GFIT result for
lpf
|
GFIT result for
lpf
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| lpf:lpl2409 (227 a.a.) |
-- |
K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > lpo:LPO_2678(227) | 227 | 99.6 | 1445 | 0 | <> | K03630 | radC | radC; putative protein associated with replication fork, DNA repair protein; K03630 DNA repair protein RadC | |
| > lph:LPV_2814(227) | 227 | 98.7 | 1441 | 0 | <> | K03630 | radC | radC; putative protein associated with replication fork, DNA repair protein; K03630 DNA repair protein RadC | |
| > lpp:lpp2553(227) | 227 | 98.7 | 1441 | 0 | <> | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > lpe:lp12_2481(227) | 227 | 99.1 | 1436 | 0 | <- | K03630 | radC | DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > lpm:LP6_2519(227) | 227 | 99.1 | 1436 | 0 | <- | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > lpn:lpg2489(227) | 227 | 99.1 | 1436 | 0 | <- | K03630 | radC | DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > lpu:LPE509_00572(227) | 227 | 99.1 | 1436 | 0 | <> | K03630 | radC | DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > lpa:lpa_03626(227) | 227 | 98.2 | 1429 | 0 | <> | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > lpc:LPC_1989(227) | 227 | 98.2 | 1429 | 0 | <> | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > lant:TUM19329_30090(227) | 227 | 78.9 | 1200 | 0 | <- | K03630 | radC | UPF0758 protein; K03630 DNA repair protein RadC | |
| > lly:J2N86_03545(227) | 227 | 78.0 | 1180 | 0 | <- | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > lcj:NCTC11976_00161(228) | 226 | 78.8 | 1164 | 0 | <- | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > lfa:LFA_3352(227) | 227 | 75.3 | 1141 | 0 | <> | K03630 | radC | protein of unknown function [Uncharacterised protein family RadC]; K03630 DNA repair protein RadC | |
| > lsh:CAB17_01805(233) | 226 | 73.9 | 1106 | 0 | <- | K03630 | radC | JAB domain-containing protein; K03630 DNA repair protein RadC | |
| > lwa:SAMEA4504053_0944(227) | 227 | 70.5 | 1064 | 0 | <> | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > tmc:LMI_0642(227) | 227 | 70.0 | 1059 | 0 | <- | K03630 | radC | conserved protein of unknown function; K03630 DNA repair protein RadC | |
| > lib:E4T55_04935(227) | 227 | 71.8 | 1050 | 0 | <- | K03630 | radC | JAB domain-containing protein; K03630 DNA repair protein RadC | |
| > llg:44548918_00387(227) | 227 | 68.7 | 1046 | 0 | <- | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > ljr:NCTC11533_00394(227) | 227 | 67.8 | 1026 | 0 | <- | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > lcd:clem_12835(228) | 216 | 67.6 | 995 | 0 | <- | K03630 | radC | hypothetical protein; K03630 DNA repair protein RadC | |
| > lcad:PXX05_00780(228) | 216 | 66.7 | 992 | 0 | <- | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > lha:LHA_0490(228) | 220 | 64.5 | 986 | 0 | <- | K03630 | radC | conserved protein of unknown function; K03630 DNA repair protein RadC | |
| > lok:Loa_00698(226) | 219 | 65.8 | 983 | 0 | <- | K03630 | radC | radC; DNA repair protein radC; K03630 DNA repair protein RadC | |
| > llo:LLO_3064(191) | 184 | 75.0 | 943 | 0 | <- | K03630 | radC | radC; DNA repair protein RadC (start is missing); K03630 DNA repair protein RadC | |
| > ladl:NCTC12735_00519(226) | 219 | 63.5 | 924 | 0 | <- | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > oai:OLEAN_C38490(224) | 212 | 54.2 | 695 | 1 | <- | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > tgr:Tgr7_0100(223) | 209 | 55.0 | 694 | 2 | -- | K03630 | radC | DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > hch:HCH_01020(224) | 212 | 50.5 | 693 | 6 | <- | K03630 | radC | DNA repair protein; K03630 DNA repair protein RadC | |
| > hahe:ENC22_04240(224) | 212 | 50.5 | 689 | 3 | <- | K03630 | radC | JAB domain-containing protein; K03630 DNA repair protein RadC | |
| > hahh:O5O45_21175(?) | 212 | 50.5 | 689 | 0 | -- | - | |||
| > vcy:IX92_15405(224) | 212 | 52.4 | 687 | 2 | <- | K03630 | radC | hypothetical protein; K03630 DNA repair protein RadC | |
