+D GENES KO
#
KEGG Orthology (KO) - Riemerella anatipestifer ATCC 11845 = DSM 15868
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:ran00010]
D Riean_1552 Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D Riean_1346 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D Riean_0764 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Riean_0595 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Riean_0618 D-fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D Riean_0927 fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Riean_0266 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Riean_0594 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Riean_1089 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D Riean_0163 phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D Riean_0874 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Riean_0978 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Riean_1741 pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D Riean_0589 Pyruvate dehydrogenase (acetyl-transferring) K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D Riean_1740 catalytic domain-containing protein of components of various dehydrogenase complexes K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D Riean_0665 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Riean_0476 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Riean_1036 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Riean_0309 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Riean_0682 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D Riean_1106 phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
C 00020 Citrate cycle (TCA cycle) [PATH:ran00020]
D Riean_0875 citrate synthase I K01647 CS; citrate synthase [EC:2.3.3.1]
D Riean_1795 aconitase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D Riean_0199 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D Riean_0412 2-oxoglutarate dehydrogenase, E1 subunit K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D Riean_0411 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D Riean_0335 catalytic domain-containing protein of components of various dehydrogenase complexes K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D Riean_0665 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Riean_0476 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Riean_0610 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D Riean_1571 succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D Riean_0784 succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D Riean_0783 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D Riean_0785 succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D Riean_1373 fumarase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D Riean_0627 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D Riean_1106 phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D Riean_1741 pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D Riean_0589 Pyruvate dehydrogenase (acetyl-transferring) K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D Riean_1740 catalytic domain-containing protein of components of various dehydrogenase complexes K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:ran00030]
D Riean_0764 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Riean_0675 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D Riean_0363 Transketolase domain-containing protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Riean_0370 Transketolase central region K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Riean_0060 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D Riean_1170 sugar-phosphate isomerase, RpiB/LacA/LacB family K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D Riean_1739 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D Riean_0689 PfkB domain protein K00852 rbsK; ribokinase [EC:2.7.1.15]
D Riean_0682 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D Riean_1258 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D Riean_0927 fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Riean_0618 D-fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D Riean_0595 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:ran00040]
D Riean_1488 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D Riean_0675 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
C 00051 Fructose and mannose metabolism [PATH:ran00051]
D Riean_0992 mannose-6-phosphate isomerase, type 2 K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D Riean_1111 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01840 manB; phosphomannomutase [EC:5.4.2.8]
D Riean_1261 mannose-1-phosphate guanylyltransferase (GDP) K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D Riean_1423 Pyridoxal 4-dehydrogenase K00064 E1.1.1.122; D-threo-aldose 1-dehydrogenase [EC:1.1.1.122]
D Riean_0595 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Riean_0618 D-fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D Riean_0927 fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Riean_0266 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Riean_1170 sugar-phosphate isomerase, RpiB/LacA/LacB family K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
C 00052 Galactose metabolism [PATH:ran00052]
D Riean_0384 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Riean_0682 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D Riean_1552 Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D Riean_1346 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D Riean_1436 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D Riean_0595 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00053 Ascorbate and aldarate metabolism [PATH:ran00053]
D Riean_1488 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D Riean_1423 Pyridoxal 4-dehydrogenase K00064 E1.1.1.122; D-threo-aldose 1-dehydrogenase [EC:1.1.1.122]
D Riean_1341 NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D Riean_1036 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00500 Starch and sucrose metabolism [PATH:ran00500]
D Riean_1641 Starch synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D Riean_0026 Glycoside hydrolase 97 K21574 susB; glucan 1,4-alpha-glucosidase [EC:3.2.1.3]
D Riean_0682 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D Riean_1552 Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D Riean_1346 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D Riean_0764 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:ran00520]
D Riean_1456 glycoside hydrolase family 3 domain protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D Riean_1643 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Riean_0263 protein of unknown function UPF0075 K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D Riean_1410 aminoglycoside phosphotransferase K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221]
D Riean_1337 Nucleotidyl transferase K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99]
D Riean_1148 UDP-N-acetylglucosamine1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Riean_1155 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D Riean_1174 oxidoreductase domain protein K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335]
D Riean_0385 DegT/DnrJ/EryC1/StrS aminotransferase K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
D Riean_0758 NAD-dependent epimerase/dehydratase K02473 wbpP; UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine 4-epimerase [EC:5.1.3.7 5.1.3.-]
D Riean_0757 nucleotide sugar dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D Riean_1552 Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D Riean_1346 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D Riean_0682 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D Riean_1488 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D Riean_0384 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Riean_1436 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D Riean_1341 NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D Riean_0764 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Riean_0992 mannose-6-phosphate isomerase, type 2 K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D Riean_1111 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01840 manB; phosphomannomutase [EC:5.4.2.8]
D Riean_1261 mannose-1-phosphate guanylyltransferase (GDP) K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
C 00620 Pyruvate metabolism [PATH:ran00620]
D Riean_0309 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Riean_1741 pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D Riean_0589 Pyruvate dehydrogenase (acetyl-transferring) K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D Riean_1740 catalytic domain-containing protein of components of various dehydrogenase complexes K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D Riean_0665 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Riean_0476 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Riean_0978 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Riean_0844 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D Riean_1000 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D Riean_0999 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Riean_0926 acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D Riean_1036 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Riean_1156 hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D Riean_1313 Rhodanese domain protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D Riean_0767 ThiJ/PfpI domain-containing protein K05523 hchA; D-lactate dehydratase / protein deglycase [EC:4.2.1.130 3.5.1.124]
D Riean_1470 allosteric NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D Riean_0627 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D Riean_1373 fumarase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D Riean_0331 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D Riean_1106 phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D Riean_0693 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:ran00630]
D Riean_0309 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Riean_0627 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D Riean_0875 citrate synthase I K01647 CS; citrate synthase [EC:2.3.3.1]
D Riean_1795 aconitase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D Riean_0693 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Riean_1424 Catalase K03781 katE; catalase [EC:1.11.1.6]
D Riean_0041 Catalase K03781 katE; catalase [EC:1.11.1.6]
D Riean_1275 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Riean_0763 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Riean_0705 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D Riean_0162 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Riean_0665 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Riean_0476 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Riean_1531 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00640 Propanoate metabolism [PATH:ran00640]
D Riean_0309 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Riean_0386 Transketolase domain-containing protein K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D Riean_0665 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Riean_0476 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Riean_0844 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D Riean_1000 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D Riean_0999 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Riean_0926 acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D Riean_1571 succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D Riean_0610 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D Riean_0396 iron-containing alcohol dehydrogenase K08325 yqhD; NADP-dependent alcohol dehydrogenase [EC:1.1.-.-]
C 00650 Butanoate metabolism [PATH:ran00650]
D Riean_0693 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Riean_0246 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D Riean_0064 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D Riean_1422 Enoyl-CoA hydratase/isomerase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D Riean_0784 succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D Riean_0783 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D Riean_0785 succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D Riean_0977 Aldehyde Dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Riean_1376 Hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D Riean_0329 3-oxoacid CoA-transferase, A subunit K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D Riean_0330 3-oxoacid CoA-transferase, B subunit K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
C 00660 C5-Branched dibasic acid metabolism
D Riean_1571 succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D Riean_0610 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
C 00562 Inositol phosphate metabolism [PATH:ran00562]
D Riean_1480 3-phytase K01083 E3.1.3.8; 3-phytase [EC:3.1.3.8]
D Riean_0266 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:ran00190]
D Riean_0723 NADH dehydrogenase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D Riean_0722 NADH dehydrogenase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D Riean_0721 NADH dehydrogenase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D Riean_0720 NADH dehydrogenase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D Riean_0719 NADH dehydrogenase subunit E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D Riean_0718 NADH dehydrogenase subunit F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D Riean_0716 NADH dehydrogenase subunit G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D Riean_0715 NADH dehydrogenase subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D Riean_0714 NADH dehydrogenase subunit I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D Riean_0713 NADH dehydrogenase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D Riean_0712 NADH dehydrogenase subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D Riean_0711 NADH dehydrogenase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D Riean_0710 NADH dehydrogenase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D Riean_0410 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D Riean_0784 succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D Riean_0783 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D Riean_0785 succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D Riean_1494 cytochrome c oxidase, cbb3-type, subunit I K15862 ccoNO; cytochrome c oxidase cbb3-type subunit I/II [EC:7.1.1.9]
D Riean_1493 hypothetical protein K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D Riean_1492 cytochrome c class I K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D Riean_1676 cytochrome c class I K08738 CYC; cytochrome c
D Riean_0290 cytochrome c class I K08738 CYC; cytochrome c
D Riean_0417 ATP synthase F1 subcomplex alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D Riean_1705 ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D Riean_0416 ATP synthase F1 subcomplex gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D Riean_0418 ATP synthase F1 subcomplex delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D Riean_1706 ATPase, F1 complex, delta/epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D Riean_0421 ATP synthase F0 subcomplex A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D Riean_0419 ATP synthase F0 subcomplex B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D Riean_0420 ATP synthase F0 subcomplex C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D Riean_0516 Inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D Riean_0560 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D Riean_0478 protein of unknown function DUF344 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D Riean_0477 protein of unknown function DUF344 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:ran00680]
D Riean_0763 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Riean_0874 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Riean_0331 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D Riean_0627 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D Riean_0927 fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Riean_0618 D-fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D Riean_0595 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Riean_0988 protein of unknown function DUF224 cysteine-rich region domain protein K08264 hdrD; heterodisulfide reductase subunit D [EC:1.8.98.1]
D Riean_0309 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Riean_0163 phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D Riean_0149 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Riean_1573 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Riean_0150 Phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00910 Nitrogen metabolism [PATH:ran00910]
D Riean_0937 respiratory nitrite reductase (cytochrome; ammonia-forming) precursor K03385 nrfA; nitrite reductase (cytochrome c-552) [EC:1.7.2.2]
D Riean_0938 respiratory nitrite reductase specific menaquinol--cytochrome-c reductase (NrfH) precursor K15876 nrfH; cytochrome c nitrite reductase small subunit
D Riean_1674 nitrous oxide reductase apoprotein K00376 nosZ; nitrous-oxide reductase [EC:1.7.2.4]
D Riean_0826 glutamate dehydrogenase (NAD) K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D Riean_1275 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Riean_0855 Carbonate dehydratase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:ran00920]
D Riean_R0027 phosphoesterase RecJ domain protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D Riean_1684 flavodoxin/nitric oxide synthase K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D Riean_1628 Serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Riean_0856 transferase hexapeptide repeat containing protein K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Riean_1629 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D Riean_1578 Homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D Riean_1576 Cys/Met metabolism pyridoxal-phosphate-dependent protein K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:ran00061]
D Riean_0844 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D Riean_1000 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D Riean_0999 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Riean_0926 acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D Riean_0741 acyl carrier protein K02078 acpP; acyl carrier protein
D Riean_0982 acyl carrier protein K02078 acpP; acyl carrier protein
D Riean_1308 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D Riean_0744 Beta-ketoacyl-acyl-carrier-protein synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D Riean_0056 Beta-ketoacyl-acyl-carrier-protein synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D Riean_0981 3-oxoacyl-(acyl-carrier-protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Riean_1783 Beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Riean_1164 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Riean_0614 3-hydroxyacyl-(acyl-carrier-protein) dehydratase K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59]
D Riean_0061 Enoyl-(acyl-carrier-protein) reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D Riean_0796 2-nitropropane dioxygenase NPD K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D Riean_0398 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Riean_0642 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:ran00071]
D Riean_0693 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Riean_0065 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D Riean_0064 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D Riean_0327 acyl-CoA dehydrogenase domain-containing protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D Riean_0398 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Riean_0642 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Riean_1036 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:ran00561]
D Riean_1036 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Riean_1463 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 00564 Glycerophospholipid metabolism [PATH:ran00564]
D Riean_1586 NAD-dependent glycerol-3-phosphate dehydrogenase domain protein K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D Riean_1463 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D Riean_1066 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D Riean_0549 CDP-alcohol phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D Riean_1065 phosphatidylserine decarboxylase related protein K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism [PATH:ran00592]
