GFIT result for
rmg
|
GFIT result for
rmg
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| rmg:Rhom172_1020 (187 a.a.) |
-- |
RNA polymerase, sigma-24 subunit, ECF subfamily | |||||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > rmr:Rmar_1075(187) | 187 | 98.4 | 1210 | 14 | <> | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > smon:AWR27_02910(193) | 186 | 43.5 | 430 | 22 | -- | RNA polymerase subunit sigma-24 | |||
| > srd:SD10_10105(213) | 178 | 44.4 | 430 | 21 | -> | RNA polymerase subunit sigma-24 | |||
| > rcg:N7E81_18250(?) | 181 | 42.0 | 425 | 0 | -- | - | |||
| > sli:Slin_2375(213) | 186 | 40.3 | 421 | 20 | -> | K03088 | rpoE | ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > gba:J421_1801(199) | 189 | 43.4 | 419 | 34 | -- | RNA polymerase sigma-70 factor | |||
| > sfol:H3H32_13430(?) | 187 | 41.7 | 418 | 0 | -- | - | |||
| > dsn:HWI92_17340(203) | 169 | 45.6 | 414 | 28 | -- | RNA polymerase sigma-70 factor | |||
| > bhl:Bache_1764(183) | 175 | 40.6 | 412 | 14 | -- | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > anf:AQPE_2363(?) | 182 | 40.7 | 409 | 0 | -- | - | |||
| > dpf:ON006_26855(?) | 169 | 44.4 | 406 | 0 | -- | - | |||
| > gau:GAU_2948(197) | 179 | 43.6 | 405 | 12 | -- | RNA polymerase ECF-type sigma factor | |||
| > pjo:LK449_04830(183) | 172 | 39.0 | 405 | 27 | -- | K03088 | rpoE | RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > chk:D4L85_06840(192) | 176 | 40.9 | 403 | 39 | -- | RNA polymerase sigma-70 factor | |||
| > ggr:HKW67_22220(182) | 179 | 39.7 | 403 | 21 | -> | K03088 | rpoE | RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > pmer:INE87_00203(183) | 172 | 39.0 | 402 | 27 | -- | K03088 | rpoE | Sigma-70, region 4; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > spik:EXU85_14520(248) | 180 | 41.7 | 402 | 37 | -> | RNA polymerase sigma-70 factor | |||
| > bfe:K6V30_11595(183) | 176 | 37.5 | 400 | 24 | -- | K03088 | rpoE | RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > bth:BT_4643(183) | 176 | 38.1 | 400 | 25 | -- | K03088 | rpoE | RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > btho:Btheta7330_03349(183) | 176 | 38.1 | 400 | 27 | -- | rpoE_6; ECF RNA polymerase sigma-E factor | |||
| > tpel:P0M28_11690(?) | 162 | 41.4 | 399 | 0 | -- | - | |||
| > dcn:MUK70_21960(203) | 169 | 43.8 | 398 | 42 | -- | K03088 | rpoE | RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > hhy:Halhy_4846(181) | 164 | 43.3 | 398 | 24 | -- | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > dfe:Dfer_4122(203) | 169 | 44.4 | 397 | 47 | -- | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > dfq:NFI81_17845(203) | 169 | 43.8 | 396 | 23 | -- | K03088 | rpoE | RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > dyc:NFI80_16850(203) | 169 | 43.8 | 396 | 28 | -- | RNA polymerase sigma-70 factor | |||
| > dyh:G7051_05565(?) | 175 | 38.3 | 396 | 0 | -- | - | |||
| > dys:G7050_05305(183) | 175 | 38.3 | 396 | 5 | -- | K03088 | rpoE | RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > dori:FH5T_07750(193) | 176 | 38.6 | 392 | 19 | -- | RNA polymerase subunit sigma-24 | |||
| > bno:K8P02_03445(183) | 175 | 38.9 | 391 | 22 | -- | K03088 | rpoE | RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > csac:SIO70_29280(?) | 185 | 37.3 | 389 | 0 | -- | - | |||