| > vaq:FIV01_00720(221) | 212 | 52.8 | 686 | 0 | <- | K03630 | radC | hypothetical protein; K03630 DNA repair protein RadC | |
| > tni:TVNIR_0395(223) | 209 | 53.1 | 685 | 0 | <- | K03630 | radC | radC_[C]; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > vct:JV59_38665(224) | 212 | 51.9 | 682 | 1 | <- | K03630 | radC | hypothetical protein; K03630 DNA repair protein RadC | |
| > hhc:M911_00775(223) | 209 | 52.2 | 681 | 2 | -- | K03630 | radC | hypothetical protein; K03630 DNA repair protein RadC | |
| > ebs:ECTOBSL9_0924(223) | 209 | 52.2 | 679 | 1 | -- | K03630 | radC | hypothetical protein; K03630 DNA repair protein RadC | |
| > pnn:KEM63_16325(224) | 209 | 51.7 | 679 | 1 | <- | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > meiy:MIN45_P0260(225) | 212 | 51.4 | 677 | 0 | <- | K03630 | radC | DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > mcau:MIT9_P2262(?) | 212 | 51.4 | 676 | 0 | -- | - | |||
| > mein:methR_P3848(224) | 210 | 50.5 | 676 | 0 | <- | K03630 | radC | DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > tti:THITH_15670(223) | 209 | 52.6 | 675 | 2 | <- | K03630 | radC | hypothetical protein; K03630 DNA repair protein RadC | |
| > mmaf:GCM100_17650(?) | 206 | 50.5 | 674 | 0 | -- | - | |||
| > veu:IXK98_09245(222) | 212 | 51.4 | 674 | 1 | <- | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > pds:CAY62_13505(224) | 212 | 52.4 | 673 | 0 | <- | K03630 | radC | hypothetical protein; K03630 DNA repair protein RadC | |
| > harr:HV822_09325(224) | 206 | 51.5 | 671 | 2 | <- | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > mtha:VSX76_16115(?) | 206 | 50.0 | 671 | 0 | -- | - | |||
| > bacz:KFF03_02175(224) | 212 | 50.9 | 670 | 0 | <- | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > vfi:VF_0126(224) | 212 | 50.5 | 670 | 2 | <- | K03630 | radC | yicR; protein associated with replication fork, possible DNA repair protein; K03630 DNA repair protein RadC | |
| > vjp:NP165_12530(224) | 212 | 50.5 | 670 | 0 | <- | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > tani:J8380_12195(223) | 209 | 49.3 | 669 | 0 | <- | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > this:HZT40_06555(223) | 209 | 50.7 | 669 | 1 | <- | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > tun:J9260_07545(223) | 209 | 49.3 | 669 | 1 | <- | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > vbr:A6E01_12360(224) | 212 | 52.8 | 668 | 1 | <- | K03630 | radC | hypothetical protein; K03630 DNA repair protein RadC | |
| > mke:OOT55_12935(224) | 224 | 49.6 | 667 | 1 | <- | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > ntt:TAO_1780(224) | 209 | 52.2 | 667 | 0 | -- | K03630 | radC | DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > pcq:PcP3B5_60530(224) | 224 | 48.7 | 667 | 0 | <- | K03630 | radC | hypothetical protein; K03630 DNA repair protein RadC | |
| > vfm:VFMJ11_0123(224) | 212 | 50.5 | 667 | 0 | <- | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > vsi:MTO69_00525(228) | 212 | 50.9 | 667 | 0 | <- | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > vvl:VV93_v1c02770(224) | 212 | 51.4 | 667 | 3 | -- | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > vvm:VVMO6_02821(224) | 212 | 51.4 | 667 | 0 | -- | K03630 | radC | DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > vvu:VV1_0825(224) | 212 | 51.4 | 667 | 0 | -- | K03630 | radC | DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > vvy:VV0285(224) | 212 | 51.4 | 667 | 3 | -- | K03630 | radC | DNA repair protein; K03630 DNA repair protein RadC | |
| > hha:Hhal_2301(224) | 206 | 51.0 | 666 | 2 | -- | K03630 | radC | DNA replication and repair protein RadC; K03630 DNA repair protein RadC | |
| > pgb:H744_2c0469(224) | 212 | 51.9 | 666 | 1 | <- | K03630 | radC | DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > ariv:KYK33_19445(224) | 212 | 50.9 | 665 | 2 | <- | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > ppha:BVH74_05330(224) | 207 | 50.7 | 665 | 0 | <- | K03630 | radC | hypothetical protein; K03630 DNA repair protein RadC | |