D Riean_0065 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:ran00230]
D Riean_0682 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D Riean_1258 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D Riean_0250 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D Riean_0145 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D Riean_0191 formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D Riean_0248 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D Riean_0190 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D Riean_0645 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D Riean_0646 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D Riean_0249 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D Riean_0391 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D Riean_0282 IMP cyclohydrolase; phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D Riean_1202 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D Riean_0428 metallophosphoesterase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D Riean_1178 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D Riean_0659 purine nucleoside phosphorylase I, inosine and guanosine-specific K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D Riean_0076 hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D Riean_1474 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D Riean_1707 Nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D Riean_0073 non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D Riean_0146 GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D Riean_1528 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D Riean_0821 ribonucleoside-diphosphate reductase, alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Riean_0822 ribonucleotide reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D Riean_0156 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D Riean_0227 (p)ppGpp synthetase I, SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D Riean_0559 Ppx/GppA phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D Riean_0255 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D Riean_0136 deoxynucleoside kinase K15519 dck; deoxyadenosine/deoxycytidine kinase [EC:2.7.1.76 2.7.1.74]
D Riean_1091 adenosine deaminase K21053 ade; adenine deaminase [EC:3.5.4.2]
D Riean_0077 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D Riean_1137 hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
D Riean_0369 hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
D Riean_0115 hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
D Riean_0918 urease, alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D Riean_0919 urease, beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5]
D Riean_0920 urease, gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00240 Pyrimidine metabolism [PATH:ran00240]
D Riean_0443 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D Riean_0446 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D Riean_0447 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D Riean_0863 dihydroorotase, multifunctional complex type K01465 URA4; dihydroorotase [EC:3.5.2.3]
D Riean_1506 dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D Riean_0187 orotidine 5'-phosphate decarboxylase K13421 UMPS; uridine monophosphate synthetase [EC:2.4.2.10 4.1.1.23]
D Riean_1992 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D Riean_1707 Nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D Riean_0908 maf protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D Riean_0780 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D Riean_0525 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D Riean_0260 uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D Riean_0428 metallophosphoesterase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D Riean_1178 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D Riean_0219 purine or other phosphorylase family 1 K00757 udp; uridine phosphorylase [EC:2.4.2.3]
D Riean_1525 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D Riean_0344 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D Riean_0821 ribonucleoside-diphosphate reductase, alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Riean_0822 ribonucleotide reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D Riean_0136 deoxynucleoside kinase K15519 dck; deoxyadenosine/deoxycytidine kinase [EC:2.7.1.76 2.7.1.74]
D Riean_1421 CMP/dCMP deaminase zinc-binding protein K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D Riean_1161 Thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D Riean_0607 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:ran00250]
D Riean_0681 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Riean_0108 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Riean_1125 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Riean_0448 1-alkyl-2-acetylglycerophosphocholine esterase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D Riean_0749 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D Riean_0193 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D Riean_1250 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K13566 NIT2; omega-amidase [EC:3.5.1.3]
D Riean_1880 Alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D Riean_0255 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D Riean_0391 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D Riean_0447 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D Riean_0977 Aldehyde Dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Riean_0826 glutamate dehydrogenase (NAD) K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D Riean_0695 delta-1-pyrroline-5-carboxylate dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]
D Riean_1275 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Riean_0443 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D Riean_0446 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D Riean_1643 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Riean_0250 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:ran00260]
D Riean_0619 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Riean_1577 Homoserine dehydrogenase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D Riean_1072 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Riean_0763 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Riean_0163 phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D Riean_0149 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Riean_1573 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Riean_0150 Phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D Riean_0469 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D Riean_0499 8-amino-7-oxononanoate synthase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D Riean_0705 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D Riean_0162 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Riean_0665 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Riean_0476 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Riean_1531 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D Riean_0549 CDP-alcohol phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D Riean_0472 Pyridoxal-5'-phosphate-dependent protein beta subunit K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D Riean_1690 L-serine dehydratase 1 K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D Riean_0232 tryptophan synthase, alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D Riean_0234 tryptophan synthase, beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:ran00270]
D Riean_1628 Serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Riean_0856 transferase hexapeptide repeat containing protein K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Riean_1629 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D Riean_0472 Pyridoxal-5'-phosphate-dependent protein beta subunit K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D Riean_1780 homocysteine S-methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Riean_1781 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Riean_0510 methionine synthase (B12-independent) K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D Riean_1426 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D Riean_1667 methylthioadenosine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D Riean_1722 putative GAF sensor protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D Riean_1716 1-aminocyclopropane-1-carboxylate deaminase K01505 E3.5.99.7; 1-aminocyclopropane-1-carboxylate deaminase [EC:3.5.99.7]
D Riean_0619 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Riean_1577 Homoserine dehydrogenase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D Riean_1072 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Riean_1578 Homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D Riean_1576 Cys/Met metabolism pyridoxal-phosphate-dependent protein K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D Riean_1708 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Riean_0681 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Riean_0108 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Riean_1125 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Riean_0627 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D Riean_1690 L-serine dehydratase 1 K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D Riean_0149 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Riean_1573 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Riean_0150 Phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:ran00280]
D Riean_1708 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Riean_0386 Transketolase domain-containing protein K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D Riean_0665 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Riean_0476 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Riean_0065 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D Riean_1036 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Riean_0788 Methylcrotonoyl-CoA carboxylase K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]
D Riean_1376 Hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D Riean_0329 3-oxoacid CoA-transferase, A subunit K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D Riean_0330 3-oxoacid CoA-transferase, B subunit K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D Riean_0693 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:ran00290]
D Riean_1708 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00300 Lysine biosynthesis [PATH:ran00300]
D Riean_0619 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Riean_1577 Homoserine dehydrogenase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D Riean_1072 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Riean_0023 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D Riean_0123 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D Riean_0140 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D Riean_1619 aminotransferase class-III K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D Riean_0433 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D Riean_1021 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D Riean_1045 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D Riean_0092 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diamin opimelate/D-alanyl-D-alanylligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D Riean_1160 alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10]
C 00310 Lysine degradation [PATH:ran00310]
D Riean_0411 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D Riean_0335 catalytic domain-containing protein of components of various dehydrogenase complexes K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D Riean_0665 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Riean_0476 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Riean_0327 acyl-CoA dehydrogenase domain-containing protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D Riean_0693 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Riean_0977 Aldehyde Dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Riean_1036 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:ran00220]
D Riean_0918 urease, alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D Riean_0919 urease, beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5]
D Riean_0920 urease, gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D Riean_1275 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Riean_0826 glutamate dehydrogenase (NAD) K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D Riean_0681 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Riean_0108 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Riean_1125 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Riean_1619 aminotransferase class-III K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:ran00330]
D Riean_1700 Orn/DAP/Arg decarboxylase 2 K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D Riean_1701 agmatinase K01480 speB; agmatinase [EC:3.5.3.11]
D Riean_1036 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Riean_0998 ornithine aminotransferase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D Riean_1779 Proline dehydrogenase K00318 PRODH; proline dehydrogenase [EC:1.5.5.2]
D Riean_0695 delta-1-pyrroline-5-carboxylate dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]
D Riean_0340 alpha/beta hydrolase fold protein K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D Riean_0681 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Riean_0108 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Riean_1125 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism
D Riean_1036 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00350 Tyrosine metabolism [PATH:ran00350]
D Riean_0681 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Riean_0108 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Riean_1125 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Riean_0661 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D Riean_1546 homogentisate 12-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D Riean_0663 fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D Riean_0977 Aldehyde Dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00360 Phenylalanine metabolism [PATH:ran00360]
D Riean_0438 oxidoreductase FAD/NAD(P)-binding domain protein K02613 paaE; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE
D Riean_1526 Enoyl-CoA hydratase/isomerase K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D Riean_0246 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D Riean_0681 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Riean_0108 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Riean_1125 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Riean_0661 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D Riean_1381 catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21]
D Riean_1050 alpha/beta hydrolase fold protein K05714 mhpC; 2-hydroxy-6-oxonona-2,4-dienedioate hydrolase [EC:3.7.1.14]
C 00380 Tryptophan metabolism [PATH:ran00380]
D Riean_0411 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D Riean_0335 catalytic domain-containing protein of components of various dehydrogenase complexes K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D Riean_0665 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Riean_0476 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Riean_0327 acyl-CoA dehydrogenase domain-containing protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D Riean_0693 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Riean_1036 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Riean_1424 Catalase K03781 katE; catalase [EC:1.11.1.6]
D Riean_0041 Catalase K03781 katE; catalase [EC:1.11.1.6]
D Riean_1381 catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:ran00400]
D Riean_1777 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D Riean_1184 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D Riean_0493 Shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D Riean_0769 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D Riean_0535 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D Riean_0240 Chorismate binding protein K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D Riean_0239 anthranilate synthase, component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D Riean_0238 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D Riean_0235 Phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D Riean_0236 Indole-3-glycerol-phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D Riean_0232 tryptophan synthase, alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D Riean_0234 tryptophan synthase, beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D Riean_0514 DAHP synthetase I/KDSA K04516 AROA1; chorismate mutase [EC:5.4.99.5]
D Riean_1878 Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D Riean_0357 Prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D Riean_0681 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Riean_0108 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Riean_1125 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:ran00410]
D Riean_0528 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D Riean_1036 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Riean_1640 pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
C 00430 Taurine and hypotaurine metabolism [PATH:ran00430]
D Riean_0229 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Riean_1880 Alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
C 00440 Phosphonate and phosphinate metabolism
D Riean_1720 metal-dependent hydrolase of the beta-lactamase superfamily I; PhnP protein K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]
C 00450 Selenocompound metabolism [PATH:ran00450]
D Riean_1780 homocysteine S-methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Riean_1781 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Riean_0510 methionine synthase (B12-independent) K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D Riean_1378 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D Riean_0798 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D Riean_1907 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D Riean_0106 Thioredoxin domain-containing protein K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D Riean_0393 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:ran00460]
D Riean_0229 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Riean_0448 1-alkyl-2-acetylglycerophosphocholine esterase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D Riean_0763 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:ran00470]
D Riean_1160 alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10]
D Riean_1579 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Riean_0630 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D Riean_1043 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D Riean_0433 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D Riean_1021 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:ran00480]
D Riean_0229 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Riean_0608 Peptidase M1 membrane alanine aminopeptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D Riean_0533 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D Riean_0199 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D Riean_0677 Peroxiredoxin K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:ran00540]
D Riean_0613 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D Riean_0614 3-hydroxyacyl-(acyl-carrier-protein) dehydratase K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59]
D Riean_0611 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase, non-repeat region K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D Riean_0615 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D Riean_0837 metallophosphoesterase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D Riean_0727 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D Riean_0660 lipid-A-disaccharide kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D Riean_0102 KpsF/GutQ family protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D Riean_1887 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D Riean_0907 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D Riean_0679 3-deoxy-D-manno-octulosonatecytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D Riean_1357 Three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D Riean_0349 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D Riean_1884 sulfatase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:ran00541]