| > iro:RT717_06545(?) | 182 | 39.6 | 389 | 0 | -- | - | |||
| > parc:CI960_10695(179) | 172 | 38.4 | 389 | 29 | -- | RNA polymerase sigma-70 factor | |||
| > pdi:BDI_1305(179) | 172 | 38.4 | 389 | 24 | -- | K03088 | rpoE | RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > bfc:BacF7301_13385(183) | 173 | 36.4 | 388 | 46 | -- | K03088 | rpoE | RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > bis:DXK01_012695(183) | 171 | 39.2 | 388 | 12 | -- | RNA polymerase sigma-70 factor | |||
| > spib:G8759_21925(235) | 187 | 40.6 | 388 | 49 | -> | RNA polymerase sigma-70 factor | |||
| > bfr:BF1902(183) | 174 | 36.8 | 387 | 25 | -- | K03088 | rpoE | RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > bfs:BF9343_1881(183) | 174 | 36.8 | 387 | 25 | -- | putative RNA polymerase ECF-type sigma factor | |||
| > gph:GEMMAAP_14410(183) | 175 | 40.6 | 387 | 13 | -- | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > senf:GJR95_36565(?) | 187 | 40.1 | 387 | 0 | -- | - | |||
| > bfb:VU15_08125(183) | 174 | 36.8 | 386 | 26 | -- | RNA polymerase sigma70 factor | |||
| > bxy:BXY_37470(183) | 174 | 36.8 | 386 | 29 | -- | RNA polymerase sigma factor, sigma-70 family/RNA polymerase sigma-70 factor, Bacteroides expansion family 1 | |||
| > pgol:K6V26_07415(183) | 170 | 37.1 | 386 | 53 | -- | K03088 | rpoE | RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > bfg:BF638R_1936(183) | 174 | 36.8 | 385 | 27 | -- | putative RNA polymerase ECF-type sigma factor | |||
| > pfai:NXY11_09855(183) | 170 | 36.5 | 384 | 67 | -- | K03088 | rpoE | RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > soq:LQ777_11800(192) | 187 | 40.1 | 384 | 18 | -- | RNA polymerase sigma-70 factor | |||
| > chrw:KA713_16095(191) | 179 | 38.0 | 383 | 9 | -> | RNA polymerase sigma-70 factor | |||
| > flw:LVD16_13670(?) | 173 | 41.6 | 382 | 0 | -- | - | |||
| > muh:HYN43_023360(213) | 175 | 40.0 | 381 | 35 | -- | RNA polymerase sigma-70 factor | |||
| > bcel:BcellWH2_04667(183) | 174 | 36.8 | 380 | 16 | -- | rpoE_7; ECF RNA polymerase sigma-E factor | |||
| > drc:G0Q07_01830(193) | 176 | 38.1 | 380 | 18 | -- | RNA polymerase sigma-70 factor | |||
| > bun:Bun01g_33310(183) | 175 | 38.9 | 379 | 12 | -- | DNA-directed RNA polymerase sigma-70 factor | |||
| > fln:FLA_5859(195) | 188 | 37.2 | 379 | 66 | -- | K03088 | rpoE | RNA polymerase sigma-24 factor, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > agd:FRZ59_02165(180) | 169 | 40.2 | 378 | 21 | -- | RNA polymerase sigma-70 factor | |||
| > stae:HNV11_03645(205) | 194 | 38.7 | 378 | 16 | -> | RNA polymerase sigma-70 factor | |||
| > bhum:JXR92_015785(183) | 175 | 38.9 | 377 | 9 | -- | K03088 | rpoE | RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > fua:LVD17_02690(?) | 179 | 38.0 | 376 | 0 | -- | - | |||
| > mrub:DEO27_024820(212) | 173 | 38.7 | 374 | 45 | -- | RNA polymerase sigma-70 factor | |||
| > emz:MB380_11640(?) | 176 | 38.1 | 373 | 0 | -- | - | |||
| > htb:MTX78_02610(196) | 171 | 38.6 | 373 | 11 | -- | RNA polymerase sigma-70 factor | |||
| > mgos:DIU38_026120(212) | 173 | 39.9 | 373 | 38 | -- | RNA polymerase sigma-70 factor | |||
| > chih:GWR21_12290(205) | 175 | 36.6 | 372 | 38 | -- | RNA polymerase sigma-70 factor | |||
| > fmm:LVD15_08120(?) | 170 | 35.9 | 372 | 0 | -- | - | |||
