SSDB Best Search Result

Entry:gpb:HDN1F_22930 (1011 a.a.)
Name:Type III restriction enzyme, res subunit
KO:K01156 type III restriction enzyme

Search Result : 110 hits (reference genome only)

                 Entry                                       KO      len   SW-score  identity  overlap  
------------------------------------------------------------------ -------------------------------------
cte:CT0911 type III restriction system endonuclease     K01156     991     5209     0.785      1009    
bps:BPSL0043 type III restriction system endonuclease   K01156    1009     4604     0.682      1011    
bma:BMA2673 type III restriction-modification system, r K01156    1009     4597     0.682      1011    
dde:Dde_1742 Type III site-specific deoxyribonuclease   K01156     990     4278     0.656      1011    
smar:SM39_2668 type III restriction system endonuclease K01156     986     3534     0.558      1013    
cth:Cthe_0518 Type III site-specific deoxyribonuclease  K01156     991     3296     0.529      998     
fnu:FN0417 Type III restriction-modification system res K01156     997     2992     0.478      1009    
cja:CJA_1582 type III restriction system endonuclease   K01156    1003     2204     0.397      1015    
sat:SYN_01824 type III restriction-modification system  K01156    1025     1992     0.381      1061    
det:DET1114 type III restriction-modification system, r K01156    1019     1945     0.360      1051    
bfr:BF1142 type III restriction-modification system res K01156    1010     1943     0.376      1040    
pmu:PM0699 unknown                                      K01156    1043     1848     0.341      1072    
hdu:HD_1690 type III restriction enzyme                 K01156     876     1835     0.380      1025    
ral:Rumal_1091 Type III site-specific deoxyribonuclease K01156    1036     1802     0.355      1047    
apl:APL_0812 type III restriction enzyme                K01156     870     1783     0.376      1019    
tex:Teth514_1827 type III restriction enzyme, res subun K01156    1032     1608     0.342      1034    
lba:Lebu_0154 type III restriction protein res subunit  K01156    1022     1464     0.324      1044    
hpy:HP_0592 type III restriction enzyme R protein (res) K01156    1001     1018     0.292      986     
ftu:FTT_1579c Type III restriction enzyme               K01156     957      998     0.281      931     
hpj:jhp_1410 TYPE III RESTRICTION ENZYME                K01156     969      966     0.272      1030    
ngo:NGO_0546 restriction endonuclease EcoPI subunit R   K01156     979      896     0.265      1035    
nme:NMB1260 type III restriction-modification system Ec K01156     979      878     0.262      1032    
vg:2777489 Escherichia phage P1; type III restriction-m K01156     970      872     0.273      980     
senr:STMDT2_03541 type III restriction-modification sys K01156     991      679     0.259      972     
stm:STM0358 DNA restriction (DNA helicase)              K01156     990      679     0.259      972     
eba:ebA2417 hypothetical protein                        K01156     911      286     0.247      535     
neu:NE2306 conserved hypothetical protein               K01156     912      276     0.254      559     
mca:MCA0026 putative type III restriction-modification  K01156     882      257     0.239      532     
avn:Avin_52330 Type III restriction enzyme, res subunit K01156     923      238     0.252      536     
afr:AFE_0765 hypothetical protein                                   37      209     0.865      37      
dre:100329779 rho-associated protein kinase 1           K04514    1359      197     0.196      786     
cdi:DIP1894 Hypothetical protein                        K01156     865      186     0.232      478     
amj:102572451 Rho associated coiled-coil containing pro K17388    1303      182     0.206      848     
bpe:BP3117 putative restriction endonuclease            K01156    1039      171     0.225      565     
tru:101072534 coiled-coil domain-containing protein 93  K28962     637      167     0.206      548     
mtr:25496132 calponin homology domain-containing protei           2010      167     0.204      686     
pfr:PFREUD_21400 Putative type III restriction enzyme   K01156     857      154     0.286      105     
eam:EAMY_0850 type III restriction enzyme, res subunit  K01156     901      154     0.212      515     
rcu:8280108 flotillin-like protein 4                    K07192     481      153     0.199      408     
xau:Xaut_0549 type III restriction protein res subunit  K01156     890      152     0.270      259     
nca:Noca_1086 type III restriction enzyme, res subunit  K01156     840      152     0.239      356     
aag:5578293 clathrin heavy chain isoform X1             K04646    1681      150     0.204      626     
dme:Dmel_CG15812 uncharacterized protein, isoform A                518      149     0.237      410     
cpn:CPn_0891 Transcription-Repair Coupling              K03723    1085      149     0.214      529     
vvi:100264840 probable ATP-dependent DNA helicase CHR12           1103      148     0.226      305     
gme:Gmet_0675 hypothetical protein                      K01156     898      146     0.378      45      
mac:MA_1627 sensory transduction histidine kinase                  962      146     0.237      510     
tgu:778444 chromodomain-helicase-DNA-binding protein 1  K11367    1806      145     0.211      696     
aga:1272931 clathrin heavy chain isoform X2             K04646    1676      145     0.207      694     
wol:WD_1080 signal recognition particle protein         K03106     447      145     0.217      401     
mma:MM_2733 hypothetical protein                        K01153    1068      145     0.215      557     
sot:102603341 GTPase HflX                               K03665     547      143     0.232      462     
spu:105441782 probable ATP-dependent RNA helicase DHX58 K12647     840      142     0.229      376     