D Riean_0384 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Riean_1436 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D Riean_1488 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D Riean_1341 NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D Riean_1448 Nucleotidyl transferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Riean_0735 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Riean_0736 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Riean_0737 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D Riean_1057 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D Riean_0992 mannose-6-phosphate isomerase, type 2 K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D Riean_1111 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01840 manB; phosphomannomutase [EC:5.4.2.8]
D Riean_1261 mannose-1-phosphate guanylyltransferase (GDP) K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D Riean_0757 nucleotide sugar dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D Riean_1174 oxidoreductase domain protein K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335]
D Riean_0385 DegT/DnrJ/EryC1/StrS aminotransferase K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
D Riean_0758 NAD-dependent epimerase/dehydratase K02473 wbpP; UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine 4-epimerase [EC:5.1.3.7 5.1.3.-]
C 00550 Peptidoglycan biosynthesis [PATH:ran00550]
D Riean_1148 UDP-N-acetylglucosamine1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Riean_1155 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D Riean_1040 UDP-N-acetylmuramate/alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D Riean_1043 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D Riean_1045 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D Riean_1579 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Riean_0092 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diamin opimelate/D-alanyl-D-alanylligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D Riean_1160 alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10]
D Riean_1062 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D Riean_0010 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Riean_0425 phosphoesterase PA-phosphatase related protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Riean_1044 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D Riean_1041 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D Riean_0037 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D Riean_1187 Peptidoglycan glycosyltransferase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Riean_1351 peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D Riean_1046 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D Riean_0085 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D Riean_0468 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
C 00552 Teichoic acid biosynthesis [PATH:ran00552]
D Riean_0010 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Riean_0425 phosphoesterase PA-phosphatase related protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:ran00543]
D Riean_0859 membrane bound O-acyl transferase MBOAT family protein K19294 algI; alginate O-acetyltransferase complex protein AlgI
D Riean_1628 Serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Riean_0856 transferase hexapeptide repeat containing protein K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:ran00730]
D Riean_0480 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Riean_0486 thiamine monophosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D Riean_1323 thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D Riean_0262 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D Riean_0546 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D Riean_1733 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D Riean_1699 thiamine pyrophosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D Riean_0077 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:ran00740]
D Riean_1455 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D Riean_1568 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D Riean_1661 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D Riean_1204 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D Riean_1004 riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D Riean_1704 riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D Riean_0503 NUDIX hydrolase K12152 nudJ; phosphatase NudJ [EC:3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:ran00750]
D Riean_0531 pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D Riean_0150 Phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D Riean_0571 pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
C 00760 Nicotinate and nicotinamide metabolism [PATH:ran00760]
D Riean_1385 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D Riean_0659 purine nucleoside phosphorylase I, inosine and guanosine-specific K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D Riean_0428 metallophosphoesterase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D Riean_1178 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D Riean_0867 nicotinate (nicotinamide) nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D Riean_1623 NAD+ synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D Riean_0353 Nicotinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D Riean_0020 Silent information regulator protein Sir2 K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D Riean_0928 ATP-NAD/AcoX kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D Riean_0977 Aldehyde Dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:ran00770]
D Riean_1498 ketopantoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D Riean_1640 pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D Riean_1142 pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D Riean_1338 phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D Riean_1580 pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D Riean_1415 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D Riean_0506 4'-phosphopantetheinyl transferase K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D Riean_1708 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Riean_0528 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D Riean_1036 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:ran00780]
D Riean_0981 3-oxoacyl-(acyl-carrier-protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Riean_1783 Beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Riean_1164 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Riean_0061 Enoyl-(acyl-carrier-protein) reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D Riean_1784 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D Riean_1786 aminotransferase class-III K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D Riean_1785 dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D Riean_1321 biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D Riean_1229 biotin/acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:ran00785]
D Riean_0289 lipoate-protein ligase B K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D Riean_0541 lipoic acid synthetase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D Riean_0665 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Riean_0476 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Riean_1741 pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D Riean_0589 Pyruvate dehydrogenase (acetyl-transferring) K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D Riean_1740 catalytic domain-containing protein of components of various dehydrogenase complexes K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D Riean_0412 2-oxoglutarate dehydrogenase, E1 subunit K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D Riean_0411 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D Riean_0335 catalytic domain-containing protein of components of various dehydrogenase complexes K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D Riean_0386 Transketolase domain-containing protein K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D Riean_0705 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D Riean_0162 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Riean_1531 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:ran00790]
D Riean_1435 GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D Riean_0546 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D Riean_1733 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D Riean_1014 alkaline phosphatase D K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D Riean_1530 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D Riean_0577 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D Riean_0524 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D Riean_0733 Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D Riean_1298 FolC bifunctional protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D Riean_1455 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D Riean_1568 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D Riean_1116 aminodeoxychorismate synthase, subunit I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D Riean_1117 aminotransferase class IV K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D Riean_0836 6-pyruvoyl tetrahydropterin synthase and hypothetical protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D Riean_0635 Radical SAM domain protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
C 00670 One carbon pool by folate [PATH:ran00670]
D Riean_0733 Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D Riean_0216 Formate-tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D Riean_0765 5; methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D Riean_0763 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Riean_0191 formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D Riean_0282 IMP cyclohydrolase; phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D Riean_0629 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D Riean_0162 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Riean_1780 homocysteine S-methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Riean_1781 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Riean_0607 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D Riean_1782 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D Riean_0956 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:ran00860]
D Riean_1365 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D Riean_1718 glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D Riean_0631 Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D Riean_1364 porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D Riean_1363 Uroporphyrinogen III synthase HEM4 K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D Riean_1209 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D Riean_1362 uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D Riean_0361 oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D Riean_0097 Uncharacterized protein family UPF0093 K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-]
D Riean_1405 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D Riean_1698 ATP/cobalamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:ran00130]
D Riean_0054 demethylmenaquinone methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D Riean_1695 Chorismate binding protein K02361 entC; isochorismate synthase [EC:5.4.4.2]
D Riean_1086 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D Riean_0699 AMP-dependent synthetase and ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D Riean_0298 1,4-Dihydroxy-2-naphthoate synthase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D Riean_1694 thioesterase superfamily protein K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D Riean_0299 1,4-dihydroxy-2-naphtoate prenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D Riean_0661 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:ran00900]
D Riean_0693 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Riean_1569 hydroxymethylglutaryl-CoA reductase, degradative K00054 mvaA; hydroxymethylglutaryl-CoA reductase [EC:1.1.1.88]
D Riean_0436 GHMP kinase K00869 MVK; mevalonate kinase [EC:2.7.1.36]
D Riean_0643 GHMP kinase K01597 MVD; diphosphomevalonate decarboxylase [EC:4.1.1.33]
D Riean_0161 isopentenyl-diphosphate delta-isomerase, type 1 K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D Riean_0484 Polyprenyl synthetase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D Riean_0501 Polyprenyl synthetase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D Riean_1062 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
D Riean_1036 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00907 Pinene, camphor and geraniol degradation [PATH:ran00907]
D Riean_1376 Hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D Riean_0065 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D Riean_0363 Transketolase domain-containing protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Riean_0370 Transketolase central region K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:ran00523]
D Riean_1448 Nucleotidyl transferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Riean_0735 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Riean_0736 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Riean_0737 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D Riean_1057 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D Riean_1695 Chorismate binding protein K02361 entC; isochorismate synthase [EC:5.4.4.2]
C 01055 Biosynthesis of vancomycin group antibiotics
D Riean_0736 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis
C 00261 Monobactam biosynthesis [PATH:ran00261]
D Riean_0619 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Riean_1577 Homoserine dehydrogenase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D Riean_1072 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Riean_0023 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D Riean_0123 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:ran00521]
D Riean_1552 Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D Riean_1346 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D Riean_0682 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D Riean_1448 Nucleotidyl transferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Riean_0735 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Riean_0736 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Riean_0737 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D Riean_1057 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D Riean_1552 Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D Riean_1346 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:ran00525]
D Riean_1448 Nucleotidyl transferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Riean_0735 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Riean_0736 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:ran00401]
D Riean_1878 Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D Riean_0681 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Riean_0108 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Riean_1125 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D Riean_0240 Chorismate binding protein K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D Riean_0239 anthranilate synthase, component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D Riean_1308 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D Riean_1164 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Riean_0061 Enoyl-(acyl-carrier-protein) reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D Riean_0741 acyl carrier protein K02078 acpP; acyl carrier protein
D Riean_0982 acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites
D Riean_1426 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:ran00362]
D Riean_0065 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D Riean_0064 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D Riean_0327 acyl-CoA dehydrogenase domain-containing protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D Riean_0246 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D Riean_0693 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:ran00625]
D Riean_1036 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
D Riean_0065 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation [PATH:ran00643]
D Riean_1546 homogentisate 12-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D Riean_0663 fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
C 00791 Atrazine degradation
D Riean_0918 urease, alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D Riean_0919 urease, beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5]
D Riean_0920 urease, gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:ran03020]
D Riean_1519 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D Riean_1520 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D Riean_0879 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:ran03010]
D Riean_0286 SSU ribosomal protein S1P K02945 RP-S1; small subunit ribosomal protein S1
D Riean_1482 SSU ribosomal protein S2P K02967 RP-S2; small subunit ribosomal protein S2
D Riean_0899 SSU ribosomal protein S3P K02982 RP-S3; small subunit ribosomal protein S3
D Riean_0880 SSU ribosomal protein S4P K02986 RP-S4; small subunit ribosomal protein S4
D Riean_0888 SSU ribosomal protein S5P K02988 RP-S5; small subunit ribosomal protein S5
D Riean_0462 SSU ribosomal protein S6P K02990 RP-S6; small subunit ribosomal protein S6
D Riean_1393 SSU ribosomal protein S7P K02992 RP-S7; small subunit ribosomal protein S7
D Riean_0891 SSU ribosomal protein S8P K02994 RP-S8; small subunit ribosomal protein S8
D Riean_1483 SSU ribosomal protein S9P K02996 RP-S9; small subunit ribosomal protein S9
D Riean_1395 SSU ribosomal protein S10P K02946 RP-S10; small subunit ribosomal protein S10
D Riean_0881 SSU ribosomal protein S11P K02948 RP-S11; small subunit ribosomal protein S11
D Riean_1392 SSU ribosomal protein S12P K02950 RP-S12; small subunit ribosomal protein S12
D Riean_0882 SSU ribosomal protein S13P K02952 RP-S13; small subunit ribosomal protein S13
D Riean_0892 SSU ribosomal protein S14P K02954 RP-S14; small subunit ribosomal protein S14
D Riean_0624 SSU ribosomal protein S15P K02956 RP-S15; small subunit ribosomal protein S15
D Riean_0633 SSU ribosomal protein S16P K02959 RP-S16; small subunit ribosomal protein S16
D Riean_0896 SSU ribosomal protein S17P K02961 RP-S17; small subunit ribosomal protein S17
D Riean_0461 SSU ribosomal protein S18P K02963 RP-S18; small subunit ribosomal protein S18
D Riean_0901 SSU ribosomal protein S19P K02965 RP-S19; small subunit ribosomal protein S19
D Riean_0869 SSU ribosomal protein S20P K02968 RP-S20; small subunit ribosomal protein S20
D Riean_1503 SSU ribosomal protein S21P K02970 RP-S21; small subunit ribosomal protein S21
D Riean_1511 LSU ribosomal protein L1P K02863 RP-L1; large subunit ribosomal protein L1
D Riean_0902 LSU ribosomal protein L2P K02886 RP-L2; large subunit ribosomal protein L2
D Riean_0905 LSU ribosomal protein L3P K02906 RP-L3; large subunit ribosomal protein L3
D Riean_0904 LSU ribosomal protein L4P K02926 RP-L4; large subunit ribosomal protein L4
D Riean_0893 LSU ribosomal protein L5P K02931 RP-L5; large subunit ribosomal protein L5
D Riean_0890 LSU ribosomal protein L6P K02933 RP-L6; large subunit ribosomal protein L6
D Riean_1513 LSU ribosomal protein L12P K02935 RP-L7; large subunit ribosomal protein L7/L12
D Riean_0460 LSU ribosomal protein L9P K02939 RP-L9; large subunit ribosomal protein L9
D Riean_1512 LSU ribosomal protein L10P K02864 RP-L10; large subunit ribosomal protein L10
D Riean_1510 LSU ribosomal protein L11P K02867 RP-L11; large subunit ribosomal protein L11
D Riean_1484 LSU ribosomal protein L13P K02871 RP-L13; large subunit ribosomal protein L13
D Riean_0895 LSU ribosomal protein L14P K02874 RP-L14; large subunit ribosomal protein L14
D Riean_0886 LSU ribosomal protein L15P K02876 RP-L15; large subunit ribosomal protein L15
D Riean_0898 LSU ribosomal protein L16P K02878 RP-L16; large subunit ribosomal protein L16
D Riean_0878 LSU ribosomal protein L17P K02879 RP-L17; large subunit ribosomal protein L17
