| |
KO |
 Eukaryotic type
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SSBR (single strand breaks repair)
|
 Direct repair
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BER (base exicision repair)
|
 DNA glycosylases
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AP endonucleases
|
Long Patch-BER factors
|
DNA polymerase delta complex
DNA polymerase epsilon complex
AOA65_2300 pcn; DNA polymerase sliding clamp
AOA65_2414 fen_2; Flap endonuclease 1
AOA65_0602 fen_1; Flap endonuclease 1
AOA65_0957 lig_2; DNA ligase
AOA65_0724 lig_1; DNA ligase
|
K04802 PCNA; proliferating cell nuclear antigen
K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
|
Short Patch-BER factors
|
Other BER factors
|
NER (nucleotide excision repair)
|
GGR (global genome repair) factors
|
TCR (transcription coupled repair) factors
|
TFIIH complex
|
RPA (replication factor A)
|
Other NER factors
|
AOA65_0280 hypothetical protein
AOA65_1433 excinuclease ABC subunit C
AOA65_0957 lig_2; DNA ligase
AOA65_0724 lig_1; DNA ligase
|
K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
|
MMR (mismatch excision repair)
|
Mismatch and loop recognition factors
|
MutL homologs
|
DNA polymerase delta complex
|
RPA (replication factor A)
|
RFC (replication factor C)
|
Other MMR factors
|
AOA65_2300 pcn; DNA polymerase sliding clamp
AOA65_0957 lig_2; DNA ligase
AOA65_0724 lig_1; DNA ligase
|
K04802 PCNA; proliferating cell nuclear antigen
K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
|
DSBR (double strand breaks repair)
|
TLS (translesion DNA synthesis) factors
|
Check point factors
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Other factors with a suspected DNA repair function
|
|
|
Prokaryotic type
|
DNA Repair and Recombination Proteins - Candidatus Bathyarchaeota archaeon BA1