GFIT result for
bfs
|
GFIT result for
bfs
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| bfs:BF9343_1881 (183 a.a.) |
-- |
putative RNA polymerase ECF-type sigma factor | |||||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > bfr:BF1902(183) | 183 | 100.0 | 1170 | 25 | <> | K03088 | rpoE | RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > bfb:VU15_08125(183) | 183 | 99.5 | 1162 | 26 | <> | RNA polymerase sigma70 factor | |||
| > bfg:BF638R_1936(183) | 183 | 98.9 | 1159 | 27 | <> | putative RNA polymerase ECF-type sigma factor | |||
| > bfe:K6V30_11595(183) | 182 | 69.8 | 835 | 24 | <> | K03088 | rpoE | RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > bth:BT_4643(183) | 182 | 69.2 | 830 | 25 | <> | K03088 | rpoE | RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > btho:Btheta7330_03349(183) | 182 | 69.2 | 830 | 27 | <> | rpoE_6; ECF RNA polymerase sigma-E factor | |||
| > pgol:K6V26_07415(183) | 181 | 68.0 | 815 | 53 | <> | K03088 | rpoE | RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > pfai:NXY11_09855(183) | 181 | 68.0 | 813 | 67 | <> | K03088 | rpoE | RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > pjo:LK449_04830(183) | 181 | 67.4 | 805 | 27 | <> | K03088 | rpoE | RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > pmer:INE87_00203(183) | 181 | 67.4 | 804 | 27 | <> | K03088 | rpoE | Sigma-70, region 4; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > dyh:G7051_05565(?) | 182 | 62.6 | 776 | 0 | -- | - | |||
| > dys:G7050_05305(183) | 182 | 62.6 | 776 | 5 | <> | K03088 | rpoE | RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > bfc:BacF7301_13385(183) | 182 | 64.3 | 775 | 46 | <> | K03088 | rpoE | RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > bno:K8P02_03445(183) | 180 | 64.4 | 771 | 22 | <> | K03088 | rpoE | RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > bis:DXK01_012695(183) | 180 | 65.0 | 766 | 12 | <> | RNA polymerase sigma-70 factor | |||
| > bcel:BcellWH2_04667(183) | 180 | 64.4 | 763 | 16 | <> | rpoE_7; ECF RNA polymerase sigma-E factor | |||
| > bxy:BXY_37470(183) | 182 | 63.2 | 754 | 29 | <> | RNA polymerase sigma factor, sigma-70 family/RNA polymerase sigma-70 factor, Bacteroides expansion family 1 | |||
| > parc:CI960_10695(179) | 178 | 65.2 | 745 | 29 | <> | RNA polymerase sigma-70 factor | |||
| > pdi:BDI_1305(179) | 178 | 65.2 | 745 | 24 | <> | K03088 | rpoE | RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > bdh:GV66_10290(183) | 180 | 62.2 | 744 | 21 | <> | RNA polymerase sigma70 factor | |||
| > bdo:EL88_17270(183) | 180 | 62.2 | 744 | 23 | <> | RNA polymerase sigma70 factor | |||
| > boa:Bovatus_04847(183) | 182 | 61.5 | 738 | 39 | <> | sigL_6; ECF RNA polymerase sigma factor SigL | |||
| > bsal:K6V25_10875(183) | 180 | 61.7 | 726 | 18 | <> | K03088 | rpoE | RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > bhum:JXR92_015785(183) | 181 | 61.3 | 725 | 9 | <> | K03088 | rpoE | RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > bun:Bun01g_33310(183) | 181 | 60.8 | 722 | 12 | <> | DNA-directed RNA polymerase sigma-70 factor | |||
| > bhl:Bache_1764(183) | 181 | 60.2 | 720 | 14 | <> | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > bhf:C3V43_03175(183) | 179 | 59.8 | 702 | 12 | <> | RNA polymerase sigma-70 factor | |||
| > bacc:BRDCF_p1715(182) | 182 | 52.7 | 644 | 5 | <> | RNA Polymerase ECF-Type Sigma Factor | |||