D Riean_0889 LSU ribosomal protein L18P K02881 RP-L18; large subunit ribosomal protein L18
D Riean_0215 LSU ribosomal protein L19P K02884 RP-L19; large subunit ribosomal protein L19
D Riean_0245 LSU ribosomal protein L20P K02887 RP-L20; large subunit ribosomal protein L20
D Riean_1153 LSU ribosomal protein L21P K02888 RP-L21; large subunit ribosomal protein L21
D Riean_0900 LSU ribosomal protein L22P K02890 RP-L22; large subunit ribosomal protein L22
D Riean_0903 LSU ribosomal protein L23P K02892 RP-L23; large subunit ribosomal protein L23
D Riean_0894 LSU ribosomal protein L24P K02895 RP-L24; large subunit ribosomal protein L24
D Riean_1259 LSU ribosomal protein L25P K02897 RP-L25; large subunit ribosomal protein L25
D Riean_1152 LSU ribosomal protein L27P K02899 RP-L27; large subunit ribosomal protein L27
D Riean_1211 LSU ribosomal protein L28P K02902 RP-L28; large subunit ribosomal protein L28
D Riean_0897 LSU ribosomal protein L29P K02904 RP-L29; large subunit ribosomal protein L29
D Riean_0887 LSU ribosomal protein L30P K02907 RP-L30; large subunit ribosomal protein L30
D Riean_0772 LSU ribosomal protein L31P K02909 RP-L31; large subunit ribosomal protein L31
D Riean_1001 LSU ribosomal protein L32P K02911 RP-L32; large subunit ribosomal protein L32
D Riean_1212 LSU ribosomal protein L33P K02913 RP-L33; large subunit ribosomal protein L33
D Riean_1008 LSU ribosomal protein L34P K02914 RP-L34; large subunit ribosomal protein L34
D Riean_0244 LSU ribosomal protein L35P K02916 RP-L35; large subunit ribosomal protein L35
D Riean_0883 LSU ribosomal protein L36P K02919 RP-L36; large subunit ribosomal protein L36
D Riean_R0022 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Riean_R0032 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Riean_R0044 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Riean_R0019 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Riean_R0047 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Riean_R0029 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Riean_R0018 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Riean_R0028 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Riean_R0048 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:ran00970]
D Riean_R0020 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Riean_R0030 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Riean_R0046 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Riean_R0002 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Riean_R0001 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Riean_R0012 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Riean_R0003 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Riean_R0033 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D Riean_R0006 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D Riean_R0007 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D Riean_R0023 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D Riean_R0049 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Riean_R0025 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Riean_R0024 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Riean_R0035 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Riean_R0041 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Riean_R0026 tRNA-His K14226 tRNA-His; tRNA His
D Riean_R0021 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Riean_R0045 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Riean_R0031 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Riean_R0009 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Riean_R0051 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Riean_R0036 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Riean_R0034 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Riean_R0008 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Riean_R0010 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Riean_R0004 tRNA-Met K14230 tRNA-Met; tRNA Met
D Riean_R0011 tRNA-Met K14230 tRNA-Met; tRNA Met
D Riean_R0015 tRNA-Met K14230 tRNA-Met; tRNA Met
D Riean_R0016 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D Riean_R0013 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Riean_R0014 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Riean_R0052 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Riean_R0005 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Riean_R0042 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Riean_R0039 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Riean_R0043 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D Riean_R0040 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D Riean_R0038 tRNA-Val K14237 tRNA-Val; tRNA Val
D Riean_R0037 tRNA-Val K14237 tRNA-Val; tRNA Val
D Riean_0845 glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D Riean_0434 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D Riean_1553 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Riean_0192 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Riean_1544 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D Riean_1377 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D Riean_0241 Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Riean_0960 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Riean_1434 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Riean_0393 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Riean_0629 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D Riean_0687 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Riean_0951 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Riean_1126 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Riean_0253 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D Riean_0775 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Riean_0673 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Riean_0352 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Riean_1636 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Riean_0377 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Riean_0649 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Riean_1266 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:ran03060]
D Riean_0885 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY
D Riean_1508 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D Riean_0204 protein translocase subunit secG K03075 secG; preprotein translocase subunit SecG
D Riean_0360 protein translocase subunit secF; protein translocase subunit secD K12257 secDF; SecD/SecF fusion protein
D Riean_1430 protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC
D Riean_0779 protein translocase subunit yidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Riean_1343 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Riean_0275 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Riean_R0050 RNA component of signal recognition particle K01983 ffs; SRP RNA
D Riean_1214 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Riean_1451 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA
D Riean_1452 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA
D Riean_0103 Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
D Riean_0122 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D Riean_1128 peptidase A8 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:ran04122]
D Riean_0480 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Riean_1291 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D Riean_1188 UBA/THIF-type NAD/FAD binding protein K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
C 03050 Proteasome
C 03018 RNA degradation [PATH:ran03018]
D Riean_0874 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Riean_0625 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D Riean_0395 DEAD/DEAH box helicase domain protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D Riean_0452 DEAD/DEAH box helicase domain protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D Riean_1169 RNAse R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D Riean_0313 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D Riean_0628 ATP-dependent DNA helicase, RecQ family K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D Riean_0101 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D Riean_1477 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D Riean_0221 metal dependent phosphohydrolase K18682 rny; ribonucrease Y [EC:3.1.-.-]
D Riean_0595 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Riean_0464 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Riean_0374 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Riean_0560 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D Riean_0478 protein of unknown function DUF344 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D Riean_0477 protein of unknown function DUF344 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D Riean_1794 polynucleotide adenylyltransferase/metal dependent phosphohydrolase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:ran03030]
D Riean_0550 Exonuclease RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Riean_1317 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Riean_0623 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Riean_0515 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Riean_0087 DNA polymerase III subunits gamma and tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Riean_0133 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Riean_0378 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Riean_0658 primary replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D Riean_1863 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D Riean_0321 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Riean_0657 Ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D Riean_0778 Ribonuclease H K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D Riean_0209 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Riean_1605 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:ran03410]
D Riean_0841 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D Riean_1710 Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D Riean_1557 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D Riean_0237 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D Riean_0602 exodeoxyribonuclease III Xth K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D Riean_0209 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Riean_0866 exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Riean_1605 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:ran03420]
D Riean_1654 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D Riean_0284 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D Riean_1885 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D Riean_1252 excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B
D Riean_1413 excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D Riean_0208 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Riean_0209 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Riean_1605 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:ran03430]
D Riean_1223 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D Riean_0587 DNA mismatch repair protein MutS domain protein K07456 mutS2; DNA mismatch repair protein MutS2
D Riean_1076 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D Riean_0208 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Riean_0866 exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Riean_0321 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Riean_0623 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Riean_0378 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Riean_0515 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Riean_0133 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Riean_0087 DNA polymerase III subunits gamma and tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Riean_0550 Exonuclease RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Riean_1317 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Riean_1605 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D Riean_1788 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D Riean_1817 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:ran03440]
D Riean_0866 exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Riean_0321 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Riean_0406 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D Riean_0202 recombination protein RecR K06187 recR; recombination protein RecR
D Riean_0781 recA protein K03553 recA; recombination protein RecA
D Riean_0209 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Riean_0834 Holliday junction DNA helicase subunit RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D Riean_1417 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D Riean_0829 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D Riean_0496 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Riean_0623 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Riean_0378 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Riean_0515 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Riean_0133 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Riean_0087 DNA polymerase III subunits gamma and tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Riean_0550 Exonuclease RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Riean_1317 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Riean_0467 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:ran03250]
D Riean_0062 Peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus and Lyssavirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:ran02010]
D Riean_0990 Mammalian cell entry related domain protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D Riean_0637 protein of unknown function DUF140 K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D Riean_0638 ABC transporter related protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D Riean_1584 protein of unknown function DUF214 K09808 lolC_E; lipoprotein-releasing system permease protein
D Riean_0544 protein of unknown function DUF214 K09808 lolC_E; lipoprotein-releasing system permease protein
D Riean_0520 ABC transporter related protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D Riean_0128 permease YjgP/YjgQ family protein K07091 lptF; lipopolysaccharide export system permease protein
D Riean_1228 permease YjgP/YjgQ family protein K11720 lptG; lipopolysaccharide export system permease protein
D Riean_1697 ABC transporter related protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D Riean_1669 nitrous oxide reductase maturation transmembrane protein NosY K19341 nosY; Cu-processing system permease protein
D Riean_1670 ABC transporter related protein K19340 nosF; Cu-processing system ATP-binding protein
D Riean_0012 cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D Riean_1007 ABC transporter related protein K09812 ftsE; cell division transport system ATP-binding protein
D Riean_1475 ABC transporter related protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D Riean_0941 ABC transporter related protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D Riean_1634 ABC transporter related protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
C 02060 Phosphotransferase system (PTS)
C 03070 Bacterial secretion system [PATH:ran03070]
D Riean_1017 outer membrane efflux protein K12340 tolC; outer membrane protein
D Riean_0360 protein translocase subunit secF; protein translocase subunit secD K12257 secDF; SecD/SecF fusion protein
D Riean_1508 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D Riean_0204 protein translocase subunit secG K03075 secG; preprotein translocase subunit SecG
D Riean_0885 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY
D Riean_1430 protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC
D Riean_0779 protein translocase subunit yidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Riean_1343 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Riean_1214 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Riean_0275 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Riean_1451 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA
D Riean_1452 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA
D Riean_0103 Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:ran02020]
D Riean_1145 integral membrane sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D Riean_1651 two component transcriptional regulator, winged helix family K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D Riean_0546 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D Riean_1733 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D Riean_1014 alkaline phosphatase D K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D Riean_0953 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D Riean_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D Riean_1012 TonB-dependent receptor plug K19611 fepA; ferric enterobactin receptor
D Riean_1275 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Riean_0693 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Riean_1543 RNA polymerase, sigma 54 subunit, RpoN/SigL K03092 rpoN; RNA polymerase sigma-54 factor
D Riean_1679 putative transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Riean_1663 response regulator receiver protein K07720 yesN; two-component system, response regulator YesN
D Riean_1676 cytochrome c class I K08738 CYC; cytochrome c
D Riean_0290 cytochrome c class I K08738 CYC; cytochrome c
D Riean_1494 cytochrome c oxidase, cbb3-type, subunit I K15862 ccoNO; cytochrome c oxidase cbb3-type subunit I/II [EC:7.1.1.9]
D Riean_1493 hypothetical protein K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D Riean_1492 cytochrome c class I K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D Riean_1017 outer membrane efflux protein K12340 tolC; outer membrane protein
D Riean_0760 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D Riean_0002 protein tyrosine phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D Riean_0759 capsular exopolysaccharide family K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D Riean_1222 protein involved in gliding motility EpsB K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:ran02024]
D Riean_0240 Chorismate binding protein K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D Riean_0239 anthranilate synthase, component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D Riean_0398 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Riean_0642 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Riean_1679 putative transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Riean_1455 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D Riean_1661 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D Riean_1110 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D Riean_0779 protein translocase subunit yidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Riean_0360 protein translocase subunit secF; protein translocase subunit secD K12257 secDF; SecD/SecF fusion protein
D Riean_1508 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D Riean_0204 protein translocase subunit secG K03075 secG; preprotein translocase subunit SecG
D Riean_0885 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY
D Riean_1430 protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC
D Riean_1343 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Riean_1214 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Riean_0275 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
D Riean_1353 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:ran02040]
D Riean_1353 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D Riean_0676 RNA polymerase, sigma 70 subunit, RpoD subfamily K03086 rpoD; RNA polymerase primary sigma factor
D Riean_1543 RNA polymerase, sigma 54 subunit, RpoN/SigL K03092 rpoN; RNA polymerase sigma-54 factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D Riean_0874 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:ran04980]
D Riean_1698 ATP/cobalamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D Riean_1780 homocysteine S-methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Riean_1781 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:ran01501]
D Riean_1456 glycoside hydrolase family 3 domain protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D Riean_0474 peptidase M56 BlaR1 K02172 blaR1; bla regulator protein blaR1
