+D GENES KO
#
KEGG Orthology (KO) - Parabacteroides sp. CT06
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:parc00010]
D CI960_09965 hexokinase K00844 HK; hexokinase [EC:2.7.1.1]
D CI960_01060 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CI960_06515 hypothetical protein K25026 glk; glucokinase [EC:2.7.1.2]
D CI960_20625 sugar kinase K25026 glk; glucokinase [EC:2.7.1.2]
D CI960_14415 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D CI960_05545 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D CI960_03845 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CI960_00605 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CI960_01845 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CI960_20400 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D CI960_11845 diphosphate--fructose-6-phosphate 1-phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90]
D CI960_01510 fructose-bisphosphatase class III K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D CI960_00625 fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D CI960_11645 fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D CI960_14825 fba; fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CI960_19710 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CI960_04855 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CI960_07310 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D CI960_00620 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D CI960_06920 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D CI960_19355 histidine phosphatase family protein K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D CI960_19500 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D CI960_04715 cofactor-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D CI960_17955 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CI960_23065 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CI960_22505 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CI960_08875 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D CI960_07400 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CI960_21445 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CI960_05425 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D CI960_11155 3-methyl-2-oxobutanoate dehydrogenase subunit VorB K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D CI960_20265 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D CI960_11160 2-oxoglutarate oxidoreductase K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D CI960_20260 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D CI960_17460 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CI960_01890 galactose-1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D CI960_06320 galactose-1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D CI960_06425 HAD family phosphatase K20866 yihX; glucose-1-phosphatase [EC:3.1.3.10]
D CI960_16915 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CI960_20255 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
C 00020 Citrate cycle (TCA cycle) [PATH:parc00020]
D CI960_09095 citrate/2-methylcitrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D CI960_09085 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D CI960_09090 isocitrate dehydrogenase (NADP(+)) K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D CI960_07390 diapophytoene dehydrogenase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D CI960_07400 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CI960_21445 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CI960_11155 3-methyl-2-oxobutanoate dehydrogenase subunit VorB K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D CI960_20265 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D CI960_11160 2-oxoglutarate oxidoreductase K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D CI960_20260 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D CI960_11165 2-oxoglutarate ferredoxin oxidoreductase subunit gamma K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D CI960_11150 ferredoxin K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D CI960_22290 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D CI960_22285 succinate dehydrogenase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D CI960_22295 succinate dehydrogenase/fumarate reductase cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CI960_20060 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D CI960_12835 fumarate hydratase K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D CI960_12840 fumarate hydratase K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D CI960_06395 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D CI960_07505 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CI960_13095 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CI960_19645 oxaloacetate decarboxylase K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]
D CI960_20255 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D CI960_05425 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
C 00030 Pentose phosphate pathway [PATH:parc00030]
D CI960_03845 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CI960_07185 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D CI960_07190 pgl; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D CI960_07180 phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D CI960_06155 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D CI960_06300 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CI960_21165 fsa; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D CI960_17025 rpiA; ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D CI960_06295 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D CI960_21085 deoC; 2-deoxyribose-5-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D CI960_06360 rbsK; ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D CI960_16915 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CI960_02345 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D CI960_22185 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D CI960_19525 gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17]
D CI960_22190 sugar kinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D CI960_00625 fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D CI960_11645 fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D CI960_14825 fba; fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CI960_01510 fructose-bisphosphatase class III K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D CI960_00605 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CI960_01845 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CI960_20400 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D CI960_11845 diphosphate--fructose-6-phosphate 1-phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:parc00040]
D CI960_22180 uronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12]
D CI960_13155 uxuA; mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8]
D CI960_13540 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CI960_02615 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CI960_11525 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CI960_08200 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CI960_04815 sugar phosphate isomerase/epimerase K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D CI960_14620 sugar phosphate isomerase/epimerase K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D CI960_06155 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D CI960_07830 carbohydrate kinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D CI960_07835 xylA; xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D CI960_10785 rhamnulokinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
D CI960_10770 rhamnulose-1-phosphate aldolase K01629 rhaD; rhamnulose-1-phosphate aldolase [EC:4.1.2.19]
D CI960_07075 hypothetical protein K09988 lyxA; D-lyxose ketol-isomerase [EC:5.3.1.15]
C 00051 Fructose and mannose metabolism [PATH:parc00051]
D CI960_03410 beta-mannosidase K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78]
D CI960_22965 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D CI960_11660 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D CI960_20740 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D CI960_05675 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D CI960_06175 glmM; phosphoglucosamine mutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D CI960_22525 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D CI960_06820 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D CI960_06805 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D CI960_07210 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D CI960_06810 GDP-fucose synthetase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D CI960_07205 GDP-fucose synthetase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D CI960_10780 L-rhamnose isomerase K01813 rhaA; L-rhamnose isomerase [EC:5.3.1.14]
D CI960_10785 rhamnulokinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
D CI960_10770 rhamnulose-1-phosphate aldolase K01629 rhaD; rhamnulose-1-phosphate aldolase [EC:4.1.2.19]
D CI960_09965 hexokinase K00844 HK; hexokinase [EC:2.7.1.1]
D CI960_00605 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CI960_01845 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CI960_20400 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D CI960_11845 diphosphate--fructose-6-phosphate 1-phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90]
D CI960_01510 fructose-bisphosphatase class III K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D CI960_07835 xylA; xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D CI960_00625 fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D CI960_11645 fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D CI960_14825 fba; fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CI960_19710 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CI960_22960 2,6-beta-D-fructofuranosidase K03332 fruA; fructan beta-fructosidase [EC:3.2.1.80]
D CI960_06295 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
C 00052 Galactose metabolism [PATH:parc00052]
D CI960_01890 galactose-1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D CI960_06320 galactose-1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D CI960_06310 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D CI960_06775 epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CI960_12455 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CI960_16915 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CI960_09965 hexokinase K00844 HK; hexokinase [EC:2.7.1.1]
D CI960_01060 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CI960_06515 hypothetical protein K25026 glk; glucokinase [EC:2.7.1.2]
D CI960_20625 sugar kinase K25026 glk; glucokinase [EC:2.7.1.2]
D CI960_14415 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D CI960_05545 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D CI960_04560 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D CI960_14985 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D CI960_08630 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D CI960_21710 glycoside hydrolase family 2 K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D CI960_05000 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D CI960_03555 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D CI960_12805 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D CI960_00605 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CI960_01845 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CI960_20400 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D CI960_20635 glycoside hydrolase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D CI960_12325 Retaining alpha-galactosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D CI960_00820 glycoside hydrolase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D CI960_08345 alpha-glucosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
C 00053 Ascorbate and aldarate metabolism [PATH:parc00053]
D CI960_13540 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CI960_02615 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CI960_11525 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CI960_08200 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CI960_19525 gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17]
D CI960_13535 NAD-dependent epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D CI960_04815 sugar phosphate isomerase/epimerase K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D CI960_14620 sugar phosphate isomerase/epimerase K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
C 00500 Starch and sucrose metabolism [PATH:parc00500]
D CI960_20635 glycoside hydrolase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D CI960_12325 Retaining alpha-galactosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D CI960_00820 glycoside hydrolase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D CI960_09755 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D CI960_18370 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D CI960_21525 beta-glucosidase BglX K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D CI960_21530 beta-glucosidase BglX K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D CI960_21715 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D CI960_13190 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D CI960_11245 rfbF; glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D CI960_04185 glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D CI960_04170 glycosyltransferase family 1 protein K16150 K16150; glycogen synthase [EC:2.4.1.11]
D CI960_05670 1,4-alpha-glucan-branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D CI960_00595 DUF3417 domain-containing protein K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D CI960_15645 alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D CI960_07305 pulA; type I pullulanase K01200 pulA; pullulanase [EC:3.2.1.41]
D CI960_08350 alpha-amylase K01176 AMY; alpha-amylase [EC:3.2.1.1]
D CI960_04175 alpha-amylase K07405 E3.2.1.1A; alpha-amylase [EC:3.2.1.1]
D CI960_08345 alpha-glucosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
D CI960_03120 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D CI960_02805 bifunctional alpha,alpha-trehalose-phosphate synthase (UDP-forming)/trehalose-phosphatase K16055 TPS; trehalose 6-phosphate synthase/phosphatase [EC:2.4.1.15 3.1.3.12]
D CI960_02800 glycoside hydrolase K22934 E3.2.1.28; alpha,alpha-trehalase [EC:3.2.1.28]
D CI960_16915 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CI960_09965 hexokinase K00844 HK; hexokinase [EC:2.7.1.1]
D CI960_01060 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CI960_06515 hypothetical protein K25026 glk; glucokinase [EC:2.7.1.2]
D CI960_20625 sugar kinase K25026 glk; glucokinase [EC:2.7.1.2]
D CI960_14415 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D CI960_05545 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D CI960_03845 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CI960_22965 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D CI960_11660 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D CI960_20740 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:parc00520]
D CI960_18855 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D CI960_10525 beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D CI960_07280 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D CI960_03350 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D CI960_04590 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D CI960_04595 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D CI960_22015 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D CI960_04600 glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D CI960_00955 glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D CI960_09965 hexokinase K00844 HK; hexokinase [EC:2.7.1.1]
D CI960_22965 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D CI960_11660 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D CI960_20740 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D CI960_03510 murQ; N-acetylmuramic acid 6-phosphate etherase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D CI960_02495 nucleotidyltransferase family protein K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99]
D CI960_12620 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CI960_09455 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CI960_20945 N-acylglucosamine 2-epimerase K01787 RENBP; N-acylglucosamine 2-epimerase [EC:5.1.3.8]
D CI960_14420 N-acetylmannosamine-6-phosphate 2-epimerase K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9]
D CI960_20940 N-acetylneuraminate lyase K01639 E4.1.3.3; N-acetylneuraminate lyase [EC:4.1.3.3]
D CI960_06755 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D CI960_10930 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D CI960_03315 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D CI960_12160 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D CI960_03225 UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D CI960_12165 UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D CI960_20185 gfo/Idh/MocA family oxidoreductase K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335]
D CI960_20190 DegT/DnrJ/EryC1/StrS family aminotransferase K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
D CI960_17320 N-acetyltransferase K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201]
D CI960_03230 LPS biosynthesis protein WbpP K02473 wbpP; UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine 4-epimerase [EC:5.1.3.7 5.1.3.-]
D CI960_10710 nucleotide sugar dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D CI960_03235 nucleotide sugar dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D CI960_13490 UDP-glucose 4-epimerase K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D CI960_11595 pseB; UDP-N-acetylglucosamine 4,6-dehydratase (inverting) K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D CI960_11575 CMP-sialic acid synthetase K15897 pseG; UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase [EC:3.6.1.57]
D CI960_11570 pseI; pseudaminic acid synthase K15898 pseI; pseudaminic acid synthase [EC:2.5.1.97]
D CI960_11580 pseF; pseudaminic acid cytidylyltransferase K15899 pseF; pseudaminic acid cytidylyltransferase [EC:2.7.7.81]
D CI960_12095 alpha-N-arabinofuranosidase K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55]
D CI960_10535 glycoside hydrolase K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55]
D CI960_14795 alpha-L-arabinofuranosidase K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55]
D CI960_08970 NAD-dependent epimerase/dehydratase family protein K08678 UXS1; UDP-glucuronate decarboxylase [EC:4.1.1.35]
D CI960_21515 xylosidase K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37]
D CI960_17285 beta-xylosidase K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37]
D CI960_01060 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CI960_06515 hypothetical protein K25026 glk; glucokinase [EC:2.7.1.2]
D CI960_20625 sugar kinase K25026 glk; glucokinase [EC:2.7.1.2]
D CI960_14415 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D CI960_05545 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D CI960_16915 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CI960_13540 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CI960_02615 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CI960_11525 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CI960_08200 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CI960_06310 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D CI960_06775 epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CI960_12455 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CI960_05000 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D CI960_13535 NAD-dependent epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D CI960_03845 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CI960_05675 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D CI960_06175 glmM; phosphoglucosamine mutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D CI960_22525 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D CI960_06820 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D CI960_06805 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D CI960_07210 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D CI960_06810 GDP-fucose synthetase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D CI960_07205 GDP-fucose synthetase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D CI960_12140 fkp; bifunctional fucokinase/L-fucose-1-P-guanylyltransferase K25314 FKGP; fucokinase / fucose-1-phosphate guanylyltransferase [EC:2.7.1.52 2.7.7.30]
D CI960_11245 rfbF; glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D CI960_11240 rfbG; CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45]
C 00620 Pyruvate metabolism [PATH:parc00620]
D CI960_17460 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CI960_05425 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D CI960_11155 3-methyl-2-oxobutanoate dehydrogenase subunit VorB K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D CI960_20265 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D CI960_11160 2-oxoglutarate oxidoreductase K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D CI960_20260 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D CI960_07400 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CI960_21445 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CI960_23050 pflB; formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D CI960_22945 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D CI960_22940 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CI960_22505 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CI960_00165 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CI960_03490 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CI960_08650 pyruvate oxidase K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1]
D CI960_09005 2-hydroxyacid dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
D CI960_00200 FAD-binding oxidoreductase K18930 dld; D-lactate dehydrogenase
D CI960_16860 aldehyde dehydrogenase K07248 aldA; lactaldehyde dehydrogenase / glycolaldehyde dehydrogenase [EC:1.2.1.22 1.2.1.21]
D CI960_01055 lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D CI960_12670 MBL fold hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D CI960_21010 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D CI960_05630 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D CI960_06290 carboxylase K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D CI960_19650 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D CI960_03915 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D CI960_19640 oxaloacetate decarboxylase K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma
D CI960_19645 oxaloacetate decarboxylase K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]
D CI960_07505 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CI960_13095 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CI960_20060 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D CI960_12835 fumarate hydratase K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D CI960_12840 fumarate hydratase K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D CI960_06395 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D CI960_20255 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D CI960_08875 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D CI960_16755 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:parc00630]
D CI960_17460 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CI960_07505 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CI960_13095 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CI960_09095 citrate/2-methylcitrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D CI960_09085 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D CI960_03935 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D CI960_00175 methylmalonyl-CoA carboxyltransferase K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D CI960_03485 methylmalonyl-CoA carboxyltransferase K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D CI960_17690 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D CI960_17695 mutA; methylmalonyl-CoA mutase small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D CI960_05590 catalase K03781 katE; catalase [EC:1.11.1.6]
D CI960_19315 HAD family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D CI960_02675 haloacid dehalogenase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D CI960_05100 glutamine synthetase type III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CI960_02035 glutamine synthetase type III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CI960_02780 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CI960_10520 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CI960_12675 gcvP; glycine dehydrogenase (aminomethyl-transferring) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D CI960_05055 gcvT; glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D CI960_07400 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CI960_21445 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CI960_22115 gcvH; glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
D CI960_06440 hydroxypyruvate isomerase K01816 hyi; hydroxypyruvate isomerase [EC:5.3.1.22]
D CI960_21835 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D CI960_16860 aldehyde dehydrogenase K07248 aldA; lactaldehyde dehydrogenase / glycolaldehyde dehydrogenase [EC:1.2.1.22 1.2.1.21]
D CI960_22185 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
C 00640 Propanoate metabolism [PATH:parc00640]
D CI960_17460 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CI960_22945 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D CI960_22940 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CI960_07385 2-oxoisovalerate dehydrogenase K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D CI960_07400 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CI960_21445 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CI960_23050 pflB; formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D CI960_00165 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CI960_03490 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CI960_00175 methylmalonyl-CoA carboxyltransferase K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D CI960_03485 methylmalonyl-CoA carboxyltransferase K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D CI960_03935 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D CI960_17690 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D CI960_17695 mutA; methylmalonyl-CoA mutase small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D CI960_00585 methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
D CI960_16735 methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
D CI960_06865 NADH-dependent alcohol dehydrogenase K08325 yqhD; NADP-dependent alcohol dehydrogenase [EC:1.1.-.-]
D CI960_07435 NADH-dependent alcohol dehydrogenase K08325 yqhD; NADP-dependent alcohol dehydrogenase [EC:1.1.-.-]
C 00650 Butanoate metabolism [PATH:parc00650]
D CI960_19650 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D CI960_03915 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D CI960_03920 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D CI960_22290 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D CI960_22285 succinate dehydrogenase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D CI960_22295 succinate dehydrogenase/fumarate reductase cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CI960_08020 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D CI960_23050 pflB; formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D CI960_05425 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D CI960_11155 3-methyl-2-oxobutanoate dehydrogenase subunit VorB K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D CI960_20265 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D CI960_11160 2-oxoglutarate oxidoreductase K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D CI960_20260 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D CI960_17235 alcohol dehydrogenase K18369 adh2; alcohol dehydrogenase [EC:1.1.1.-]
D CI960_16785 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CI960_16780 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:parc00660]
D CI960_16785 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CI960_16780 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CI960_16740 2-isopropylmalate synthase K09011 cimA; (R)-citramalate synthase [EC:2.3.3.21]
D CI960_16750 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D CI960_16745 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D CI960_16730 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:parc00562]
D CI960_19555 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D CI960_09485 gfo/Idh/MocA family oxidoreductase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D CI960_19945 sugar phosphate isomerase/epimerase K06606 iolI; 2-keto-myo-inositol isomerase [EC:5.3.99.11]
D CI960_05065 gfo/Idh/MocA family oxidoreductase K22230 iolU; scyllo-inositol 2-dehydrogenase (NADP+) [EC:1.1.1.-]
D CI960_02445 sugar phosphate isomerase/epimerase K03335 iolE; inosose dehydratase [EC:4.2.1.44]
D CI960_19710 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:parc00190]
D CI960_03370 NAD(P)/FAD-dependent oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D CI960_22290 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D CI960_22285 succinate dehydrogenase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D CI960_22295 succinate dehydrogenase/fumarate reductase cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CI960_19455 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D CI960_19460 cytochrome C oxidase assembly protein K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D CI960_04735 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D CI960_04770 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D CI960_04730 atpG; ATP synthase F1 subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D CI960_04740 atpH; ATP synthase F1 subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D CI960_04765 atpC; ATP synthase F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D CI960_04755 atpB; ATP synthase F0 subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D CI960_04745 atpF; ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D CI960_04750 atpE; ATP synthase F0 subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D CI960_08050 ATP synthase subunit A K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1]
D CI960_08055 V-type ATP synthase subunit B K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B
D CI960_08060 V-type ATP synthase subunit D K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D
D CI960_08040 hypothetical protein K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E
D CI960_08065 ATPase K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I
D CI960_08070 ATPase K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K
D CI960_17345 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:parc00680]
D CI960_10520 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CI960_17955 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CI960_23065 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CI960_07505 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CI960_13095 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CI960_00625 fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D CI960_11645 fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D CI960_14825 fba; fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CI960_01510 fructose-bisphosphatase class III K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D CI960_00605 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CI960_01845 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CI960_20400 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D CI960_22945 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D CI960_22940 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CI960_17460 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CI960_00620 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D CI960_06920 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D CI960_19355 histidine phosphatase family protein K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D CI960_19500 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D CI960_04715 cofactor-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D CI960_12475 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CI960_12480 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D CI960_09250 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:parc00910]
D CI960_07325 ammonia-forming cytochrome c nitrite reductase K03385 nrfA; nitrite reductase (cytochrome c-552) [EC:1.7.2.2]
D CI960_03655 ammonia-forming cytochrome c nitrite reductase K03385 nrfA; nitrite reductase (cytochrome c-552) [EC:1.7.2.2]
D CI960_03650 nrfH; cytochrome c nitrite reductase small subunit K15876 nrfH; cytochrome c nitrite reductase small subunit
D CI960_05695 hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1]
D CI960_19170 nitronate monooxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D CI960_02480 NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D CI960_02505 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D CI960_05100 glutamine synthetase type III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CI960_02035 glutamine synthetase type III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CI960_02780 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CI960_05130 glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D CI960_05125 glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D CI960_01565 gltA; glutamate synthase (NADPH), homotetrameric K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D CI960_05445 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:parc00920]
