GFIT result for
gfe
|
GFIT result for
gfe
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| gfe:Gferi_14465 (178 a.a.) |
-- |
RNA polymerase subunit sigma-24 | |||||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > ckl:CKL_1611(175) | 176 | 63.1 | 732 | 3 | -- | K03088 | rpoE | Predicted sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ckr:CKR_1497(175) | 176 | 63.1 | 732 | 3 | -> | hypothetical protein | |||
| > cth:Cthe_1809(179) | 177 | 59.9 | 719 | 4 | -- | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ctx:Clo1313_2483(179) | 177 | 59.9 | 719 | 4 | -> | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > gte:GTCCBUS3UF5_16300(173) | 173 | 59.0 | 686 | 2 | -> | RNA polymerase sigma factor | |||
| > gtk:GT3570_06720(173) | 173 | 59.0 | 686 | 2 | -> | RNA polymerase subunit sigma-70 | |||
| > gse:GT50_01065(173) | 173 | 57.8 | 672 | 2 | -> | RNA polymerase sigma 70 | |||
| > gtn:GTNG_1263(173) | 168 | 57.7 | 662 | 2 | -> | Putative RNA polymerase sigma factor | |||
| > tis:P3962_00150(169) | 165 | 58.2 | 638 | 3 | -> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > stho:QNH10_03290(183) | 157 | 60.5 | 630 | 5 | -- | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > anr:Ana3638_11575(186) | 159 | 51.6 | 525 | 1 | -- | sigma-70 family RNA polymerase sigma factor | |||
| > acht:bsdcttw_13770(182) | 178 | 45.5 | 504 | 4 | -> | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > puf:UFO1_3248(185) | 177 | 39.0 | 391 | 5 | -- | RNA polymerase, sigma-24 subunit, RpoE, ECF subfamily | |||
| > coh:EAV92_18100(187) | 149 | 40.9 | 363 | 7 | -- | sigma-70 family RNA polymerase sigma factor | |||
| > pft:JBW_03215(185) | 176 | 37.5 | 361 | 2 | -- | RNA polymerase, sigma-24 subunit, RpoE, ECF subfamily | |||
| > sti:Sthe_2346(181) | 172 | 35.5 | 352 | 12 | -- | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > calk:HUE98_16005(173) | 159 | 36.5 | 343 | 4 | -> | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mana:MAMMFC1_02173(188) | 180 | 33.3 | 341 | 3 | -- | rpoE_2; ECF RNA polymerase sigma-E factor | |||
| > cai:Caci_8330(282) | 172 | 32.6 | 324 | 41 | -- | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ttm:Tthe_1485(170) | 168 | 32.1 | 321 | 3 | -- | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > tto:Thethe_01451(170) | 168 | 32.1 | 321 | 3 | -- | RNA polymerase sigma factor, sigma-70 family | |||
| > spra:CP972_20380(276) | 177 | 32.2 | 320 | 48 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ncd:ACONDI_03081(193) | 177 | 33.9 | 317 | 5 | -> | K03088 | rpoE | sigX_2; ECF RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sted:SPTER_35610(195) | 171 | 33.3 | 317 | 1 | -> | sigD_2; ECF RNA polymerase sigma factor SigD | |||
| > stri:C7M71_017505(259) | 177 | 32.2 | 316 | 14 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mmar:MODMU_4999(210) | 172 | 33.7 | 315 | 24 | -- | K03088 | rpoE | sigX; RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ddl:Desdi_0881(158) | 150 | 37.3 | 314 | 2 | -> | RNA polymerase sigma factor, sigma-70 family | |||
| > aser:Asera_05600(281) | 174 | 33.3 | 313 | 28 | -- | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > nth:Nther_2062(176) | 160 | 36.9 | 313 | 4 | -- | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > thug:KNN16_02695(197) | 170 | 32.9 | 312 | 9 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > strh:GXP74_36695(244) | 173 | 31.8 | 311 | 20 | -- | sigma-70 family RNA polymerase sigma factor | |||
| > aeb:C6I20_00785(234) | 172 | 32.6 | 310 | 3 | -- | RNA polymerase subunit sigma-70 | |||
| > sct:SCAT_3420(248) | 177 | 31.6 | 310 | 27 | -- | RNA polymerase ECF-subfamily sigma factor | |||
| > scy:SCATT_34060(266) | 177 | 31.6 | 310 | 29 | -- | ECF subfamily RNA polymerase sigma factor | |||
| > strc:AA958_20175(268) | 174 | 32.8 | 310 | 29 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > abry:NYE86_32400(267) | 174 | 32.2 | 307 | 37 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > jtl:M6D93_02445(289) | 175 | 32.0 | 307 | 11 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ksk:KSE_33690(273) | 177 | 31.6 | 306 | 176 | -- | bldN; putative RNA polymerase ECF subfamily sigma factor | |||
| > kau:B6264_13620(273) | 177 | 31.6 | 305 | 16 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > kit:CFP65_3152(280) | 177 | 31.6 | 305 | 18 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > salb:XNR_3527(268) | 177 | 30.5 | 305 | 18 | -- | K03088 | rpoE | BldN RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sky:D0C37_19235(268) | 177 | 30.5 | 305 | 15 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > stir:DDW44_17150(278) | 177 | 31.1 | 305 | 26 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > svio:HWN34_17960(268) | 177 | 30.5 | 305 | 21 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > svr:CP971_18840(273) | 177 | 31.6 | 305 | 16 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > yia:LO772_19945(261) | 172 | 32.6 | 305 | 25 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > amq:AMETH_0444(215) | 177 | 32.8 | 304 | 27 | -- | K03088 | rpoE | rpoE; RNA polymerase sigma-70 factor, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > atl:Athai_01830(281) | 174 | 32.8 | 304 | 39 | -- | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sgob:test1122_15125(266) | 173 | 31.2 | 304 | 13 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sspo:DDQ41_18215(278) | 177 | 30.5 | 304 | 22 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > seng:OJ254_10515(?) | 173 | 31.8 | 303 | 0 | -- | - | |||