D Riean_0504 Penicillinase repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D Riean_0475 transcriptional repressor, CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D Riean_1108 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Riean_1016 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Riean_1110 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D Riean_1017 outer membrane efflux protein K12340 tolC; outer membrane protein
D Riean_1187 Peptidoglycan glycosyltransferase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Riean_1351 peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D Riean_1046 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:ran01502]
D Riean_1579 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Riean_1160 alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10]
D Riean_0092 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diamin opimelate/D-alanyl-D-alanylligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D Riean_1044 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D Riean_1041 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:ran01503]
D Riean_1884 sulfatase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D Riean_1136 hypothetical protein K06079 cutF; copper homeostasis protein (lipoprotein)
D Riean_0870 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Riean_1915 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Riean_0953 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D Riean_0062 Peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D Riean_1108 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Riean_1016 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Riean_1017 outer membrane efflux protein K12340 tolC; outer membrane protein
D Riean_0613 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:ran01000]
C 01001 Protein kinases [BR:ran01001]
D Riean_1565 PASTA domain containing protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D Riean_0759 capsular exopolysaccharide family K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D Riean_1222 protein involved in gliding motility EpsB K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D Riean_1145 integral membrane sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D Riean_1271 signal transduction histidine kinase, LytS K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:ran01009]
D Riean_0595 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 01002 Peptidases and inhibitors [BR:ran01002]
D Riean_1128 peptidase A8 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D Riean_0287 peptidase C1B bleomycin hydrolase K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40]
D Riean_0146 GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D Riean_1307 amino acid/amide ABC transporter substrate-binding protein, HAAT family K19223 lytF; peptidoglycan DL-endopeptidase LytF [EC:3.4.-.-]
D Riean_1274 NLP/P60 protein K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13]
D Riean_1355 NLP/P60 protein K20742 ykfC; gamma-D-glutamyl-L-lysine dipeptidyl-peptidase [EC:3.4.14.13]
D Riean_0139 NLP/P60 protein K13695 nlpC; probable lipoprotein NlpC
D Riean_0250 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D Riean_1643 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Riean_0749 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D Riean_0193 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D Riean_0767 ThiJ/PfpI domain-containing protein K05523 hchA; D-lactate dehydratase / protein deglycase [EC:4.2.1.130 3.5.1.124]
D Riean_0074 Abortive infection protein K07052 K07052; CAAX protease family protein
D Riean_0608 Peptidase M1 membrane alanine aminopeptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D Riean_0574 Oligopeptidase A K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5]
D Riean_0305 peptidyl-dipeptidase Dcp K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5]
D Riean_0548 Endothelin-converting enzyme 1 K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D Riean_0205 peptidase M16 domain protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D Riean_0206 peptidase M16 domain protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D Riean_1375 peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D Riean_0533 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D Riean_0356 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D Riean_0694 Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D Riean_1231 ATP-dependent metalloprotease FtsH K08956 AFG3; AFG3 family protein [EC:3.4.24.-]
D Riean_1248 membrane-associated zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D Riean_0474 peptidase M56 BlaR1 K02172 blaR1; bla regulator protein blaR1
D Riean_0953 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D Riean_0120 peptidase S8 and S53 subtilisin kexin sedolisin K13274 wprA; cell wall-associated protease [EC:3.4.21.-]
D Riean_0839 prolyl oligopeptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26]
D Riean_0729 peptidase S9B dipeptidylpeptidase IV domain protein K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D Riean_1719 peptidase S9B dipeptidylpeptidase IV domain protein K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D Riean_1210 Oligopeptidase B K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D Riean_0085 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D Riean_0468 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D Riean_1862 Endopeptidase Clp K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D Riean_1054 ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D Riean_0122 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D Riean_0340 alpha/beta hydrolase fold protein K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D Riean_1179 carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D Riean_0027 peptidase S41 K08676 tri; tricorn protease [EC:3.4.21.-]
D Riean_0578 signal peptide peptidase SppA, 67K type K04773 sppA; protease IV [EC:3.4.21.-]
D Riean_2000 Dipeptidase E K05995 pepE; dipeptidase E [EC:3.4.13.21]
D Riean_1075 Rhomboid family protein K07059 K07059; rhomboid family protein
D Riean_1268 peptidase U61 LD-carboxypeptidase A K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D Riean_0229 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Riean_0954 peptidase U32 K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D Riean_1668 proteinase inhibitor I11 ecotin K08276 eco; ecotin
C 01003 Glycosyltransferases [BR:ran01003]
D Riean_1225 glycosyl transferase family 2 K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D Riean_1641 Starch synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D Riean_0037 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D Riean_1187 Peptidoglycan glycosyltransferase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:ran01005]
D Riean_0613 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D Riean_0727 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D Riean_0614 3-hydroxyacyl-(acyl-carrier-protein) dehydratase K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59]
D Riean_0611 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase, non-repeat region K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D Riean_0615 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D Riean_0837 metallophosphoesterase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D Riean_0660 lipid-A-disaccharide kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D Riean_0349 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D Riean_1357 Three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D Riean_1884 sulfatase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D Riean_1887 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D Riean_0679 3-deoxy-D-manno-octulosonatecytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D Riean_0907 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D Riean_0102 KpsF/GutQ family protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D Riean_0142 glycosyl transferase family 2 K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:ran01011]
D Riean_1148 UDP-N-acetylglucosamine1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Riean_1155 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D Riean_1040 UDP-N-acetylmuramate/alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D Riean_1043 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D Riean_1045 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D Riean_1160 alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10]
D Riean_1579 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Riean_0630 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D Riean_1268 peptidase U61 LD-carboxypeptidase A K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D Riean_1044 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D Riean_1041 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D Riean_0010 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Riean_0425 phosphoesterase PA-phosphatase related protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Riean_1187 Peptidoglycan glycosyltransferase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Riean_1351 peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D Riean_1046 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D Riean_0085 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D Riean_0468 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D Riean_0037 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D Riean_1274 NLP/P60 protein K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13]
D Riean_1307 amino acid/amide ABC transporter substrate-binding protein, HAAT family K19223 lytF; peptidoglycan DL-endopeptidase LytF [EC:3.4.-.-]
D Riean_0432 aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D Riean_0601 rare lipoprotein A K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D Riean_0870 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Riean_1915 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Riean_0563 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD K11066 amiD; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:ran01004]
D Riean_1308 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D Riean_0744 Beta-ketoacyl-acyl-carrier-protein synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D Riean_0056 Beta-ketoacyl-acyl-carrier-protein synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D Riean_0981 3-oxoacyl-(acyl-carrier-protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Riean_1783 Beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Riean_1164 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Riean_0614 3-hydroxyacyl-(acyl-carrier-protein) dehydratase K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59]
D Riean_0061 Enoyl-(acyl-carrier-protein) reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D Riean_0796 2-nitropropane dioxygenase NPD K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D Riean_0309 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Riean_0398 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Riean_0642 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Riean_1463 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:ran01006]
D Riean_0484 Polyprenyl synthetase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D Riean_0501 Polyprenyl synthetase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D Riean_1062 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D Riean_1149 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D Riean_0299 1,4-dihydroxy-2-naphtoate prenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
C 01007 Amino acid related enzymes [BR:ran01007]
D Riean_0434 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D Riean_0845 glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D Riean_0649 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Riean_1266 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D Riean_1434 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Riean_0775 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Riean_0393 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Riean_1126 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Riean_0687 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Riean_0951 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Riean_0253 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D Riean_0192 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Riean_1544 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D Riean_0352 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Riean_1377 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D Riean_0960 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Riean_0673 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Riean_0241 Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Riean_1553 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Riean_1636 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Riean_0377 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Riean_0681 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Riean_0108 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Riean_1125 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Riean_0469 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D Riean_0499 8-amino-7-oxononanoate synthase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D Riean_1784 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D Riean_0998 ornithine aminotransferase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D Riean_1619 aminotransferase class-III K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D Riean_1786 aminotransferase class-III K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D Riean_1718 glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D Riean_1708 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Riean_0150 Phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D Riean_0385 DegT/DnrJ/EryC1/StrS aminotransferase K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:ran00194]
D Riean_1706 ATPase, F1 complex, delta/epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D Riean_1705 ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D Riean_0416 ATP synthase F1 subcomplex gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D Riean_0417 ATP synthase F1 subcomplex alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D Riean_0418 ATP synthase F1 subcomplex delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D Riean_0419 ATP synthase F0 subcomplex B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D Riean_0420 ATP synthase F0 subcomplex C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D Riean_0421 ATP synthase F0 subcomplex A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:ran03000]
D Riean_1425 transcriptional regulator, LysR family K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D Riean_1018 regulatory protein TetR K09017 rutR; TetR/AcrR family transcriptional regulator
D Riean_0006 transcriptional regulator, AsnC family K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D Riean_0831 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D Riean_0063 regulatory protein MarR K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D Riean_1617 ferric uptake regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D Riean_1679 putative transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Riean_1696 transcriptional regulator, Crp/Fnr family K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D Riean_1253 putative transcriptional regulator, Crp/Fnr family K21562 flp; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D Riean_0110 putative transcriptional regulator, Crp/Fnr family K21562 flp; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D Riean_0766 putative transcriptional regulator, Crp/Fnr family K21562 flp; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D Riean_1681 transcriptional regulator, BadM/Rrf2 family K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D Riean_1691 transcriptional regulator, PadR family K10947 K10947; PadR family transcriptional regulator
D Riean_0021 iron (metal) dependent repressor, DtxR family K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D Riean_0504 Penicillinase repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D Riean_0475 transcriptional repressor, CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D Riean_1229 biotin/acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D Riean_1806 transcriptional regulator, XRE family K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D Riean_1924 helix-turn-helix domain protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D Riean_0125 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Riean_0532 protein of unknown function DUF179 K07735 algH; putative transcriptional regulator
D Riean_1127 DnaK suppressor protein, putative K06204 dksA; RNA polymerase-binding transcription factor
D Riean_1049 MraZ protein K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:ran03021]
D Riean_0879 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D Riean_1519 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D Riean_1520 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D Riean_0676 RNA polymerase, sigma 70 subunit, RpoD subfamily K03086 rpoD; RNA polymerase primary sigma factor
D Riean_1665 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D Riean_1895 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D Riean_0542 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D Riean_1543 RNA polymerase, sigma 54 subunit, RpoN/SigL K03092 rpoN; RNA polymerase sigma-54 factor
D Riean_1301 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA
D Riean_1428 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB
D Riean_1509 transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG
D Riean_1127 DnaK suppressor protein, putative K06204 dksA; RNA polymerase-binding transcription factor
D Riean_0581 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D Riean_1477 transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:ran03019]
D Riean_1559 ribonuclease, Rne/Rng family K08301 rng; ribonuclease G [EC:3.1.26.-]
D Riean_0980 RNAse III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D Riean_0221 metal dependent phosphohydrolase K18682 rny; ribonucrease Y [EC:3.1.-.-]
D Riean_1169 RNAse R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D Riean_0395 DEAD/DEAH box helicase domain protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D Riean_0452 DEAD/DEAH box helicase domain protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D Riean_0313 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D Riean_0628 ATP-dependent DNA helicase, RecQ family K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D Riean_0101 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D Riean_0874 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Riean_0625 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D Riean_1477 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D Riean_0595 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Riean_0464 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Riean_0374 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Riean_0560 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D Riean_0478 protein of unknown function DUF344 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D Riean_0477 protein of unknown function DUF344 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D Riean_1794 polynucleotide adenylyltransferase/metal dependent phosphohydrolase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
C 03041 Spliceosome
C 03011 Ribosome [BR:ran03011]
D Riean_0286 SSU ribosomal protein S1P K02945 RP-S1; small subunit ribosomal protein S1
D Riean_1482 SSU ribosomal protein S2P K02967 RP-S2; small subunit ribosomal protein S2
D Riean_0899 SSU ribosomal protein S3P K02982 RP-S3; small subunit ribosomal protein S3
D Riean_0880 SSU ribosomal protein S4P K02986 RP-S4; small subunit ribosomal protein S4
D Riean_0888 SSU ribosomal protein S5P K02988 RP-S5; small subunit ribosomal protein S5
D Riean_0462 SSU ribosomal protein S6P K02990 RP-S6; small subunit ribosomal protein S6
D Riean_1393 SSU ribosomal protein S7P K02992 RP-S7; small subunit ribosomal protein S7
D Riean_0891 SSU ribosomal protein S8P K02994 RP-S8; small subunit ribosomal protein S8
D Riean_1483 SSU ribosomal protein S9P K02996 RP-S9; small subunit ribosomal protein S9
D Riean_1395 SSU ribosomal protein S10P K02946 RP-S10; small subunit ribosomal protein S10
D Riean_0881 SSU ribosomal protein S11P K02948 RP-S11; small subunit ribosomal protein S11
D Riean_1392 SSU ribosomal protein S12P K02950 RP-S12; small subunit ribosomal protein S12