D CI960_07900 sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D CI960_07895 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D CI960_07890 cysC; adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D CI960_07880 cysQ; 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D CI960_06165 bifunctional oligoribonuclease/PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D CI960_00205 NAD(P)/FAD-dependent oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D CI960_19435 DoxX family membrane protein K16937 doxD; thiosulfate dehydrogenase (quinone) large subunit [EC:1.8.5.2]
D CI960_06750 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D CI960_03300 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D CI960_21655 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D CI960_08925 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D CI960_08565 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D CI960_11695 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:parc00061]
D CI960_00165 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CI960_03490 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CI960_20380 acyl carrier protein K02078 acpP; acyl carrier protein
D CI960_05485 fabD; [acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D CI960_18430 3-oxoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CI960_01220 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CI960_01295 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CI960_01320 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CI960_11730 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CI960_20385 fabF; beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CI960_01305 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CI960_11725 fabG; beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CI960_04065 NAD(P)-dependent oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CI960_16960 bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/3-hydroxyacyl-ACP dehydratase K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59]
D CI960_23010 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D CI960_06640 nitronate monooxygenase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D CI960_07015 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CI960_20005 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CI960_03355 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CI960_12365 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CI960_01310 o-succinylbenzoate--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation
D CI960_07015 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CI960_20005 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CI960_03355 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CI960_12365 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CI960_01310 o-succinylbenzoate--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis [PATH:parc00121]
D CI960_12015 linear amide C-N hydrolase K01442 cbh; choloylglycine hydrolase [EC:3.5.1.24]
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:parc00561]
D CI960_21835 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D CI960_07095 glycerol kinase K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121]
D CI960_07100 DAK2 domain-containing protein K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121]
D CI960_13340 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D CI960_17850 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CI960_14875 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D CI960_03555 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D CI960_12805 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00564 Glycerophospholipid metabolism [PATH:parc00564]
D CI960_03850 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D CI960_13345 glycerol-3-phosphate dehydrogenase/oxidase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D CI960_17850 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CI960_11255 glycerol-3-phosphate cytidylyltransferase K00980 tagD; glycerol-3-phosphate cytidylyltransferase [EC:2.7.7.39]
D CI960_14875 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D CI960_03480 phospholipase K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D CI960_02775 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D CI960_13030 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D CI960_04060 glycerol-3-phosphate cytidylyltransferase K00968 PCYT1; choline-phosphate cytidylyltransferase [EC:2.7.7.15]
D CI960_14370 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D CI960_19045 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D CI960_19050 phosphatidylserine decarboxylase proenzyme K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D CI960_18750 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism [PATH:parc00565]
D CI960_03480 phospholipase K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00600 Sphingolipid metabolism [PATH:parc00600]
D CI960_05355 glucosylceramidase K01201 GBA; glucosylceramidase [EC:3.2.1.45]
D CI960_02385 beta-glycosidase K01201 GBA; glucosylceramidase [EC:3.2.1.45]
D CI960_04560 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D CI960_14985 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D CI960_08630 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D CI960_21710 glycoside hydrolase family 2 K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D CI960_19260 arylsulfatase K01130 E3.1.6.1; arylsulfatase [EC:3.1.6.1]
D CI960_16820 arylsulfatase K01134 ARSA; arylsulfatase A [EC:3.1.6.8]
D CI960_17800 arylsulfatase K01134 ARSA; arylsulfatase A [EC:3.1.6.8]
D CI960_20965 sialidase K01186 NEU1; sialidase-1 [EC:3.2.1.18]
D CI960_03555 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D CI960_12805 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D CI960_18855 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D CI960_10525 beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D CI960_07280 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D CI960_03350 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
C 00590 Arachidonic acid metabolism
D CI960_03480 phospholipase K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00591 Linoleic acid metabolism
D CI960_03480 phospholipase K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00592 alpha-Linolenic acid metabolism [PATH:parc00592]
D CI960_03480 phospholipase K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:parc00230]
D CI960_16915 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CI960_02345 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D CI960_05045 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D CI960_06830 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D CI960_21670 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D CI960_20375 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D CI960_01005 phosphoribosylglycinamide formyltransferase 2 K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21]
D CI960_18875 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D CI960_16940 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D CI960_22120 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D CI960_15040 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D CI960_01765 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D CI960_14525 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CI960_11405 2',3'-cyclic-nucleotide 2'-phosphodiesterase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D CI960_19385 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D CI960_09140 purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D CI960_14580 laccase domain-containing protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D CI960_14595 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D CI960_18175 IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D CI960_03560 inosine 5-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D CI960_12150 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D CI960_21225 non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D CI960_11755 xpt; xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D CI960_13400 glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D CI960_13405 GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D CI960_09355 guaD; guanine deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3]
D CI960_03895 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D CI960_03115 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CI960_00125 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D CI960_22985 dehydrogenase K01129 dgt; dGTPase [EC:3.1.5.1]
D CI960_16695 RelA/SpoT family protein K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D CI960_18945 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D CI960_01925 CYTH domain-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D CI960_02370 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D CI960_09295 AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4]
D CI960_21065 ade; adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2]
D CI960_13235 bifunctional metallophosphatase/5'-nucleotidase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D CI960_14590 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D CI960_07890 cysC; adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D CI960_07900 sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D CI960_07895 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
C 00240 Pyrimidine metabolism [PATH:parc00240]
D CI960_00230 carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CI960_06840 carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CI960_06835 carbamoyl-phosphate synthase (glutamine-hydrolyzing) small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D CI960_08240 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D CI960_08235 aspartate carbamoyltransferase regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D CI960_10675 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D CI960_09275 dihydroorotate dehydrogenase K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D CI960_09280 dihydroorotate dehydrogenase electron transfer subunit K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D CI960_12285 diguanylate cyclase K00226 pyrD; dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1]
D CI960_01610 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D CI960_16950 pyrF; orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D CI960_22950 UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D CI960_12150 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D CI960_03960 maf; maf-like protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D CI960_12410 CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D CI960_01835 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D CI960_07990 uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D CI960_22030 AAA family ATPase K00876 udk; uridine kinase [EC:2.7.1.48]
D CI960_11405 2',3'-cyclic-nucleotide 2'-phosphodiesterase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D CI960_19385 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D CI960_17020 phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3]
D CI960_09470 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D CI960_13235 bifunctional metallophosphatase/5'-nucleotidase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D CI960_16920 cdd; cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D CI960_00125 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D CI960_03115 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CI960_04155 CMP deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D CI960_22130 dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D CI960_07485 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D CI960_01885 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D CI960_09565 NAD-dependent dihydropyrimidine dehydrogenase subunit PreA K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:parc00250]
D CI960_00505 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CI960_16560 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CI960_21340 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D CI960_05775 L-asparaginase 1 K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D CI960_05510 isoaspartyl peptidase/L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D CI960_01725 asparagine synthetase A K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D CI960_05120 asnB; asparagine synthase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D CI960_15110 amidohydrolase K13566 NIT2; omega-amidase [EC:3.5.1.3]
D CI960_09080 aspartate 4-decarboxylase K09758 asdA; aspartate 4-decarboxylase [EC:4.1.1.12]
D CI960_20270 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D CI960_12590 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D CI960_06905 aspA; aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D CI960_03455 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CI960_01600 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CI960_02370 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D CI960_01765 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D CI960_08240 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D CI960_08235 aspartate carbamoyltransferase regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D CI960_08020 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D CI960_05130 glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D CI960_05125 glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D CI960_01565 gltA; glutamate synthase (NADPH), homotetrameric K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D CI960_02480 NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D CI960_02505 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D CI960_17440 pruA; 1-pyrroline-5-carboxylate dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]
D CI960_05100 glutamine synthetase type III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CI960_02035 glutamine synthetase type III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CI960_02780 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CI960_00230 carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CI960_06840 carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CI960_06835 carbamoyl-phosphate synthase (glutamine-hydrolyzing) small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D CI960_08015 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D CI960_05045 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D CI960_06830 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:parc00260]
D CI960_02860 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CI960_16535 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CI960_04720 bifunctional aspartate kinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D CI960_22380 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CI960_04710 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D CI960_11770 low specificity L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D CI960_10520 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CI960_21835 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D CI960_00620 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D CI960_06920 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D CI960_19355 histidine phosphatase family protein K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D CI960_19500 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D CI960_04715 cofactor-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D CI960_12475 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CI960_12480 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D CI960_09250 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D CI960_09900 kbl; glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D CI960_20990 2-amino-3-ketobutyrate CoA ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D CI960_12675 gcvP; glycine dehydrogenase (aminomethyl-transferring) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D CI960_05055 gcvT; glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D CI960_07400 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CI960_21445 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CI960_22115 gcvH; glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
D CI960_19045 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D CI960_10890 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D CI960_15000 threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D CI960_06870 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D CI960_06900 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D CI960_22365 TrpB-like pyridoxal phosphate-dependent enzyme K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:parc00270]
D CI960_06750 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D CI960_03300 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D CI960_21655 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D CI960_08925 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D CI960_08565 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D CI960_16825 pyridoxal phosphate-dependent aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CI960_08625 pyridoxal phosphate-dependent aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CI960_12965 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D CI960_18225 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D CI960_14580 laccase domain-containing protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D CI960_09135 chlorohydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D CI960_17585 mtnA; S-methyl-5-thioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D CI960_09645 diguanylate cyclase K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D CI960_10420 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D CI960_21175 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D CI960_20110 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D CI960_02860 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CI960_16535 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CI960_04720 bifunctional aspartate kinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D CI960_22380 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CI960_11695 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D CI960_18955 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D CI960_02020 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D CI960_05415 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CI960_00505 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CI960_16560 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CI960_09080 aspartate 4-decarboxylase K09758 asdA; aspartate 4-decarboxylase [EC:4.1.1.12]
D CI960_07505 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CI960_13095 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CI960_10890 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D CI960_12475 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CI960_12480 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:parc00280]
D CI960_05415 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CI960_07385 2-oxoisovalerate dehydrogenase K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D CI960_07400 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CI960_21445 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CI960_00175 methylmalonyl-CoA carboxyltransferase K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D CI960_03485 methylmalonyl-CoA carboxyltransferase K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D CI960_03935 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D CI960_17690 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D CI960_17695 mutA; methylmalonyl-CoA mutase small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:parc00290]
D CI960_15000 threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D CI960_16740 2-isopropylmalate synthase K09011 cimA; (R)-citramalate synthase [EC:2.3.3.21]
D CI960_16750 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D CI960_16745 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D CI960_16730 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D CI960_16785 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CI960_16780 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CI960_16770 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D CI960_16790 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D CI960_03975 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D CI960_05415 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CI960_16755 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:parc00300]
D CI960_02860 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CI960_16535 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CI960_04720 bifunctional aspartate kinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D CI960_22380 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CI960_07925 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CI960_20490 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D CI960_03445 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D CI960_05110 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D CI960_05105 LL-diaminopimelate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D CI960_11080 aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D CI960_16540 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D CI960_00940 diaminopimelate dehydrogenase K03340 dapdh; diaminopimelate dehydrogenase [EC:1.4.1.16]
D CI960_09980 PLP-dependent aminotransferase family protein K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D CI960_18705 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CI960_22925 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D CI960_23015 bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10]
C 00310 Lysine degradation [PATH:parc00310]
D CI960_07390 diapophytoene dehydrogenase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D CI960_07400 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CI960_21445 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CI960_06970 KamA family protein K01843 kamA; lysine 2,3-aminomutase [EC:5.4.3.2]
C 00220 Arginine biosynthesis [PATH:parc00220]
D CI960_03455 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CI960_01600 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CI960_05500 arginase K01476 rocF; arginase [EC:3.5.3.1]
D CI960_19580 rocF; arginase K01476 rocF; arginase [EC:3.5.3.1]
D CI960_08015 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D CI960_05100 glutamine synthetase type III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CI960_02035 glutamine synthetase type III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CI960_02780 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CI960_00230 carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CI960_06840 carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CI960_06835 carbamoyl-phosphate synthase (glutamine-hydrolyzing) small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D CI960_02480 NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D CI960_02505 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D CI960_00505 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CI960_16560 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CI960_12565 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D CI960_03450 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D CI960_03445 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D CI960_21690 acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:parc00330]
D CI960_09725 arginine decarboxylase K02626 pdaD; arginine decarboxylase [EC:4.1.1.19]
D CI960_09595 agmatine deiminase family protein K10536 aguA; agmatine deiminase [EC:3.5.3.12]
D CI960_09590 acyltransferase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53]
D CI960_08395 nspC; carboxynorspermidine decarboxylase K13747 nspC; carboxynorspermidine decarboxylase [EC:4.1.1.96]
D CI960_11375 N-acetyltransferase K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57]
D CI960_05500 arginase K01476 rocF; arginase [EC:3.5.3.1]
D CI960_19580 rocF; arginase K01476 rocF; arginase [EC:3.5.3.1]
D CI960_19585 rocD; ornithine--oxo-acid transaminase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D CI960_17430 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D CI960_17435 proline dehydrogenase K00318 PRODH; proline dehydrogenase [EC:1.5.5.2]
D CI960_17440 pruA; 1-pyrroline-5-carboxylate dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]
D CI960_17465 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D CI960_17470 gamma-glutamyl-phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D CI960_07850 glycyl radical enzyme K23121 pflD; trans-4-hydroxy-L-proline dehydratase [EC:4.2.1.172]
D CI960_00505 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CI960_16560 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:parc00340]
D CI960_08545 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D CI960_16525 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D CI960_16515 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D CI960_16510 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D CI960_16520 imidazole glycerol phosphate synthase cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D CI960_08560 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB K01089 hisB; imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15]
D CI960_08555 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CI960_09905 histidinol-phosphatase K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15]
D CI960_08550 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D CI960_01385 hutH; histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D CI960_01365 urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D CI960_01375 imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D CI960_01370 ftcD; glutamate formimidoyltransferase K00603 fctD; glutamate formiminotransferase / 5-formyltetrahydrofolate cyclo-ligase [EC:2.1.2.5 6.3.3.2]
C 00350 Tyrosine metabolism [PATH:parc00350]
D CI960_00505 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CI960_16560 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CI960_08555 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00360 Phenylalanine metabolism [PATH:parc00360]
D CI960_09685 phenylacetate--CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D CI960_20440 PaaI family thioesterase K02614 paaI; acyl-CoA thioesterase [EC:3.1.2.-]
D CI960_00505 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CI960_16560 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CI960_08555 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00380 Tryptophan metabolism [PATH:parc00380]
D CI960_07390 diapophytoene dehydrogenase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D CI960_07400 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CI960_21445 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CI960_05590 catalase K03781 katE; catalase [EC:1.11.1.6]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:parc00400]
D CI960_18915 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D CI960_22500 aroQ; type II 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D CI960_20275 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D CI960_21985 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D CI960_16835 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D CI960_06895 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D CI960_06890 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D CI960_06885 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D CI960_06880 indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D CI960_06870 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D CI960_06900 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D CI960_22365 TrpB-like pyridoxal phosphate-dependent enzyme K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D CI960_11085 3-deoxy-7-phosphoheptulonate synthase K04516 AROA1; chorismate mutase [EC:5.4.99.5]
D CI960_11090 prephenate dehydrogenase/arogenate dehydrogenase family protein K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D CI960_11075 prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D CI960_00505 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CI960_16560 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CI960_08555 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:parc00410]
D CI960_04195 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D CI960_08020 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D CI960_04190 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D CI960_09565 NAD-dependent dihydropyrimidine dehydrogenase subunit PreA K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
C 00430 Taurine and hypotaurine metabolism [PATH:parc00430]
D CI960_08020 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D CI960_20270 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D CI960_12590 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D CI960_22940 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CI960_22945 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism [PATH:parc00440]
D CI960_12855 aepY; phosphonopyruvate decarboxylase K09459 E4.1.1.82; phosphonopyruvate decarboxylase [EC:4.1.1.82]
D CI960_20515 phosphonoacetaldehyde hydrolase K05306 phnX; phosphonoacetaldehyde hydrolase [EC:3.11.1.1]
D CI960_20510 phnW; 2-aminoethylphosphonate--pyruvate transaminase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]
D CI960_04060 glycerol-3-phosphate cytidylyltransferase K00968 PCYT1; choline-phosphate cytidylyltransferase [EC:2.7.7.15]
D CI960_09450 MBL fold metallo-hydrolase K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]
C 00450 Selenocompound metabolism [PATH:parc00450]
D CI960_16825 pyridoxal phosphate-dependent aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CI960_08625 pyridoxal phosphate-dependent aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CI960_12965 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D CI960_00830 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D CI960_13035 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D CI960_07900 sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D CI960_07895 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D CI960_20195 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:parc00460]
D CI960_09755 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D CI960_18370 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D CI960_21525 beta-glucosidase BglX K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D CI960_21530 beta-glucosidase BglX K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D CI960_21715 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D CI960_13190 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D CI960_05775 L-asparaginase 1 K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D CI960_05510 isoaspartyl peptidase/L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D CI960_01725 asparagine synthetase A K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D CI960_10520 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:parc00470]
D CI960_23015 bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10]
D CI960_19595 D-alanine--D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CI960_08015 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D CI960_01665 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D CI960_18695 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D CI960_05110 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D CI960_16540 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:parc00480]
D CI960_08530 aminopeptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D CI960_19110 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D CI960_16890 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D CI960_09090 isocitrate dehydrogenase (NADP(+)) K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D CI960_07180 phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D CI960_07185 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:parc00511]
D CI960_20965 sialidase K01186 NEU1; sialidase-1 [EC:3.2.1.18]
D CI960_04560 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D CI960_14985 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D CI960_08630 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D CI960_21710 glycoside hydrolase family 2 K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D CI960_18855 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D CI960_10525 beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D CI960_07280 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D CI960_03350 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D CI960_04630 glycoside hydrolase K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D CI960_01950 alpha-mannosidase K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D CI960_01995 alpha-mannosidase K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D CI960_21900 hypothetical protein K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D CI960_19935 glycoside hydrolase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D CI960_18345 glycoside hydrolase K15923 AXY8; alpha-L-fucosidase 2 [EC:3.2.1.51]
D CI960_05355 glucosylceramidase K01201 GBA; glucosylceramidase [EC:3.2.1.45]
D CI960_02385 beta-glycosidase K01201 GBA; glucosylceramidase [EC:3.2.1.45]
C 00540 Lipopolysaccharide biosynthesis [PATH:parc00540]
D CI960_16965 acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D CI960_16960 bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/3-hydroxyacyl-ACP dehydratase K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59]