| > mbas:ALGA_3729(184) | 176 | 42.0 | 431 | 14 | <> | RNA polymerase sigma-70 factor | |||
| > ttz:FHG85_01735(175) | 165 | 40.6 | 426 | 4 | <> | K03088 | rpoE | RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mcos:GM418_11445(225) | 173 | 41.0 | 424 | 82 | -- | RNA polymerase sigma-70 factor | |||
| > iro:RT717_12330(?) | 173 | 43.4 | 418 | 0 | -- | - | |||
| > blq:L21SP5_02991(179) | 177 | 39.0 | 412 | 5 | <> | cnrH; RNA polymerase sigma factor CnrH | |||
| > ppsv:PEPS_31620(?) | 170 | 38.8 | 411 | 0 | -- | - | |||
| > fua:LVD17_02690(?) | 180 | 40.6 | 409 | 0 | -- | - | |||
| > anf:AQPE_2363(?) | 179 | 36.9 | 408 | 0 | -- | - | |||
| > srd:SD10_10105(213) | 178 | 39.3 | 405 | 21 | <- | RNA polymerase subunit sigma-24 | |||
| > sli:Slin_2375(213) | 180 | 38.9 | 404 | 20 | -- | K03088 | rpoE | ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > agi:FSB73_00460(194) | 174 | 36.8 | 403 | 30 | <- | RNA polymerase sigma-70 factor | |||
| > dori:FH5T_07750(193) | 177 | 40.7 | 397 | 19 | -- | RNA polymerase subunit sigma-24 | |||
| > oli:FKG96_14795(193) | 182 | 36.8 | 394 | 48 | -- | RNA polymerase sigma-70 factor | |||
| > shg:Sph21_3403(193) | 182 | 36.8 | 394 | 41 | -- | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > muc:MuYL_4367(193) | 180 | 38.3 | 390 | 13 | -- | RNA polymerase sigma-70 factor | |||
| > rmr:Rmar_1075(187) | 176 | 37.5 | 390 | 14 | <- | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > atee:K9M52_15220(195) | 174 | 36.2 | 387 | 25 | <- | K03088 | rpoE | RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > drc:G0Q07_01830(193) | 173 | 39.9 | 387 | 18 | -- | RNA polymerase sigma-70 factor | |||
| > fln:FLA_5859(195) | 167 | 37.1 | 387 | 66 | -- | K03088 | rpoE | RNA polymerase sigma-24 factor, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > rmg:Rhom172_1020(187) | 174 | 36.8 | 387 | 13 | <- | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > spik:EXU85_14520(248) | 176 | 38.6 | 385 | 37 | -- | RNA polymerase sigma-70 factor | |||
| > fll:EI427_03140(206) | 177 | 37.9 | 384 | 7 | <- | RNA polymerase sigma-70 factor | |||
| > prk:H9N25_00155(194) | 163 | 41.1 | 384 | 28 | -- | RNA polymerase sigma-70 factor | |||
| > run:DR864_19240(192) | 182 | 39.6 | 384 | 20 | -- | RNA polymerase sigma-70 factor | |||
| > chk:D4L85_06840(192) | 177 | 38.4 | 382 | 39 | -- | RNA polymerase sigma-70 factor | |||
| > dsn:HWI92_23490(208) | 179 | 38.5 | 382 | 26 | <- | RNA polymerase sigma-70 factor | |||
| > rup:DTQ70_25590(193) | 181 | 37.6 | 382 | 30 | -- | RNA polymerase sigma-70 factor | |||
| > sfol:H3H32_13430(?) | 177 | 37.9 | 382 | 0 | -- | - | |||
| > salt:AO058_17200(180) | 177 | 35.6 | 381 | 7 | <- | hypothetical protein | |||
| > dfe:Dfer_4122(203) | 172 | 35.5 | 380 | 47 | -- | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > emz:MB380_11640(?) | 181 | 39.2 | 380 | 0 | -- | - | |||
| > msab:SNE25_02530(?) | 184 | 37.5 | 380 | 0 | -- | - | |||
| > phe:Phep_1932(195) | 166 | 38.6 | 380 | 47 | -- | RNA polymerase sigma-70 factor | |||
| > sbx:CA265_00265(221) | 163 | 41.1 | 380 | 35 | -- | RNA polymerase sigma-70 factor | |||
| > senf:GJR95_32395(?) | 170 | 40.0 | 380 | 0 | -- | - | |||
| > aswu:HUW51_19445(203) | 170 | 38.8 | 379 | 20 | <- | K03088 | rpoE | RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > dpf:ON006_16380(?) | 180 | 35.0 | 379 | 0 | -- | - | |||
