SSDB Motif Search Result


Organism : Nitrobacter hamburgensis
Gene : Nham_0448
Definition : K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | (GenBank) ATP-dependent DNA ligase LigD polymerase module / ATP-dependent DNA ligase LigD phosphoesterase module
Motif idFromToDefinitionE valueScore
pf:LigD_N2104DNA polymerase Ligase (LigD) 4.4e-42-
pf:DNA_ligase_A_M240409ATP dependent DNA ligase domain 3e-25-
pf:DNA_ligase_A_C425519ATP dependent DNA ligase C terminal region 2.5e-23-
pf:LigD_Prim-Pol594844 2.3e-86-
pf:DNA_primase_S695820DNA primase small subunit 8e-05-

nha:Nham_0448 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

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