D CI960_16955 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D CI960_19155 UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D CI960_19390 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D CI960_02970 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D CI960_20735 SIS domain-containing protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D CI960_04845 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D CI960_03955 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D CI960_19365 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D CI960_12390 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D CI960_17625 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D CI960_03335 acetyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D CI960_06790 SIS domain-containing protein K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D CI960_06785 GHMP kinase K07031 hddA; D-glycero-alpha-D-manno-heptose-7-phosphate kinase [EC:2.7.1.168]
D CI960_13510 O-antigen ligase domain-containing protein K02847 waaL; O-antigen ligase [EC:2.4.99.26]
C 00542 O-Antigen repeat unit biosynthesis [PATH:parc00542]
D CI960_04940 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D CI960_06695 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D CI960_11300 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D CI960_03185 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:parc00541]
D CI960_06775 epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CI960_12455 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CI960_05000 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D CI960_13540 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CI960_02615 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CI960_11525 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CI960_08200 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CI960_13535 NAD-dependent epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D CI960_07200 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CI960_13430 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D CI960_13425 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D CI960_11230 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D CI960_18805 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D CI960_11245 rfbF; glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D CI960_11240 rfbG; CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45]
D CI960_05675 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D CI960_06175 glmM; phosphoglucosamine mutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D CI960_22525 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D CI960_06820 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D CI960_06805 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D CI960_07210 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D CI960_06810 GDP-fucose synthetase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D CI960_07205 GDP-fucose synthetase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D CI960_06755 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D CI960_10930 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D CI960_03315 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D CI960_12160 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D CI960_03225 UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D CI960_12165 UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D CI960_13490 UDP-glucose 4-epimerase K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D CI960_11595 pseB; UDP-N-acetylglucosamine 4,6-dehydratase (inverting) K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D CI960_13475 capsular biosynthesis protein K19068 wbjC; UDP-2-acetamido-2,6-beta-L-arabino-hexul-4-ose reductase [EC:1.1.1.367]
D CI960_13470 UDP-N-acetyl glucosamine 2-epimerase K24258 wbjD; UDP-N-acetyl-L-fucosamine synthase [EC:5.1.3.28]
D CI960_11575 CMP-sialic acid synthetase K15897 pseG; UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase [EC:3.6.1.57]
D CI960_11570 pseI; pseudaminic acid synthase K15898 pseI; pseudaminic acid synthase [EC:2.5.1.97]
D CI960_11580 pseF; pseudaminic acid cytidylyltransferase K15899 pseF; pseudaminic acid cytidylyltransferase [EC:2.7.7.81]
D CI960_10710 nucleotide sugar dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D CI960_03235 nucleotide sugar dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D CI960_20185 gfo/Idh/MocA family oxidoreductase K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335]
D CI960_20190 DegT/DnrJ/EryC1/StrS family aminotransferase K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
D CI960_17320 N-acetyltransferase K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201]
D CI960_03230 LPS biosynthesis protein WbpP K02473 wbpP; UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine 4-epimerase [EC:5.1.3.7 5.1.3.-]
C 00550 Peptidoglycan biosynthesis [PATH:parc00550]
D CI960_12620 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CI960_09455 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CI960_18680 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D CI960_18695 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D CI960_18705 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CI960_19595 D-alanine--D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CI960_22925 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D CI960_23015 bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10]
D CI960_01645 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CI960_18250 undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CI960_08470 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CI960_18700 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CI960_18685 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D CI960_12360 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D CI960_13350 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CI960_08355 pbpC; penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D CI960_14505 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D CI960_18710 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D CI960_22800 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
C 00552 Teichoic acid biosynthesis [PATH:parc00552]
D CI960_18250 undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CI960_08470 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CI960_04940 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D CI960_06695 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D CI960_11300 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D CI960_03185 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D CI960_11250 lipopolysaccharide cholinephosphotransferase K07271 licD; lipopolysaccharide cholinephosphotransferase [EC:2.7.8.-]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:parc00543]
D CI960_04940 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D CI960_06695 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D CI960_11300 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D CI960_03185 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D CI960_03310 glycosyltransferase K02852 wecG; UDP-N-acetyl-D-mannosaminouronate:lipid I N-acetyl-D-mannosaminouronosyltransferase [EC:2.4.1.180]
D CI960_11675 membrane-bound O-acyltransferase family protein K19294 algI; alginate O-acetyltransferase complex protein AlgI
D CI960_08505 MBOAT family protein K19294 algI; alginate O-acetyltransferase complex protein AlgI
D CI960_06750 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D CI960_03300 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D CI960_21655 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D CI960_08925 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:parc00730]
D CI960_09015 phosphomethylpyrimidine synthase ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D CI960_09030 thiD; bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D CI960_19540 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D CI960_06610 thiazole biosynthesis protein K22699 thi4; sulfide-dependent adenosine diphosphate thiazole synthase [EC:2.4.2.59]
D CI960_09020 thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D CI960_09025 thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D CI960_02965 thiL; thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D CI960_22980 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D CI960_08245 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D CI960_22160 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D CI960_00760 thiamine diphosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D CI960_14590 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:parc00740]
D CI960_00510 riboflavin biosynthesis protein RibBA K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D CI960_01630 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D CI960_12465 HAD family phosphatase K21063 K21063; 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.104]
D CI960_04125 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D CI960_05265 riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D CI960_21695 ribF; riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
C 00750 Vitamin B6 metabolism [PATH:parc00750]
D CI960_16905 pdxH; pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D CI960_05690 pyridoxal kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D CI960_20370 erythronate-4-phosphate dehydrogenase K03473 pdxB; erythronate-4-phosphate dehydrogenase [EC:1.1.1.290]
D CI960_12480 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D CI960_11990 pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D CI960_04710 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:parc00760]
D CI960_21340 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D CI960_21245 quinolinate synthase NadA K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D CI960_16855 nadC; nicotinate-nucleotide diphosphorylase (carboxylating) K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D CI960_09140 purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D CI960_11405 2',3'-cyclic-nucleotide 2'-phosphodiesterase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D CI960_19385 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D CI960_03885 nicotinate-nicotinamide nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D CI960_00430 NAD(+) diphosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D CI960_05085 NAD(+) synthase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D CI960_12335 CinA family protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D CI960_19785 NAD-dependent deacylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D CI960_11980 NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
C 00770 Pantothenate and CoA biosynthesis [PATH:parc00770]
D CI960_16785 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CI960_16780 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CI960_16770 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D CI960_16790 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D CI960_03975 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D CI960_07980 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D CI960_05685 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D CI960_04190 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D CI960_17685 type II pantothenate kinase K09680 PANK1_2_3; type II pantothenate kinase [EC:2.7.1.33]
D CI960_04015 type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D CI960_07440 coaBC; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D CI960_22750 pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D CI960_14405 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D CI960_15055 siderophore biosynthesis protein K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D CI960_05415 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CI960_09565 NAD-dependent dihydropyrimidine dehydrogenase subunit PreA K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
D CI960_04195 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:parc00780]
D CI960_14690 bioC; malonyl-[acyl-carrier protein] O-methyltransferase BioC K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D CI960_20385 fabF; beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CI960_01305 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CI960_11725 fabG; beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CI960_04065 NAD(P)-dependent oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CI960_23010 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D CI960_14685 DUF452 domain-containing protein K09789 bioG; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85]
D CI960_14485 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D CI960_14680 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D CI960_14675 adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D CI960_14695 ATP-dependent dethiobiotin synthetase BioD K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D CI960_14670 bioB; biotin synthase BioB K01012 bioB; biotin synthase [EC:2.8.1.6]
D CI960_19015 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:parc00785]
D CI960_12355 octanoyltransferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D CI960_17360 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D CI960_07395 lipoate--protein ligase family protein K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D CI960_07400 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CI960_21445 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CI960_07390 diapophytoene dehydrogenase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D CI960_07385 2-oxoisovalerate dehydrogenase K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D CI960_12675 gcvP; glycine dehydrogenase (aminomethyl-transferring) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D CI960_05055 gcvT; glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D CI960_22115 gcvH; glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:parc00790]
D CI960_19700 folE; GTP cyclohydrolase I FolE K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D CI960_08245 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D CI960_22160 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D CI960_03130 folB; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D CI960_11505 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D CI960_18235 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D CI960_22930 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D CI960_01880 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D CI960_07545 bifunctional folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D CI960_00510 riboflavin biosynthesis protein RibBA K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D CI960_09585 aminodeoxychorismate synthase component I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D CI960_09580 4-amino-4-deoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D CI960_10665 6-carboxytetrahydropterin synthase QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D CI960_10670 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D CI960_02715 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D CI960_02720 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
C 00670 One carbon pool by folate [PATH:parc00670]
D CI960_01880 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D CI960_08775 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D CI960_04505 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D CI960_01380 methenyltetrahydrofolate cyclohydrolase K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9]
D CI960_10520 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CI960_20375 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D CI960_14525 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CI960_01370 ftcD; glutamate formimidoyltransferase K00603 fctD; glutamate formiminotransferase / 5-formyltetrahydrofolate cyclo-ligase [EC:2.1.2.5 6.3.3.2]
D CI960_05580 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D CI960_05055 gcvT; glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D CI960_12965 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D CI960_01885 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D CI960_05405 metF; methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D CI960_04145 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:parc00860]
D CI960_17630 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CI960_21455 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D CI960_01960 uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D CI960_01970 methylcobamide--CoM methyltransferase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D CI960_22280 radical SAM protein K22226 ahbC; Fe-coproporphyrin III synthase
D CI960_00140 heme-binding protein K02190 cbiK; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D CI960_09070 sirohydrochlorin cobaltochelatase K02190 cbiK; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D CI960_00135 cobalt chelatase K02190 cbiK; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D CI960_08785 precorrin-2 C(20)-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151]
D CI960_09040 cbiD; cobalamin biosynthesis protein CbiD K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195]
D CI960_09050 bifunctional cobalt-precorrin-7 (C(5))-methyltransferase/cobalt-precorrin-6B (C(15))-methyltransferase K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196]
D CI960_07985 cobyrinate a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D CI960_22635 ATP:cob(I)alamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D CI960_09910 ATP--cob(I)alamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D CI960_10995 cobyric acid synthase CobQ K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D CI960_03050 cobD; cobalamin biosynthesis protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D CI960_03040 adenosylcobinamide kinase/adenosylcobinamide phosphate guanyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D CI960_03030 adenosylcobinamide-GDP ribazoletransferase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D CI960_03035 cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D CI960_03025 cobC; alpha-ribazole phosphatase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D CI960_17880 L-threonine-O-3-phosphate decarboxylase K04720 cobD; threonine-phosphate decarboxylase [EC:4.1.1.81]
D CI960_11005 ferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:parc00130]
D CI960_15045 bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D CI960_09390 isochorismate synthase K02361 entC; isochorismate synthase [EC:5.4.4.2]
D CI960_04965 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D CI960_09395 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D CI960_02590 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D CI960_09410 O-succinylbenzoic acid--CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D CI960_09400 1,4-dihydroxy-2-naphthoyl-CoA synthase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D CI960_12030 1,4-dihydroxy-2-naphthoate polyprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:parc00900]
D CI960_19540 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D CI960_12605 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D CI960_19735 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D CI960_07525 4-diphosphocytidyl-2C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D CI960_19070 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D CI960_22125 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D CI960_01840 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D CI960_01820 polyprenyl synthetase family protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D CI960_21090 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D CI960_01645 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D CI960_06300 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis [PATH:parc00253]
D CI960_14115 tetracycline-inactivating monooxygenase Tet(X) K18221 tetX; tetracycline 11a-monooxygenase, tetracycline resistance protein [EC:1.14.13.231]
C 00523 Polyketide sugar unit biosynthesis [PATH:parc00523]
D CI960_07200 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CI960_13430 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D CI960_13425 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D CI960_11230 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D CI960_18805 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D CI960_09390 isochorismate synthase K02361 entC; isochorismate synthase [EC:5.4.4.2]
C 01055 Biosynthesis of vancomycin group antibiotics
D CI960_13430 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:parc00946]
D CI960_09755 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D CI960_18370 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D CI960_21525 beta-glucosidase BglX K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D CI960_21530 beta-glucosidase BglX K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D CI960_21715 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D CI960_13190 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D CI960_06400 glycoside hydrolase K05989 ramA; alpha-L-rhamnosidase [EC:3.2.1.40]
D CI960_10760 glycoside hydrolase K05989 ramA; alpha-L-rhamnosidase [EC:3.2.1.40]
D CI960_21950 alpha-rhamnosidase K05989 ramA; alpha-L-rhamnosidase [EC:3.2.1.40]
D CI960_18300 glycoside hydrolase K05989 ramA; alpha-L-rhamnosidase [EC:3.2.1.40]
D CI960_10755 glycoside hydrolase K05989 ramA; alpha-L-rhamnosidase [EC:3.2.1.40]
D CI960_10765 alpha-L-rhamnosidase K05989 ramA; alpha-L-rhamnosidase [EC:3.2.1.40]
D CI960_13240 glycoside hydrolase K05989 ramA; alpha-L-rhamnosidase [EC:3.2.1.40]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D CI960_15790 CfxA family class A broad-spectrum beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
C 00332 Carbapenem biosynthesis [PATH:parc00332]
D CI960_17465 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D CI960_17470 gamma-glutamyl-phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:parc00261]
D CI960_07900 sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D CI960_07895 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D CI960_02860 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CI960_16535 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CI960_04720 bifunctional aspartate kinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D CI960_22380 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CI960_07925 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CI960_20490 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:parc00521]
D CI960_09965 hexokinase K00844 HK; hexokinase [EC:2.7.1.1]
D CI960_01060 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CI960_06515 hypothetical protein K25026 glk; glucokinase [EC:2.7.1.2]
D CI960_20625 sugar kinase K25026 glk; glucokinase [EC:2.7.1.2]
D CI960_14415 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D CI960_05545 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D CI960_16915 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CI960_19555 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D CI960_09485 gfo/Idh/MocA family oxidoreductase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D CI960_07200 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CI960_13430 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D CI960_13425 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D CI960_11230 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D CI960_18805 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis [PATH:parc00524]
D CI960_09965 hexokinase K00844 HK; hexokinase [EC:2.7.1.1]
D CI960_01060 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CI960_06515 hypothetical protein K25026 glk; glucokinase [EC:2.7.1.2]
D CI960_20625 sugar kinase K25026 glk; glucokinase [EC:2.7.1.2]
D CI960_14415 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D CI960_05545 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:parc00525]
D CI960_07200 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CI960_13430 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:parc00401]
D CI960_11090 prephenate dehydrogenase/arogenate dehydrogenase family protein K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D CI960_00505 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CI960_16560 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CI960_08555 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D CI960_06895 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D CI960_06890 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D CI960_05485 fabD; [acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D CI960_01305 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CI960_11725 fabG; beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CI960_04065 NAD(P)-dependent oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CI960_23010 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics [PATH:parc00998]
D CI960_20380 acyl carrier protein K02078 acpP; acyl carrier protein
D CI960_12855 aepY; phosphonopyruvate decarboxylase K09459 E4.1.1.82; phosphonopyruvate decarboxylase [EC:4.1.1.82]
C 00999 Biosynthesis of various plant secondary metabolites [PATH:parc00999]
D CI960_18225 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D CI960_09755 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D CI960_18370 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D CI960_21525 beta-glucosidase BglX K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D CI960_21530 beta-glucosidase BglX K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D CI960_21715 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D CI960_13190 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:parc00362]
D CI960_07510 carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D CI960_19650 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D CI960_03915 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D CI960_03920 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
C 00627 Aminobenzoate degradation
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
D CI960_13320 nickel-dependent hydrogenase large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D CI960_13315 [Ni/Fe] hydrogenase small subunit K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
D CI960_19525 gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:parc03020]
D CI960_17505 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CI960_17500 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CI960_17970 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:parc03010]
D CI960_19305 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D CI960_00495 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D CI960_18075 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D CI960_17975 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D CI960_18020 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D CI960_03085 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D CI960_18120 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D CI960_18035 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D CI960_00490 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D CI960_18110 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D CI960_17980 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D CI960_18125 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D CI960_17985 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D CI960_18040 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D CI960_20085 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D CI960_05750 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D CI960_18060 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D CI960_03090 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D CI960_18085 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D CI960_00875 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D CI960_17580 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D CI960_17520 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D CI960_18090 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D CI960_18105 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D CI960_18100 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D CI960_18045 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D CI960_18030 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D CI960_17510 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D CI960_03095 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D CI960_17515 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D CI960_17525 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D CI960_00485 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D CI960_18055 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D CI960_18010 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D CI960_18070 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D CI960_17965 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D CI960_18025 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D CI960_17900 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D CI960_07265 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D CI960_05035 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D CI960_18080 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D CI960_18095 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D CI960_18050 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D CI960_05165 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D CI960_05040 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D CI960_07410 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D CI960_18065 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D CI960_18015 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D CI960_14830 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31
D CI960_18435 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D CI960_07415 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D CI960_19610 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D CI960_07260 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D CI960_17990 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D CI960_03000 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CI960_20560 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CI960_03770 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CI960_05325 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CI960_18470 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CI960_19925 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CI960_13220 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CI960_18455 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CI960_20545 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CI960_05340 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CI960_03015 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CI960_03785 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CI960_13205 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CI960_19910 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CI960_03020 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CI960_03790 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CI960_05345 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CI960_13200 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CI960_18450 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CI960_19905 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CI960_20540 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:parc00970]
D CI960_02465 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CI960_05335 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CI960_13210 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CI960_20550 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CI960_03010 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CI960_03780 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CI960_18460 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CI960_19915 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CI960_01730 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CI960_07335 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CI960_07340 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CI960_12765 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CI960_07330 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CI960_00900 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CI960_01410 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D CI960_01420 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D CI960_01415 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D CI960_11360 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CI960_16500 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CI960_16505 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CI960_13415 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D CI960_13420 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D CI960_21480 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D CI960_14350 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D CI960_14355 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D CI960_00880 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CI960_17700 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CI960_00870 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CI960_01580 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CI960_04115 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CI960_09145 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CI960_01590 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CI960_12570 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CI960_17555 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CI960_04510 tRNA-His K14226 tRNA-His; tRNA His