| > dce:O6P33_01085(224) | 212 | 49.1 | 664 | 0 | <- | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > ppr:PBPRA0202(224) | 213 | 51.6 | 664 | 0 | <- | K03630 | radC | CV3079; putative DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > saly:E8E00_12745(227) | 212 | 52.4 | 664 | 1 | <- | K03630 | radC | JAB domain-containing protein; K03630 DNA repair protein RadC | |
| > scot:HBA18_00775(227) | 212 | 52.4 | 664 | 0 | <- | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > spro:N7E60_00890(227) | 212 | 52.4 | 664 | 0 | <- | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > tlo:J9253_04860(223) | 209 | 49.3 | 664 | 0 | <- | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > tsb:HMY34_02200(223) | 209 | 49.8 | 664 | 0 | <- | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > twn:L2Y54_16820(223) | 209 | 49.8 | 664 | 1 | <- | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > vtu:IX91_00560(214) | 212 | 50.9 | 664 | 3 | <- | K03630 | radC | hypothetical protein; K03630 DNA repair protein RadC | |
| > vcw:GJQ55_12655(224) | 224 | 48.7 | 663 | 1 | <- | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > bsan:CHH28_02995(224) | 212 | 50.9 | 662 | 0 | <- | K03630 | radC | hypothetical protein; K03630 DNA repair protein RadC | |
| > sgla:FJ709_18170(225) | 226 | 48.2 | 662 | 1 | <- | K03630 | radC | JAB domain-containing protein; K03630 DNA repair protein RadC | |
| > msze:MSZNOR_2513(?) | 210 | 49.5 | 661 | 0 | -- | - | |||
| > tee:Tel_03835(224) | 210 | 51.9 | 661 | 1 | <- | K03630 | radC | hypothetical protein; K03630 DNA repair protein RadC | |
| > haes:LO767_15740(224) | 206 | 51.0 | 660 | 2 | <- | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > hak:KO116_03809(224) | 224 | 47.8 | 660 | 4 | <- | K03630 | radC | DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > half:QEN58_02340(224) | 224 | 47.8 | 660 | 0 | <- | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > nwa:Nwat_0334(224) | 209 | 50.7 | 660 | 0 | -- | K03630 | radC | DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > pgh:FH974_00720(224) | 212 | 50.9 | 660 | 0 | -- | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > tdu:QJT80_11875(?) | 209 | 49.3 | 660 | 0 | -- | - | |||
| > tkm:TK90_2291(242) | 203 | 51.7 | 660 | 0 | -- | K03630 | radC | DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > vas:GT360_01105(214) | 212 | 50.9 | 660 | 0 | <- | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > vmt:QYQ96_12745(?) | 212 | 51.9 | 660 | 0 | -- | - | |||
| > nik:F5I99_17800(224) | 212 | 50.0 | 659 | 1 | -- | K03630 | radC | JAB domain-containing protein; K03630 DNA repair protein RadC | |
| > vsa:VSAL_I0192(224) | 212 | 50.0 | 659 | 1 | <- | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > vzi:G5S32_14140(224) | 212 | 51.4 | 659 | 1 | -- | K03630 | radC | JAB domain-containing protein; K03630 DNA repair protein RadC | |
| > kak:Kalk_10235(224) | 206 | 50.0 | 658 | 0 | <- | K03630 | radC | hypothetical protein; K03630 DNA repair protein RadC | |
| > lag:N175_01970(224) | 212 | 50.9 | 658 | 1 | <- | K03630 | radC | hypothetical protein; K03630 DNA repair protein RadC | |
| > ocm:CBP12_09455(224) | 214 | 50.9 | 658 | 2 | <- | K03630 | radC | hypothetical protein; K03630 DNA repair protein RadC | |
| > sks:FCN78_00900(227) | 212 | 51.9 | 658 | 0 | <- | K03630 | radC | JAB domain-containing protein; K03630 DNA repair protein RadC | |
| > slim:SCL_0477(224) | 221 | 48.0 | 658 | 0 | <- | K03630 | radC | hypothetical protein; K03630 DNA repair protein RadC | |
| > tvr:TVD_12360(223) | 203 | 50.7 | 658 | 1 | -- | K03630 | radC | hypothetical protein; K03630 DNA repair protein RadC | |
| > van:VAA_02455(224) | 212 | 50.9 | 658 | 1 | <- | K03630 | radC | RadC; K03630 DNA repair protein RadC | |
| > vau:VANGNB10_cI2548c(224) | 212 | 50.9 | 658 | 1 | <- | K03630 | radC | UPF0758 protein VC0395_A2597; K03630 DNA repair protein RadC | |