SSDB Best Search Result

Entry:rah:Rahaq_0170 (283 a.a.)
Name:Excinuclease ABC C subunit domain protein
KO:K05984 excinuclease Cho

Search Result : 250 hits (reference genome only)

                 Entry                                       KO      len   SW-score  identity  overlap  
------------------------------------------------------------------ -------------------------------------
smar:SM39_1332 excinuclease                             K05984     281     1042     0.563      261     
pam:PANA_1680 Cho                                       K05984     287     1013     0.536      263     
eam:EAMY_1634 putative excinuclease cho                 K05984     289     1000     0.526      270     
cro:ROD_13151 excinuclease Cho                          K05984     295      992     0.532      269     
esa:ESA_02150 hypothetical protein                      K05984     293      989     0.505      273     
ecs:ECs_2447 endonuclease of nucleotide excision repair K05984     295      974     0.515      272     
eco:b1741 excinuclease Cho                              K05984     295      973     0.515      272     
enc:ECL_02442 nucleotide excision repair endonuclease   K05984     292      968     0.484      281     
sfl:SF1485 nucleotide excision repair endonuclease      K05984     295      967     0.511      272     
sty:STY1804 conserved hypothetical protein              K05984     302      957     0.513      269     
stm:STM1309 putative nuclease subunit of the excinuclea K05984     302      957     0.513      269     
kpn:KPN_01227 endonuclease in nucleotide excision repai K05984     287      944     0.500      270     
avn:Avin_29310 Excinuclease ABC protein, subunit C      K05984     282      905     0.491      273     
xcc:XCC2427 excinuclease ABC subunit C homolog          K05984     285      836     0.481      270     
xac:XAC2558 excinuclease ABC subunit C homolog          K05984     284      828     0.474      270     
eba:ebA4628 Excinuclease Cho, similar to DNA polymerase K02342     478      693     0.417      278     
reh:H16_B0768 Exconuclease                              K02342     528      641     0.419      260     
reu:Reut_B3616 DNA polymerase III, epsilon subunit      K02342     530      639     0.409      264     
cvi:CV_1020 probable DNA-directed DNA polymerase III (e K02342     481      516     0.324      272     
dra:DR_1354 excinuclease ABC, subunit C                 K03703     617      310     0.293      198     
syn:sll0865 excinuclease ABC subunit C                  K03703     626      287     0.311      212     
mma:MM_3290 Excinuclease ABC, subunit C                 K03703     523      277     0.291      265     
mac:MA_3324 excinuclease ABC, subunit C                 K03703     516      277     0.288      267     
cac:CA_C3468 Excinuclease ABC, subunit C (uvrC)         K03703     373      274     0.265      275     
npu:Npun_R3957 excinuclease ABC, C subunit              K03703     625      272     0.333      192     
gvi:gll3592 ORF_ID:gll3592                              K03703     628      269     0.311      206     
pma:Pro_0954 Nuclease subunit of the excinuclease compl K03703     640      269     0.289      187     
anb:ANA_C11033 UvrABC system protein C UvrC             K03703     625      264     0.333      204     
zga:ZOBELLIA_1444 Excinuclease ABC, subunit C           K03703     595      261     0.305      190     
pgi:PG_1993 excinuclease ABC, C subunit                 K03703     599      260     0.291      203     
lin:lin0839 similar to excinuclease ABC, chain C (UvrC)            366      258     0.320      194     
syf:Synpcc7942_1945 Excinuclease ABC subunit C          K03703     643      256     0.306      216     
syc:syc2149_d excinuclease ABC subunit C                K03703     643      256     0.306      216     
lmo:lmo0846 excinuclease ABC subunit C                             366      256     0.321      193     
ava:Ava_4295 Excinuclease ABC subunit C                 K03703     627      255     0.318      214     
ana:alr2728 excinuclease ABC subunit C                  K03703     627      255     0.318      214     
tel:tlr1753 excinuclease ABC subunit C                  K03703     626      254     0.307      215     
pdi:BDI_2967 excinuclease ABC subunit C                 K03703     611      252     0.269      201     
ttm:Tthe_0631 excinuclease ABC, C subunit               K03703     617      251     0.286      199     