D CI960_04515 tRNA-His K14226 tRNA-His; tRNA His
D CI960_05330 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CI960_13215 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CI960_20555 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CI960_03005 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CI960_18465 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CI960_19920 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CI960_03775 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CI960_02400 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CI960_09150 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CI960_22530 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CI960_09155 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CI960_01585 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CI960_22215 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CI960_05790 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CI960_22810 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CI960_05785 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CI960_10505 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CI960_00525 tRNA-Met K14230 tRNA-Met; tRNA Met
D CI960_11740 tRNA-Met K14230 tRNA-Met; tRNA Met
D CI960_19995 tRNA-Met K14230 tRNA-Met; tRNA Met
D CI960_05280 tRNA-Met K14230 tRNA-Met; tRNA Met
D CI960_02685 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D CI960_02955 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D CI960_18910 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CI960_05230 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CI960_02680 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CI960_01810 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CI960_05735 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CI960_05795 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CI960_11635 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CI960_13270 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CI960_05730 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CI960_02460 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CI960_09735 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CI960_04000 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CI960_17550 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CI960_17565 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CI960_17540 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D CI960_02665 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D CI960_04120 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D CI960_17560 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D CI960_09740 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D CI960_01750 tRNA-Val K14237 tRNA-Val; tRNA Val
D CI960_01760 tRNA-Val K14237 tRNA-Val; tRNA Val
D CI960_01755 tRNA-Val K14237 tRNA-Val; tRNA Val
D CI960_17630 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CI960_11130 glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D CI960_18920 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CI960_11210 aspartate--tRNA(Asp/Asn) ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CI960_01775 asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D CI960_22250 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D CI960_07250 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CI960_12305 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CI960_20435 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CI960_20195 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CI960_05580 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D CI960_02435 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CI960_21215 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CI960_12800 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CI960_03855 lysS; DUF4332 domain-containing protein K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CI960_01120 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CI960_08660 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CI960_02380 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CI960_08215 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CI960_09885 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CI960_21475 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CI960_00310 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:parc03060]
D CI960_18005 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D CI960_17535 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D CI960_04095 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D CI960_01155 protein translocase subunit SecDF K12257 secDF; SecD/SecF fusion protein
D CI960_14395 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D CI960_12405 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CI960_12585 secA; protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CI960_04500 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CI960_08410 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D CI960_05490 twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D CI960_05495 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D CI960_20495 S26 family signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CI960_20500 lepB; S26 family signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CI960_12790 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system
C 03050 Proteasome
C 03018 RNA degradation [PATH:parc03018]
D CI960_17955 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CI960_23065 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CI960_20035 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D CI960_09520 ATP-dependent helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D CI960_11185 ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D CI960_22730 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D CI960_20765 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CI960_09525 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D CI960_18180 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D CI960_05555 RecQ family ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D CI960_11190 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D CI960_14555 rny; ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D CI960_00605 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CI960_01845 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CI960_15090 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D CI960_17140 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D CI960_02395 groL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CI960_17345 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D CI960_16700 tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:parc03030]
D CI960_19830 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CI960_07430 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CI960_07970 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CI960_00470 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CI960_16865 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CI960_05400 DNA polymerase III subunit delta K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CI960_09290 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CI960_07425 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CI960_07300 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D CI960_10610 DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D CI960_14325 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D CI960_10615 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D CI960_13755 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CI960_14280 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CI960_15070 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CI960_16405 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CI960_20300 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D CI960_00840 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D CI960_21095 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CI960_07750 hypothetical protein K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CI960_07915 DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:parc03410]
D CI960_09430 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D CI960_01720 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D CI960_16605 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D CI960_15075 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D CI960_15675 endonuclease VIII K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D CI960_05680 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D CI960_09270 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CI960_14455 endonuclease/exonuclease/phosphatase family protein K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CI960_09715 deoxyribonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D CI960_21095 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CI960_05560 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CI960_07750 hypothetical protein K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CI960_07915 DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:parc03420]
D CI960_07020 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D CI960_22450 excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D CI960_08315 excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D CI960_04825 excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D CI960_21070 excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D CI960_08390 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CI960_21095 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CI960_07750 hypothetical protein K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CI960_07915 DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:parc03430]
D CI960_21160 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D CI960_09930 endonuclease MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D CI960_18145 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D CI960_08390 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CI960_19745 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D CI960_19740 xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D CI960_05560 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CI960_13755 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CI960_14280 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CI960_15070 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CI960_16405 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CI960_00470 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CI960_07425 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CI960_16865 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CI960_09290 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CI960_05400 DNA polymerase III subunit delta K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CI960_19830 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CI960_07430 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CI960_07970 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CI960_07750 hypothetical protein K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CI960_07915 DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CI960_22890 DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D CI960_15510 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:parc03440]
D CI960_05560 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CI960_13755 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CI960_14280 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CI960_15070 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CI960_16405 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CI960_04135 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D CI960_00890 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D CI960_11385 recombination protein RecR K06187 recR; recombination protein RecR
D CI960_11470 recA; DNA recombination/repair protein RecA K03553 recA; recombination protein RecA
D CI960_21095 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CI960_19520 Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D CI960_20820 Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D CI960_02475 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D CI960_19730 DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CI960_17125 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CI960_04380 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CI960_20130 AAA family ATPase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CI960_00470 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CI960_07425 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CI960_16865 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CI960_09290 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CI960_05400 DNA polymerase III subunit delta K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CI960_19830 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CI960_07430 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CI960_07970 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CI960_17675 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:parc02010]
D CI960_12545 molybdenum ABC transporter ATP-binding protein K05776 modF; molybdate transport system ATP-binding protein
D CI960_06420 spermidine/putrescine ABC transporter K11069 potD; spermidine/putrescine transport system substrate-binding protein
D CI960_06415 putrescine aminotransferase K11070 potC; spermidine/putrescine transport system permease protein
D CI960_06410 spermidine/putrescine ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein
D CI960_06405 polyamine ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D CI960_03600 glycine/betaine ABC transporter K02002 proX; glycine betaine/proline transport system substrate-binding protein
D CI960_03595 glycine/betaine ABC transporter K02001 proW; glycine betaine/proline transport system permease protein
D CI960_03590 glycine betaine/L-proline ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D CI960_03105 MCE family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D CI960_18215 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D CI960_18220 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D CI960_19160 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D CI960_18320 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D CI960_18325 pstA; phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein
D CI960_18330 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D CI960_21595 zinc ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D CI960_21995 metal ABC transporter permease K09816 znuB; zinc transport system permease protein
D CI960_21600 ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D CI960_22520 ABC transporter permease K09808 lolC_E; lipoprotein-releasing system permease protein
D CI960_16555 ABC transporter permease K09808 lolC_E; lipoprotein-releasing system permease protein
D CI960_20645 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D CI960_00515 YjgP/YjgQ family permease K07091 lptF; lipopolysaccharide export system permease protein
D CI960_07785 YjgP/YjgQ family permease K11720 lptG; lipopolysaccharide export system permease protein
D CI960_18205 lptB; ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D CI960_18260 cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D CI960_16530 phosphonate ABC transporter ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein
D CI960_18350 ABC transporter ATP-binding protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
C 02060 Phosphotransferase system (PTS)
C 03070 Bacterial secretion system [PATH:parc03070]
D CI960_22770 TolC family protein K12340 tolC; outer membrane protein
D CI960_00980 TolC family protein K12340 tolC; outer membrane protein
D CI960_05235 TolC family protein K12340 tolC; outer membrane protein
D CI960_10715 TolC family protein K12340 tolC; outer membrane protein
D CI960_07370 TolC family protein K12340 tolC; outer membrane protein
D CI960_07875 TolC family protein K12340 tolC; outer membrane protein
D CI960_22645 TolC family protein K12340 tolC; outer membrane protein
D CI960_01155 protein translocase subunit SecDF K12257 secDF; SecD/SecF fusion protein
D CI960_17535 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D CI960_04095 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D CI960_18005 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D CI960_14395 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D CI960_12405 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CI960_12585 secA; protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CI960_08410 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D CI960_04500 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CI960_05490 twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D CI960_05495 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:parc02020]
D CI960_18645 sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D CI960_20340 sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D CI960_08245 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D CI960_22160 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D CI960_19160 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D CI960_05300 deoxyribonuclease HsdR K04771 degP; serine protease Do [EC:3.4.21.107]
D CI960_05360 efflux RND transporter periplasmic adaptor subunit K07798 cusB; membrane fusion protein, copper/silver efflux system
D CI960_05370 cation transporter K07787 cusA; copper/silver efflux system protein
D CI960_02850 histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D CI960_02830 K+-transporting ATPase subunit A K01546 kdpA; potassium-transporting ATPase potassium-binding subunit
D CI960_02835 kdpB; K(+)-transporting ATPase subunit B K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]
D CI960_02840 K(+)-transporting ATPase subunit C K01548 kdpC; potassium-transporting ATPase KdpC subunit
D CI960_01450 sensor histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D CI960_03110 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D CI960_07555 DNA-binding response regulator K07672 trcR; two-component system, OmpR family, response regulator TrcR
D CI960_18445 sensor histidine kinase K13532 kinD; two-component system, sporulation sensor kinase D [EC:2.7.13.3]
D CI960_02890 hybrid sensor histidine kinase/response regulator K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D CI960_04400 hybrid sensor histidine kinase/response regulator K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D CI960_05100 glutamine synthetase type III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CI960_02035 glutamine synthetase type III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CI960_02780 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CI960_02120 sigma-54-dependent Fis family transcriptional regulator K07713 zraR; two-component system, NtrC family, response regulator HydG
D CI960_15475 sigma-54-dependent Fis family transcriptional regulator K07713 zraR; two-component system, NtrC family, response regulator HydG
D CI960_07145 sigma-54-dependent Fis family transcriptional regulator K07713 zraR; two-component system, NtrC family, response regulator HydG
D CI960_04395 sigma-54-dependent Fis family transcriptional regulator K07713 zraR; two-component system, NtrC family, response regulator HydG
D CI960_22105 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D CI960_02855 PAS domain-containing sensor histidine kinase K11383 kinB; two-component system, NtrC family, sensor histidine kinase KinB [EC:2.7.13.3]
D CI960_03685 PAS domain-containing sensor histidine kinase K11383 kinB; two-component system, NtrC family, sensor histidine kinase KinB [EC:2.7.13.3]
D CI960_13315 [Ni/Fe] hydrogenase small subunit K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
D CI960_13320 nickel-dependent hydrogenase large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D CI960_13325 cybH; Ni/Fe-hydrogenase, b-type cytochrome subunit K03620 hyaC; Ni/Fe-hydrogenase 1 B-type cytochrome subunit
D CI960_08015 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D CI960_19455 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D CI960_19460 cytochrome C oxidase assembly protein K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D CI960_22770 TolC family protein K12340 tolC; outer membrane protein
D CI960_00980 TolC family protein K12340 tolC; outer membrane protein
D CI960_05235 TolC family protein K12340 tolC; outer membrane protein
D CI960_10715 TolC family protein K12340 tolC; outer membrane protein
D CI960_07370 TolC family protein K12340 tolC; outer membrane protein
D CI960_07875 TolC family protein K12340 tolC; outer membrane protein
D CI960_22645 TolC family protein K12340 tolC; outer membrane protein
D CI960_06685 sugar transporter K01991 wza; polysaccharide biosynthesis/export protein
D CI960_11610 sugar transporter K01991 wza; polysaccharide biosynthesis/export protein
D CI960_03190 BexD/CtrA/VexA family polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D CI960_12910 sugar transporter K01991 wza; polysaccharide biosynthesis/export protein
D CI960_17670 low molecular weight phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D CI960_06690 tyrosine protein kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D CI960_11605 tyrosine protein kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D CI960_03195 chromosome partitioning protein ParA K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D CI960_12905 tyrosine protein kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D CI960_06755 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D CI960_10930 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D CI960_03315 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D CI960_12160 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D CI960_03225 UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D CI960_12165 UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D CI960_21850 RNA polymerase sigma-70 factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D CI960_10815 RNA polymerase sigma-70 factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D CI960_03060 RNA polymerase sigma-70 factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D CI960_00315 RNA polymerase sigma-70 factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D CI960_16325 RNA polymerase sigma-70 factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D CI960_18605 RNA polymerase sigma-70 factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D CI960_10695 RNA polymerase sigma-70 factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D CI960_21805 RNA polymerase sigma-70 factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D CI960_17875 RNA polymerase sigma-70 factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D CI960_22700 RNA polymerase sigma-70 factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D CI960_02740 RNA polymerase subunit sigma-70 K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D CI960_02670 RNA polymerase sigma-70 factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D CI960_20535 RNA polymerase sigma-70 factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D CI960_06200 RNA polymerase sigma-70 factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D CI960_06230 RNA polymerase sigma-70 factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D CI960_21735 RNA polymerase sigma-70 factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D CI960_17820 RNA polymerase sigma-70 factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D CI960_04605 RNA polymerase sigma-70 factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D CI960_16795 RNA polymerase sigma-70 factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D CI960_04610 anti-sigma factor K07165 fecR; transmembrane sensor
D CI960_17815 anti-sigma factor K07165 fecR; transmembrane sensor
D CI960_00325 anti-sigma factor K07165 fecR; transmembrane sensor
D CI960_09510 anti-sigma factor K07165 fecR; transmembrane sensor
D CI960_22695 anti-sigma factor K07165 fecR; transmembrane sensor
D CI960_18600 anti-sigma factor K07165 fecR; transmembrane sensor
D CI960_14630 anti-sigma factor K07165 fecR; transmembrane sensor
D CI960_06225 anti-sigma factor K07165 fecR; transmembrane sensor
D CI960_06245 anti-sigma factor K07165 fecR; transmembrane sensor
D CI960_10810 anti-sigma factor K07165 fecR; transmembrane sensor
D CI960_02745 anti-sigma factor K07165 fecR; transmembrane sensor
D CI960_03065 anti-sigma factor K07165 fecR; transmembrane sensor
D CI960_20595 anti-sigma factor K07165 fecR; transmembrane sensor
D CI960_16800 anti-sigma factor K07165 fecR; transmembrane sensor
D CI960_21745 anti-sigma factor K07165 fecR; transmembrane sensor
D CI960_21775 anti-sigma factor K07165 fecR; transmembrane sensor
D CI960_21810 RNA polymerase subunit sigma K07165 fecR; transmembrane sensor
D CI960_21915 anti-sigma factor K07165 fecR; transmembrane sensor
D CI960_17780 anti-sigma factor K07165 fecR; transmembrane sensor
D CI960_16140 hybrid sensor histidine kinase/response regulator K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D CI960_05500 arginase K01476 rocF; arginase [EC:3.5.3.1]
D CI960_19580 rocF; arginase K01476 rocF; arginase [EC:3.5.3.1]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:parc02024]
D CI960_06895 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D CI960_06890 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D CI960_08020 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D CI960_08305 amino acid permease K20265 gadC; glutamate:GABA antiporter
D CI960_07105 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase K08321 lsrF; 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase [EC:2.3.1.245]
D CI960_07015 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CI960_20005 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CI960_03355 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CI960_12365 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CI960_01310 o-succinylbenzoate--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CI960_03410 beta-mannosidase K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78]
D CI960_01630 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D CI960_11705 hypothetical protein K18139 oprM; outer membrane protein, multidrug efflux system
D CI960_04795 hypothetical protein K18139 oprM; outer membrane protein, multidrug efflux system
D CI960_08570 multidrug transporter K18139 oprM; outer membrane protein, multidrug efflux system
D CI960_13125 TolC family protein K18139 oprM; outer membrane protein, multidrug efflux system
D CI960_21000 hemolysin K11031 slo; thiol-activated cytolysin
D CI960_21005 hemolysin K11031 slo; thiol-activated cytolysin
D CI960_12405 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CI960_00235 peptidase S8 K14645 K14645; serine protease [EC:3.4.21.-]
D CI960_01155 protein translocase subunit SecDF K12257 secDF; SecD/SecF fusion protein
D CI960_17535 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D CI960_04095 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D CI960_18005 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D CI960_14395 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D CI960_12585 secA; protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CI960_08410 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D CI960_04500 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
D CI960_03645 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:parc02040]
D CI960_11820 glucosaminidase K02395 flgJ; peptidoglycan hydrolase FlgJ
D CI960_03645 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D CI960_05305 RNA polymerase subunit sigma K03086 rpoD; RNA polymerase primary sigma factor
D CI960_22105 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D CI960_17955 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CI960_23065 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:parc04980]
D CI960_22635 ATP:cob(I)alamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D CI960_09910 ATP--cob(I)alamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D CI960_01860 methylmalonyl Co-A mutase-associated GTPase MeaB K07588 MMAA; GTPase [EC:3.6.5.-]
D CI960_17690 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D CI960_17695 mutA; methylmalonyl-CoA mutase small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D CI960_12965 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:parc01501]
D CI960_15105 MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D CI960_07115 MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D CI960_08080 hypothetical protein K02172 blaR1; bla regulator protein blaR1
D CI960_22320 energy transducer TonB K02172 blaR1; bla regulator protein blaR1
D CI960_08075 transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D CI960_22315 transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D CI960_15790 CfxA family class A broad-spectrum beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D CI960_04785 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D CI960_22655 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D CI960_11715 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D CI960_20775 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D CI960_08580 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D CI960_13135 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D CI960_22650 AcrB/AcrD/AcrF family protein K18138 acrB; multidrug efflux pump
D CI960_11710 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D CI960_11705 hypothetical protein K18139 oprM; outer membrane protein, multidrug efflux system
D CI960_04795 hypothetical protein K18139 oprM; outer membrane protein, multidrug efflux system
D CI960_08570 multidrug transporter K18139 oprM; outer membrane protein, multidrug efflux system
D CI960_13125 TolC family protein K18139 oprM; outer membrane protein, multidrug efflux system
D CI960_22770 TolC family protein K12340 tolC; outer membrane protein
D CI960_00980 TolC family protein K12340 tolC; outer membrane protein
D CI960_05235 TolC family protein K12340 tolC; outer membrane protein
D CI960_10715 TolC family protein K12340 tolC; outer membrane protein
D CI960_07370 TolC family protein K12340 tolC; outer membrane protein
D CI960_07875 TolC family protein K12340 tolC; outer membrane protein
D CI960_22645 TolC family protein K12340 tolC; outer membrane protein
D CI960_13350 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CI960_14505 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D CI960_18710 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:parc01502]
D CI960_19595 D-alanine--D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CI960_23015 bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10]
D CI960_22925 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D CI960_18700 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CI960_18685 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:parc01503]
D CI960_03100 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CI960_07965 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CI960_05300 deoxyribonuclease HsdR K04771 degP; serine protease Do [EC:3.4.21.107]
D CI960_04785 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D CI960_22655 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D CI960_11715 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D CI960_20775 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D CI960_08580 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D CI960_13135 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D CI960_22650 AcrB/AcrD/AcrF family protein K18138 acrB; multidrug efflux pump
D CI960_11710 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D CI960_22770 TolC family protein K12340 tolC; outer membrane protein
D CI960_00980 TolC family protein K12340 tolC; outer membrane protein
D CI960_05235 TolC family protein K12340 tolC; outer membrane protein
D CI960_10715 TolC family protein K12340 tolC; outer membrane protein
D CI960_07370 TolC family protein K12340 tolC; outer membrane protein
D CI960_07875 TolC family protein K12340 tolC; outer membrane protein
D CI960_22645 TolC family protein K12340 tolC; outer membrane protein
D CI960_16965 acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:parc01000]
C 01001 Protein kinases [BR:parc01001]
D CI960_19605 PASTA domain-containing protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D CI960_05025 type II toxin-antitoxin system HipA family toxin K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D CI960_16390 type II toxin-antitoxin system HipA family toxin K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D CI960_09195 anti-sigma regulatory factor K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1]
D CI960_00910 ATP-binding protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D CI960_06690 tyrosine protein kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D CI960_11605 tyrosine protein kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D CI960_03195 chromosome partitioning protein ParA K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D CI960_12905 tyrosine protein kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D CI960_10555 hypothetical protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D CI960_18645 sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D CI960_20340 sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D CI960_02850 histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D CI960_01450 sensor histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D CI960_07955 two-component sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D CI960_02890 hybrid sensor histidine kinase/response regulator K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D CI960_04400 hybrid sensor histidine kinase/response regulator K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D CI960_18445 sensor histidine kinase K13532 kinD; two-component system, sporulation sensor kinase D [EC:2.7.13.3]