D Riean_0882 SSU ribosomal protein S13P K02952 RP-S13; small subunit ribosomal protein S13
D Riean_0892 SSU ribosomal protein S14P K02954 RP-S14; small subunit ribosomal protein S14
D Riean_0624 SSU ribosomal protein S15P K02956 RP-S15; small subunit ribosomal protein S15
D Riean_0633 SSU ribosomal protein S16P K02959 RP-S16; small subunit ribosomal protein S16
D Riean_0896 SSU ribosomal protein S17P K02961 RP-S17; small subunit ribosomal protein S17
D Riean_0461 SSU ribosomal protein S18P K02963 RP-S18; small subunit ribosomal protein S18
D Riean_0901 SSU ribosomal protein S19P K02965 RP-S19; small subunit ribosomal protein S19
D Riean_0869 SSU ribosomal protein S20P K02968 RP-S20; small subunit ribosomal protein S20
D Riean_1503 SSU ribosomal protein S21P K02970 RP-S21; small subunit ribosomal protein S21
D Riean_1511 LSU ribosomal protein L1P K02863 RP-L1; large subunit ribosomal protein L1
D Riean_0902 LSU ribosomal protein L2P K02886 RP-L2; large subunit ribosomal protein L2
D Riean_0905 LSU ribosomal protein L3P K02906 RP-L3; large subunit ribosomal protein L3
D Riean_0904 LSU ribosomal protein L4P K02926 RP-L4; large subunit ribosomal protein L4
D Riean_0893 LSU ribosomal protein L5P K02931 RP-L5; large subunit ribosomal protein L5
D Riean_0890 LSU ribosomal protein L6P K02933 RP-L6; large subunit ribosomal protein L6
D Riean_0460 LSU ribosomal protein L9P K02939 RP-L9; large subunit ribosomal protein L9
D Riean_1512 LSU ribosomal protein L10P K02864 RP-L10; large subunit ribosomal protein L10
D Riean_1510 LSU ribosomal protein L11P K02867 RP-L11; large subunit ribosomal protein L11
D Riean_1513 LSU ribosomal protein L12P K02935 RP-L7; large subunit ribosomal protein L7/L12
D Riean_1484 LSU ribosomal protein L13P K02871 RP-L13; large subunit ribosomal protein L13
D Riean_0895 LSU ribosomal protein L14P K02874 RP-L14; large subunit ribosomal protein L14
D Riean_0886 LSU ribosomal protein L15P K02876 RP-L15; large subunit ribosomal protein L15
D Riean_0898 LSU ribosomal protein L16P K02878 RP-L16; large subunit ribosomal protein L16
D Riean_0878 LSU ribosomal protein L17P K02879 RP-L17; large subunit ribosomal protein L17
D Riean_0889 LSU ribosomal protein L18P K02881 RP-L18; large subunit ribosomal protein L18
D Riean_0215 LSU ribosomal protein L19P K02884 RP-L19; large subunit ribosomal protein L19
D Riean_0245 LSU ribosomal protein L20P K02887 RP-L20; large subunit ribosomal protein L20
D Riean_1153 LSU ribosomal protein L21P K02888 RP-L21; large subunit ribosomal protein L21
D Riean_0900 LSU ribosomal protein L22P K02890 RP-L22; large subunit ribosomal protein L22
D Riean_0903 LSU ribosomal protein L23P K02892 RP-L23; large subunit ribosomal protein L23
D Riean_0894 LSU ribosomal protein L24P K02895 RP-L24; large subunit ribosomal protein L24
D Riean_1152 LSU ribosomal protein L27P K02899 RP-L27; large subunit ribosomal protein L27
D Riean_1211 LSU ribosomal protein L28P K02902 RP-L28; large subunit ribosomal protein L28
D Riean_0897 LSU ribosomal protein L29P K02904 RP-L29; large subunit ribosomal protein L29
D Riean_0887 LSU ribosomal protein L30P K02907 RP-L30; large subunit ribosomal protein L30
D Riean_0772 LSU ribosomal protein L31P K02909 RP-L31; large subunit ribosomal protein L31
D Riean_1001 LSU ribosomal protein L32P K02911 RP-L32; large subunit ribosomal protein L32
D Riean_1212 LSU ribosomal protein L33P K02913 RP-L33; large subunit ribosomal protein L33
D Riean_1008 LSU ribosomal protein L34P K02914 RP-L34; large subunit ribosomal protein L34
D Riean_0244 LSU ribosomal protein L35P K02916 RP-L35; large subunit ribosomal protein L35
D Riean_0883 LSU ribosomal protein L36P K02919 RP-L36; large subunit ribosomal protein L36
D Riean_1259 LSU ribosomal protein L25P K02897 RP-L25; large subunit ribosomal protein L25
D Riean_R0018 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Riean_R0028 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Riean_R0048 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Riean_R0022 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Riean_R0032 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Riean_R0044 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Riean_R0019 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Riean_R0047 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Riean_R0029 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:ran03009]
D Riean_0980 RNAse III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D Riean_0214 GTP-binding protein Era K03595 era; GTPase
D Riean_0078 GTP-binding protein Obg/CgtA K03979 obgE; GTPase [EC:3.6.5.-]
D Riean_1127 DnaK suppressor protein, putative K06204 dksA; RNA polymerase-binding transcription factor
D Riean_1301 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA
D Riean_1428 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB
D Riean_1509 transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG
D Riean_0013 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D Riean_1793 Fmu (Sun) domain protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D Riean_1888 Conserved hypothetical protein CHP00095 K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D Riean_0009 protein of unknown function DUF558 K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D Riean_0382 16S rRNA m(7)G-527 methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D Riean_1048 S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D Riean_1163 Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D Riean_0003 Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D Riean_1766 RNA methyltransferase, TrmH family, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D Riean_1711 tRNA/rRNA methyltransferase (SpoU) K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D Riean_1902 protein of unknown function DUF163 K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D Riean_0308 rRNA (guanine-N(2)-)-methyltransferase K25137 rlmL; 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.173]
D Riean_0453 23S rRNA m(2)A-2503 methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D Riean_1069 23S rRNA m(5)U-1939 methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D Riean_0195 ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D Riean_1500 ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D Riean_1564 ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D Riean_1995 ribosomal large subunit pseudouridine synthase F K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
D Riean_0634 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D Riean_0734 SSU ribosomal protein S12P methylthiotransferase K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D Riean_1585 (LSU ribosomal protein L11P)-lysine N-methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D Riean_1559 ribonuclease, Rne/Rng family K08301 rng; ribonuclease G [EC:3.1.26.-]
D Riean_1655 Holliday junction resolvase YqgF K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D Riean_0313 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D Riean_0262 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D Riean_1347 ribosome-associated GTPase EngA K03977 engA; GTPase
D Riean_1290 GTP-binding protein HflX K03665 hflX; GTPase
D Riean_1626 translation factor SUA5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D Riean_0227 (p)ppGpp synthetase I, SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D Riean_0543 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D Riean_1300 protein of unknown function DUF150 K09748 rimP; ribosome maturation factor RimP
D Riean_1230 iojap-like protein K09710 ybeB; ribosome-associated protein
D Riean_1103 protein of unknown function UPF0054 K07042 ybeY; probable rRNA maturation factor
D Riean_1505 ribosome hibernation protein YhbH K05808 hpf; ribosome hibernation promoting factor
D Riean_0059 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase
D Riean_1002 protein of unknown function DUF177 K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:ran03016]
D Riean_0072 RNAse Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D Riean_0673 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Riean_1126 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Riean_0951 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Riean_0393 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Riean_0434 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D Riean_0775 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Riean_0253 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D Riean_0192 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Riean_1553 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Riean_1544 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D Riean_1377 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D Riean_0241 Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Riean_0960 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Riean_1434 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Riean_0687 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Riean_0352 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Riean_1636 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Riean_0377 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Riean_0649 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Riean_1266 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D Riean_0579 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D Riean_0582 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D Riean_0696 tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D Riean_1633 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D Riean_1993 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D Riean_0480 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Riean_1626 translation factor SUA5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D Riean_1149 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D Riean_0111 tRNA modification GTPase trmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D Riean_1102 glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D Riean_1331 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D Riean_R0017 RNA component of RNaseP K01978 rnpB; M1 RNA
D Riean_0845 glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D Riean_1084 CMP/dCMP deaminase zinc-binding protein K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D Riean_0603 tRNA-U20-dihydrouridine synthase K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D Riean_1327 tRNA-i(6)A37 thiotransferase enzyme MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D Riean_0774 MiaB-like tRNA modifying enzyme K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D Riean_0409 tRNA (Guanine37-N(1)-) methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D Riean_0276 tRNA/rRNA methyltransferase (SpoU) K00556 trmH; tRNA (guanosine-2'-O-)-methyltransferase [EC:2.1.1.34]
D Riean_1006 Methyltransferase type 12 K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223]
D Riean_0512 tRNA/rRNA methyltransferase (SpoU) K03437 spoU; RNA methyltransferase, TrmH family
D Riean_1383 tRNA/rRNA methyltransferase (SpoU) K03437 spoU; RNA methyltransferase, TrmH family
D Riean_1291 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D Riean_1131 iron-sulfur cluster assembly accessory protein K13628 iscA; iron-sulfur cluster assembly protein
D Riean_0454 S-adenosylmethionine--tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D Riean_0836 6-pyruvoyl tetrahydropterin synthase and hypothetical protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D Riean_0635 Radical SAM domain protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D Riean_1589 domain of unknown function DUF1730 K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D Riean_1227 tRNA-guanine transglycosylase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D Riean_0962 tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D Riean_0910 peptidase M22 glycoprotease K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D Riean_0008 O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D Riean_1881 Uncharacterized protein family UPF0079, ATPase K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D Riean_1332 UBA/THIF-type NAD/FAD binding protein K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D Riean_1169 RNAse R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D Riean_0625 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:ran03012]
D Riean_0220 translation initiation factor 1 (eIF-1/SUI1) K03113 EIF1; translation initiation factor 1
D Riean_1302 bacterial translation initiation factor 2 (bIF-2) K02519 infB; translation initiation factor IF-2
D Riean_0242 bacterial translation initiation factor 3 (bIF-3) K02520 infC; translation initiation factor IF-3
D Riean_0704 ABC transporter related protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D Riean_0842 translation elongation factor Ts (EF-Ts) K02357 tsf; elongation factor Ts
D Riean_1507 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu
D Riean_1394 translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G
D Riean_1024 bacterial peptide chain release factor 1 (bRF-1) K02835 prfA; peptide chain release factor 1
D Riean_1991 ribosome recycling factor K02838 frr; ribosome recycling factor
D Riean_0277 protein-(glutamine-N5) methyltransferase, release factor-specific K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D Riean_0848 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D Riean_0884 bacterial translation initiation factor 1 (bIF-1) K02518 infA; translation initiation factor IF-1
D Riean_0612 translation elongation factor P (EF-P) K02356 efp; elongation factor P
D Riean_1865 bacterial peptide chain release factor 2 (bRF-2) K02836 prfB; peptide chain release factor 2
D Riean_0399 bacterial peptide chain release factor 3 (bRF-3) K02837 prfC; peptide chain release factor 3
C 03110 Chaperones and folding catalysts [BR:ran03110]
D Riean_0847 ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D Riean_1173 ATPase AAA-2 domain protein K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D Riean_0583 Sigma 54 interacting domain protein K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D Riean_0464 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Riean_0374 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Riean_0668 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D Riean_0669 GrpE protein K03687 GRPE; molecular chaperone GrpE
D Riean_0494 heat shock protein Hsp15 K04762 hslR; ribosome-associated heat shock protein Hsp15
D Riean_0375 Chaperonin Cpn10 K04078 groES; chaperonin GroES
D Riean_0953 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D Riean_1231 ATP-dependent metalloprotease FtsH K08956 AFG3; AFG3 family protein [EC:3.4.24.-]
D Riean_0421 ATP synthase F0 subcomplex A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D Riean_0913 hydrogenase expression/synthesis HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D Riean_0912 hydrogenase accessory protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB
D Riean_0120 peptidase S8 and S53 subtilisin kexin sedolisin K13274 wprA; cell wall-associated protease [EC:3.4.21.-]
D Riean_0062 Peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D Riean_0991 PpiC-type peptidyl-prolyl cis-trans isomerase K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D Riean_1554 PpiC-type peptidyl-prolyl cis-trans isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D Riean_0479 thioredoxin K03671 TXN; thioredoxin
D Riean_1309 thioredoxin K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:ran04131]
D Riean_1707 Nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D Riean_0594 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Riean_0978 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Riean_0692 major facilitator superfamily MFS_1 K06902 UMF1; MFS transporter, UMF1 family
C 04121 Ubiquitin system
C 03051 Proteasome
C 03032 DNA replication proteins [BR:ran03032]
D Riean_0657 Ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D Riean_1558 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Riean_0529 bacterial nucleoid protein Hbs K03530 hupB; DNA-binding protein HU-beta
D Riean_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D Riean_0658 primary replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D Riean_1863 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D Riean_0321 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Riean_0623 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Riean_0378 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Riean_0133 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Riean_0087 DNA polymerase III subunits gamma and tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Riean_0550 Exonuclease RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Riean_1317 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Riean_0515 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Riean_0778 Ribonuclease H K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D Riean_0209 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Riean_1605 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D Riean_1788 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D Riean_1817 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D Riean_0318 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D Riean_0320 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D Riean_0226 DNA topoisomerase (ATP-hydrolyzing) K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D Riean_0224 DNA topoisomerase type IIA subunit B region 2 domain protein K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D Riean_1216 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:ran03036]
D Riean_0980 RNAse III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D Riean_1558 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Riean_0529 bacterial nucleoid protein Hbs K03530 hupB; DNA-binding protein HU-beta
D Riean_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D Riean_1386 Ferritin Dps family protein K04047 dps; starvation-inducible DNA-binding protein
D Riean_0831 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D Riean_1038 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D Riean_1007 ABC transporter related protein K09812 ftsE; cell division transport system ATP-binding protein
D Riean_1046 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D Riean_0131 cell division protein FtsK/SpoIIIE K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D Riean_1039 cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D Riean_1042 cell cycle protein K03588 ftsW; cell division protein FtsW
D Riean_0012 cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D Riean_1037 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Riean_0222 hypothetical protein K09888 zapA; cell division protein ZapA
D Riean_0870 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Riean_1915 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Riean_1108 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Riean_1016 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Riean_1348 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D Riean_1349 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D Riean_1464 GtrA family protein K03571 mreD; rod shape-determining protein MreD
D Riean_1352 cell cycle protein K05837 rodA; rod shape determining protein RodA
D Riean_0126 ParA-like ATPase K03496 parA; chromosome partitioning protein
D Riean_0125 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Riean_0226 DNA topoisomerase (ATP-hydrolyzing) K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D Riean_0224 DNA topoisomerase type IIA subunit B region 2 domain protein K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D Riean_1102 glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D Riean_0382 16S rRNA m(7)G-527 methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D Riean_1504 integrase family protein K03733 xerC; integrase/recombinase XerC
D Riean_1420 tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D Riean_0325 integrase family protein K04763 xerD; integrase/recombinase XerD
D Riean_1247 integrase family protein K04763 xerD; integrase/recombinase XerD
D Riean_0806 ATPase-like, ParA/MinD K03593 mrp; ATP-binding protein involved in chromosome partitioning
D Riean_1121 filamentation induced by cAMP protein Fic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D Riean_0168 filamentation induced by cAMP protein Fic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D Riean_1051 ribosome biogenesis GTP-binding protein YsxC K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:ran03400]