bth:BT_3266 excinuclease ABC subunit C                  K03703     609      251     0.276      196     
sno:Snov_2451 excinuclease ABC, C subunit               K03703     687      250     0.296      196     
mba:Mbar_A2709 Excinuclease ABC subunit C               K03703     519      250     0.297      195     
tte:TTE1966 Nuclease subunit of the excinuclease comple K03703     617      250     0.275      204     
bbu:BB_0457 excinuclease ABC, C subunit                 K03703     580      249     0.305      177     
syp:SYNPCC7002_A0237 excinuclease ABC, C subunit        K03703     623      248     0.294      218     
nmr:Nmar_1103 excinuclease ABC, C subunit               K03703     528      244     0.295      193     
dds:Ddes_0581 excinuclease ABC, C subunit               K03703     687      242     0.314      204     
mar:MAE_00230 excinuclease ABC subunit C                K03703     625      242     0.280      218     
alv:Alvin_1546 excinuclease ABC, C subunit              K03703     610      241     0.304      191     
mxa:MXAN_6124 GIY-YIG catalytic domain protein          K03703     404      239     0.322      205     
mta:Moth_0256 Excinuclease ABC subunit C                K03703     613      239     0.285      200     
elm:ELI_3621 excinuclease ABC subunit C                 K03703     632      238     0.267      202     
fps:FP0222 Excinuclease ABC, C subunit                  K03703     599      238     0.301      196     
hma:rrnAC3041 UvrABC system protein C                   K03703     581      238     0.321      184     
bme:BMEI1251 excinuclease abc subunit c                 K03703     685      238     0.272      217     
hvo:HVO_3006 UvrABC system protein C                    K03703     579      237     0.311      180     
azc:AZC_3966 excinuclease ABC C subunit                 K03703     718      237     0.279      204     
ooe:OEOE_1073 Excinuclease ABC subunit C                K03703     607      236     0.292      178     
bmf:BAB1_0720 Excinuclease ABC, C subunit, N-terminal:H K03703     611      235     0.276      210     
chy:CHY_0267 excinuclease ABC, C subunit                K03703     607      235     0.303      185     
tde:TDE_2478 excinuclease ABC, C subunit                K03703     652      235     0.281      178     
bms:BR0699 excinuclease ABC, C subunit                  K03703     611      235     0.276      210     
xau:Xaut_2344 excinuclease ABC, C subunit               K03703     779      234     0.279      208     
mth:MTH_441 excinuclease ABC subunit C                  K03703     579      234     0.438      96      
mpn:MPN_125 excinuclease ABC subunit C                  K03703     586      234     0.297      192     
cte:CT1807 excinuclease ABC, subunit C                  K03703     626      234     0.278      205     
gme:Gmet_3228 excinuclease ABC, C subunit               K03703     614      233     0.284      194     
ccr:CC_2881 excinuclease ABC, subunit C                 K03703     640      233     0.286      213     
ral:Rumal_2463 excinuclease ABC, C subunit              K03703     614      232     0.270      204     
dvu:DVU_0801 excinuclease ABC, C subunit                K03703     702      232     0.312      199     
mmg:MTBMA_c08370 excinuclease ABC, subunit C            K03703     579      231     0.327      171     
nme:NMB1326 excinuclease ABC, subunit C                 K03703     617      230     0.251      203     
bps:BPSL2556 possible DNA polymerase/helicase           K02342     381      229     0.442      86      
sme:SMc00602 Probable excinuclease ABC subunit C        K03703     674      229     0.286      224     
mlo:mlr7912 excinuclease ABC subunit C                  K03703     688      229     0.267      221     
acb:A1S_0310 EsvL                                       K03703     602      228     0.248      242     
bfr:BF0098 excinuclease ABC subunit C                   K03703     608      228     0.273      187     
cth:Cthe_2737 excinuclease ABC, C subunit               K03703     625      227     0.260      200     
tma:TM0265 excinuclease ABC, subunit C                  K03703     557      227     0.285      200     
aci:ACIAD0340 excinuclease ABC subunit C; UvrC with Uvr K03703     599      226     0.265      200     
ljo:LJ_1070 excinuclease ABC subunit C                  K03703     600      225     0.274      197     