| > hsb:MWH26_18365(?) | 182 | 36.3 | 372 | 0 | -- | - | |||
| > boa:Bovatus_04847(183) | 174 | 35.6 | 370 | 39 | -- | sigL_6; ECF RNA polymerase sigma factor SigL | |||
| > chf:KTO58_16520(173) | 164 | 39.6 | 369 | 60 | -- | RNA polymerase sigma-70 factor | |||
| > bdh:GV66_10290(183) | 171 | 35.1 | 368 | 21 | -- | RNA polymerase sigma70 factor | |||
| > bdo:EL88_17270(183) | 171 | 35.1 | 368 | 23 | -- | RNA polymerase sigma70 factor | |||
| > clit:OQ292_25815(193) | 179 | 38.5 | 368 | 0 | -- | RNA polymerase sigma-70 factor | |||
| > pgo:FSB84_18140(191) | 162 | 39.5 | 368 | 155 | -- | RNA polymerase sigma-70 factor | |||
| > mcos:GM418_11445(225) | 176 | 37.5 | 367 | 82 | -- | RNA polymerase sigma-70 factor | |||
| > muc:MuYL_4367(193) | 171 | 38.6 | 367 | 13 | -- | RNA polymerase sigma-70 factor | |||
| > mgk:FSB76_24290(179) | 175 | 37.1 | 366 | 34 | -> | RNA polymerase sigma-70 factor | |||
| > rsr:T7867_04285(?) | 184 | 38.6 | 366 | 0 | -- | - | |||
| > bhf:C3V43_03175(183) | 175 | 35.4 | 365 | 12 | -- | RNA polymerase sigma-70 factor | |||
| > asx:CDL62_12380(184) | 170 | 39.4 | 363 | 4 | -> | RNA polymerase sigma-70 factor | |||
| > coy:HF329_07910(199) | 181 | 36.5 | 363 | 86 | -- | RNA polymerase sigma-70 factor | |||
| > hqi:H9L05_04745(191) | 171 | 38.0 | 363 | 7 | -- | RNA polymerase sigma-70 factor | |||
| > prho:PZB74_16955(?) | 185 | 37.3 | 363 | 0 | -- | - | |||
| > hym:N008_02345(211) | 172 | 38.4 | 362 | 3 | -> | hypothetical protein | |||
| > blq:L21SP5_02991(179) | 170 | 36.5 | 361 | 5 | -> | cnrH; RNA polymerase sigma factor CnrH | |||
| > pcm:AY601_3746(210) | 170 | 35.3 | 361 | 27 | -- | RNA polymerase ECF-type sigma factor | |||
| > rup:DTQ70_25590(193) | 187 | 40.6 | 360 | 30 | -> | RNA polymerase sigma-70 factor | |||
| > flu:CHH17_03970(199) | 179 | 39.7 | 359 | 5 | -> | hypothetical protein | |||
| > flv:KJS94_03115(190) | 167 | 43.1 | 358 | 3 | -> | K03088 | rpoE | RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > eol:Emtol_3363(188) | 186 | 39.2 | 357 | 7 | -- | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > obt:OPIT5_06270(195) | 191 | 37.7 | 357 | 6 | -- | RNA polymerase subunit sigma-24 | |||
| > rek:N6H18_13525(195) | 185 | 36.8 | 357 | 10 | -- | RNA polymerase sigma-70 factor | |||
| > cpi:Cpin_6568(205) | 175 | 33.7 | 356 | 48 | -- | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > flm:MY04_2566(216) | 174 | 37.4 | 356 | 8 | -- | RNA polymerase sigma-70 factor | |||
| > fya:KMW28_03320(216) | 174 | 37.4 | 356 | 10 | -- | RNA polymerase sigma-70 factor | |||
| > rti:DC20_20250(203) | 175 | 38.9 | 356 | 8 | -> | hypothetical protein | |||
| > pgj:QG516_05535(200) | 173 | 40.5 | 355 | 52 | -- | K03088 | rpoE | RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sphn:BV902_15350(185) | 173 | 34.7 | 355 | 34 | -- | hypothetical protein | |||
| > haei:MUN82_18805(?) | 187 | 38.5 | 354 | 0 | -- | - | |||
| > nko:Niako_4016(197) | 169 | 36.7 | 354 | 76 | -- | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > bsal:K6V25_10875(183) | 172 | 36.0 | 353 | 18 | -- | K03088 | rpoE | RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > flg:LV716_07800(197) | 174 | 33.9 | 353 | 15 | -- | RNA polymerase sigma-70 factor | |||
| > hvl:MUN86_23645(?) | 182 | 34.6 | 352 | 0 | -- | - | |||