GFIT result for
mana
|
GFIT result for
mana
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| mana:MAMMFC1_02173 (188 a.a.) |
-- |
rpoE_2; ECF RNA polymerase sigma-E factor | |||||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > sted:SPTER_35610(195) | 185 | 57.3 | 704 | 1 | <> | sigD_2; ECF RNA polymerase sigma factor SigD | |||
| > puf:UFO1_3248(185) | 182 | 53.3 | 656 | 5 | -> | RNA polymerase, sigma-24 subunit, RpoE, ECF subfamily | |||
| > pft:JBW_03215(185) | 176 | 51.7 | 634 | 2 | -> | RNA polymerase, sigma-24 subunit, RpoE, ECF subfamily | |||
| > sti:Sthe_2346(181) | 180 | 36.1 | 403 | 12 | -- | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > cth:Cthe_1809(179) | 180 | 36.7 | 374 | 4 | -- | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ctx:Clo1313_2483(179) | 180 | 36.7 | 374 | 4 | -- | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > stho:QNH10_03290(183) | 152 | 37.5 | 356 | 5 | -- | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > acht:bsdcttw_13770(182) | 152 | 36.8 | 346 | 4 | -- | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > gfe:Gferi_14465(178) | 180 | 33.3 | 341 | 6 | -- | RNA polymerase subunit sigma-24 | |||
| > ccot:CCAX7_20400(214) | 191 | 36.6 | 340 | 34 | -- | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > fbl:Fbal_0724(192) | 190 | 32.6 | 338 | 1 | -- | K03088 | rpoE | RNA polymerase, sigma-24 subunit, RpoE; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ksl:OG809_35635(?) | 181 | 34.8 | 338 | 0 | -- | - | |||
| > fes:HER31_11765(193) | 190 | 32.1 | 337 | 2 | -- | K03088 | rpoE | rpoE; RNA polymerase sigma factor RpoE; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > bse:Bsel_0096(184) | 183 | 33.3 | 336 | 7 | -- | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > agat:RWV98_03235(?) | 183 | 31.7 | 331 | 0 | -- | - | |||
| > gte:GTCCBUS3UF5_16300(173) | 155 | 36.8 | 330 | 2 | -- | RNA polymerase sigma factor | |||
| > gtk:GT3570_06720(173) | 155 | 36.8 | 330 | 2 | -- | RNA polymerase subunit sigma-70 | |||
| > pmet:G4Y79_10300(211) | 172 | 36.6 | 330 | 9 | -- | sigma-70 family RNA polymerase sigma factor | |||
| > amyc:CU254_01120(232) | 185 | 34.1 | 329 | 28 | -- | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > anr:Ana3638_11575(186) | 153 | 36.6 | 329 | 1 | -- | sigma-70 family RNA polymerase sigma factor | |||
| > cmic:caldi_02990(184) | 180 | 35.0 | 328 | 9 | -- | RNA polymerase sigma factor | |||
| > dbr:Deba_0221(202) | 174 | 33.9 | 328 | 3 | -- | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > ili:K734_04100(192) | 157 | 35.7 | 325 | 2 | -- | K03088 | rpoE | RNA polymerase sigma factor RpoE; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ilo:IL0816(192) | 157 | 35.7 | 325 | 2 | -- | K03088 | rpoE | rpoE; DNA-directed RNA polymerase specialized sigma E subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > pphe:PP2015_1959(193) | 164 | 34.8 | 324 | 4 | -- | K03088 | rpoE | RNA polymerase sigma factor RpoE; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > aer:AERYTH_03095(216) | 169 | 35.5 | 323 | 6 | -- | RNA polymerase sigma70 factor | |||
| > int:RX717_13565(?) | 182 | 32.4 | 323 | 0 | -- | - | |||
| > psaz:PA25_21390(193) | 165 | 33.3 | 323 | 3 | -- | K03088 | rpoE | rpoE; RNA polymerase sigma factor RpoE; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > psua:FLK61_39520(181) | 179 | 34.6 | 323 | 7 | -- | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > dew:DGWBC_0380(205) | 182 | 35.2 | 322 | 1 | -- | putative RNA polymerase sigma factor | |||
| > pdj:D0907_12135(193) | 164 | 32.9 | 322 | 6 | -- | K03088 | rpoE | rpoE; RNA polymerase sigma factor RpoE; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > psho:KQ246_01545(193) | 164 | 32.9 | 322 | 0 | -- | K03088 | rpoE | rpoE; RNA polymerase sigma factor RpoE; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > psym:J1N51_06720(193) | 158 | 36.1 | 322 | 5 | -- | K03088 | rpoE | rpoE; RNA polymerase sigma factor RpoE; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > pfli:CTT31_11745(193) | 164 | 34.1 | 321 | 4 | -- | K03088 | rpoE | rpoE; RNA polymerase sigma factor RpoE; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > pha:PSHAa0726(193) | 172 | 33.7 | 321 | 2 | -- | K03088 | rpoE | rpoE; sigma E (sigma 24) factor of RNA polymerase, response to periplasmic stress (TetR/ArcR family) (partial match); K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > png:PNIG_a0881(207) | 172 | 33.7 | 321 | 2 | -- | K03088 | rpoE | rpoE; RNA polymerase sigma-70 factor, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ppis:B1L02_05420(193) | 164 | 34.1 | 321 | 4 | -- | K03088 | rpoE | rpoE; RNA polymerase sigma factor RpoE; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > psen:PNC201_11345(193) | 164 | 34.1 | 321 | 4 | -- | K03088 | rpoE | rpoE1; ECF RNA polymerase sigma-E factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ptn:PTRA_a0823(275) | 172 | 33.7 | 321 | 2 | -- | K03088 | rpoE | rpoE; RNA polymerase sigma-70 factor, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ael:NCTC12917_03590(193) | 186 | 31.7 | 320 | 3 | -- | K03088 | rpoE | rpoE; RNA polymerase sigma factor RpoE; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > aprt:MUY14_34215(230) | 184 | 33.2 | 320 | 50 | -- | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > arv:C7N77_07405(193) | 186 | 31.7 | 320 | 1 | -- | K03088 | rpoE | rpoE; RNA polymerase sigma factor RpoE; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > athm:L1857_04835(215) | 178 | 33.7 | 320 | 22 | -- | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > gek:kuro4_21180(196) | 183 | 34.4 | 320 | 8 | -- | K03088 | rpoE | sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > paga:PAGA_a0937(207) | 164 | 33.5 | 320 | 4 | -- | K03088 | rpoE | rpoE; RNA polymerase sigma-70 factor, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > paln:B0W48_12090(193) | 164 | 33.5 | 320 | 2 | -- | K03088 | rpoE | RNA polymerase sigma factor RpoE; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > pea:PESP_a2951(193) | 164 | 33.5 | 320 | 4 | -- | K03088 | rpoE | rpoE; RNA polymerase sigma-70 factor, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > pmaz:R5H13_12205(?) | 164 | 33.5 | 320 | 0 | -- | - | |||
| > psmm:PspMM1_24150(?) | 164 | 33.5 | 320 | 0 | -- | - | |||
| > amed:B224_0380(193) | 186 | 31.7 | 319 | 1 | -- | K03088 | rpoE | RNA polymerase sigma factor RpoE; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > pbw:D172_013765(193) | 164 | 33.5 | 319 | 1 | -- | K03088 | rpoE | RNA polymerase sigma factor RpoE; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > pcar:PC2016_2428(213) | 164 | 33.5 | 319 | 5 | -- | K03088 | rpoE | RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > arhd:VSH64_39990(?) | 187 | 31.6 | 318 | 0 | -- | - | |||
| > ariv:KYK33_16730(193) | 184 | 32.6 | 318 | 2 | -- | K03088 | rpoE | rpoE; RNA polymerase sigma factor RpoE; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > bui:AX768_18045(194) | 182 | 33.5 | 318 | 12 | -- | K03088 | rpoE | RNA polymerase subunit sigma; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > bum:AXG89_34460(194) | 182 | 33.5 | 318 | 14 | -- | K03088 | rpoE | RNA polymerase subunit sigma; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > cap:CLDAP_39000(199) | 176 | 35.8 | 318 | 7 | -- | putative RNA polymerase ECF-type sigma factor | |||
| > dku:Desku_0493(198) | 182 | 34.1 | 318 | 5 | -- | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > iab:K5X84_07250(192) | 157 | 35.0 | 318 | 2 | -- | K03088 | rpoE | rpoE; RNA polymerase sigma factor RpoE; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ncd:ACONDI_03081(193) | 181 | 33.1 | 318 | 5 | -- | K03088 | rpoE | sigX_2; ECF RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > aja:AJAP_37250(235) | 185 | 31.9 | 317 | 36 | -- | K03088 | rpoE | RNA polymerase sigma-W factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > part:PARC_a0993(193) | 164 | 33.5 | 317 | 2 | -- | K03088 | rpoE | rpoE; RNA polymerase sigma-70 factor, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > pdv:FFU37_02800(193) | 164 | 33.5 | 317 | 3 | -- | K03088 | rpoE | rpoE; RNA polymerase sigma factor RpoE; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > aall:I6G90_20355(193) | 186 | 31.2 | 316 | 3 | -- | K03088 | rpoE | rpoE; RNA polymerase sigma factor RpoE; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > amd:AMED_0475(230) | 184 | 32.6 | 316 | 51 | -- | K03088 | rpoE | rpoE; RNA polymerase sigma-70 factor, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > amm:AMES_0474(230) | 184 | 32.6 | 316 | 51 | -- | K03088 | rpoE | rpoE; RNA polymerase sigma-70 factor, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > amn:RAM_02440(230) | 184 | 32.6 | 316 | 51 | -- | K03088 | rpoE | RNA polymerase sigma-70 factor, ECF subfamily protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > amyb:BKN51_36565(236) | 185 | 31.9 | 316 | 37 | -- | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > amz:B737_0475(230) | 184 | 32.6 | 316 | 51 | -- | K03088 | rpoE | rpoE; RNA polymerase sigma-70 factor, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > aoi:AORI_0478(232) | 185 | 31.9 | 316 | 37 | -- | K03088 | rpoE | rpoE; RNA polymerase sigma-70 factor, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > gse:GT50_01065(173) | 155 | 35.5 | 316 | 2 | -- | RNA polymerase sigma 70 | |||