lpl:lp_2109 excinuclease ABC, subunit C                 K03703     604      225     0.286      199     
smu:SMU_1241 putative excinuclease ABC (subunit C)      K03703     595      225     0.285      200     
mea:Mex_1p3083 DNA exisiton repair enzyme together with K03703     682      224     0.276      225     
stp:Strop_3286 DNA polymerase III, epsilon subunit      K02342     607      224     0.274      201     
dsy:DSY1229 hypothetical protein                        K03703     376      224     0.295      193     
sro:Sros_2682 DNA-directed DNA polymerase               K02342     574      223     0.276      199     
bvu:BVU_1212 excinuclease ABC subunit C                 K03703     606      223     0.245      196     
sur:STAUR_3365 UvrABC system protein C                  K03703     646      222     0.298      188     
spy:SPy_1068 excinuclease ABC (subunit C)               K03703     598      222     0.282      181     
mge:MG_206 excinuclease ABC, C subunit                  K03703     597      222     0.295      193     
phe:Phep_2656 DNA polymerase III, epsilon subunit       K02342     456      221     0.303      201     
tex:Teth514_1057 excinuclease ABC, C subunit            K03703     615      221     0.271      181     
oih:OB2116 excinuclease ABC subunit C (deoxyribodipyrim K03703     596      220     0.286      192     
spr:spr0543 Exonuclease ABC - subunit C                 K03703     614      220     0.293      181     
atu:Atu1129 excinuclease ABC chain C                    K03703     642      219     0.261      211     
gsu:GSU3279 excinuclease ABC, C subunit                 K03703     613      218     0.301      186     
ctt:CtCNB1_1674 excinuclease ABC, C subunit             K03703     650      217     0.263      205     
mmp:MMP0728 excinuclease ABC subunit C                  K03703     527      217     0.257      191     
brh:RBRH_02436 Excinuclease ABC subunit C               K03703     781      216     0.270      200     
bxe:Bxe_A0914 DNA polymerase III, epsilon subunit       K02342     395      216     0.396      91      
pst:PSPTO_3023 excinuclease ABC, C subunit              K03703     607      216     0.254      232     
spn:SP_0618 excinuclease ABC, subunit C                 K03703     614      216     0.287      181     
rle:RL1587 putative uvrABC system protein C             K03703     680      215     0.264      208     
wol:WD_0154 excinuclease ABC, C subunit                 K03703     605      215     0.269      208     
rpa:TX73_006010 excinuclease ABC subunit UvrC           K03703     704      215     0.270      211     
cpn:CPn_0940 Excinuclease ABC, Subunit C                K03703     603      215     0.264      197     
ase:ACPL_1659 DNA polymerase III subunit epsilon        K02342     603      214     0.275      222     
hth:HTH_1205 excinuclease ABC subunit C                 K03703     561      214     0.284      190     
afn:Acfer_0517 excinuclease ABC, C subunit              K03703     618      214     0.283      180     
ret:RHE_CH01479 excinuclease ABC subunit C protein      K03703     679      214     0.261      207     
ngo:NGO_0578 excinuclease ABC subunit C                 K03703     628      214     0.255      192     
bhe:BH05550 Excinuclease ABC subunit c                  K03703     661      213     0.250      260     
fnu:FN1090 Excinuclease ABC subunit C                   K03703     589      212     0.261      199     
pfl:PFL_3562 excinuclease ABC, C subunit                K03703     607      211     0.292      212     
lpn:lpg2645 excinuclease ABC subunit                    K03703     618      210     0.272      202     
tpa:TP_0472 excinuclease ABC, subunit C (uvrC)          K03703     691      209     0.270      185     
hpy:HP_0821 excinuclease ABC subunit C (uvrC)           K03703     594      209     0.294      194     
cdf:CD630_34100 Excinuclease ABC subunit C              K03703     605      208     0.278      194     
rru:Rru_A2220 Excinuclease ABC subunit C                K03703     639      207     0.255      251     
scl:sce7397 excinuclease ABC, subunit C                 K03703     742      206     0.265      185     
lcb:LCABL_15670 UvrABC system protein C (Protein uvrC)  K03703     602      205     0.265      181     
cpy:Cphy_0327 excinuclease ABC, C subunit               K03703     628      205     0.264      182     