D CI960_19680 histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D CI960_02855 PAS domain-containing sensor histidine kinase K11383 kinB; two-component system, NtrC family, sensor histidine kinase KinB [EC:2.7.13.3]
D CI960_03685 PAS domain-containing sensor histidine kinase K11383 kinB; two-component system, NtrC family, sensor histidine kinase KinB [EC:2.7.13.3]
D CI960_01080 sensor histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D CI960_01085 sensor histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D CI960_16140 hybrid sensor histidine kinase/response regulator K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D CI960_00535 two-component system response regulator K19694 chiS; two-component system, sensor histidine kinase ChiS
D CI960_08670 hybrid sensor histidine kinase/response regulator K19694 chiS; two-component system, sensor histidine kinase ChiS
D CI960_10660 hybrid sensor histidine kinase/response regulator K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D CI960_07565 hybrid sensor histidine kinase/response regulator K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D CI960_12460 hybrid sensor histidine kinase/response regulator K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:parc01009]
D CI960_20110 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D CI960_00605 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CI960_01845 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CI960_07355 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D CI960_08905 serine/threonine-protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D CI960_09250 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:parc01002]
D CI960_12790 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D CI960_13330 hydrogenase maturation protease K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-]
D CI960_17620 aminopeptidase K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40]
D CI960_13400 glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D CI960_13405 GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D CI960_12310 hypothetical protein K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13]
D CI960_05045 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D CI960_06830 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D CI960_05130 glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D CI960_05120 asnB; asparagine synthase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D CI960_11010 DJ-1 family protein K03152 thiJ; protein deglycase [EC:3.5.1.124]
D CI960_12010 DJ-1 family protein K03152 thiJ; protein deglycase [EC:3.5.1.124]
D CI960_12015 linear amide C-N hydrolase K01442 cbh; choloylglycine hydrolase [EC:3.5.1.24]
D CI960_20790 peptidase K08659 pepDA; dipeptidase [EC:3.4.-.-]
D CI960_18200 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein
D CI960_08530 aminopeptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D CI960_06650 peptidase M3 K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5]
D CI960_06655 peptidase M3 K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5]
D CI960_04160 peptidase M3 K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5]
D CI960_12090 peptidase M13 K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D CI960_02550 peptidase M15 K08640 E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D CI960_21560 insulinase family protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D CI960_10825 peptidase M19 K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D CI960_00855 fused gamma-glutamyl-gamma-aminobutyrate hydrolase/peptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D CI960_05050 pepT; peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D CI960_15965 hypothetical protein K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D CI960_19110 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D CI960_16890 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D CI960_18000 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D CI960_22005 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D CI960_09205 Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D CI960_17600 aminopeptidase P family protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D CI960_04520 peptidase M28 K01302 CPQ; carboxypeptidase Q [EC:3.4.17.-]
D CI960_14365 ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CI960_13370 peptidase M48 K07387 K07387; metalloprotease [EC:3.4.24.-]
D CI960_02355 dihydrofolate reductase K01277 DPP3; dipeptidyl-peptidase III [EC:3.4.14.4]
D CI960_12600 rseP; RIP metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D CI960_08080 hypothetical protein K02172 blaR1; bla regulator protein blaR1
D CI960_22320 energy transducer TonB K02172 blaR1; bla regulator protein blaR1
D CI960_05300 deoxyribonuclease HsdR K04771 degP; serine protease Do [EC:3.4.21.107]
D CI960_20065 lysyl endopeptidase K01337 E3.4.21.50; lysyl endopeptidase [EC:3.4.21.50]
D CI960_20395 protease K01337 E3.4.21.50; lysyl endopeptidase [EC:3.4.21.50]
D CI960_00235 peptidase S8 K14645 K14645; serine protease [EC:3.4.21.-]
D CI960_20355 peptidase S8 K14647 vpr; minor extracellular serine protease Vpr [EC:3.4.21.-]
D CI960_21665 S9 family peptidase K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D CI960_17365 S9 family peptidase K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D CI960_17410 S9 family peptidase K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D CI960_01705 S9 family peptidase K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D CI960_22800 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D CI960_18190 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D CI960_14470 lon; endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D CI960_20495 S26 family signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CI960_20500 lepB; S26 family signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CI960_22755 peptidase S41 K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D CI960_01430 peptidase S41 K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D CI960_04150 peptidase S41 K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D CI960_22020 peptidase S41 K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D CI960_19835 protease K08676 tri; tricorn protease [EC:3.4.21.-]
D CI960_09855 peptidase S41 K08676 tri; tricorn protease [EC:3.4.21.-]
D CI960_19865 peptidase S41 K08676 tri; tricorn protease [EC:3.4.21.-]
D CI960_02975 sppA; signal peptide peptidase SppA K04773 sppA; protease IV [EC:3.4.21.-]
D CI960_15850 peptidase S51 K05995 pepE; dipeptidase E [EC:3.4.13.21]
D CI960_01130 DUF1751 domain-containing protein K07059 K07059; rhomboid family protein
D CI960_01135 rhomboid family intramembrane serine protease K07059 K07059; rhomboid family protein
D CI960_05510 isoaspartyl peptidase/L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D CI960_22200 collagenase-like protease K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D CI960_11690 collagenase-like protease K24847 rlhA; 23S rRNA 5-hydroxycytidine C2501 synthase
D CI960_08275 modulator protein K03592 pmbA; PmbA protein
D CI960_08280 peptidase U62 K03568 tldD; TldD protein
D CI960_08365 hypothetical protein K06894 yfhM; alpha-2-macroglobulin
C 01003 Glycosyltransferases [BR:parc01003]
D CI960_10680 polyprenol monophosphomannose synthase K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D CI960_04170 glycosyltransferase family 1 protein K16150 K16150; glycogen synthase [EC:2.4.1.11]
D CI960_04185 glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D CI960_12360 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D CI960_08355 pbpC; penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D CI960_13350 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CI960_03310 glycosyltransferase K02852 wecG; UDP-N-acetyl-D-mannosaminouronate:lipid I N-acetyl-D-mannosaminouronosyltransferase [EC:2.4.1.180]
D CI960_04940 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D CI960_06695 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D CI960_11300 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D CI960_03185 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D CI960_22275 glycosyltransferase K05841 E2.4.1.173; sterol 3beta-glucosyltransferase [EC:2.4.1.173]
D CI960_02805 bifunctional alpha,alpha-trehalose-phosphate synthase (UDP-forming)/trehalose-phosphatase K16055 TPS; trehalose 6-phosphate synthase/phosphatase [EC:2.4.1.15 3.1.3.12]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:parc01005]
D CI960_16965 acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D CI960_19390 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D CI960_16960 bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/3-hydroxyacyl-ACP dehydratase K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59]
D CI960_16955 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D CI960_19155 UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D CI960_02970 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D CI960_03335 acetyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D CI960_17625 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D CI960_04845 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D CI960_19365 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D CI960_12390 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D CI960_03955 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D CI960_20735 SIS domain-containing protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D CI960_13510 O-antigen ligase domain-containing protein K02847 waaL; O-antigen ligase [EC:2.4.99.26]
D CI960_06790 SIS domain-containing protein K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D CI960_06390 glycosyltransferase K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D CI960_04940 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D CI960_06695 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D CI960_11300 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D CI960_03185 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:parc01011]
D CI960_12620 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CI960_09455 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CI960_18680 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D CI960_18695 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D CI960_18705 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CI960_23015 bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10]
D CI960_19595 D-alanine--D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CI960_01665 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D CI960_18700 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CI960_18685 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D CI960_18250 undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CI960_08470 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CI960_13350 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CI960_08355 pbpC; penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D CI960_14505 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D CI960_18710 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D CI960_22800 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D CI960_12360 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D CI960_02550 peptidase M15 K08640 E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D CI960_12310 hypothetical protein K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13]
D CI960_18975 lytic transglycosylase K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D CI960_08010 lytic transglycosylase K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D CI960_08865 lytic transglycosylase F K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29]
D CI960_11175 glutamine ABC transporter substrate-binding protein K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29]
D CI960_13265 aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D CI960_08965 septal ring lytic transglycosylase RlpA family lipoprotein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D CI960_03100 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CI960_07965 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:parc01004]
D CI960_05485 fabD; [acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D CI960_18430 3-oxoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CI960_01220 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CI960_01295 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CI960_01320 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CI960_11730 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CI960_20385 fabF; beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CI960_01305 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CI960_11725 fabG; beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CI960_04065 NAD(P)-dependent oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CI960_16960 bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/3-hydroxyacyl-ACP dehydratase K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59]
D CI960_23010 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D CI960_06640 nitronate monooxygenase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D CI960_17460 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CI960_07015 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CI960_20005 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CI960_03355 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CI960_12365 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CI960_01310 o-succinylbenzoate--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CI960_17850 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:parc01006]
D CI960_01820 polyprenyl synthetase family protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D CI960_21090 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D CI960_01645 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CI960_04850 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D CI960_16990 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D CI960_12030 1,4-dihydroxy-2-naphthoate polyprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
C 01007 Amino acid related enzymes [BR:parc01007]
D CI960_17630 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CI960_11130 glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D CI960_21475 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CI960_00310 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D CI960_20435 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CI960_01120 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CI960_20195 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CI960_12800 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CI960_02435 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CI960_21215 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CI960_03855 lysS; DUF4332 domain-containing protein K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CI960_11210 aspartate--tRNA(Asp/Asn) ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CI960_01775 asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D CI960_02380 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CI960_22250 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D CI960_12305 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CI960_08660 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CI960_07250 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CI960_18920 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CI960_08215 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CI960_09885 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CI960_00505 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CI960_16560 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CI960_05105 LL-diaminopimelate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D CI960_11080 aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D CI960_08555 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CI960_09900 kbl; glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D CI960_20990 2-amino-3-ketobutyrate CoA ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D CI960_14485 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D CI960_14680 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D CI960_16825 pyridoxal phosphate-dependent aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CI960_08625 pyridoxal phosphate-dependent aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CI960_19585 rocD; ornithine--oxo-acid transaminase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D CI960_03445 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D CI960_14675 adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D CI960_05415 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CI960_20510 phnW; 2-aminoethylphosphonate--pyruvate transaminase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]
D CI960_12480 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D CI960_20190 DegT/DnrJ/EryC1/StrS family aminotransferase K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:parc00194]
D CI960_04765 atpC; ATP synthase F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D CI960_04770 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D CI960_04730 atpG; ATP synthase F1 subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D CI960_04735 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D CI960_04740 atpH; ATP synthase F1 subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D CI960_04745 atpF; ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D CI960_04750 atpE; ATP synthase F0 subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D CI960_04755 atpB; ATP synthase F0 subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:parc03000]
D CI960_10420 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D CI960_21175 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D CI960_12690 AraC family transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D CI960_05205 AraC family transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D CI960_15660 AraC family transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D CI960_20240 AraC family transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D CI960_07570 AraC family transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D CI960_20770 AraC family transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D CI960_07860 AraC family transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D CI960_12080 AraC family transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D CI960_08585 AraC family transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D CI960_20100 AraC family transcriptional regulator K20968 exsA; AraC family transcriptional regulator, exoenzyme S synthesis regulatory protein ExsA
D CI960_16645 AraC family transcriptional regulator K13652 K13652; AraC family transcriptional regulator
D CI960_09955 AraC family transcriptional regulator K13652 K13652; AraC family transcriptional regulator
D CI960_10685 DNA-binding transcriptional regulator OxyR K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D CI960_13360 LysR family transcriptional regulator K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon
D CI960_01945 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D CI960_12055 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D CI960_13145 transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D CI960_01780 transcriptional regulator K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D CI960_19755 transcriptional regulator K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D CI960_18950 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D CI960_07375 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D CI960_02365 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D CI960_04490 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D CI960_04840 Crp/Fnr family transcriptional regulator K21556 malR; CRP/FNR family transcriptional regulator, polysaccharide utilization system transcription regulator
D CI960_01740 Crp/Fnr family transcriptional regulator K21562 flp; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D CI960_05700 Crp/Fnr family transcriptional regulator K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator
D CI960_03675 Crp/Fnr family transcriptional regulator K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator
D CI960_20010 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator
D CI960_08075 transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D CI960_22315 transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D CI960_19015 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D CI960_02820 Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D CI960_19090 redox-sensing transcriptional repressor Rex K01926 rex; redox-sensing transcriptional repressor
D CI960_08840 transcriptional regulator K07727 K07727; putative transcriptional regulator
D CI960_19800 transcriptional regulator K07729 K07729; putative transcriptional regulator
D CI960_15460 XRE family transcriptional regulator K07729 K07729; putative transcriptional regulator
D CI960_06955 nickel-responsive transcriptional regulator NikR K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator
D CI960_13730 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CI960_18985 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CI960_03465 ArgR family transcriptional regulator K03402 argR; transcriptional regulator of arginine metabolism
D CI960_04820 PspC domain-containing protein K03973 pspC; phage shock protein C
D CI960_11370 hypothetical protein K07735 algH; putative transcriptional regulator
D CI960_12795 molecular chaperone DnaK K06204 dksA; RNA polymerase-binding transcription factor
C 03021 Transcription machinery [BR:parc03021]
D CI960_17970 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D CI960_17505 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CI960_17500 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CI960_05305 RNA polymerase subunit sigma K03086 rpoD; RNA polymerase primary sigma factor
D CI960_06915 RNA polymerase sigma-70 factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CI960_14745 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CI960_19420 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CI960_21850 RNA polymerase sigma-70 factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D CI960_10815 RNA polymerase sigma-70 factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D CI960_03060 RNA polymerase sigma-70 factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D CI960_00315 RNA polymerase sigma-70 factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D CI960_16325 RNA polymerase sigma-70 factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D CI960_18605 RNA polymerase sigma-70 factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D CI960_10695 RNA polymerase sigma-70 factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D CI960_21805 RNA polymerase sigma-70 factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D CI960_17875 RNA polymerase sigma-70 factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D CI960_22700 RNA polymerase sigma-70 factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D CI960_02740 RNA polymerase subunit sigma-70 K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D CI960_02670 RNA polymerase sigma-70 factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D CI960_20535 RNA polymerase sigma-70 factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D CI960_06200 RNA polymerase sigma-70 factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D CI960_06230 RNA polymerase sigma-70 factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D CI960_21735 RNA polymerase sigma-70 factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D CI960_17820 RNA polymerase sigma-70 factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D CI960_04605 RNA polymerase sigma-70 factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D CI960_16795 RNA polymerase sigma-70 factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D CI960_22105 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D CI960_00780 transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D CI960_14390 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D CI960_17530 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
D CI960_12930 transcriptional regulator K02601 nusG; transcription termination/antitermination protein NusG
D CI960_09195 anti-sigma regulatory factor K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1]
D CI960_01095 fused response regulator/phosphatase K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D CI960_00915 anti-sigma factor antagonist K04749 rsbV; anti-sigma B factor antagonist
D CI960_00910 ATP-binding protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D CI960_12795 molecular chaperone DnaK K06204 dksA; RNA polymerase-binding transcription factor
D CI960_20025 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D CI960_11190 transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:parc03019]
D CI960_15085 ribonuclease E/G K08301 rng; ribonuclease G [EC:3.1.26.-]
D CI960_20390 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CI960_14555 rny; ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D CI960_22730 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D CI960_09520 ATP-dependent helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D CI960_11185 ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D CI960_20765 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CI960_09525 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D CI960_18180 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D CI960_05555 RecQ family ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D CI960_17955 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CI960_23065 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CI960_20035 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D CI960_11190 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D CI960_00605 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CI960_01845 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CI960_15090 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D CI960_17140 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D CI960_02395 groL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CI960_17345 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D CI960_16700 tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
C 03041 Spliceosome
C 03011 Ribosome [BR:parc03011]
D CI960_19305 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D CI960_00495 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D CI960_18075 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D CI960_17975 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D CI960_18020 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D CI960_03085 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D CI960_18120 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D CI960_18035 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D CI960_00490 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D CI960_18110 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D CI960_17980 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D CI960_18125 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D CI960_17985 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D CI960_18040 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D CI960_20085 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D CI960_05750 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D CI960_18060 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D CI960_03090 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D CI960_18085 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D CI960_00875 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D CI960_17580 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D CI960_17520 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D CI960_18090 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D CI960_18105 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D CI960_18100 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D CI960_18045 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D CI960_18030 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D CI960_03095 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D CI960_17515 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D CI960_17525 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D CI960_17510 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D CI960_00485 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D CI960_18055 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D CI960_18010 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D CI960_18070 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D CI960_17965 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D CI960_18025 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D CI960_17900 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D CI960_07265 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D CI960_05035 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D CI960_18080 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D CI960_18095 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D CI960_18050 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D CI960_05040 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D CI960_07410 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D CI960_18065 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D CI960_18015 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D CI960_14830 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31
D CI960_18435 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D CI960_07415 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D CI960_19610 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D CI960_07260 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D CI960_17990 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D CI960_05165 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D CI960_03020 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CI960_03790 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CI960_05345 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CI960_13200 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CI960_18450 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CI960_19905 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CI960_20540 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CI960_03000 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CI960_20560 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CI960_03770 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CI960_05325 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CI960_18470 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CI960_19925 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CI960_13220 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CI960_18455 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CI960_20545 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CI960_05340 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CI960_03015 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CI960_03785 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CI960_13205 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CI960_19910 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:parc03009]
D CI960_20390 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CI960_09375 helicase K19036 IGHMBP2; ATP-dependent RNA/DNA helicase IGHMBP2 [EC:5.6.2.5 5.6.2.3]
D CI960_18425 GTPase Era K03595 era; GTPase
D CI960_14585 GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
D CI960_12795 molecular chaperone DnaK K06204 dksA; RNA polymerase-binding transcription factor
D CI960_00780 transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D CI960_14390 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D CI960_17530 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
D CI960_12930 transcriptional regulator K02601 nusG; transcription termination/antitermination protein NusG
D CI960_19120 ribosomal RNA small subunit methyltransferase A K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D CI960_18755 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D CI960_13390 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D CI960_12665 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D CI960_18720 ribosomal RNA small subunit methyltransferase H K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D CI960_18780 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D CI960_17325 SAM-dependent methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D CI960_07490 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D CI960_16845 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D CI960_13080 class I SAM-dependent rRNA methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D CI960_21660 RNA methyltransferase K25137 rlmL; 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.173]
D CI960_04045 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D CI960_08870 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D CI960_17290 RluA family pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D CI960_01770 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D CI960_19600 pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D CI960_02430 pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D CI960_11720 RNA pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D CI960_03045 pseudouridine synthase K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
D CI960_12615 rimM; 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D CI960_08415 rimO; 30S ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D CI960_04875 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D CI960_15085 ribonuclease E/G K08301 rng; ribonuclease G [EC:3.1.26.-]