sma:SAVERM_4322 putative DNA gyrase subunit A           K02469     864      141     0.218      422     
sgu:SGLAU_17060 DNA gyrase subunit A                    K02469     864      140     0.211      422     
apla:101789385 protein phosphatase 1 regulatory subunit K07189    1180      140     0.272      169     
ppa:PAS_chr4_0393 Cytosolic leucyl tRNA synthetase, lig K01869    1097      140     0.202      366     
ehi:EHI_005910 Rho guanine nucleotide exchange factor              921      139     0.204      393     
rru:Rru_A0242 Type III restriction enzyme, res subunit  K01156    1014      138     0.236      229     
rcp:RCAP_rcc01261 type III restriction-modification sys K01156     869      137     0.239      297     
nve:5517843 synaptotagmin-1                                        481      137     0.219      311     
lma:LMJF_32_1910 hypothetical protein                              450      137     0.226      389     
pti:PHATRDRAFT_45898 hypothetical protein                          750      136     0.240      404     
rpa:TX73_003135 peptide chain release factor 1          K02835     361      136     0.224      246     
nta:107816369 uncharacterized protein LOC107816369      K03665     546      135     0.218      501     
sly:101261514 uncharacterized protein                   K03665     547      135     0.226      469     
cdf:CD630_26970 putative peptidase, M20D family         K14665     373      135     0.250      328     
ptr:452186 stabilin-2 isoform X1                        K19013    2596      135     0.242      252     
mja:MJ_0768 conserved hypothetical protein              K12234     249      135     0.250      184     
ocu:100343637 M-phase inducer phosphatase 3 isoform X1  K05867     483      134     0.224      459     
cge:100763604 coiled-coil domain-containing protein 83             408      133     0.207      347     
kla:KLLA0_B03850g uncharacterized protein                         1651      133     0.249      390     
sao:SAOUHSC_00954 UDP-N-acetylmuramoylalanyl-D-glutamat K05362     493      133     0.223      349     
sau:SA0876 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6- K05362     494      133     0.223      349     
pif:PITG_17617 TFIIH basal transcription factor complex K10843     820      132     0.270      211     
tgo:7893736 hypothetical protein                                   694      130     0.265      200     
rle:RL2473 putative methionyl-tRNA synthetase           K01874     516      130     0.217      221     
ser:SERP0607 UDP-N-acetylmuramoylalanyl-D-glutamate--2, K05362     494      130     0.230      318     
cpoc:100720096 probable ATP-dependent RNA helicase DDX4 K17043     647      129     0.214      266     
rfq:117020581 probable ATP-dependent RNA helicase DDX43 K17043     647      129     0.213      267     
hsa:55576 stabilin-2 precursor                          K19013    2551      129     0.238      252     
zga:ZOBELLIA_2120 Phospholipid/glycerol Acyltransferase            603      129     0.252      238     
fca:101097457 LOW QUALITY PROTEIN: DEAD box protein 53  K21869     724      128     0.241      270     
smm:Smp_178770 hypothetical protein                                342      128     0.220      173     
sai:Saci_0663 histidyl tRNA synthetase                  K01892     428      128     0.245      323     
ath:AT5G19210 P-loop containing nucleoside triphosphate            472      128     0.229      332     
rno:360823 ankyrin repeat domain-containing protein 13A K21437     589      128     0.226      328     
cin:100177486 uncharacterized protein LOC100177486                 247      127     0.223      206     
aor:AO090012000862 unnamed protein product; uncharacter            544      127     0.265      196     
fgr:FGSG_06063 hypothetical protein                                306      125     0.243      304     
xla:108699610 uncharacterized protein tdrd10.L isoform             656      125     0.245      441     
hal:VNG_2639G UDP-N-acetylglucosamine 2-epimerase                  457      125     0.236      411     
ola:101162638 ATP-binding cassette sub-family D member  K05677     657      124     0.221      448     
pfa:PF3D7_1454000 RNA-binding protein, putative         K12840     511      124     0.282      103     
sjp:SJA_C1-13570 LysR-family transcriptional regulator  K14057     306      123     0.279      179     
mse:Msed_0218 Uroporphyrinogen III synthase HEM4        K01719     224      122     0.260      127     
fvr:FVEG_02080 myo-inositol 2-dehydrogenase             K00010     353      121     0.214      234     
dne:112980340 mitochondrial ribonuclease P catalytic su K17655     586      120     0.261      134     
maj:MAA_06321 Ribosomal protein S1, RNA-binding domain  K03237     315      120     0.249      229     
ooe:OEOE_1046 NADH:flavin oxidoreductase, Old Yellow En            265      117     0.257      140     
wsu:WS1095 COMB2                                        K12049     309      117     0.206      286     
bja:bll2403 ORF_ID:bll2403; hypothetical protein        K07146     255      117     0.223      215     
pdi:BDI_2709 conserved hypothetical protein                        300      113     0.202      198     
tva:4768092 hypothetical protein                                   262      113     0.248      218     
sce:YOR062C uncharacterized protein                                268      112     0.241      228     
bbu:BB_T0008 Borrelia ORF-A superfamily protein                    368      112     0.234      171     
gmx:100795665 protein FAR1-RELATED SEQUENCE 5-like                 363      111     0.241      228     
cbo:CBO3529 putative RNA binding protein                K07571     134      108     0.287      115     
ban:BA_2766 putative lipoprotein                                   165      105     0.281      114     
sty:STY1727 putative pathogenicity island 2 secreted ef            127      104     0.279      129     

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