bja:blr7470 excinuclease ABC chain C                    K03703     686      205     0.287      178     
rco:RC0864 excinuclease ABC subunit C                   K03703     639      205     0.272      180     
aae:aq_2126 repair excision nuclease subunit C          K03703     566      205     0.256      199     
nca:Noca_3128 DNA polymerase III, epsilon subunit       K02342     601      204     0.264      216     
bma:BMA0552 excinuclease ABC, C subunit                 K03703     749      203     0.284      176     
sjp:SJA_C1-22600 excinuclease ABC subunit C             K03703     637      201     0.275      222     
cbo:CBO3204 putative nuclease                           K03703     365      201     0.278      180     
psb:Psyr_2896 Excinuclease ABC subunit C                K03703     607      201     0.254      232     
lba:Lebu_0604 excinuclease ABC, C subunit               K03703     594      200     0.235      200     
ser:SERP0729 excinuclease ABC, C subunit                K03703     594      200     0.264      182     
det:DET1216 excinuclease ABC, C subunit                 K03703     607      200     0.249      225     
hel:HELO_2811 UvrABC system protein UvrC                K03703     604      199     0.250      204     
sat:SYN_01348 nuclease subunit of the excinuclease comp K03703     618      199     0.266      203     
sao:SAOUHSC_01102 excinuclease ABC subunit C            K03703     593      198     0.264      182     
sau:SA0993 excinuclease ABC subunit C                   K03703     593      198     0.264      182     
pae:PA2585 excinuclease ABC subunit C                   K03703     608      198     0.246      211     
rcp:RCAP_rcc00393 UvrABC system protein C               K03703     631      197     0.278      194     
btk:BT9727_4255 excinuclease ABC, subunit C             K03703     594      197     0.254      185     
ban:BA_4757 excinuclease ABC, C subunit                 K03703     594      196     0.254      185     
bha:BH3097 excinuclease ABC (subunit C)                 K03703     591      196     0.232      198     
mca:MCA1681 excinuclease ABC, C subunit                 K03703     626      195     0.243      210     
lil:LA_2166 excinuclease ABC subunit C                  K03703     609      194     0.295      190     
cje:Cj1246c excinuclease ABC subunit C                  K03703     600      194     0.278      187     
bpe:BP2081 putative excinuclease ABC subunit C          K03703     609      193     0.257      179     
hal:VNG_2381G excision nuclease chain C                 K03703     590      193     0.277      191     
sil:SPO3637 UvrABC system protein C                     K03703     623      192     0.258      194     
cdn:BN940_07311 Excinuclease ABC subunit C              K03703     607      191     0.251      207     
dde:Dde_1014 excinuclease ABC, C subunit                K03703     700      191     0.283      198     
wsu:WS1607 EXCINUCLEASE ABC SUBUNIT C                   K03703     602      190     0.264      212     
pde:Pden_2312 Excinuclease ABC subunit C                K03703     623      189     0.249      213     
tfu:Tfu_1027 DNA polymerase III, epsilon subunit        K02342     590      189     0.243      210     
neu:NE0933 uvrC Nuclease subunit of the excinuclease co K03703     604      189     0.262      191     
bpf:BpOF4_03140 excinuclease ABC subunit C              K03703     596      188     0.232      198     
ppu:PP_4098 UvrABC system protein C                     K03703     607      188     0.258      213     
bsu:BSU28490 UvrABC system protein C                    K03703     590      188     0.256      199     
abo:ABO_1305 excinuclease ABC, C subunit                K03703     607      187     0.266      214     
ftu:FTT_0777 DNA excision repair enzyme, subunit C (Uvr K03703     612      187     0.244      283     
hpj:jhp_0760 EXCINUCLEASE ABC SUBUNIT C                 K03703     594      187     0.273      194     
afr:AFE_0853 excinuclease ABC, C subunit                K03703     608      184     0.257      175     
tth:TT_C1182 excinuclease ABC subunit C                 K03703     630      184     0.275      138     
ypk:y2442 excinuclease ABC, subunit C                   K03703     617      184     0.280      189     
ddd:Dda3937_03959 Excinuclease ABC subunit C            K03703     610      183     0.266      173     
xom:XOO2170 excinuclease ABC subunit C                  K03703     618      183     0.268      194     
yps:YPTB1736 excinuclease ABC subunit C                 K03703     610      183     0.285      186     
ype:YPO1866 excinuclease ABC subunit C                  K03703     610      183     0.285      186     
cja:CJA_1786 excinuclease ABC, C subunit                K03703     612      182     0.237      198     
sml:Smlt1645 putative excinuclease ABC subunit C        K03703     614      182     0.259      193     
apl:APL_0277 UvrABC system protein C                    K03703     610      182     0.263      205     
rpr:RP572 EXCINUCLEASE ABC SUBUNIT C (uvrC)             K03703     626      182     0.275      171     
swi:Swit_4491 Excinuclease ABC subunit C                K03703     642      180     0.267      180     
nar:Saro_1060 Excinuclease ABC subunit C                K03703     658      180     0.261      199     
pmu:PM0857 UvrC                                         K03703     611      180     0.257      183     
pjd:Pjdr2_4818 excinuclease ABC, C subunit              K03703     626      179     0.243      177     
zmo:ZMO0672 excinuclease ABC, C subunit                 K03703     664      179     0.231      221     
ctr:CT_791 excinuclease ABC subunit C                   K03703     598      179     0.244      205     
cpe:CPE0352 excinuclease ABC subunit C                  K03703     620      179     0.265      181     
rsp:RSP_1074 Excinuclease ABC subunit C                 K03703     623      178     0.273      187     
sco:SCO1953 ABC excision nuclease subunit C             K03703     728      178     0.253      194     
hin:HI_0057 excinuclease ABC, subunit C (uvrC)          K03703     609      178     0.262      183     
gpo:GPOL_c28090 DNA polymerase III epsilon subunit      K02342     622      177     0.249      249     
gox:GOX2273 UvrC, excinuclease ABC subunit C            K03703     645      177     0.238      227     
eca:ECA2881 excinuclease ABC subunit C                  K03703     610      177     0.274      175     
xfa:XF_2311 excinuclease ABC subunit C                  K03703     627      177     0.256      195     
kfl:Kfla_2797 DNA polymerase III, epsilon subunit       K02342     602      176     0.236      199     
sgr:SGR_5569 putative excinuclease ABC subunit C        K03703     717      176     0.229      214     
hdu:HD_1812 excinuclease ABC, subunit C                 K03703     612      176     0.266      192     
cst:CLOST_0547 UvrABC system protein C (Protein uvrC) ( K03703     587      175     0.268      164     
cau:Caur_2033 excinuclease ABC, C subunit               K03703     651      175     0.264      178     
vvu:VV1_3053 excinuclease ABC, C subunit                K03703     610      175     0.249      189     
gtn:GTNG_2604 Excinuclease ABC, subunit C               K03703     592      174     0.237      198     
llm:llmg_1718 excinuclease ABC, C subunit               K03703     669      174     0.233      189     
csa:Csal_2133 Excinuclease ABC subunit C                K03703     604      173     0.254      205     
lla:L0258 excinuclease ABC subunit C                    K03703     668      171     0.233      189     
ssy:SLG_22870 UvrABC system protein C                   K03703     640      170     0.245      220     
amd:AMED_2206 DNA polymerase III subunit epsilon        K02342     567      170     0.250      180     
bce:BC4520 Excinuclease ABC subunit C                   K03703     590      170     0.235      183     
vpa:VP1944 excinuclease ABC, subunit C                  K03703     610      170     0.243      189     
cgl:Cgl1592 Nuclease subunit of the excinuclease comple K03703     696      169     0.245      192     
son:SO_1861 excinuclease ABC C subunit UvrC             K03703     609      169     0.263      179     
efa:EF1406 excinuclease ABC, subunit C                  K03703     598      168     0.253      174     
ccyc:SCMU_19760 UvrABC system protein C                 K03703     651      167     0.215      195     
sgu:SGLAU_08765 UvrABC system protein C                 K03703     692      167     0.247      194     
sct:SCAT_1109 UvrABC system protein C                   K03703     697      167     0.241      195     
rso:RSc1071 probable excinuclease abc subunit c (sos re K03703     654      167     0.257      171     
yen:YE1830 excinuclease ABC subunit C                   K03703     610      166     0.267      176     