D CI960_07225 Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D CI960_20765 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CI960_22980 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D CI960_18420 GTPase Der K03977 engA; GTPase
D CI960_22475 hflX; GTPase HflX K03665 hflX; GTPase
D CI960_05565 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D CI960_16695 RelA/SpoT family protein K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D CI960_18945 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D CI960_22515 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D CI960_00775 ribosome assembly cofactor RimP K09748 rimP; ribosome maturation factor RimP
D CI960_14360 rsfS; ribosome silencing factor RsfS K09710 ybeB; ribosome-associated protein
D CI960_17570 raiA; ribosomal subunit interface protein K05808 hpf; ribosome hibernation promoting factor
D CI960_21105 redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase
D CI960_18440 hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:parc03016]
D CI960_19470 ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D CI960_17630 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CI960_08660 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CI960_12800 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CI960_21215 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CI960_20195 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CI960_11130 glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D CI960_01120 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CI960_03855 lysS; DUF4332 domain-containing protein K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CI960_11210 aspartate--tRNA(Asp/Asn) ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CI960_18920 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CI960_01775 asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D CI960_22250 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D CI960_07250 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CI960_12305 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CI960_20435 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CI960_02435 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CI960_02380 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CI960_08215 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CI960_09885 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CI960_21475 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CI960_00310 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D CI960_21075 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D CI960_20020 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D CI960_01400 tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D CI960_14785 tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D CI960_18245 truB; tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D CI960_02350 tRNA 2-thiouridine(34) synthase MnmA K21027 TRMU; tRNA-5-taurinomethyluridine 2-sulfurtransferase [EC:2.8.1.14]
D CI960_05565 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D CI960_04850 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D CI960_16990 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D CI960_17045 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D CI960_21060 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D CI960_07880 cysQ; 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D CI960_21460 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D CI960_05295 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA
D CI960_10510 energy-dependent translational throttle protein EttA K06020 ettA; energy-dependent translational throttle protein EttA
D CI960_11055 Cys-tRNA(Pro) deacylase K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D CI960_19035 nucleoside deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D CI960_22195 tRNA dihydrouridine synthase DusB K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D CI960_18305 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D CI960_03340 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D CI960_09890 tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D CI960_14475 tRNA (adenosine(37)-N6)-methyltransferase TrmM K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223]
D CI960_12775 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D CI960_17290 RluA family pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D CI960_17000 tRNA 2-thiocytidine(32) synthetase TtcA K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D CI960_18240 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D CI960_01915 S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D CI960_02715 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D CI960_10665 6-carboxytetrahydropterin synthase QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D CI960_10670 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D CI960_02720 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D CI960_21585 queG; tRNA epoxyqueuosine(34) reductase QueG K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D CI960_07790 tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D CI960_11195 tilS; tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D CI960_03905 tsaB; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D CI960_12340 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D CI960_22720 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D CI960_20640 tRNA threonylcarbamoyladenosine dehydratase K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D CI960_22730 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D CI960_20035 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D CI960_01360 PIN domain-containing protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
C 03012 Translation factors [BR:parc03012]
D CI960_19060 translation initiation factor K03113 EIF1; translation initiation factor 1
D CI960_00785 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D CI960_07255 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D CI960_04585 ABC transporter ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D CI960_05760 glycosyl transferase family 2 K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D CI960_09375 helicase K19036 IGHMBP2; ATP-dependent RNA/DNA helicase IGHMBP2 [EC:5.6.2.5 5.6.2.3]
D CI960_00500 elongation factor Ts K02357 tsf; elongation factor Ts
D CI960_17545 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D CI960_18115 fusA; elongation factor G K02355 fusA; elongation factor G
D CI960_02005 elongation factor G K02355 fusA; elongation factor G
D CI960_16945 peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D CI960_22975 ribosome-recycling factor K02838 frr; ribosome recycling factor
D CI960_01625 peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D CI960_05160 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D CI960_17995 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D CI960_19140 efp; elongation factor P K02356 efp; elongation factor P
D CI960_20000 peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D CI960_18800 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
C 03110 Chaperones and folding catalysts [BR:parc03110]
D CI960_09830 clpB; ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D CI960_09160 ATP-dependent Clp protease ATP-binding subunit K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D CI960_18185 ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D CI960_07355 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D CI960_15090 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D CI960_17140 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D CI960_02395 groL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CI960_09915 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D CI960_05270 J domain-containing protein K05516 cbpA; curved DNA-binding protein
D CI960_00150 molecular chaperone DjlA K05801 djlA; DnaJ like chaperone protein
D CI960_09920 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D CI960_00615 heat-shock protein K13993 HSP20; HSP20 family protein
D CI960_03615 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein
D CI960_05155 heat-shock protein Hsp15 K04762 hslR; ribosome-associated heat shock protein Hsp15
D CI960_02390 co-chaperone GroES K04078 groES; chaperonin GroES
D CI960_01555 co-chaperone GroES K04078 groES; chaperonin GroES
D CI960_05300 deoxyribonuclease HsdR K04771 degP; serine protease Do [EC:3.4.21.107]
D CI960_14365 ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CI960_04755 atpB; ATP synthase F0 subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D CI960_18570 hypothetical protein K06006 cpxP; periplasmic protein CpxP/Spy
D CI960_13290 hypA; hydrogenase nickel incorporation protein HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D CI960_13285 hypB; hydrogenase accessory protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB
D CI960_00235 peptidase S8 K14645 K14645; serine protease [EC:3.4.21.-]
D CI960_20355 peptidase S8 K14647 vpr; minor extracellular serine protease Vpr [EC:3.4.21.-]
D CI960_18855 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D CI960_10525 beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D CI960_07280 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D CI960_03350 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D CI960_05535 peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D CI960_04040 peptidylprolyl isomerase K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D CI960_19760 peptidylprolyl isomerase K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D CI960_17405 peptidylprolyl isomerase K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D CI960_22255 peptidylprolyl isomerase K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8]
D CI960_19765 peptidylprolyl isomerase K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8]
D CI960_16830 peptidylprolyl isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D CI960_18160 peptidylprolyl isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D CI960_18170 parvulin peptidyl-prolyl isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D CI960_00465 trxA; thioredoxin K03671 TXN; thioredoxin
D CI960_07350 thioredoxin K03671 TXN; thioredoxin
D CI960_12735 trxA; thioredoxin K03671 TXN; thioredoxin
D CI960_05740 trxA; thioredoxin K03671 TXN; thioredoxin
D CI960_14725 trxA; thioredoxin K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:parc04131]
D CI960_12150 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D CI960_04630 glycoside hydrolase K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D CI960_01950 alpha-mannosidase K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D CI960_01995 alpha-mannosidase K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D CI960_21900 hypothetical protein K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D CI960_09965 hexokinase K00844 HK; hexokinase [EC:2.7.1.1]
D CI960_04855 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CI960_00620 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D CI960_06920 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D CI960_19355 histidine phosphatase family protein K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D CI960_22505 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CI960_07355 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system
C 03051 Proteasome [BR:parc03051]
D CI960_07355 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:parc03032]
D CI960_20300 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D CI960_10420 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D CI960_21175 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D CI960_09465 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D CI960_00740 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D CI960_01125 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D CI960_15080 integration host factor subunit beta K03530 hupB; DNA-binding protein HU-beta
D CI960_03840 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D CI960_08420 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D CI960_03110 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D CI960_07300 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D CI960_10610 DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D CI960_14325 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D CI960_10615 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D CI960_13755 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CI960_14280 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CI960_15070 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CI960_16405 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CI960_00470 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CI960_07425 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CI960_09290 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CI960_05400 DNA polymerase III subunit delta K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CI960_19830 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CI960_07430 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CI960_07970 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CI960_16865 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CI960_00840 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D CI960_21095 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CI960_07750 hypothetical protein K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CI960_07915 DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CI960_22890 DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D CI960_15510 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D CI960_09165 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D CI960_00865 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D CI960_22230 DNA topoisomerase IV K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D CI960_22745 type IIA DNA topoisomerase subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D CI960_01110 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D CI960_10125 type IA DNA topoisomerase K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
D CI960_05990 type IA DNA topoisomerase K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
D CI960_06195 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
D CI960_02085 type IA DNA topoisomerase K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
D CI960_15605 type IA DNA topoisomerase K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
D CI960_16220 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
D CI960_04445 type IA DNA topoisomerase K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:parc03036]
D CI960_10420 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D CI960_21175 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D CI960_20390 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CI960_09465 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D CI960_00740 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D CI960_01125 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D CI960_15080 integration host factor subunit beta K03530 hupB; DNA-binding protein HU-beta
D CI960_03840 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D CI960_08420 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D CI960_05270 J domain-containing protein K05516 cbpA; curved DNA-binding protein
D CI960_05275 hypothetical protein K18997 cbpM; chaperone modulatory protein CbpM
D CI960_03110 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D CI960_07040 DNA starvation/stationary phase protection protein K04047 dps; starvation-inducible DNA-binding protein
D CI960_07050 DNA starvation/stationary phase protection protein K04047 dps; starvation-inducible DNA-binding protein
D CI960_02820 Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D CI960_18950 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D CI960_18670 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D CI960_16530 phosphonate ABC transporter ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein
D CI960_18710 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D CI960_13045 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D CI960_18675 cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D CI960_18690 rod shape-determining protein RodA K03588 ftsW; cell division protein FtsW
D CI960_18260 cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D CI960_18665 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D CI960_03100 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CI960_07965 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CI960_04785 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D CI960_22655 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D CI960_11715 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D CI960_20775 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D CI960_08580 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D CI960_13135 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D CI960_14520 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D CI960_14515 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D CI960_14500 rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D CI960_13750 ParA family protein K03496 parA; chromosome partitioning protein
D CI960_18990 ParA family protein K03496 parA; chromosome partitioning protein
D CI960_16095 ParA family protein K03496 parA; chromosome partitioning protein
D CI960_13730 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CI960_18985 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CI960_22230 DNA topoisomerase IV K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D CI960_22745 type IIA DNA topoisomerase subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D CI960_21060 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D CI960_12665 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D CI960_17575 recombinase K03733 xerC; integrase/recombinase XerC
D CI960_22495 xerD; site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D CI960_04925 integrase K04763 xerD; integrase/recombinase XerD
D CI960_01160 integrase K04763 xerD; integrase/recombinase XerD
D CI960_06105 recombinase K04763 xerD; integrase/recombinase XerD
D CI960_06660 integrase K04763 xerD; integrase/recombinase XerD
D CI960_10990 integrase K04763 xerD; integrase/recombinase XerD
D CI960_02520 integrase K04763 xerD; integrase/recombinase XerD
D CI960_11320 integrase K04763 xerD; integrase/recombinase XerD
D CI960_12270 integrase K04763 xerD; integrase/recombinase XerD
D CI960_08085 integrase K04763 xerD; integrase/recombinase XerD
D CI960_12940 integrase K04763 xerD; integrase/recombinase XerD
D CI960_01395 MRP family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D CI960_11415 GTP-binding protein K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:parc03400]
D CI960_04695 methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D CI960_01720 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D CI960_16605 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D CI960_15075 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D CI960_09430 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D CI960_06305 DNA mismatch repair protein MutT K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D CI960_07825 NUDIX domain-containing protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D CI960_22130 dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D CI960_05680 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D CI960_15675 endonuclease VIII K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D CI960_09270 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CI960_14455 endonuclease/exonuclease/phosphatase family protein K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CI960_09715 deoxyribonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D CI960_05560 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CI960_07750 hypothetical protein K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CI960_07915 DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CI960_21095 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CI960_22450 excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D CI960_08315 excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D CI960_04825 excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D CI960_21070 excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D CI960_08390 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CI960_17505 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CI960_17500 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CI960_17970 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D CI960_07020 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D CI960_21160 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D CI960_09930 endonuclease MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D CI960_18145 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D CI960_19745 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D CI960_19740 xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D CI960_00470 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CI960_07425 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CI960_09290 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CI960_05400 DNA polymerase III subunit delta K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CI960_19830 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CI960_07430 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CI960_07970 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CI960_16865 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CI960_13755 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CI960_14280 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CI960_15070 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CI960_16405 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CI960_22890 DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D CI960_15510 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D CI960_16550 very short patch repair endonuclease K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
D CI960_11470 recA; DNA recombination/repair protein RecA K03553 recA; recombination protein RecA
D CI960_19520 Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D CI960_20820 Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D CI960_02475 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D CI960_17675 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D CI960_05655 ATP-dependent exonuclease K03546 sbcC; DNA repair protein SbcC/Rad50
D CI960_05650 exonuclease sbcCD subunit D K03547 sbcD; DNA repair protein SbcD/Mre11
D CI960_05515 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D CI960_04135 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D CI960_19730 DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CI960_17125 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CI960_04380 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CI960_20130 AAA family ATPase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CI960_00890 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D CI960_11385 recombination protein RecR K06187 recR; recombination protein RecR
D CI960_07450 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D CI960_09635 type I-C CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D CI960_12745 subtype II CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D CI960_09165 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D CI960_00865 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D CI960_01110 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D CI960_09465 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D CI960_00740 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D CI960_01125 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D CI960_15080 integration host factor subunit beta K03530 hupB; DNA-binding protein HU-beta
D CI960_03840 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D CI960_08420 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D CI960_02820 Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D CI960_09525 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D CI960_18180 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D CI960_05555 RecQ family ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D CI960_12130 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D CI960_21260 DNA damage-inducible protein D K14623 dinD; DNA-damage-inducible protein D
D CI960_01620 hypothetical protein K03565 recX; regulatory protein
D CI960_03115 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CI960_06165 bifunctional oligoribonuclease/PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:parc03029]
D CI960_00785 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D CI960_07255 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D CI960_00500 elongation factor Ts K02357 tsf; elongation factor Ts
D CI960_17545 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D CI960_18115 fusA; elongation factor G K02355 fusA; elongation factor G
D CI960_02005 elongation factor G K02355 fusA; elongation factor G
D CI960_18425 GTPase Era K03595 era; GTPase
D CI960_21475 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CI960_21215 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CI960_11210 aspartate--tRNA(Asp/Asn) ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CI960_22250 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D CI960_01120 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CI960_10730 DNA/RNA non-specific endonuclease K01173 ENDOG; endonuclease G, mitochondrial
D CI960_13755 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CI960_14280 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CI960_15070 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CI960_16405 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CI960_01650 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family
D CI960_15090 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D CI960_17140 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D CI960_09920 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D CI960_02395 groL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CI960_02390 co-chaperone GroES K04078 groES; chaperonin GroES
D CI960_01555 co-chaperone GroES K04078 groES; chaperonin GroES
D CI960_09915 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D CI960_01395 MRP family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D CI960_12405 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CI960_07355 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:parc02000]
D CI960_18350 ABC transporter ATP-binding protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D CI960_01470 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D CI960_20910 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D CI960_22095 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D CI960_16600 ABC transporter ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein
D CI960_12545 molybdenum ABC transporter ATP-binding protein K05776 modF; molybdate transport system ATP-binding protein
D CI960_06420 spermidine/putrescine ABC transporter K11069 potD; spermidine/putrescine transport system substrate-binding protein
D CI960_06415 putrescine aminotransferase K11070 potC; spermidine/putrescine transport system permease protein
D CI960_06410 spermidine/putrescine ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein
D CI960_06405 polyamine ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D CI960_03600 glycine/betaine ABC transporter K02002 proX; glycine betaine/proline transport system substrate-binding protein
D CI960_03595 glycine/betaine ABC transporter K02001 proW; glycine betaine/proline transport system permease protein
D CI960_03590 glycine betaine/L-proline ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D CI960_11035 hypothetical protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D CI960_03105 MCE family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D CI960_18215 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D CI960_18220 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D CI960_19160 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D CI960_18320 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D CI960_18325 pstA; phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein
D CI960_18330 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D CI960_00195 ABC transporter substrate-binding protein K25034 btuF; cobalamin transport system substrate-binding protein
D CI960_08790 iron ABC transporter substrate-binding protein K25034 btuF; cobalamin transport system substrate-binding protein
D CI960_01525 iron ABC transporter permease K25027 btuC; cobalamin transport system permease protein
D CI960_08795 iron ABC transporter permease K25027 btuC; cobalamin transport system permease protein
D CI960_08800 ABC transporter ATP-binding protein K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8]
D CI960_01530 ABC transporter ATP-binding protein K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8]
D CI960_21595 zinc ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D CI960_21995 metal ABC transporter permease K09816 znuB; zinc transport system permease protein
D CI960_21600 ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D CI960_00515 YjgP/YjgQ family permease K07091 lptF; lipopolysaccharide export system permease protein
D CI960_07785 YjgP/YjgQ family permease K11720 lptG; lipopolysaccharide export system permease protein
D CI960_18205 lptB; ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D CI960_10850 ABC transporter permease K25180 ybhR; drug efflux transport system permease protein
D CI960_10855 ABC transporter permease K25181 ybhS; drug efflux transport system permease protein
D CI960_10860 ABC transporter ATP-binding protein K25182 ybhF; drug efflux transport system ATP-binding protein
D CI960_10865 ABC transporter ATP-binding protein K25182 ybhF; drug efflux transport system ATP-binding protein
D CI960_10870 hypothetical protein K25183 ybhG; membrane fusion protein YbhG
D CI960_22520 ABC transporter permease K09808 lolC_E; lipoprotein-releasing system permease protein
D CI960_16555 ABC transporter permease K09808 lolC_E; lipoprotein-releasing system permease protein
D CI960_20645 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D CI960_18260 cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D CI960_16530 phosphonate ABC transporter ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein
D CI960_14335 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D CI960_11930 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D CI960_11935 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D CI960_03815 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D CI960_03820 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D CI960_09220 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CI960_14330 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CI960_22785 multidrug ABC transporter substrate-binding protein K02004 ABC.CD.P; putative ABC transport system permease protein
D CI960_05245 multidrug ABC transporter substrate-binding protein K02004 ABC.CD.P; putative ABC transport system permease protein
D CI960_05250 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D CI960_00990 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D CI960_00995 multidrug ABC transporter substrate-binding protein K02004 ABC.CD.P; putative ABC transport system permease protein
D CI960_14890 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D CI960_14895 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D CI960_14900 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D CI960_14910 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D CI960_14940 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D CI960_14960 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D CI960_06470 multidrug ABC transporter substrate-binding protein K02004 ABC.CD.P; putative ABC transport system permease protein
D CI960_06475 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D CI960_06485 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D CI960_11400 multidrug ABC transporter substrate-binding protein K02004 ABC.CD.P; putative ABC transport system permease protein
D CI960_07845 multidrug ABC transporter substrate-binding protein K02004 ABC.CD.P; putative ABC transport system permease protein
D CI960_00425 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D CI960_14885 cell division protein FtsX K02004 ABC.CD.P; putative ABC transport system permease protein
D CI960_14905 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D CI960_14935 cell division protein FtsX K02004 ABC.CD.P; putative ABC transport system permease protein
D CI960_14955 multidrug ABC transporter substrate-binding protein K02004 ABC.CD.P; putative ABC transport system permease protein
D CI960_06340 multidrug ABC transporter substrate-binding protein K02004 ABC.CD.P; putative ABC transport system permease protein
D CI960_06490 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D CI960_20430 multidrug ABC transporter substrate-binding protein K02004 ABC.CD.P; putative ABC transport system permease protein
D CI960_22780 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CI960_01000 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CI960_14930 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CI960_06465 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CI960_00800 sufC; ABC transporter ATP-binding protein K09013 sufC; Fe-S cluster assembly ATP-binding protein
D CI960_02025 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump
D CI960_11105 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump
D CI960_05395 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D CI960_01680 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D CI960_12710 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D CI960_05285 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D CI960_09600 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D CI960_17310 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D CI960_11095 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D CI960_04200 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D CI960_02900 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D CI960_21360 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D CI960_01535 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D CI960_02785 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D CI960_05720 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D CI960_07840 D-xylose transporter XylE K08138 xylE; MFS transporter, SP family, xylose:H+ symportor
D CI960_06315 MFS transporter K02429 fucP; MFS transporter, FHS family, L-fucose permease
D CI960_03630 sugar MFS transporter K02429 fucP; MFS transporter, FHS family, L-fucose permease
D CI960_01955 MFS transporter K02429 fucP; MFS transporter, FHS family, L-fucose permease
D CI960_06525 MFS transporter K02429 fucP; MFS transporter, FHS family, L-fucose permease
D CI960_20950 MFS transporter K08194 dgoT; MFS transporter, ACS family, D-galactonate transporter
D CI960_15105 MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D CI960_07115 MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D CI960_21100 MFS transporter AraJ K08156 araJ; MFS transporter, DHA1 family, arabinose polymer utilization protein
D CI960_14810 MFS transporter K08169 yebQ; MFS transporter, DHA2 family, multidrug resistance protein
D CI960_11110 MFS transporter K08169 yebQ; MFS transporter, DHA2 family, multidrug resistance protein
D CI960_12715 MFS transporter K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein
D CI960_11950 MFS transporter K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein
D CI960_13335 aquaporin family protein K02440 glpF; glycerol uptake facilitator
D CI960_08445 aerotolerance regulator BatA K07114 yfbK; Ca-activated chloride channel homolog
D CI960_08450 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog
D CI960_03700 mscL; large conductance mechanosensitive channel protein MscL K03282 mscL; large conductance mechanosensitive channel
D CI960_16720 mechanosensitive ion channel protein MscS K03442 mscS; small conductance mechanosensitive channel
D CI960_08510 hypothetical protein K16053 ybdG; miniconductance mechanosensitive channel
D CI960_19125 mgtE; magnesium transporter K06213 mgtE; magnesium transporter
D CI960_03645 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D CI960_01805 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D CI960_11995 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D CI960_12000 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D CI960_09935 corA; magnesium and cobalt transport protein CorA K03284 corA; magnesium transporter
D CI960_07290 magnesium transporter CorA K03284 corA; magnesium transporter
D CI960_08210 fluoride efflux transporter CrcB K06199 crcB; fluoride exporter
D CI960_13010 cation transporter K08364 merP; periplasmic mercuric ion binding protein
D CI960_08220 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CI960_15065 gliding motility-associated protein GldE K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CI960_04035 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CI960_09700 porin family protein K16079 omp31; outer membrane immunogenic protein
D CI960_07215 OmpA family protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D CI960_08685 hypothetical protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D CI960_15650 hypothetical protein K06076 fadL; long-chain fatty acid transport protein
D CI960_00115 TonB-dependent receptor K16092 btuB; vitamin B12 transporter
D CI960_01695 TonB-dependent receptor K16092 btuB; vitamin B12 transporter
D CI960_19685 TonB-dependent receptor K16092 btuB; vitamin B12 transporter
D CI960_12060 TonB-dependent receptor K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D CI960_22690 SusC/RagA family TonB-linked outer membrane protein K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D CI960_18625 SusC/RagA family TonB-linked outer membrane protein K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D CI960_23040 TonB-dependent receptor K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D CI960_18845 SusC/RagA family TonB-linked outer membrane protein K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D CI960_18865 TonB-dependent receptor K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D CI960_14640 SusC/RagA family TonB-linked outer membrane protein K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D CI960_01515 TonB-dependent receptor K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D CI960_01985 TonB-dependent receptor K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D CI960_06250 SusC/RagA family TonB-linked outer membrane protein K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D CI960_06535 TonB-dependent receptor K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D CI960_06550 TonB-dependent receptor K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D CI960_19960 TonB-dependent receptor K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D CI960_20600 SusC/RagA family TonB-linked outer membrane protein K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D CI960_03545 TonB-dependent receptor K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D CI960_21860 SusC/RagA family TonB-linked outer membrane protein K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D CI960_21885 SusC/RagA family TonB-linked outer membrane protein K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D CI960_00005 TonB-dependent receptor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D CI960_00130 ligand-gated channel protein K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D CI960_00145 TonB-dependent receptor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D CI960_11425 TonB-dependent receptor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D CI960_13015 TonB-dependent receptor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D CI960_00090 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CI960_00770 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CI960_02635 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CI960_08975 TolC family protein K15725 czcC; outer membrane protein, heavy metal efflux system
D CI960_04540 TolC family protein K15725 czcC; outer membrane protein, heavy metal efflux system
D CI960_22770 TolC family protein K12340 tolC; outer membrane protein
D CI960_00980 TolC family protein K12340 tolC; outer membrane protein
D CI960_05235 TolC family protein K12340 tolC; outer membrane protein
D CI960_10715 TolC family protein K12340 tolC; outer membrane protein
D CI960_07370 TolC family protein K12340 tolC; outer membrane protein
D CI960_07875 TolC family protein K12340 tolC; outer membrane protein
D CI960_22645 TolC family protein K12340 tolC; outer membrane protein
D CI960_11705 hypothetical protein K18139 oprM; outer membrane protein, multidrug efflux system
D CI960_04795 hypothetical protein K18139 oprM; outer membrane protein, multidrug efflux system
D CI960_08570 multidrug transporter K18139 oprM; outer membrane protein, multidrug efflux system
D CI960_13125 TolC family protein K18139 oprM; outer membrane protein, multidrug efflux system
D CI960_05615 TolC family protein K18904 nodT; outer membrane protein, multidrug efflux system
D CI960_06685 sugar transporter K01991 wza; polysaccharide biosynthesis/export protein
D CI960_11610 sugar transporter K01991 wza; polysaccharide biosynthesis/export protein
D CI960_03190 BexD/CtrA/VexA family polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D CI960_12910 sugar transporter K01991 wza; polysaccharide biosynthesis/export protein
D CI960_01650 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family
D CI960_09675 outer membrane protein assembly factor BamD K05807 bamD; outer membrane protein assembly factor BamD
D CI960_00410 hypothetical protein K21449 ata; trimeric autotransporter adhesin
D CI960_22565 hypothetical protein K21449 ata; trimeric autotransporter adhesin
D CI960_16710 hypothetical protein K21449 ata; trimeric autotransporter adhesin
D CI960_04030 lptC; LPS export ABC transporter periplasmic protein LptC K11719 lptC; lipopolysaccharide export system protein LptC
D CI960_19130 CidA/LrgA family protein K06518 cidA; holin-like protein
D CI960_12050 MFS transporter K16211 malY; maltose/moltooligosaccharide transporter
D CI960_08305 amino acid permease K20265 gadC; glutamate:GABA antiporter
D CI960_07930 CusA/CzcA family heavy metal efflux RND transporter K15726 czcA; heavy metal efflux system protein
D CI960_04535 CusA/CzcA family heavy metal efflux RND transporter K15726 czcA; heavy metal efflux system protein
D CI960_08985 CusA/CzcA family heavy metal efflux RND transporter K15726 czcA; heavy metal efflux system protein
D CI960_05370 cation transporter K07787 cusA; copper/silver efflux system protein
D CI960_22650 AcrB/AcrD/AcrF family protein K18138 acrB; multidrug efflux pump
D CI960_11710 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D CI960_16840 QacE family quaternary ammonium compound efflux SMR transporter K11741 sugE; quaternary ammonium compound-resistance protein SugE
D CI960_14780 EamA family transporter K08978 TC.BAT1; bacterial/archaeal transporter family protein
D CI960_06375 multidrug DMT transporter permease K05340 glcU; glucose uptake protein
D CI960_10775 L-rhamnose/proton symporter RhaT K02856 rhaT; L-rhamnose-H+ transport protein
D CI960_10845 gluconate transporter K06155 gntT; Gnt-I system high-affinity gluconate transporter
D CI960_21840 gluconate:proton symporter K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D CI960_14990 C4-dicarboxylate ABC transporter K07791 dcuA; anaerobic C4-dicarboxylate transporter DcuA
D CI960_18940 sodium:proton exchanger K07301 yrbG; cation:H+ antiporter
D CI960_06495 sodium:glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family
D CI960_08335 nhaA; Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family
D CI960_19815 sodium:proton antiporter K03315 nhaC; Na+:H+ antiporter, NhaC family
D CI960_19820 nhaC; Na+/H+ antiporter NhaC K03315 nhaC; Na+:H+ antiporter, NhaC family
D CI960_22665 potassium/proton antiporter K11105 cvrA; potassium/hydrogen antiporter
D CI960_00600 sodium:proton antiporter K26735 KEA4_5_6; K+:H+ antiporter
D CI960_22900 sodium:proton antiporter K26735 KEA4_5_6; K+:H+ antiporter
D CI960_12385 sodium:proton antiporter K26735 KEA4_5_6; K+:H+ antiporter
D CI960_08330 sodium:proton antiporter K26730 napA; Na+:H+ antiporter
D CI960_06135 cation:proton antiporter K26730 napA; Na+:H+ antiporter
D CI960_05665 cation/H(+) antiporter K26731 CHX; K+:H+ antiporter
D CI960_19530 potassium transporter K03498 trkH; trk/ktr system potassium uptake protein
D CI960_07820 potassium transporter K03498 trkH; trk/ktr system potassium uptake protein
D CI960_19535 Trk system potassium transporter TrkA K03499 trkA; trk/ktr system potassium uptake protein
D CI960_07815 TrkA family potassium uptake protein K03499 trkA; trk/ktr system potassium uptake protein
D CI960_11760 xanthine permease XanP K16345 xanP; xanthine permease XanP
D CI960_05575 chloride channel protein K03281 clcA; chloride channel protein, CIC family
D CI960_05385 ClC family H(+)/Cl(-) exchange transporter K03281 clcA; chloride channel protein, CIC family
D CI960_22760 chromate transporter K07240 chrA; chromate transporter
D CI960_22765 chromate transporter K07240 chrA; chromate transporter
D CI960_21330 sodium-independent anion transporter K03321 TC.SULP; sulfate permease, SulP family
D CI960_11125 NRAMP family metal ion transporter K03322 mntH; manganese transport protein
D CI960_22025 Na+/Pi-cotransporter K03324 yjbB; phosphate:Na+ symporter
D CI960_06430 hypothetical protein K09125 yhhQ; queuosine precursor transporter
D CI960_00635 MarC family protein K05595 marC; multiple antibiotic resistance protein
D CI960_07585 MarC family protein K05595 marC; multiple antibiotic resistance protein
D CI960_03145 antibiotic resistance protein MarC K05595 marC; multiple antibiotic resistance protein
D CI960_18690 rod shape-determining protein RodA K03588 ftsW; cell division protein FtsW
D CI960_01825 energy transducer TonB K03832 tonB; periplasmic protein TonB
D CI960_22310 energy transducer TonB K03832 tonB; periplasmic protein TonB
D CI960_01900 hypothetical protein K03640 pal; peptidoglycan-associated lipoprotein
D CI960_21110 transporter K03641 tolB; TolB protein
D CI960_02320 sodium-translocating pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D CI960_19650 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D CI960_03915 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D CI960_06290 carboxylase K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D CI960_19640 oxaloacetate decarboxylase K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma
D CI960_03930 methylmalonyl-CoA carboxyltransferase K01604 mmdA; methylmalonyl-CoA decarboxylase subunit alpha [EC:7.2.4.3]
D CI960_07235 methylmalonyl-CoA carboxyltransferase K01604 mmdA; methylmalonyl-CoA decarboxylase subunit alpha [EC:7.2.4.3]
D CI960_03920 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D CI960_07365 HlyD family secretion protein K03543 emrA; membrane fusion protein, multidrug efflux system
D CI960_07935 efflux RND transporter periplasmic adaptor subunit K15727 czcB; membrane fusion protein, heavy metal efflux system
D CI960_04530 efflux RND transporter periplasmic adaptor subunit K15727 czcB; membrane fusion protein, heavy metal efflux system
D CI960_08980 efflux RND transporter periplasmic adaptor subunit K15727 czcB; membrane fusion protein, heavy metal efflux system
D CI960_05360 efflux RND transporter periplasmic adaptor subunit K07798 cusB; membrane fusion protein, copper/silver efflux system
D CI960_10725 efflux RND transporter periplasmic adaptor subunit K18302 mexJ; membrane fusion protein, multidrug efflux system
D CI960_04785 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D CI960_22655 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D CI960_11715 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D CI960_20775 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D CI960_08580 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D CI960_13135 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D CI960_10555 hypothetical protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D CI960_06690 tyrosine protein kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D CI960_11605 tyrosine protein kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D CI960_03195 chromosome partitioning protein ParA K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D CI960_12905 tyrosine protein kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D CI960_04575 RagB/SusD family nutrient uptake outer membrane protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D CI960_04620 RagB/SusD family nutrient uptake outer membrane protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D CI960_04810 RagB/SusD family nutrient uptake outer membrane protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D CI960_17860 RagB/SusD family nutrient uptake outer membrane protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D CI960_22455 RagB/SusD family nutrient uptake outer membrane protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D CI960_00375 RagB/SusD family nutrient uptake outer membrane protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D CI960_09500 RagB/SusD family nutrient uptake outer membrane protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D CI960_22685 RagB/SusD family nutrient uptake outer membrane protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D CI960_18590 RagB/SusD family nutrient uptake outer membrane protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D CI960_18620 RagB/SusD family nutrient uptake outer membrane protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D CI960_23035 RagB/SusD family nutrient uptake outer membrane protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D CI960_00965 RagB/SusD family nutrient uptake outer membrane protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D CI960_01030 RagB/SusD family nutrient uptake outer membrane protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D CI960_01045 RagB/SusD family nutrient uptake outer membrane protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D CI960_18840 RagB/SusD family nutrient uptake outer membrane protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D CI960_18870 RagB/SusD family nutrient uptake outer membrane protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D CI960_14645 RagB/SusD family nutrient uptake outer membrane protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D CI960_14710 RagB/SusD family nutrient uptake outer membrane protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D CI960_01520 RagB/SusD family nutrient uptake outer membrane protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D CI960_01545 RagB/SusD family nutrient uptake outer membrane protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D CI960_01990 RagB/SusD family nutrient uptake outer membrane protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D CI960_06215 RagB/SusD family nutrient uptake outer membrane protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D CI960_06255 RagB/SusD family nutrient uptake outer membrane protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D CI960_10800 RagB/SusD family nutrient uptake outer membrane protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D CI960_06540 RagB/SusD family nutrient uptake outer membrane protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D CI960_06545 RagB/SusD family nutrient uptake outer membrane protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D CI960_19955 RagB/SusD family nutrient uptake outer membrane protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D CI960_02755 RagB/SusD family nutrient uptake outer membrane protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D CI960_03075 RagB/SusD family nutrient uptake outer membrane protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D CI960_11835 RagB/SusD family nutrient uptake outer membrane protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D CI960_20605 RagB/SusD family nutrient uptake outer membrane protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D CI960_12065 RagB/SusD family nutrient uptake outer membrane protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D CI960_20960 SusD family outer membrane lipoprotein NanU K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D CI960_03540 RagB/SusD family nutrient uptake outer membrane protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D CI960_12540 RagB/SusD family nutrient uptake outer membrane protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D CI960_16810 RagB/SusD family nutrient uptake outer membrane protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D CI960_21355 RagB/SusD family nutrient uptake outer membrane protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D CI960_21505 RagB/SusD family nutrient uptake outer membrane protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D CI960_12955 RagB/SusD family nutrient uptake outer membrane protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D CI960_13085 RagB/SusD family nutrient uptake outer membrane protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D CI960_21755 RagB/SusD family nutrient uptake outer membrane protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D CI960_21785 RagB/SusD family nutrient uptake outer membrane protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D CI960_21820 RagB/SusD family nutrient uptake outer membrane protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D CI960_21865 RagB/SusD family nutrient uptake outer membrane protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D CI960_21890 RagB/SusD family nutrient uptake outer membrane protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D CI960_21925 RagB/SusD family nutrient uptake outer membrane protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D CI960_17760 RagB/SusD family nutrient uptake outer membrane protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D CI960_17805 RagB/SusD family nutrient uptake outer membrane protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D CI960_22170 RagB/SusD family nutrient uptake outer membrane protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D CI960_00765 nicotinamide riboside transporter PnuC K03811 pnuC; nicotinamide mononucleotide transporter
D CI960_11515 feoB; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D CI960_09265 methyltransferase K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D CI960_03515 methyltransferase K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
C 02044 Secretion system [BR:parc02044]
D CI960_22770 TolC family protein K12340 tolC; outer membrane protein
D CI960_00980 TolC family protein K12340 tolC; outer membrane protein
D CI960_05235 TolC family protein K12340 tolC; outer membrane protein
D CI960_10715 TolC family protein K12340 tolC; outer membrane protein
D CI960_07370 TolC family protein K12340 tolC; outer membrane protein
D CI960_07875 TolC family protein K12340 tolC; outer membrane protein
D CI960_22645 TolC family protein K12340 tolC; outer membrane protein
D CI960_20690 competence protein ComEA K02237 comEA; competence protein ComEA
D CI960_04155 CMP deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D CI960_06160 competence protein K02238 comEC; competence protein ComEC
D CI960_12585 secA; protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CI960_01155 protein translocase subunit SecDF K12257 secDF; SecD/SecF fusion protein
D CI960_17535 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D CI960_04095 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D CI960_18005 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D CI960_04500 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CI960_08410 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D CI960_14395 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D CI960_12405 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CI960_05490 twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D CI960_05495 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:parc02042]
D CI960_21000 hemolysin K11031 slo; thiol-activated cytolysin
D CI960_21005 hemolysin K11031 slo; thiol-activated cytolysin
D CI960_08220 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CI960_15065 gliding motility-associated protein GldE K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CI960_04035 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CI960_08270 hemolysin III K11068 hlyIII; hemolysin III
D CI960_09425 glycoside hydrolase K01197 hya; hyaluronoglucosaminidase [EC:3.2.1.35]
C 02022 Two-component system [BR:parc02022]
D CI960_18645 sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D CI960_20340 sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D CI960_02850 histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D CI960_01450 sensor histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D CI960_07555 DNA-binding response regulator K07672 trcR; two-component system, OmpR family, response regulator TrcR
D CI960_07955 two-component sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D CI960_02890 hybrid sensor histidine kinase/response regulator K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D CI960_04400 hybrid sensor histidine kinase/response regulator K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D CI960_18445 sensor histidine kinase K13532 kinD; two-component system, sporulation sensor kinase D [EC:2.7.13.3]
D CI960_19680 histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D CI960_07945 DNA-binding response regulator K02477 K02477; two-component system, LytTR family, response regulator
D CI960_12655 DNA-binding response regulator K02477 K02477; two-component system, LytTR family, response regulator
D CI960_17925 DNA-binding response regulator K02477 K02477; two-component system, LytTR family, response regulator
D CI960_18965 DNA-binding response regulator K02477 K02477; two-component system, LytTR family, response regulator
D CI960_17835 DNA-binding response regulator K02477 K02477; two-component system, LytTR family, response regulator
D CI960_22795 DNA-binding response regulator K02477 K02477; two-component system, LytTR family, response regulator
D CI960_12315 DNA-binding response regulator K02477 K02477; two-component system, LytTR family, response regulator
D CI960_02120 sigma-54-dependent Fis family transcriptional regulator K07713 zraR; two-component system, NtrC family, response regulator HydG
D CI960_15475 sigma-54-dependent Fis family transcriptional regulator K07713 zraR; two-component system, NtrC family, response regulator HydG
D CI960_07145 sigma-54-dependent Fis family transcriptional regulator K07713 zraR; two-component system, NtrC family, response regulator HydG
D CI960_04395 sigma-54-dependent Fis family transcriptional regulator K07713 zraR; two-component system, NtrC family, response regulator HydG
D CI960_02855 PAS domain-containing sensor histidine kinase K11383 kinB; two-component system, NtrC family, sensor histidine kinase KinB [EC:2.7.13.3]
D CI960_03685 PAS domain-containing sensor histidine kinase K11383 kinB; two-component system, NtrC family, sensor histidine kinase KinB [EC:2.7.13.3]
D CI960_01080 sensor histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D CI960_01085 sensor histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D CI960_03680 sigma-54-dependent Fis family transcriptional regulator K02481 flgR; two-component system, NtrC family, response regulator
D CI960_16140 hybrid sensor histidine kinase/response regulator K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D CI960_00535 two-component system response regulator K19694 chiS; two-component system, sensor histidine kinase ChiS
D CI960_08670 hybrid sensor histidine kinase/response regulator K19694 chiS; two-component system, sensor histidine kinase ChiS
D CI960_10660 hybrid sensor histidine kinase/response regulator K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D CI960_07565 hybrid sensor histidine kinase/response regulator K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D CI960_12460 hybrid sensor histidine kinase/response regulator K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
C 02035 Bacterial motility proteins [BR:parc02035]
D CI960_11820 glucosaminidase K02395 flgJ; peptidoglycan hydrolase FlgJ
D CI960_03645 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:parc04812]
D CI960_14520 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D CI960_18665 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D CI960_18670 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D CI960_13750 ParA family protein K03496 parA; chromosome partitioning protein
D CI960_18990 ParA family protein K03496 parA; chromosome partitioning protein
D CI960_16095 ParA family protein K03496 parA; chromosome partitioning protein
D CI960_13730 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CI960_18985 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:parc04147]
D CI960_07355 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D CI960_17955 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CI960_23065 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CI960_04855 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CI960_07310 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D CI960_22505 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CI960_10825 peptidase M19 K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D CI960_00855 fused gamma-glutamyl-gamma-aminobutyrate hydrolase/peptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D CI960_03580 peroxiredoxin K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D CI960_02395 groL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CI960_15090 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D CI960_17140 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D CI960_03845 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CI960_21665 S9 family peptidase K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D CI960_17365 S9 family peptidase K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D CI960_17410 S9 family peptidase K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D CI960_01705 S9 family peptidase K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D CI960_19525 gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17]
D CI960_18175 IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D CI960_03560 inosine 5-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D CI960_17545 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D CI960_20020 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D CI960_07015 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CI960_20005 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CI960_03355 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CI960_12365 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CI960_01310 o-succinylbenzoate--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CI960_20110 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D CI960_14590 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D CI960_01600 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CI960_03455 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CI960_19935 glycoside hydrolase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D CI960_06310 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D CI960_05670 1,4-alpha-glucan-branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D CI960_13340 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D CI960_05100 glutamine synthetase type III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CI960_02035 glutamine synthetase type III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CI960_02780 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CI960_08245 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D CI960_22160 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D CI960_12475 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CI960_14525 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CI960_07400 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CI960_21445 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CI960_12700 electron transfer flavoprotein subunit alpha/FixB family protein K03522 fixB; electron transfer flavoprotein alpha subunit
D CI960_07185 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D CI960_19710 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CI960_00620 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D CI960_06920 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D CI960_19355 histidine phosphatase family protein K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D CI960_03705 sugar nucleotide epimerase K03098 APOD; apolipoprotein D and lipocalin family protein
C 02048 Prokaryotic defense system [BR:parc02048]
D CI960_09635 type I-C CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D CI960_12745 subtype II CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D CI960_09640 cas2; CRISPR-associated endonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2
D CI960_12740 cas2; CRISPR-associated endonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2
D CI960_09610 CRISPR-associated helicase/endonuclease Cas3 K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D CI960_09630 cas4; CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D CI960_09620 cas8c; type I-C CRISPR-associated protein Cas8c/Csd1 K19117 csd1; CRISPR-associated protein Csd1
D CI960_09625 cas7c; type I-C CRISPR-associated protein Cas7/Csd2 K19118 csd2; CRISPR-associated protein Csd2
D CI960_09615 cas5c; type I-C CRISPR-associated protein Cas5 K19119 cas5d; CRISPR-associated protein Cas5d
D CI960_12750 cas9; type II CRISPR RNA-guided endonuclease Cas9 K09952 csn1; CRISPR-associated endonuclease Csn1 [EC:3.1.-.-]
D CI960_15455 restriction endonuclease subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D CI960_17100 type I restriction endonuclease subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D CI960_15430 hypothetical protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D CI960_15435 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D CI960_17115 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D CI960_15450 SAM-dependent methyltransferase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D CI960_15955 SAM-dependent DNA methyltransferase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D CI960_17120 SAM-dependent DNA methyltransferase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D CI960_22890 DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D CI960_15510 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D CI960_10090 methyltransferase K07317 K07317; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D CI960_10420 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D CI960_21175 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D CI960_19695 type II toxin-antitoxin system YafQ family toxin K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-]
D CI960_05025 type II toxin-antitoxin system HipA family toxin K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D CI960_16390 type II toxin-antitoxin system HipA family toxin K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D CI960_04820 PspC domain-containing protein K03973 pspC; phage shock protein C
D CI960_01910 type II toxin-antitoxin system RelE/ParE family toxin K19092 parE1_3_4; toxin ParE1/3/4
D CI960_16765 type II toxin-antitoxin system RelE/ParE family toxin K19092 parE1_3_4; toxin ParE1/3/4
D CI960_15440 death-on-curing protein K07341 doc; death on curing protein
D CI960_01360 PIN domain-containing protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D CI960_18665 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D CI960_14520 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D CI960_22230 DNA topoisomerase IV K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D CI960_22745 type IIA DNA topoisomerase subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D CI960_17630 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CI960_15125 hypothetical protein K19171 dndD; DNA sulfur modification protein DndD
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:parc04090]
D CI960_21665 S9 family peptidase K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D CI960_17365 S9 family peptidase K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D CI960_17410 S9 family peptidase K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D CI960_01705 S9 family peptidase K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
C 01504 Antimicrobial resistance genes [BR:parc01504]
D CI960_14120 aminoglycoside 6-adenylyltransferase AadS K05593 aadK; aminoglycoside 6-adenylyltransferase [EC:2.7.7.-]
D CI960_02110 tetracycline resistance ribosomal protection protein Tet(Q) K18220 tetM; ribosomal protection tetracycline resistance protein
D CI960_04405 tetracycline resistance ribosomal protection protein K18220 tetM; ribosomal protection tetracycline resistance protein
D CI960_14115 tetracycline-inactivating monooxygenase Tet(X) K18221 tetX; tetracycline 11a-monooxygenase, tetracycline resistance protein [EC:1.14.13.231]
D CI960_12715 MFS transporter K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein
D CI960_22855 acetyltransferase K18234 vat; virginiamycin A acetyltransferase [EC:2.3.1.-]
D CI960_02790 acetyltransferase K18234 vat; virginiamycin A acetyltransferase [EC:2.3.1.-]
D CI960_02895 acetyltransferase K18234 vat; virginiamycin A acetyltransferase [EC:2.3.1.-]
D CI960_22585 chloramphenicol acetyltransferase K19271 catA; chloramphenicol O-acetyltransferase type A [EC:2.3.1.28]
D CI960_02905 chloramphenicol acetyltransferase K19271 catA; chloramphenicol O-acetyltransferase type A [EC:2.3.1.28]
D CI960_08080 hypothetical protein K02172 blaR1; bla regulator protein blaR1
D CI960_22320 energy transducer TonB K02172 blaR1; bla regulator protein blaR1
D CI960_08075 transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D CI960_22315 transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D CI960_15790 CfxA family class A broad-spectrum beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D CI960_04785 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D CI960_22655 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D CI960_11715 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D CI960_20775 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D CI960_08580 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D CI960_13135 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D CI960_22650 AcrB/AcrD/AcrF family protein K18138 acrB; multidrug efflux pump
D CI960_11710 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D CI960_11705 hypothetical protein K18139 oprM; outer membrane protein, multidrug efflux system
D CI960_04795 hypothetical protein K18139 oprM; outer membrane protein, multidrug efflux system
D CI960_08570 multidrug transporter K18139 oprM; outer membrane protein, multidrug efflux system
D CI960_13125 TolC family protein K18139 oprM; outer membrane protein, multidrug efflux system
D CI960_10725 efflux RND transporter periplasmic adaptor subunit K18302 mexJ; membrane fusion protein, multidrug efflux system
D CI960_22770 TolC family protein K12340 tolC; outer membrane protein
D CI960_00980 TolC family protein K12340 tolC; outer membrane protein
D CI960_05235 TolC family protein K12340 tolC; outer membrane protein
D CI960_10715 TolC family protein K12340 tolC; outer membrane protein
D CI960_07370 TolC family protein K12340 tolC; outer membrane protein
D CI960_07875 TolC family protein K12340 tolC; outer membrane protein
D CI960_22645 TolC family protein K12340 tolC; outer membrane protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins [BR:parc00536]
D CI960_09425 glycoside hydrolase K01197 hya; hyaluronoglucosaminidase [EC:3.2.1.35]
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:parc00537]
D CI960_08245 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D CI960_22160 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D CI960_10825 peptidase M19 K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D CI960_00855 fused gamma-glutamyl-gamma-aminobutyrate hydrolase/peptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D CI960_09425 glycoside hydrolase K01197 hya; hyaluronoglucosaminidase [EC:3.2.1.35]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:parc03100]
D CI960_02465 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CI960_05335 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CI960_13210 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CI960_20550 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CI960_03010 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CI960_03780 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CI960_18460 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CI960_19915 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CI960_01730 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CI960_07335 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CI960_07340 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CI960_12765 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CI960_07330 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CI960_00900 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CI960_01410 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D CI960_01420 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D CI960_01415 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D CI960_11360 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CI960_16500 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CI960_16505 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CI960_13415 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D CI960_13420 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D CI960_21480 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D CI960_14350 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D CI960_14355 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D CI960_00880 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CI960_17700 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CI960_00870 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CI960_01580 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CI960_04115 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CI960_09145 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CI960_01590 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CI960_12570 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CI960_17555 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CI960_04510 tRNA-His K14226 tRNA-His; tRNA His
D CI960_04515 tRNA-His K14226 tRNA-His; tRNA His
D CI960_05330 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CI960_13215 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CI960_20555 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CI960_03005 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CI960_18465 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CI960_19920 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CI960_03775 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CI960_02400 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CI960_09150 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CI960_22530 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CI960_09155 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CI960_01585 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CI960_22215 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CI960_05790 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CI960_22810 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CI960_05785 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CI960_10505 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CI960_00525 tRNA-Met K14230 tRNA-Met; tRNA Met
D CI960_11740 tRNA-Met K14230 tRNA-Met; tRNA Met
D CI960_19995 tRNA-Met K14230 tRNA-Met; tRNA Met
D CI960_05280 tRNA-Met K14230 tRNA-Met; tRNA Met
D CI960_02685 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D CI960_02955 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D CI960_18910 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CI960_05230 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CI960_02680 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CI960_01810 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CI960_05735 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CI960_05795 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CI960_11635 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CI960_13270 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CI960_05730 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CI960_02460 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CI960_09735 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CI960_04000 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CI960_17550 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CI960_17565 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CI960_17540 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D CI960_02665 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D CI960_04120 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D CI960_17560 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D CI960_09740 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D CI960_01750 tRNA-Val K14237 tRNA-Val; tRNA Val
D CI960_01760 tRNA-Val K14237 tRNA-Val; tRNA Val
D CI960_01755 tRNA-Val K14237 tRNA-Val; tRNA Val
D CI960_03000 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CI960_20560 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CI960_03770 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CI960_05325 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CI960_18470 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CI960_19925 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CI960_13220 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CI960_18455 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CI960_20545 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CI960_05340 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CI960_03015 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CI960_03785 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CI960_13205 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CI960_19910 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CI960_03020 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CI960_03790 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CI960_05345 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CI960_13200 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CI960_18450 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CI960_19905 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CI960_20540 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CI960_05295 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA
D CI960_13185 ssrA; transfer-messenger RNA K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D CI960_09655 L-glyceraldehyde 3-phosphate reductase K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-]
D CI960_13260 indolepyruvate ferredoxin oxidoreductase K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8]
D CI960_13255 indolepyruvate oxidoreductase K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8]
D CI960_11460 saccharopine dehydrogenase K27502 capadh; carboxyaminopropylagmatine dehydrogenase [EC:1.5.1.55]
D CI960_10485 flavodoxin family protein K03923 mdaB; NADPH dehydrogenase (quinone) [EC:1.6.5.10]
D CI960_23075 ahpF; alkyl hydroperoxide reductase subunit F K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-]
D CI960_16630 peptide-methionine (R)-S-oxide reductase K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12]
D CI960_08960 cytochrome B6 K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D CI960_08645 cytochrome-c peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D CI960_11465 thioredoxin-dependent thiol peroxidase K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D CI960_12720 lipid hydroperoxide peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D CI960_23070 ahpC; peroxiredoxin K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26]
D CI960_21720 peroxidase K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-]
D CI960_08930 NADP oxidoreductase K17992 hndB; NADP-reducing hydrogenase subunit HndB [EC:1.12.1.3]
D CI960_08945 NAD(P)H-dependent oxidoreductase subunit E K18330 hndA; NADP-reducing hydrogenase subunit HndA [EC:1.12.1.3]
D CI960_08935 NADH-quinone oxidoreductase subunit J/K K18331 hndC; NADP-reducing hydrogenase subunit HndC [EC:1.12.1.3]
D CI960_08940 NADH:ubiquinone oxidoreductase K18332 hndD; NADP-reducing hydrogenase subunit HndD [EC:1.12.1.3]
D CI960_03565 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D CI960_04700 ferritin K02217 ftnA; ferritin [EC:1.16.3.2]
D CI960_00630 ferritin K02217 ftnA; ferritin [EC:1.16.3.2]
D CI960_00640 ferritin K02217 ftnA; ferritin [EC:1.16.3.2]
D CI960_03610 ferritin K02217 ftnA; ferritin [EC:1.16.3.2]
D CI960_01560 ferredoxin-NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D CI960_00120 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D CI960_23055 pflA; pyruvate formate lyase-activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D CI960_14430 glycyl-radical enzyme activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D CI960_07855 glycyl-radical enzyme activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D CI960_17480 acetylornithine carbamoyltransferase K13043 argF; N-succinyl-L-ornithine transcarbamylase [EC:2.1.3.11]
D CI960_08035 GNAT family N-acetyltransferase K22441 paiA; diamine N-acetyltransferase [EC:2.3.1.57]
D CI960_00160 sugar O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D CI960_14435 sugar O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D CI960_17300 sugar O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D CI960_01735 GNAT family N-acetyltransferase K03827 yjaB; putative acetyltransferase [EC:2.3.1.-]
D CI960_22545 GNAT family N-acetyltransferase K03830 yafP; putative acetyltransferase [EC:2.3.1.-]
D CI960_03405 glycosidase K16212 mgp; 4-O-beta-D-mannosyl-D-glucose phosphorylase [EC:2.4.1.281]
D CI960_07120 glycosidase K18785 mp2; beta-1,4-mannooligosaccharide/beta-1,4-mannosyl-N-acetylglucosamine phosphorylase [EC:2.4.1.319 2.4.1.320]
D CI960_22050 glycosyl transferase K22721 CSG1; inositol phosphorylceramide mannosyltransferase catalytic subunit [EC:2.4.1.370]
D CI960_04990 glycosyl transferase K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-]
D CI960_00945 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D CI960_00680 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D CI960_18795 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D CI960_03970 thiamine biosynthesis protein ApbE K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D CI960_15265 ltrA; group II intron reverse transcriptase/maturase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D CI960_22935 TIGR00159 family protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D CI960_13455 sugar transferase K15915 pglC; undecaprenyl phosphate N,N'-diacetylbacillosamine 1-phosphate transferase [EC:2.7.8.36]
D CI960_03390 sialate O-acetylesterase K05970 SIAE; sialate O-acetylesterase [EC:3.1.1.53]
D CI960_20975 sialate O-acetylesterase K05970 SIAE; sialate O-acetylesterase [EC:3.1.1.53]
D CI960_15025 O-acetyl-ADP-ribose deacetylase K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D CI960_19950 carboxylesterase/lipase family protein K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-]
D CI960_22205 thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D CI960_03200 capsular biosynthesis protein K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D CI960_00050 phosphotransferase K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D CI960_17635 HDIG domain-containing protein K07037 pgpH; cyclic-di-AMP phosphodiesterase PgpH [EC:3.1.4.-]
D CI960_11875 MBL fold metallo-hydrolase K25227 sdsA1; linear primary-alkylsulfatase [EC:3.1.6.21]
D CI960_01815 TatD family deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D CI960_21470 hydrolase TatD K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D CI960_02255 lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D CI960_04265 lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D CI960_15975 glycoside hydrolase K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D CI960_00815 alpha-amylase K21575 susA; neopullulanase [EC:3.2.1.135]
D CI960_23000 beta-glycosidase K18577 EBM; mannosylglycoprotein endo-beta-mannosidase [EC:3.2.1.152]
D CI960_21705 alpha-xylosidase K01811 xylS; alpha-D-xyloside xylohydrolase [EC:3.2.1.177]
D CI960_21960 hypothetical protein K21065 E3.2.1.197; beta-1,2-mannosidase [EC:3.2.1.197]
D CI960_21510 hypothetical protein K24289 E3.2.1.214; exo beta-1,2-glucooligosaccharide sophorohydrolase (non-reducing end) [EC:3.2.1.214]
D CI960_19440 DUF1080 domain-containing protein K26288 E3.2.1.218; alpha-3'-ketoglucosidase [EC:3.2.1.218]
D CI960_18575 DUF2961 domain-containing protein K27494 exoMA1; D-arabinan exo alpha-(1,3)/(1,5)-arabinofuranosidase (non-reducing end) [EC:3.2.1.225]
D CI960_04890 N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CI960_14315 N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CI960_01175 N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CI960_06700 N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CI960_20590 N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CI960_03205 N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CI960_12245 N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CI960_08105 N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CI960_07230 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D CI960_21580 polysaccharide deacetylase family protein K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D CI960_07495 RidA family protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D CI960_20620 galactosamine-6-phosphate isomerase K02080 agaI; putative deaminase/isomerase [EC:3.5.99.-]
D CI960_08430 ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D CI960_14600 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D CI960_03395 N-acyl-D-glucosamine 2-epimerase K16213 cbe; cellobiose epimerase [EC:5.1.3.11]
D CI960_20980 mutarotase K17948 nanM; N-acetylneuraminate epimerase [EC:5.1.3.24]
D CI960_17715 sugar phosphate isomerase/epimerase K18910 dpe; D-psicose/D-tagatose/L-ribulose 3-epimerase [EC:5.1.3.30 5.1.3.31]
D CI960_03625 L-rhamnose mutarotase K03534 rhaM; L-rhamnose mutarotase [EC:5.1.3.32]
D CI960_05015 hypothetical protein K17810 asl; D-aspartate ligase [EC:6.3.1.12]
D CI960_03245 carboxylate--amine ligase K17810 asl; D-aspartate ligase [EC:6.3.1.12]
D CI960_18815 UDP-N-acetylmuramate--alanine ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D CI960_12435 Na+-transporting NADH:ubiquinone oxidoreductase subunit D K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D CI960_12430 electron transport complex subunit RsxC K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D CI960_12425 ferredoxin K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D CI960_09340 NADH:ubiquinone reductase (Na(+)-transporting) subunit A K00346 nqrA; Na+-transporting NADH:ubiquinone oxidoreductase subunit A [EC:7.2.1.1]
D CI960_09335 NADH:ubiquinone reductase (Na(+)-transporting) subunit B K00347 nqrB; Na+-transporting NADH:ubiquinone oxidoreductase subunit B [EC:7.2.1.1]
D CI960_09330 nqrC; NADH:ubiquinone reductase (Na(+)-transporting) subunit C K00348 nqrC; Na+-transporting NADH:ubiquinone oxidoreductase subunit C [EC:7.2.1.1]
D CI960_09325 NADH:ubiquinone reductase (Na(+)-transporting) subunit D K00349 nqrD; Na+-transporting NADH:ubiquinone oxidoreductase subunit D [EC:7.2.1.1]
D CI960_09320 nqrE; NADH:ubiquinone reductase (Na(+)-transporting) subunit E K00350 nqrE; Na+-transporting NADH:ubiquinone oxidoreductase subunit E [EC:7.2.1.1]
D CI960_09315 NADH:ubiquinone reductase (Na(+)-transporting) subunit F K00351 nqrF; Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:7.2.1.1]
D CI960_08260 copper-translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D CI960_17390 calcium-translocating P-type ATPase, PMCA-type K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D CI960_04495 cadA; cadmium-translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
C 99981 Carbohydrate metabolism
D CI960_11985 hypothetical protein K04767 acuB; acetoin utilization protein AcuB
D CI960_06850 Fe-S oxidoreductase K18928 lldE; L-lactate dehydrogenase complex protein LldE
D CI960_06855 lactate utilization protein K18929 lldF; L-lactate dehydrogenase complex protein LldF
D CI960_06860 hypothetical protein K00782 lldG; L-lactate dehydrogenase complex protein LldG
C 99982 Energy metabolism
D CI960_17445 ferredoxin K05337 fer; ferredoxin
D CI960_12440 electron transporter RnfG K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D CI960_12445 electron transport complex subunit RsxE K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D CI960_12450 electron transport complex subunit RsxA K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D CI960_00035 flavodoxin FldA K03839 fldA; flavodoxin I
D CI960_07380 flavodoxin K03839 fldA; flavodoxin I
D CI960_09350 4Fe-4S binding protein K02574 napH; ferredoxin-type protein NapH
D CI960_12695 electron transfer flavoprotein subunit beta K03521 fixA; electron transfer flavoprotein beta subunit
D CI960_07175 pyridine nucleotide-disulfide oxidoreductase K21739 rclA; probable pyridine nucleotide-disulfide oxidoreductase
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D CI960_12280 YggS family pyridoxal phosphate enzyme K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D CI960_19115 lysylphosphatidylglycerol synthetase family protein K07027 K07027; glycosyltransferase 2 family protein
C 99987 Cofactor metabolism
C 99988 Secondary metabolism
C 99999 Others
D CI960_01745 DoxX family protein K15977 K15977; putative oxidoreductase
D CI960_13280 CoA ligase K09181 yfiQ; acetyltransferase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D CI960_11050 RNA-binding transcriptional accessory protein K06959 tex; protein Tex
C 99974 Translation
C 99975 Protein processing
D CI960_01690 META domain-containing protein K03668 hslJ; heat shock protein HslJ
D CI960_18195 tig; trigger factor K03545 tig; trigger factor
D CI960_12975 SsrA-binding protein K03664 smpB; SsrA-binding protein
D CI960_13300 HypC/HybG/HupF family hydrogenase formation chaperone K04653 hypC; hydrogenase expression/formation protein HypC
D CI960_13305 hydrogenase formation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD
D CI960_13310 hypE; hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE
D CI960_13295 hypF; carbamoyltransferase HypF K04656 hypF; hydrogenase maturation protein HypF
D CI960_20245 magnesium chelatase K07391 comM; magnesium chelatase family protein
D CI960_11870 osmotically inducible protein OsmC K07397 yhfA; putative redox protein
D CI960_12375 serine protease K07403 nfeD; membrane-bound serine protease (ClpP class)
C 99976 Replication and repair
D CI960_16615 cysteine methyltransferase K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein
D CI960_19145 hypothetical protein K03630 radC; DNA repair protein RadC
D CI960_12725 DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC
D CI960_19025 endonuclease K07460 yraN; putative endonuclease
D CI960_22210 dprA; DNA-protecting protein DprA K04096 smf; DNA processing protein
D CI960_12485 replication-associated recombination protein A K07478 ycaJ; putative ATPase
D CI960_07030 helix-turn-helix domain-containing protein K07483 K07483; transposase
D CI960_06115 helix-turn-helix domain-containing protein K07483 K07483; transposase
D CI960_12760 transposase K07483 K07483; transposase
D CI960_15575 IS66 family insertion sequence hypothetical protein K07484 K07484; transposase
D CI960_15580 IS66 family transposase ISBf10 K07484 K07484; transposase
D CI960_16245 IS66 family insertion sequence hypothetical protein K07484 K07484; transposase
D CI960_16250 IS66 family transposase ISBf10 K07484 K07484; transposase
D CI960_10065 hypothetical protein K07497 K07497; putative transposase
D CI960_06120 hypothetical protein K07497 K07497; putative transposase
D CI960_07035 IS3 family transposase K07497 K07497; putative transposase
D CI960_12755 hypothetical protein K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D CI960_03400 MFS transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D CI960_09110 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D CI960_05185 AcrB/AcrD/AcrF family protein K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D CI960_14660 MFS transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D CI960_11030 sodium:solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D CI960_20685 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D CI960_20710 alanine:cation symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D CI960_04635 transporter K03453 TC.BASS; bile acid:Na+ symporter, BASS family
D CI960_13385 Na+ dependent nucleoside transporter K03317 TC.CNT; concentrative nucleoside transporter, CNT family
D CI960_00180 transporter K07085 K07085; putative transport protein
D CI960_09075 aspT; aspartate-alanine antiporter K07085 K07085; putative transport protein
D CI960_05540 transporter K07085 K07085; putative transport protein
D CI960_14790 transporter K07085 K07085; putative transport protein
C 99978 Cell growth
D CI960_19190 cation-binding protein K07322 ytfE; regulator of cell morphogenesis and NO signaling
D CI960_08155 hypothetical protein K06320 cgeB; spore maturation protein CgeB
D CI960_22145 peptidase M24 K22719 envC; murein hydrolase activator
C 99993 Cell motility
C 99995 Signaling proteins
D CI960_20080 typA; translational GTPase TypA K06207 typA; GTP-binding protein
D CI960_15035 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D CI960_07770 ribonuclease K07175 phoH2; PhoH-like ATPase
C 99992 Structural proteins
D CI960_01655 hypothetical protein K06142 hlpA; outer membrane protein
D CI960_01660 hypothetical protein K06142 hlpA; outer membrane protein
D CI960_16880 hypothetical protein K06142 hlpA; outer membrane protein
D CI960_11940 hemolysin secretion protein D K01993 ABC-2.TX; HlyD family secretion protein
D CI960_03810 hemolysin secretion protein D K01993 ABC-2.TX; HlyD family secretion protein
D CI960_22775 efflux RND transporter periplasmic adaptor subunit K02005 ABC.CD.TX; HlyD family secretion protein
D CI960_05240 efflux transporter periplasmic adaptor subunit K02005 ABC.CD.TX; HlyD family secretion protein
D CI960_00985 efflux RND transporter periplasmic adaptor subunit K02005 ABC.CD.TX; HlyD family secretion protein
D CI960_14965 HlyD family secretion protein K02005 ABC.CD.TX; HlyD family secretion protein
D CI960_12070 DUF5116 domain-containing protein K21571 susE_F; starch-binding outer membrane protein SusE/F
C 99994 Others
D CI960_18335 phoU; phosphate transport system regulatory protein PhoU K02039 phoU; phosphate transport system protein
D CI960_04775 copper homeostasis protein CutC K06201 cutC; copper homeostasis protein
D CI960_19215 peptidase M75 K07231 K07231; putative iron-regulated protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D CI960_00790 CvpA family protein K03558 cvpA; membrane protein required for colicin V production
D CI960_11915 phosphatase K04477 ycdX; putative hydrolase
D CI960_22340 patatin K07001 K07001; NTE family protein
D CI960_02325 phospholipase K07001 K07001; NTE family protein
D CI960_07345 patatin K07001 K07001; NTE family protein
D CI960_00155 HAD family phosphatase K07025 K07025; putative hydrolase of the HAD superfamily
D CI960_09785 HAD family hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D CI960_18790 noncanonical pyrimidine nucleotidase, YjjG family K07025 K07025; putative hydrolase of the HAD superfamily
D CI960_00795 Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D CI960_00805 sufD; Fe-S cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D CI960_05290 YihY/virulence factor BrkB family protein K07058 K07058; membrane protein
D CI960_00845 Fe-S metabolism protein SufE K02426 sufE; cysteine desulfuration protein SufE
D CI960_08955 LemA family protein K03744 lemA; LemA protein
D CI960_02335 hypothetical protein K03975 dedA; membrane-associated protein
D CI960_11140 DUF368 domain-containing protein K08974 K08974; putative membrane protein
D CI960_14715 DUF417 domain-containing protein K21741 rclC; reactive chlorine resistance protein C
C 99997 Function unknown
D CI960_01460 radical SAM/SPASM domain-containing protein K06871 K06871; uncharacterized protein
D CI960_20860 radical SAM peptide maturase K06871 K06871; uncharacterized protein
D CI960_20915 radical SAM/SPASM domain-containing protein K06871 K06871; uncharacterized protein
D CI960_08285 anaerobic sulfatase maturase K06871 K06871; uncharacterized protein
D CI960_22075 radical SAM peptide maturase K06871 K06871; uncharacterized protein
D CI960_08950 hypothetical protein K06872 K06872; uncharacterized protein
D CI960_04580 alpha/beta hydrolase K06889 K06889; uncharacterized protein
D CI960_08615 alpha/beta hydrolase K06889 K06889; uncharacterized protein
D CI960_18520 baseplate assembly protein K06903 W; Bacteriophage baseplate protein W
D CI960_13740 ATPase K06921 K06921; uncharacterized protein
D CI960_13100 MarR family transcriptional regulator K06921 K06921; uncharacterized protein
D CI960_01710 phosphohydrolase K06950 K06950; uncharacterized protein
D CI960_02375 hypothetical protein K06973 K06973; uncharacterized protein
D CI960_16655 N-acetyltransferase K06975 K06975; uncharacterized protein
D CI960_21570 N-acetyltransferase K06975 K06975; uncharacterized protein
D CI960_02705 VOC family protein K06996 K06996; uncharacterized protein
D CI960_03575 5-nitroimidazole antibiotic resistance protein K07005 K07005; uncharacterized protein
D CI960_21635 pyridoxamine 5'-phosphate oxidase family protein K07005 K07005; uncharacterized protein
D CI960_17255 TIGR01777 family protein K07071 K07071; uncharacterized protein
D CI960_14535 nucleotidyltransferase K07075 K07075; uncharacterized protein
D CI960_12210 nucleotidyltransferase K07075 K07075; uncharacterized protein
D CI960_17230 HEPN domain-containing protein K07076 K07076; uncharacterized protein
D CI960_07405 nitroreductase family protein K07078 K07078; uncharacterized protein
D CI960_13055 aldo/keto reductase K07079 K07079; uncharacterized protein
D CI960_13060 aldo/keto reductase K07079 K07079; uncharacterized protein
D CI960_17350 phosphodiesterase K07095 K07095; uncharacterized protein
D CI960_01435 metallophosphatase K07098 K07098; uncharacterized protein
D CI960_01440 metallophosphatase K07098 K07098; uncharacterized protein
D CI960_05170 oxidoreductase K07124 K07124; uncharacterized protein
D CI960_00290 AAA family ATPase K07133 K07133; uncharacterized protein
D CI960_05420 AAA family ATPase K07133 K07133; uncharacterized protein
D CI960_18895 AAA family ATPase K07133 K07133; uncharacterized protein
D CI960_02135 ATPase K07133 K07133; uncharacterized protein
D CI960_06825 AAA family ATPase K07133 K07133; uncharacterized protein
D CI960_20055 AAA family ATPase K07133 K07133; uncharacterized protein
D CI960_16305 ATPase K07133 K07133; uncharacterized protein
D CI960_17035 AAA family ATPase K07133 K07133; uncharacterized protein
D CI960_05520 FAD-binding protein K07137 K07137; uncharacterized protein
D CI960_05260 DUF362 domain-containing protein K07138 K07138; uncharacterized protein
D CI960_17040 4Fe-4S ferredoxin K07138 K07138; uncharacterized protein
D CI960_17370 TIGR01212 family radical SAM protein K07139 K07139; uncharacterized protein
D CI960_22600 DUF418 domain-containing protein K07148 K07148; uncharacterized protein
D CI960_07140 hypothetical protein K07148 K07148; uncharacterized protein
D CI960_21845 DUF418 domain-containing protein K07148 K07148; uncharacterized protein
D CI960_11200 hypothetical protein K07164 K07164; uncharacterized protein
D CI960_21465 membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein
D CI960_13380 hypothetical protein K08999 K08999; uncharacterized protein
D CI960_18660 glutamyl-tRNA amidotransferase K09117 K09117; uncharacterized protein
D CI960_08195 HEPN domain-containing protein K09132 K09132; uncharacterized protein
D CI960_17200 nuclease K09384 K09384; uncharacterized protein
D CI960_17450 DUF1349 domain-containing protein K09702 K09702; uncharacterized protein
D CI960_05310 metal-independent alpha-mannosidase K09704 K09704; uncharacterized protein
D CI960_05585 DUF454 domain-containing protein K09790 K09790; uncharacterized protein
D CI960_05620 DUF456 domain-containing protein K09793 K09793; uncharacterized protein
D CI960_16065 SIMPL domain-containing protein K09807 K09807; uncharacterized protein
D CI960_11615 GntR family transcriptional regulator K00243 K00243; uncharacterized protein
D CI960_09845 hypothetical protein K09861 K09861; uncharacterized protein
D CI960_16995 hypothetical protein K09922 K09922; uncharacterized protein
D CI960_22675 glycoside hydrolase family 127 protein K09955 K09955; uncharacterized protein
D CI960_05550 trehalose utilization K09992 K09992; uncharacterized protein
D CI960_07165 DUF2156 domain-containing protein K01163 K01163; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 31, 2024