D Riean_0430 methylated-DNA/protein-cysteinemethyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D Riean_1710 Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D Riean_1557 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D Riean_0841 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D Riean_0237 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D Riean_0602 exodeoxyribonuclease III Xth K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D Riean_0866 exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Riean_1605 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D Riean_0209 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Riean_0284 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D Riean_1885 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D Riean_1252 excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B
D Riean_1413 excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D Riean_0208 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Riean_1519 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D Riean_1520 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D Riean_0879 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D Riean_1654 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D Riean_1223 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D Riean_0587 DNA mismatch repair protein MutS domain protein K07456 mutS2; DNA mismatch repair protein MutS2
D Riean_1076 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D Riean_0623 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Riean_0378 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Riean_0133 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Riean_0087 DNA polymerase III subunits gamma and tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Riean_0550 Exonuclease RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Riean_1317 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Riean_0515 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Riean_0321 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Riean_1788 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D Riean_1817 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D Riean_0781 recA protein K03553 recA; recombination protein RecA
D Riean_0834 Holliday junction DNA helicase subunit RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D Riean_1417 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D Riean_0829 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D Riean_0467 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D Riean_0816 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D Riean_0406 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D Riean_0496 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Riean_0202 recombination protein RecR K06187 recR; recombination protein RecR
D Riean_1318 DNA replication and repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D Riean_0794 CRISPR-associated protein, Cas1 family K15342 cas1; CRISP-associated protein Cas1
D Riean_1316 protein of unknown function DUF853 NPT hydrolase K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D Riean_0318 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D Riean_0320 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D Riean_1216 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D Riean_1558 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Riean_0529 bacterial nucleoid protein Hbs K03530 hupB; DNA-binding protein HU-beta
D Riean_0628 ATP-dependent DNA helicase, RecQ family K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D Riean_0101 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D Riean_0782 DNA-directed DNA polymerase K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D Riean_1956 DNA-damage-inducible protein K14623 dinD; DNA-damage-inducible protein D
D Riean_0762 regulatory protein RecX K03565 recX; regulatory protein
D Riean_0821 ribonucleoside-diphosphate reductase, alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Riean_0822 ribonucleotide reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D Riean_R0027 phosphoesterase RecJ domain protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:ran03029]
D Riean_1302 bacterial translation initiation factor 2 (bIF-2) K02519 infB; translation initiation factor IF-2
D Riean_0242 bacterial translation initiation factor 3 (bIF-3) K02520 infC; translation initiation factor IF-3
D Riean_0842 translation elongation factor Ts (EF-Ts) K02357 tsf; elongation factor Ts
D Riean_1507 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu
D Riean_1394 translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G
D Riean_0214 GTP-binding protein Era K03595 era; GTPase
D Riean_0649 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Riean_0951 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Riean_0192 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Riean_1377 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D Riean_0775 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Riean_0321 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Riean_1061 outer membrane protein assembly complex, YaeT protein K07277 SAM50; outer membrane protein insertion porin family
D Riean_0464 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Riean_0669 GrpE protein K03687 GRPE; molecular chaperone GrpE
D Riean_0374 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Riean_0375 Chaperonin Cpn10 K04078 groES; chaperonin GroES
D Riean_0668 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D Riean_0480 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Riean_0797 ferredoxin K22071 FDX2; ferredoxin-2, mitochondrial
D Riean_1406 nitrogen-fixing NifU domain protein K22074 NFU1; NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
D Riean_0806 ATPase-like, ParA/MinD K03593 mrp; ATP-binding protein involved in chromosome partitioning
D Riean_0779 protein translocase subunit yidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:ran02000]
D Riean_1475 ABC transporter related protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D Riean_0941 ABC transporter related protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D Riean_1634 ABC transporter related protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D Riean_1523 ABC transporter related protein K15738 uup; ABC transport system ATP-binding/permease protein
D Riean_0990 Mammalian cell entry related domain protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D Riean_0637 protein of unknown function DUF140 K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D Riean_0638 ABC transporter related protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D Riean_0924 periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D Riean_0923 transport system permease protein K02015 ABC.FEV.P; iron complex transport system permease protein
D Riean_0922 ABC transporter related protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D Riean_0390 periplasmic binding protein K25034 btuF; cobalamin transport system substrate-binding protein
D Riean_0440 transport system permease protein K25027 btuC; cobalamin transport system permease protein
D Riean_0441 ABC transporter related protein K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8]
D Riean_0128 permease YjgP/YjgQ family protein K07091 lptF; lipopolysaccharide export system permease protein
D Riean_1228 permease YjgP/YjgQ family protein K11720 lptG; lipopolysaccharide export system permease protein
D Riean_1697 ABC transporter related protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D Riean_1669 nitrous oxide reductase maturation transmembrane protein NosY K19341 nosY; Cu-processing system permease protein
D Riean_1670 ABC transporter related protein K19340 nosF; Cu-processing system ATP-binding protein
D Riean_0098 protein involved in gliding motility GldF K25151 gldF; gliding motility-associated transport system permease protein
D Riean_1635 protein involved in gliding motility GldA K25152 gldA; gliding motility-associated transport system ATP-binding protein
D Riean_0099 protein involved in gliding motility GldG K25153 gldG; gliding motility-associatede transport system auxiliary component
D Riean_1584 protein of unknown function DUF214 K09808 lolC_E; lipoprotein-releasing system permease protein
D Riean_0544 protein of unknown function DUF214 K09808 lolC_E; lipoprotein-releasing system permease protein
D Riean_0520 ABC transporter related protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D Riean_0012 cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D Riean_1007 ABC transporter related protein K09812 ftsE; cell division transport system ATP-binding protein
D Riean_0666 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D Riean_0197 putative transmembrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D Riean_0667 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Riean_1191 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Riean_1139 FeS assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D Riean_1866 MATE efflux family protein K26939 norM; MATE family, multidrug efflux pump
D Riean_1462 major facilitator superfamily MFS_1 K02429 fucP; MFS transporter, FHS family, L-fucose permease
D Riean_1894 nucleoside transporter K11537 xapB; MFS transporter, NHS family, xanthosine permease
D Riean_0423 major facilitator superfamily MFS_1 K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein
D Riean_0692 major facilitator superfamily MFS_1 K06902 UMF1; MFS transporter, UMF1 family
D Riean_0400 Ion transport protein K10716 kch; voltage-gated potassium channel
D Riean_1771 von Willebrand factor type A K07114 yfbK; Ca-activated chloride channel homolog
D Riean_1772 von Willebrand factor type A K07114 yfbK; Ca-activated chloride channel homolog
D Riean_1869 large conductance mechanosensitive channel protein K03282 mscL; large conductance mechanosensitive channel
D Riean_0147 MscS Mechanosensitive ion channel K03442 mscS; small conductance mechanosensitive channel
D Riean_0572 MscS Mechanosensitive ion channel K16053 ybdG; miniconductance mechanosensitive channel
D Riean_0014 magnesium transporter K06213 mgtE; magnesium transporter
D Riean_1353 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D Riean_0931 outer membrane transport energization protein ExbB K03561 exbB; biopolymer transport protein ExbB
D Riean_0950 outer membrane transport energization protein ExbB K03561 exbB; biopolymer transport protein ExbB
D Riean_0932 outer membrane transport energization protein ExbD K03559 exbD; biopolymer transport protein ExbD
D Riean_0022 Mg2 transporter protein CorA family protein K03284 corA; magnesium transporter
D Riean_1908 camphor resistance protein CrcB K06199 crcB; fluoride exporter
D Riean_0034 hypothetical protein K08994 yneE; ion channel-forming bestrophin family protein
D Riean_0415 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family
D Riean_0210 hypothetical protein K16079 omp31; outer membrane immunogenic protein
D Riean_1610 phosphate-selective porin O and P K07221 oprO_P; phosphate-selective porin OprO and OprP
D Riean_0575 OmpA/MotB domain protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D Riean_0576 OmpA/MotB domain protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D Riean_1027 OmpA/MotB domain protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D Riean_1256 membrane protein involved in aromatic hydrocarbon degradation K06076 fadL; long-chain fatty acid transport protein
D Riean_1012 TonB-dependent receptor plug K19611 fepA; ferric enterobactin receptor
D Riean_0811 TonB-dependent receptor K16091 fecA; Fe(3+) dicitrate transport protein
D Riean_1757 TonB-dependent receptor K16091 fecA; Fe(3+) dicitrate transport protein
D Riean_1899 TonB-dependent receptor K16092 btuB; vitamin B12 transporter
D Riean_0024 TonB-dependent receptor plug K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D Riean_1735 TonB-dependent receptor plug K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D Riean_0557 TonB-dependent receptor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D Riean_1358 TonB-dependent receptor plug K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D Riean_1011 TonB-dependent receptor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D Riean_1522 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Riean_1542 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Riean_0597 TonB-dependent receptor plug K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Riean_1345 TonB-dependent receptor plug K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Riean_1607 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Riean_0921 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Riean_0431 TonB-dependent receptor plug K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Riean_0294 outer membrane efflux protein K15725 czcC; outer membrane protein, heavy metal efflux system
D Riean_1017 outer membrane efflux protein K12340 tolC; outer membrane protein
D Riean_1110 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D Riean_0760 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D Riean_1061 outer membrane protein assembly complex, YaeT protein K07277 SAM50; outer membrane protein insertion porin family
D Riean_1340 outer membrane assembly lipoprotein YfiO K05807 bamD; outer membrane protein assembly factor BamD
D Riean_1032 AsmA family protein K09800 tamB; translocation and assembly module TamB
D Riean_0521 hypothetical protein K21449 ata; trimeric autotransporter adhesin
D Riean_0522 LrgA family protein K06518 cidA; holin-like protein
D Riean_0471 zinc/iron permease K16267 zipB; zinc and cadmium transporter
D Riean_0293 heavy metal efflux pump, CzcA family K15726 czcA; heavy metal efflux system protein
D Riean_0473 small multidrug resistance protein K11741 sugE; quaternary ammonium compound-resistance protein SugE
D Riean_0228 sodium/proton antiporter, NhaA family K03313 nhaA; Na+:H+ antiporter, NhaA family
D Riean_0359 potassium/proton antiporter, CPA1 family K11105 cvrA; potassium/hydrogen antiporter
D Riean_1898 potassium efflux system protein K11747 kefB; glutathione-regulated potassium-efflux system protein KefB
D Riean_1897 NAD(P)H dehydrogenase (quinone) K11748 kefG; glutathione-regulated potassium-efflux system ancillary protein KefG
D Riean_1877 H(+)-transporting two-sector ATPase K03498 trkH; trk/ktr system potassium uptake protein
D Riean_1876 TrkA-N domain protein K03499 trkA; trk/ktr system potassium uptake protein
D Riean_0463 Cl-channel voltage-gated family protein K03281 clcA; chloride channel protein, CIC family
D Riean_0670 Mn2+/Fe2+ transporter, NRAMP family K03322 mntH; manganese transport protein
D Riean_1616 potassium transporter K03549 kup; KUP system potassium uptake protein
D Riean_0297 protein of unknown function DUF125 transmembrane K22736 VIT; vacuolar iron transporter family protein
D Riean_1775 multiple antibiotic resistance (MarC)-related protein K05595 marC; multiple antibiotic resistance protein
D Riean_1042 cell cycle protein K03588 ftsW; cell division protein FtsW
D Riean_0947 outer membrane transport energization protein TonB K03832 tonB; periplasmic protein TonB
D Riean_0127 TonB family protein K03832 tonB; periplasmic protein TonB
D Riean_0295 efflux transporter, RND family, MFP subunit K15727 czcB; membrane fusion protein, heavy metal efflux system
D Riean_1108 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Riean_1016 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Riean_0759 capsular exopolysaccharide family K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D Riean_1222 protein involved in gliding motility EpsB K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D Riean_1093 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Riean_1562 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Riean_1734 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Riean_1304 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Riean_0833 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Riean_1749 hypothetical protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Riean_0046 hypothetical protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Riean_0025 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Riean_1746 nicotinamide mononucleotide transporter PnuC K03811 pnuC; nicotinamide mononucleotide transporter
D Riean_1293 FeoA family protein K04758 feoA; ferrous iron transport protein A
D Riean_1294 ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D Riean_1137 hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
D Riean_0369 hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
D Riean_0115 hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
C 02044 Secretion system [BR:ran02044]
D Riean_1017 outer membrane efflux protein K12340 tolC; outer membrane protein
D Riean_1421 CMP/dCMP deaminase zinc-binding protein K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D Riean_0786 ComEC/Rec2-related protein K02238 comEC; competence protein ComEC
D Riean_0823 phosphoribosyltransferase K02242 comFC; competence protein ComFC
D Riean_1343 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Riean_0360 protein translocase subunit secF; protein translocase subunit secD K12257 secDF; SecD/SecF fusion protein
D Riean_1508 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D Riean_0204 protein translocase subunit secG K03075 secG; preprotein translocase subunit SecG
D Riean_0885 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY
D Riean_0275 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Riean_1214 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Riean_1430 protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC
D Riean_0779 protein translocase subunit yidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Riean_1451 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA
D Riean_1452 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA
D Riean_0103 Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:ran02042]
D Riean_0415 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family
C 02022 Two-component system [BR:ran02022]
D Riean_1145 integral membrane sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D Riean_1651 two component transcriptional regulator, winged helix family K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D Riean_1271 signal transduction histidine kinase, LytS K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D Riean_1272 two component transcriptional regulator, LytTR family K02477 K02477; two-component system, LytTR family, response regulator
D Riean_1663 response regulator receiver protein K07720 yesN; two-component system, response regulator YesN
C 02035 Bacterial motility proteins [BR:ran02035]
D Riean_1353 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:ran04812]
D Riean_1348 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D Riean_1037 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Riean_1038 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D Riean_0126 ParA-like ATPase K03496 parA; chromosome partitioning protein
D Riean_0125 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:ran04147]
D Riean_0874 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Riean_0594 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Riean_1089 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D Riean_0978 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Riean_0062 Peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D Riean_0107 alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D Riean_0374 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Riean_0464 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Riean_0764 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Riean_0729 peptidase S9B dipeptidylpeptidase IV domain protein K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D Riean_1719 peptidase S9B dipeptidylpeptidase IV domain protein K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D Riean_1474 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D Riean_1507 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu
D Riean_0582 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D Riean_0398 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Riean_0642 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Riean_0693 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Riean_0077 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D Riean_1202 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D Riean_0663 fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D Riean_0618 D-fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D Riean_1275 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Riean_0631 Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D Riean_0661 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D Riean_0546 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D Riean_1733 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D Riean_0149 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Riean_1573 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Riean_0282 IMP cyclohydrolase; phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D Riean_0665 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Riean_0476 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Riean_1892 Electron transfer flavoprotein alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit
D Riean_0266 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Riean_0971 Serum amyloid A protein K17310 SAA; serum amyloid A protein
C 02048 Prokaryotic defense system [BR:ran02048]
D Riean_0794 CRISPR-associated protein, Cas1 family K15342 cas1; CRISP-associated protein Cas1
D Riean_0793 CRISPR-associated protein, Cas2 family K09951 cas2; CRISPR-associated protein Cas2
D Riean_1731 Type I site-specific deoxyribonuclease K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D Riean_1730 restriction modification system DNA specificity domain K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D Riean_1729 N-6 DNA methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D Riean_1818 Type II site-specific deoxyribonuclease K01155 E3.1.21.4; type II restriction enzyme [EC:3.1.21.4]
D Riean_1467 Type II site-specific deoxyribonuclease K01155 E3.1.21.4; type II restriction enzyme [EC:3.1.21.4]
D Riean_1788 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D Riean_1817 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D Riean_1789 Site-specific DNA-methyltransferase (adenine-specific) K07318 K07318; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D Riean_1819 DNA methylase N-4/N-6 domain protein K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D Riean_1851 ATPase associated with various cellular activities AAA_5 K07452 mcrB; 5-methylcytosine-specific restriction enzyme B [EC:3.1.21.-]
D Riean_0470 restriction endonuclease K07448 mrr; restriction system protein
D Riean_1833 addiction module toxin, Txe/YoeB family K19158 yoeB; toxin YoeB [EC:3.1.-.-]
D Riean_1832 prevent-host-death family protein K19159 yefM; antitoxin YefM
D Riean_1806 transcriptional regulator, XRE family K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D Riean_1923 Protein of unknown function DUF2136 K19166 higB; mRNA interferase HigB [EC:3.1.-.-]
D Riean_1924 helix-turn-helix domain protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D Riean_1037 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Riean_1348 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D Riean_0226 DNA topoisomerase (ATP-hydrolyzing) K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D Riean_0224 DNA topoisomerase type IIA subunit B region 2 domain protein K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D Riean_0480 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Riean_0553 sulfurtransferase DndC K19170 dndC; DNA sulfur modification protein DndC
D Riean_0554 DNA sulfur modification protein DndD K19171 dndD; DNA sulfur modification protein DndD
D Riean_0555 Domain of unknown function DUF1832 K19172 dndE; DNA sulfur modification protein DndE
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:ran04090]
D Riean_0729 peptidase S9B dipeptidylpeptidase IV domain protein K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D Riean_1719 peptidase S9B dipeptidylpeptidase IV domain protein K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
C 01504 Antimicrobial resistance genes [BR:ran01504]
D Riean_0423 major facilitator superfamily MFS_1 K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein
D Riean_0474 peptidase M56 BlaR1 K02172 blaR1; bla regulator protein blaR1
D Riean_0504 Penicillinase repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D Riean_0475 transcriptional repressor, CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D Riean_1108 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Riean_1016 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Riean_1110 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D Riean_1017 outer membrane efflux protein K12340 tolC; outer membrane protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:ran00537]
D Riean_0546 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D Riean_1733 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:ran03100]
D Riean_R0020 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Riean_R0030 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Riean_R0046 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Riean_R0002 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Riean_R0001 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Riean_R0012 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Riean_R0003 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Riean_R0033 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D Riean_R0006 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D Riean_R0007 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D Riean_R0023 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D Riean_R0049 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Riean_R0025 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Riean_R0024 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Riean_R0035 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Riean_R0041 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Riean_R0026 tRNA-His K14226 tRNA-His; tRNA His
D Riean_R0021 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Riean_R0045 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Riean_R0031 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Riean_R0009 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Riean_R0051 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Riean_R0036 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Riean_R0034 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Riean_R0008 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Riean_R0010 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Riean_R0004 tRNA-Met K14230 tRNA-Met; tRNA Met
D Riean_R0011 tRNA-Met K14230 tRNA-Met; tRNA Met
D Riean_R0015 tRNA-Met K14230 tRNA-Met; tRNA Met
D Riean_R0016 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D Riean_R0013 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Riean_R0014 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Riean_R0052 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Riean_R0005 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Riean_R0042 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Riean_R0039 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Riean_R0043 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D Riean_R0040 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D Riean_R0038 tRNA-Val K14237 tRNA-Val; tRNA Val
D Riean_R0037 tRNA-Val K14237 tRNA-Val; tRNA Val
D Riean_R0022 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Riean_R0032 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Riean_R0044 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Riean_R0019 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Riean_R0047 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Riean_R0029 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Riean_R0018 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Riean_R0028 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Riean_R0048 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Riean_R0050 RNA component of signal recognition particle K01983 ffs; SRP RNA
D Riean_R0017 RNA component of RNaseP K01978 rnpB; M1 RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D Riean_0081 FAD linked oxidase domain protein K16653 dprE1; decaprenylphospho-beta-D-ribofuranose 2-oxidase [EC:1.1.98.3]
D Riean_1053 peptide methionine sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D Riean_1080 methionine-R-sulfoxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D Riean_0701 Cytochrome-c peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D Riean_0254 Cytochrome-c peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D Riean_0840 alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D Riean_0708 thiol peroxidase (atypical 2-Cys peroxiredoxin) K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D Riean_1664 Pirin domain protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D Riean_1418 Ferroxidase K02217 ftnA; ferritin [EC:1.16.3.2]
D Riean_0181 arsenate reductase and related protein K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D Riean_0351 arsenate reductase and related protein K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D Riean_0336 Protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D Riean_1382 spermine/spermidine N-acetyltransferase K22441 paiA; diamine N-acetyltransferase [EC:2.3.1.57]
D Riean_1411 apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D Riean_0134 glutamine cyclotransferase K22757 QCT; glutaminyl-peptide cyclotransferase [EC:2.3.2.5]
D Riean_1295 leucyl/phenylalanyl-tRNA/protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D Riean_1457 glycosyl transferase group 1 K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-]
D Riean_0802 homospermidine synthase (spermidine-specific) K00809 DHPS; deoxyhypusine synthase [EC:2.5.1.46]
D Riean_1870 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D Riean_0383 Glyoxalase/bleomycin resistance protein/dioxygenase K11210 fosB; metallothiol transferase [EC:2.5.1.-]
D Riean_1683 ApbE family lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D Riean_2001 thioesterase superfamily protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D Riean_1058 thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D Riean_1324 hypothetical protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D Riean_0079 hydrolase, TatD family K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D Riean_1333 TatD-related deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D Riean_0570 alpha/beta hydrolase fold protein K01175 ybfF; esterase [EC:3.1.-.-]
D Riean_1656 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D Riean_0943 LmbE family protein K01463 bshB1; N-acetylglucosamine malate deacetylase 1 [EC:3.5.1.-]
D Riean_0872 endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D Riean_1768 ATPase associated with various cellular activities AAA_3 K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D Riean_1712 cytoplasmic peptidoglycan synthetase domain protein K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D Riean_1374 hypothetical protein K00350 nqrE; Na+-transporting NADH:ubiquinone oxidoreductase subunit E [EC:7.2.1.1]
C 99981 Carbohydrate metabolism
D Riean_1306 protein of unknown function UCP012535 K22136 bshC; bacillithiol synthase
C 99982 Energy metabolism
D Riean_0955 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein K05337 fer; ferredoxin
D Riean_1891 Electron transfer flavoprotein alpha/beta-subunit K03521 fixA; electron transfer flavoprotein beta subunit
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D Riean_0644 Glyoxalase/bleomycin resistance protein/dioxygenase K08234 yaeR; glyoxylase I family protein
D Riean_1868 alanine racemase domain protein K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D Riean_0527 integral membrane protein K07027 K07027; glycosyltransferase 2 family protein
C 99987 Cofactor metabolism
C 99988 Secondary metabolism
C 99999 Others
D Riean_0218 metallophosphoesterase K22390 ACP7; acid phosphatase type 7
D Riean_0648 phospholipase/Carboxylesterase K06999 K06999; phospholipase/carboxylesterase
D Riean_1361 protein of unknown function DUF1094 K26958 brxA_B; bacilliredoxin
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D Riean_0306 Barstar (barnase inhibitor) K03623 yhcO; ribonuclease inhibitor
D Riean_0450 cold-shock DNA-binding protein family K03704 cspA; cold shock protein
D Riean_1954 phage antirepressor protein K07741 antB; anti-repressor protein
D Riean_0171 AntA/AntB antirepressor domain protein K07741 antB; anti-repressor protein
D Riean_1929 AntA/AntB antirepressor domain protein K07741 antB; anti-repressor protein
D Riean_0588 Tex-like protein K06959 tex; protein Tex
C 99974 Translation
C 99975 Protein processing
D Riean_0376 protein of unknown function DUF306 Meta and HslJ K03668 hslJ; heat shock protein HslJ
D Riean_0414 ATP-dependent Clp protease adaptor protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D Riean_0600 trigger factor K03545 tig; trigger factor
D Riean_0917 UreE urease accessory domain-containing protein K03187 ureE; urease accessory protein
D Riean_0916 Urease accessory protein UreF K03188 ureF; urease accessory protein
D Riean_0915 urease accessory protein UreG K03189 ureG; urease accessory protein
D Riean_0914 Urease accessory protein UreD K03190 ureD; urease accessory protein
D Riean_1028 SsrA-binding protein K03664 smpB; SsrA-binding protein
D Riean_0487 AIR synthase related protein domain protein K04655 hypE; hydrogenase expression/formation protein HypE
D Riean_1262 Mg chelatase, subunit ChlI K07391 comM; magnesium chelatase family protein
D Riean_1025 OsmC family protein K07397 yhfA; putative redox protein
C 99976 Replication and repair
D Riean_0519 DNA repair protein RadC K03630 radC; DNA repair protein RadC
D Riean_1384 protein of unknown function DUF195 K09760 rmuC; DNA recombination protein RmuC
D Riean_1269 Uncharacterized protein family UPF0102 K07460 yraN; putative endonuclease
D Riean_0827 DNA protecting protein DprA K04096 smf; DNA processing protein
D Riean_1946 phage terminase, large subunit, PBSX family K06909 xtmB; phage terminase large subunit
D Riean_1872 AAA ATPase central domain protein K07478 ycaJ; putative ATPase
D Riean_1486 3'-5' exonuclease, PolB K07501 K07501; 3'-5' exonuclease
D Riean_1597 IS1 transposase K07480 insB; insertion element IS1 protein InsB
D Riean_0138 hypothetical protein K07488 K07488; transposase
D Riean_0198 hypothetical protein K07488 K07488; transposase
C 99979 Viral proteins
C 99998 Others
D Riean_1602 phage shock protein A, PspA K03969 pspA; phage shock protein A
D Riean_1310 Rhodanese domain protein K03972 pspE; phage shock protein E
D Riean_1312 Rhodanese domain protein K03972 pspE; phage shock protein E
D Riean_1588 Rhodanese domain protein K03972 pspE; phage shock protein E
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D Riean_1745 amino acid/polyamine/organocation transporter, APC superfamily K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D Riean_1998 amino acid/polyamine/organocation transporter, APC superfamily K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D Riean_1015 acriflavin resistance protein K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D Riean_1109 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D Riean_1608 amino acid/peptide transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D Riean_1737 amino acid/peptide transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D Riean_0507 phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
C 99978 Cell growth
D Riean_1680 iron-sulfur cluster repair di-iron protein K07322 ytfE; regulator of cell morphogenesis and NO signaling
D Riean_1450 Peptidase M23 K22719 envC; murein hydrolase activator
C 99993 Cell motility
C 99995 Signaling proteins
D Riean_0258 GTP-binding protein TypA K06207 typA; GTP-binding protein
D Riean_0213 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
C 99992 Structural proteins
D Riean_1059 outer membrane chaperone Skp (OmpH) K06142 hlpA; outer membrane protein
D Riean_1060 outer membrane chaperone Skp (OmpH) K06142 hlpA; outer membrane protein
D Riean_0810 glycoside hydrolase family 25 K07273 acm; lysozyme
C 99994 Others
D Riean_0338 Integral membrane protein TerC K05794 terC; tellurite resistance protein TerC
D Riean_1671 nitrous oxide reductase maturation protein NosD K07218 nosD; nitrous oxidase accessory protein
D Riean_1672 lipoprotein, putative K19342 nosL; copper chaperone NosL
B
B 09194 Poorly characterized
C 99996 General function prediction only
D Riean_1052 GCN5-related N-acetyltransferase K02348 elaA; ElaA protein
D Riean_0809 transport-associated protein K04065 osmY; hyperosmotically inducible periplasmic protein
D Riean_0828 hypothetical protein K06886 glbN; hemoglobin
D Riean_1104 Patatin K07001 K07001; NTE family protein
D Riean_1265 HAD-superfamily hydrolase, subfamily IA, variant 1 K07025 K07025; putative hydrolase of the HAD superfamily
D Riean_1133 Iron-regulated ABC transporter membrane component SufB K09014 sufB; Fe-S cluster assembly protein SufB
D Riean_1140 FeS assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D Riean_1034 ribonuclease BN K07058 K07058; membrane protein
D Riean_1901 ribonuclease BN K07058 K07058; membrane protein
D Riean_1175 Cysteine desulfuration protein SufE K02426 sufE; cysteine desulfuration protein SufE
D Riean_0368 protein of unknown function DUF336 K11477 glcG; glc operon protein GlcG
D Riean_0114 protein of unknown function DUF336 K11477 glcG; glc operon protein GlcG
D Riean_0732 LemA family protein K03744 lemA; LemA protein
D Riean_1129 protein of unknown function DUF218 K03748 sanA; SanA protein
D Riean_0437 protein of unknown function DUF218 K03748 sanA; SanA protein
D Riean_1864 SNARE associated Golgi protein-related protein K03975 dedA; membrane-associated protein
D Riean_0057 membrane protein of unknown function K08972 K08972; putative membrane protein
D Riean_1702 protein of unknown function DUF1304 K08987 K08987; putative membrane protein
D Riean_0498 alkylphosphonate utilization operon protein PhnA K06193 phnA; protein PhnA
D Riean_0367 protein of unknown function DUF417 K21741 rclC; reactive chlorine resistance protein C
C 99997 Function unknown
D Riean_0040 Ankyrin K06867 K06867; uncharacterized protein
D Riean_1686 Ankyrin K06867 K06867; uncharacterized protein
D Riean_0730 protein of unknown function DUF477 K06872 K06872; uncharacterized protein
D Riean_0942 PUR-alpha/beta/gamma DNA/RNA-binding protein K06884 K06884; uncharacterized protein
D Riean_0616 metal dependent phosphohydrolase K06885 K06885; uncharacterized protein
D Riean_0153 hypothetical protein K06890 K06890; uncharacterized protein
D Riean_1380 protein of unknown function UPF0153 K06940 K06940; uncharacterized protein
D Riean_0825 metal dependent phosphohydrolase K06950 K06950; uncharacterized protein
D Riean_0726 peptidase membrane zinc metallopeptidase K06973 K06973; uncharacterized protein
D Riean_1360 hypothetical protein K06975 K06975; uncharacterized protein
D Riean_1821 esterase K07017 K07017; uncharacterized protein
D Riean_1205 protein of unknown function zinc metallopeptidase K07054 K07054; uncharacterized protein
D Riean_0728 domain of unknown function DUF1731 K07071 K07071; uncharacterized protein
D Riean_0296 protein of unknown function DUF81 K07090 K07090; uncharacterized protein
D Riean_1314 protein of unknown function DUF81 K07090 K07090; uncharacterized protein
D Riean_1632 phosphodiesterase, MJ0936 family K07095 K07095; uncharacterized protein
D Riean_0038 metallophosphoesterase K07098 K07098; uncharacterized protein
D Riean_0402 protein of unknown function DUF164 K07164 K07164; uncharacterized protein
D Riean_1871 protein of unknown function DUF37 K08998 K08998; uncharacterized protein
D Riean_1893 protein of unknown function DUF151 K08999 K08999; uncharacterized protein
D Riean_0157 hypothetical protein K09158 K09158; uncharacterized protein
D Riean_0485 protein of unknown function DUF343 K09791 K09791; uncharacterized protein
D Riean_1489 heavy-metal-associated domain and membrane-bounded cytochrome biogenesis CycZ-like domain, possible membrane copper tolerance protein K09792 K09792; uncharacterized protein
D Riean_0573 protein of unknown function DUF456 K09793 K09793; uncharacterized protein
D Riean_0259 hypothetical protein K09794 K09794; uncharacterized protein
D Riean_0656 protein of unknown function DUF541 K09807 K09807; uncharacterized protein
D Riean_0180 hypothetical protein K00243 K00243; uncharacterized protein
D Riean_0278 protein of unknown function DUF328 K09861 K09861; uncharacterized protein
D Riean_1273 hypothetical protein K09940 K09940; uncharacterized protein
D Riean_1113 hypothetical protein K09954 K09954; uncharacterized protein
D Riean_0508 putative phosphate transport regulator K07220 K07220; uncharacterized protein
!
#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 20, 2024