vch:VC_1214 excinuclease ABC, subunit C                 K03703     610      165     0.250      176     
pmr:PMI1521 UvrABC system protein C (excinuclease ABC s K03703     610      164     0.245      188     
pfr:PFREUD_15200 UvrABC system protein C (Protein uvrC) K03703     664      163     0.228      197     
sen:SACE_2138 nuclease subunit of the excinuclease ABC  K03703     717      162     0.233      193     
plu:plu2027 excinuclease ABC subunit C                  K03703     610      162     0.261      188     
ksk:KSE_55360 putative UvrABC system protein C          K03703     675      161     0.242      194     
mmi:MMAR_2227 excinuclease ABC (subunit c-nuclease) Uvr K03703     647      161     0.245      196     
ctb:CTL0159 excinuclease ABC subunit C                  K03703     579      161     0.243      189     
cdi:DIP1314 Putative excinuclease ABC subunit C         K03703     687      160     0.231      195     
mva:Mvan_2697 Excinuclease ABC subunit C                K03703     678      157     0.237      194     
msm:MSMEG_3078 excinuclease ABC, C subunit              K03703     706      157     0.232      194     
cps:CPS_3270 excinuclease ABC, C subunit                K03703     639      157     0.249      189     
sma:SAVERM_6291 putative excinuclease ABC subunit C     K03703     681      157     0.246      195     
rer:RER_30250 UvrABC system protein C                   K03703     730      156     0.233      193     
mle:ML0562 putative excinuclease ABC subunit C          K03703     647      156     0.238      193     
rha:RHA1_ro01126 DNA-directed DNA polymerase            K02342     588      152     0.248      206     
mab:MAB_2784c UvrABC system protein C UvrC              K03703     671      150     0.233      193     
blo:BL0703 excinuclease ABC subunit C                   K03703     788      150     0.224      192     
nfa:NFA_35940 putative excision nuclease ABC subunit C  K03703     673      150     0.237      194     
mtu:Rv1420 excinuclease ABC subunit UvrC                K03703     646      147     0.237      194     
mtc:MT1463 excinuclease ABC, subunit C                  K03703     646      147     0.237      194     
vfi:VF_1626 excinuclease UvrABC, endonuclease subunit   K03703     608      146     0.249      177     
vg:65131009 uncultured phage cr4_1; homing endonuclease            326      142     0.263      137     
mul:MUL_1814 excinuclease ABC (subunit c-nuclease) UvrC K03703     628      140     0.233      176     
tcr:511075.30 TFIIH basal transcription factor complex  K10844     804      131     0.267      131     
nta:107824103 rhazimal reductase 1                      K22374     226      122     0.234      197     
mdm:103450127 pentatricopeptide repeat-containing prote            595      119     0.261      138     
tps:THAPSDRAFT_33153 hypothetical protein               K12736     633      118     0.226      133     
rcu:8259469 pentatricopeptide repeat-containing protein            611      115     0.250      144     
pti:PHATRDRAFT_34538 hypothetical protein               K03237     320      115     0.252      242     
fgr:FGSG_07667 hypothetical protein                                440      113     0.240      154     
dre:100536189 ankyrin repeat and BTB/POZ domain-contain K10520     476      113     0.220      241     
ola:101171150 leucine-rich repeat-containing protein 42            448      112     0.243      230     
fca:101100815 DBH-like monooxygenase protein 1                     619      108     0.236      216     
cfa:483986 DBH-like monooxygenase protein 1                        615      108     0.236      216     
bta:507076 DBH-like monooxygenase protein 1 isoform X1             614      108     0.236      216     
sce:YGR283C putative methyltransferase                  K09142     341      105     0.281      146     
dme:Dmel_CG11841 uncharacterized protein                           319      103     0.300      100     
xtr:733522 uncharacterized protein C3orf38 homolog                 305      100     0.277      112     
ecu:ECU06_1050 uncharacterized protein                             115       99     0.271      118     
zma:103629498 acyl transferase 7                                   160       98     0.326      86      
ath:AT5G05770 WUSCHEL related homeobox 7                           122       91     0.268      97      

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