| > hhy:Halhy_4846(181) | 176 | 37.5 | 378 | 24 | -- | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > rsi:Runsl_2080(192) | 182 | 39.0 | 378 | 18 | <- | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > fka:KM029_07530(182) | 164 | 37.8 | 377 | 6 | <- | RNA polymerase sigma-70 factor | |||
| > fmm:LVD15_08120(?) | 177 | 33.9 | 376 | 0 | -- | - | |||
| > gph:GEMMAAP_14410(183) | 182 | 35.7 | 376 | 13 | -- | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > fax:FUAX_18790(?) | 182 | 33.0 | 375 | 0 | -- | - | |||
| > eol:Emtol_3363(188) | 182 | 40.7 | 374 | 7 | -- | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > flu:CHH17_03970(199) | 177 | 35.6 | 374 | 5 | <- | hypothetical protein | |||
| > rhoz:GXP67_34400(192) | 178 | 37.6 | 374 | 21 | -- | RNA polymerase sigma-70 factor | |||
| > mgos:DIU38_026120(212) | 181 | 34.8 | 373 | 38 | <- | RNA polymerase sigma-70 factor | |||
| > muh:HYN43_023360(213) | 185 | 35.1 | 373 | 35 | -- | RNA polymerase sigma-70 factor | |||
| > soq:LQ777_11800(192) | 177 | 36.7 | 373 | 18 | <- | RNA polymerase sigma-70 factor | |||
| > agd:FRZ59_02165(180) | 172 | 36.6 | 372 | 21 | -- | RNA polymerase sigma-70 factor | |||
| > lby:Lbys_2258(172) | 167 | 40.7 | 372 | 8 | <- | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > mrub:DEO27_024820(212) | 182 | 35.2 | 372 | 45 | -- | RNA polymerase sigma-70 factor | |||
| > als:DJ013_21085(201) | 173 | 37.6 | 370 | 10 | -- | K03088 | rpoE | RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > bfh:F1611_00405(?) | 176 | 34.1 | 368 | 0 | -- | - | |||
| > fpb:NLJ00_21565(201) | 175 | 36.0 | 367 | 14 | <- | RNA polymerase sigma-70 factor | |||
| > haei:MUN82_18805(?) | 180 | 36.1 | 367 | 0 | -- | - | |||
| > pep:AQ505_10020(194) | 165 | 38.2 | 367 | 52 | -- | RNA polymerase subunit sigma-24 | |||
| > ggr:HKW67_22220(182) | 182 | 35.7 | 366 | 21 | -- | K03088 | rpoE | RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mjj:PQO05_10510(193) | 172 | 37.8 | 366 | 18 | <- | RNA polymerase sigma-70 factor | |||
| > bvir:I6J59_04030(188) | 176 | 35.2 | 365 | 106 | -- | K03088 | rpoE | RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > dyc:NFI80_23300(197) | 174 | 36.8 | 365 | 27 | -- | RNA polymerase sigma-70 factor | |||
| > mup:A0256_08990(185) | 179 | 36.3 | 365 | 13 | -- | hypothetical protein | |||
| > pcm:AY601_2323(194) | 163 | 38.7 | 365 | 28 | -- | RNA polymerase ECF-type sigma factor | |||
| > rek:N6H18_13690(178) | 164 | 39.6 | 365 | 12 | <- | RNA polymerase sigma-70 factor | |||
| > pgs:CPT03_09240(174) | 161 | 38.5 | 364 | 37 | -- | RNA polymerase sigma-70 factor | |||
| > proe:H9L23_18740(188) | 178 | 34.8 | 363 | 23 | <- | K03088 | rpoE | RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > pgj:QG516_05535(200) | 164 | 37.8 | 362 | 52 | -- | K03088 | rpoE | RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > dfq:NFI81_24350(197) | 178 | 36.0 | 361 | 27 | -- | RNA polymerase sigma-70 factor | |||
| > mgk:FSB76_26150(206) | 180 | 32.8 | 361 | 38 | <- | RNA polymerase sigma-70 factor | |||
| > rsr:T7867_04285(?) | 186 | 37.1 | 361 | 0 | -- | - | |||
| > dcn:MUK70_21960(203) | 172 | 33.7 | 360 | 42 | -- | K03088 | rpoE | RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > smon:AWR27_02910(193) | 176 | 37.5 | 359 | 22 | <- | RNA polymerase subunit sigma-24 | |||