| > gtn:GTNG_1263(173) | 152 | 34.9 | 316 | 2 | -- | Putative RNA polymerase sigma factor | |||
| > thug:KNN16_11270(184) | 179 | 35.2 | 316 | 8 | -- | sigma-70 family RNA polymerase sigma factor | |||
| > abes:IU367_17720(193) | 184 | 32.1 | 315 | 2 | -- | K03088 | rpoE | rpoE; RNA polymerase sigma factor RpoE; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > aori:SD37_38850(243) | 185 | 31.9 | 315 | 33 | -- | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > aroo:NQK81_20425(232) | 185 | 31.9 | 315 | 39 | -- | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > pmaa:CPA52_12075(193) | 164 | 32.9 | 315 | 2 | -- | K03088 | rpoE | rpoE; RNA polymerase sigma factor RpoE; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > zal:AZF00_07165(198) | 171 | 30.4 | 315 | 3 | -- | K03088 | rpoE | RNA polymerase sigma factor RpoE; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > aal:EP13_12655(192) | 186 | 31.2 | 314 | 5 | -- | K03088 | rpoE | RNA polymerase sigma factor RpoE; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > aaus:EP12_13280(192) | 186 | 31.2 | 314 | 4 | -- | K03088 | rpoE | RNA polymerase sigma factor RpoE; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > acav:VI35_03265(193) | 186 | 31.2 | 314 | 0 | -- | K03088 | rpoE | rpoE; RNA polymerase sigma factor RpoE; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > aea:C2U39_03640(193) | 186 | 31.2 | 314 | 1 | -- | K03088 | rpoE | rpoE; RNA polymerase sigma factor RpoE; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > aeo:O23A_p4459(193) | 184 | 32.1 | 314 | 3 | -- | K03088 | rpoE | RNA polymerase sigma factor RpoE; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > aes:C2U30_10585(193) | 186 | 31.2 | 314 | 1 | -- | K03088 | rpoE | rpoE; RNA polymerase sigma factor RpoE; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > asa:ASA_3492(193) | 184 | 32.1 | 314 | 2 | -- | K03088 | rpoE | rpoE; RNA polymerase sigma factor RpoE; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > asaa:KXJ75_03540(193) | 186 | 31.2 | 314 | 1 | -- | K03088 | rpoE | rpoE; RNA polymerase sigma factor RpoE; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > asoc:CB4_00130(190) | 186 | 32.8 | 314 | 5 | -- | K03088 | rpoE | sigW_1; ECF RNA polymerase sigma factor SigW; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > pia:PI2015_2279(213) | 164 | 32.9 | 314 | 1 | -- | K03088 | rpoE | RNA polymerase sigma-70 factor, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > aem:CK911_00670(193) | 184 | 32.6 | 313 | 3 | -- | K03088 | rpoE | rpoE; RNA polymerase sigma factor RpoE; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > apel:CA267_015710(192) | 186 | 32.3 | 313 | 2 | -- | K03088 | rpoE | rpoE; RNA polymerase sigma factor RpoE; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > asr:WL1483_1608(193) | 175 | 30.9 | 313 | 2 | -- | K03088 | rpoE | rpoE; RNA polymerase sigma factor RpoE; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > dmat:Dmats_03420(307) | 183 | 32.8 | 313 | 67 | -- | sigma-70 family RNA polymerase sigma factor | |||
| > dvc:Dvina_03740(307) | 183 | 32.8 | 313 | 78 | -- | sigma-70 family RNA polymerase sigma factor | |||
| > fsh:Q2T83_02595(?) | 179 | 35.8 | 313 | 0 | -- | - | |||
| > gly:K3N28_10560(275) | 182 | 33.0 | 313 | 9 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > tbh:Tbon_05915(189) | 178 | 33.7 | 313 | 8 | -- | sigma-70 family RNA polymerase sigma factor | |||
| > aaj:BOQ57_03930(193) | 186 | 30.6 | 312 | 1 | -- | K03088 | rpoE | RNA polymerase sigma factor RpoE; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > adh:CK627_07895(193) | 186 | 30.6 | 312 | 1 | -- | K03088 | rpoE | rpoE; RNA polymerase sigma factor RpoE; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > aej:E5E97_08540(193) | 186 | 30.6 | 312 | 1 | -- | K03088 | rpoE | rpoE; RNA polymerase sigma factor RpoE; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > aha:AHA_0794(193) | 186 | 30.6 | 312 | 1 | -- | K03088 | rpoE | RNA polymerase sigma-E factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |