 K07497; putative transposase
D Clim_1760 Integrase catalytic region K07497 K07497; putative transposase
D Clim_1895 Integrase catalytic region K07497 K07497; putative transposase
D Clim_1902 Integrase catalytic region K07497 K07497; putative transposase
D Clim_1890 Integrase catalytic region K07497 K07497; putative transposase
D Clim_1304 Integrase catalytic region K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D Clim_0875 conserved hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D Clim_1603 amino acid permease-associated region K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D Clim_1432 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D Clim_1613 acriflavin resistance protein K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D Clim_2358 Na+/solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D Clim_0961 Na+/solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D Clim_0792 amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
C 99978 Cell growth
D Clim_0522 Peptidase M23 K22719 envC; murein hydrolase activator
C 99993 Cell motility
C 99995 Signaling proteins
D Clim_0896 GTP-binding protein TypA K06207 typA; GTP-binding protein
D Clim_1166 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D Clim_1266 putative CBS domain and cyclic nucleotide-regulated nucleotidyltransferase K07182 K07182; CBS domain-containing protein
C 99992 Structural proteins
D Clim_0312 outer membrane chaperone Skp (OmpH) K06142 hlpA; outer membrane protein
D Clim_1532 efflux transporter, RND family, MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein
D Clim_1419 efflux transporter, RND family, MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein
D Clim_2178 helix-turn-helix domain protein K15539 rodZ; cytoskeleton protein RodZ
C 99994 Others
D Clim_1616 phosphate uptake regulator, PhoU K02039 phoU; phosphate transport system protein
D Clim_0380 phosphate uptake regulator, PhoU K02039 phoU; phosphate transport system protein
D Clim_0633 CutA1 divalent ion tolerance protein K03926 cutA; periplasmic divalent cation tolerance protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D Clim_1911 hypothetical protein K06138 pqqD; pyrroloquinoline quinone biosynthesis protein D
D Clim_2084 Patatin K07001 K07001; NTE family protein
D Clim_0402 surface antigen (D15) K07001 K07001; NTE family protein
D Clim_1521 ribonuclease BN K07058 K07058; membrane protein
D Clim_0413 LemA family protein K03744 lemA; LemA protein
D Clim_0526 SNARE associated Golgi protein K03975 dedA; membrane-associated protein
D Clim_0244 SNARE associated Golgi protein K03975 dedA; membrane-associated protein
D Clim_1110 membrane protein of unknown function K08972 K08972; putative membrane protein
D Clim_0415 protein of unknown function DUF477 K08988 K08988; putative membrane protein
D Clim_1227 protein of unknown function DUF477 K08988 K08988; putative membrane protein
D Clim_2239 alkylphosphonate utilization operon protein PhnA K06193 phnA; protein PhnA
C 99997 Function unknown
D Clim_1017 Radical SAM domain protein K06871 K06871; uncharacterized protein
D Clim_0414 protein of unknown function DUF477 K06872 K06872; uncharacterized protein
D Clim_1228 protein of unknown function DUF477 K06872 K06872; uncharacterized protein
D Clim_1372 protein of unknown function DUF255 K06888 K06888; uncharacterized protein
D Clim_1427 protein of unknown function DUF134 K06933 K06933; uncharacterized protein
D Clim_1146 protein of unknown function DUF134 K06933 K06933; uncharacterized protein
D Clim_2019 protein of unknown function UPF0153 K06940 K06940; uncharacterized protein
D Clim_2512 conserved hypothetical protein K06962 K06962; uncharacterized protein
D Clim_0863 peptidase membrane zinc metallopeptidase putative K06973 K06973; uncharacterized protein
D Clim_0595 Glyoxalase/bleomycin resistance protein/dioxygenase K06996 K06996; uncharacterized protein
D Clim_0802 conserved hypothetical protein K07028 K07028; uncharacterized protein
D Clim_0047 hypothetical protein K07034 K07034; uncharacterized protein
D Clim_1273 yecA family protein K07039 K07039; uncharacterized protein
D Clim_0950 yecA family protein K07039 K07039; uncharacterized protein
D Clim_1722 protein of unknown function zinc metallopeptidase putative K07054 K07054; uncharacterized protein
D Clim_0091 domain of unknown function DUF1731 K07071 K07071; uncharacterized protein
D Clim_0132 permease K07089 K07089; uncharacterized protein
D Clim_2023 permease K07089 K07089; uncharacterized protein
D Clim_0357 conserved hypothetical protein K07090 K07090; uncharacterized protein
D Clim_0036 protein of unknown function DUF81 K07090 K07090; uncharacterized protein
D Clim_0397 transcriptional regulator, Fis family K07108 K07108; uncharacterized protein
D Clim_1424 nuclear protein SET K07117 K07117; uncharacterized protein
D Clim_0189 short-chain dehydrogenase/reductase SDR K07124 K07124; uncharacterized protein
D Clim_1310 Sel1 domain protein repeat-containing protein K07126 K07126; uncharacterized protein
D Clim_0593 conserved hypothetical protein K07133 K07133; uncharacterized protein
D Clim_0926 conserved hypothetical protein K07133 K07133; uncharacterized protein
D Clim_0220 conserved hypothetical protein K07133 K07133; uncharacterized protein
D Clim_1764 ATPase (AAA+ superfamily)-like protein K07133 K07133; uncharacterized protein
D Clim_0218 conserved hypothetical protein K07133 K07133; uncharacterized protein
D Clim_1555 protein of unknown function DUF164 K07164 K07164; uncharacterized protein
D Clim_2522 protein of unknown function DUF37 K08998 K08998; uncharacterized protein
D Clim_0328 protein of unknown function DUF151 K08999 K08999; uncharacterized protein
D Clim_1822 conserved hypothetical protein K09117 K09117; uncharacterized protein
D Clim_2040 protein of unknown function DUF167 K09131 K09131; uncharacterized protein
D Clim_2397 protein of unknown function DUF190 K09137 K09137; uncharacterized protein
D Clim_1954 protein of unknown function DUF985 K09705 K09705; uncharacterized protein
D Clim_1815 conserved hypothetical protein K09792 K09792; uncharacterized protein
D Clim_1560 protein of unknown function DUF456 K09793 K09793; uncharacterized protein
D Clim_2080 protein of unknown function DUF541 K09797 K09797; uncharacterized protein
D Clim_2072 protein of unknown function DUF541 K09807 K09807; uncharacterized protein
D Clim_0660 protein of unknown function DUF486 K09922 K09922; uncharacterized protein
D Clim_0914 glycosyl transferase family 2 K09931 K09931; uncharacterized protein
D Clim_1568 conserved hypothetical protein K09939 K09939; uncharacterized protein
D Clim_1085 conserved hypothetical protein K09978 K09978; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 31, 2024