| > snig:HEK616_72540(261) | 173 | 31.8 | 303 | 20 | -- | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > snq:CP978_19245(258) | 177 | 31.1 | 303 | 19 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sroc:RGF97_18830(?) | 177 | 30.5 | 303 | 0 | -- | - | |||
| > srug:F0345_11675(268) | 177 | 30.5 | 303 | 19 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > bbrg:U6N30_25820(?) | 175 | 32.6 | 302 | 0 | -- | - | |||
| > gly:K3N28_10560(275) | 176 | 32.4 | 302 | 9 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sals:SLNWT_2815(267) | 177 | 30.5 | 302 | 25 | -- | K03088 | rpoE | ECF subfamily RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sarg:HKX69_15000(?) | 173 | 31.2 | 302 | 0 | -- | - | |||
| > sbro:GQF42_25090(259) | 173 | 31.2 | 302 | 32 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sdd:D9753_15265(259) | 173 | 30.6 | 302 | 25 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sgf:HEP81_03470(264) | 173 | 31.2 | 302 | 22 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sgu:SGLAU_19145(256) | 173 | 31.2 | 302 | 23 | -- | K03088 | rpoE | AdsA-like sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sho:SHJGH_5363(259) | 173 | 31.2 | 302 | 33 | -- | K03088 | rpoE | RNA polymerase ECF-subfamily sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > shy:SHJG_5601(259) | 173 | 31.2 | 302 | 34 | -- | K03088 | rpoE | RNA polymerase ECF-subfamily sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sinn:ABB07_16780(?) | 173 | 31.2 | 302 | 0 | -- | - | |||
| > smao:CAG99_11270(260) | 173 | 31.8 | 302 | 32 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > spad:DVK44_12985(265) | 177 | 30.5 | 302 | 23 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > splu:LK06_013405(259) | 173 | 31.2 | 302 | 25 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > spun:BFF78_18770(261) | 173 | 31.2 | 302 | 31 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > srj:SRO_3261(264) | 173 | 31.2 | 302 | 22 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > srw:TUE45_04981(262) | 173 | 31.2 | 302 | 36 | -- | K03088 | rpoE | sigX; RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > salj:SMD11_3706(268) | 173 | 31.2 | 301 | 25 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sauo:BV401_25345(268) | 173 | 31.2 | 301 | 20 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sco:SCO3323(177) | 177 | 30.5 | 301 | 22 | -- | K03088 | rpoE | SCE68.21; RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sdrz:NEH16_17870(259) | 177 | 30.5 | 301 | 19 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > shau:K9S39_24435(?) | 173 | 31.2 | 301 | 0 | -- | - | |||
| > slon:LGI35_25495(263) | 173 | 31.2 | 301 | 29 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > slv:SLIV_21180(264) | 177 | 30.5 | 301 | 23 | -- | K03088 | rpoE | ECF sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > smal:SMALA_4300(178) | 173 | 31.2 | 301 | 18 | -- | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > smob:J7W19_14715(270) | 173 | 31.2 | 301 | 29 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sov:QZH56_19460(?) | 173 | 31.2 | 301 | 0 | -- | - | |||
| > srim:CP984_21350(260) | 173 | 31.2 | 301 | 23 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > srk:FGW37_14890(277) | 173 | 31.2 | 301 | 25 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > strz:OYE22_13970(?) | 177 | 31.1 | 301 | 0 | -- | - | |||
| > stub:MMF93_18845(279) | 172 | 32.0 | 301 | 23 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > bsd:BLASA_4480(259) | 172 | 31.4 | 300 | 44 | -- | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > jcy:M6B22_13550(?) | 170 | 31.8 | 300 | 0 | -- | - | |||
| > kqi:F1D05_16620(180) | 179 | 32.4 | 300 | 25 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ksl:OG809_07655(?) | 179 | 32.4 | 300 | 0 | -- | - | |||
| > sact:DMT42_22150(261) | 173 | 31.2 | 300 | 23 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > scad:DN051_17815(256) | 173 | 31.2 | 300 | 31 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > scin:CP977_15330(261) | 173 | 30.6 | 300 | 17 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > scyg:S1361_22385(259) | 173 | 31.2 | 300 | 31 | -- | K03088 | rpoE | sigX; RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sgx:H4W23_17935(263) | 173 | 30.6 | 300 | 23 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > snk:CP967_19315(262) | 173 | 30.6 | 300 | 21 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > staa:LDH80_22655(263) | 173 | 30.6 | 300 | 24 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > stry:EQG64_14440(258) | 173 | 31.2 | 300 | 9 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sve:SVEN_3185(261) | 173 | 30.6 | 300 | 26 | -- | K03088 | rpoE | putative RNA polymerase ECF-subfamily sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > svt:SVTN_16575(263) | 173 | 30.6 | 300 | 20 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |