GFIT result for
lsh
|
GFIT result for
lsh
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| lsh:CAB17_01805 (233 a.a.) |
-- |
K03630 | radC | JAB domain-containing protein; K03630 DNA repair protein RadC | |||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > llo:LLO_3064(191) | 191 | 95.3 | 1189 | 0 | <> | K03630 | radC | radC; DNA repair protein RadC (start is missing); K03630 DNA repair protein RadC | |
| > lcj:NCTC11976_00161(228) | 228 | 81.6 | 1181 | 0 | <- | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > lly:J2N86_03545(227) | 227 | 79.7 | 1178 | 0 | <> | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > lant:TUM19329_30090(227) | 227 | 79.7 | 1175 | 0 | <- | K03630 | radC | UPF0758 protein; K03630 DNA repair protein RadC | |
| > lfa:LFA_3352(227) | 227 | 77.1 | 1149 | 0 | <- | K03630 | radC | protein of unknown function [Uncharacterised protein family RadC]; K03630 DNA repair protein RadC | |
| > lpe:lp12_2481(227) | 226 | 73.9 | 1112 | 0 | <- | K03630 | radC | DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > lpm:LP6_2519(227) | 226 | 73.9 | 1112 | 0 | <- | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > lpn:lpg2489(227) | 226 | 73.9 | 1112 | 0 | <- | K03630 | radC | DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > lpu:LPE509_00572(227) | 226 | 73.9 | 1112 | 0 | <- | K03630 | radC | DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > lpo:LPO_2678(227) | 226 | 73.9 | 1111 | 0 | <- | K03630 | radC | radC; putative protein associated with replication fork, DNA repair protein; K03630 DNA repair protein RadC | |
| > lph:LPV_2814(227) | 226 | 73.5 | 1110 | 0 | <- | K03630 | radC | radC; putative protein associated with replication fork, DNA repair protein; K03630 DNA repair protein RadC | |
| > lpp:lpp2553(227) | 226 | 73.5 | 1110 | 0 | <- | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > lpa:lpa_03626(227) | 226 | 73.9 | 1109 | 0 | <- | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > lpc:LPC_1989(227) | 226 | 73.9 | 1109 | 0 | <- | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > lpf:lpl2409(227) | 226 | 73.9 | 1106 | 0 | <- | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > lha:LHA_0490(228) | 223 | 69.1 | 1044 | 0 | <- | K03630 | radC | conserved protein of unknown function; K03630 DNA repair protein RadC | |
| > lwa:SAMEA4504053_0944(227) | 227 | 68.7 | 1039 | 0 | <- | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > tmc:LMI_0642(227) | 227 | 67.8 | 1029 | 0 | <- | K03630 | radC | conserved protein of unknown function; K03630 DNA repair protein RadC | |
| > lcd:clem_12835(228) | 218 | 67.9 | 1027 | 0 | <- | K03630 | radC | hypothetical protein; K03630 DNA repair protein RadC | |
| > llg:44548918_00387(227) | 221 | 68.8 | 1026 | 0 | <- | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > lcad:PXX05_00780(228) | 218 | 69.7 | 1020 | 0 | <- | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > ljr:NCTC11533_00394(227) | 218 | 67.9 | 1012 | 0 | <- | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > lok:Loa_00698(226) | 215 | 66.5 | 980 | 0 | <- | K03630 | radC | radC; DNA repair protein radC; K03630 DNA repair protein RadC | |
| > lib:E4T55_04935(227) | 216 | 67.1 | 971 | 0 | <- | K03630 | radC | JAB domain-containing protein; K03630 DNA repair protein RadC | |
| > ladl:NCTC12735_00519(226) | 225 | 60.0 | 921 | 0 | <- | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > hch:HCH_01020(224) | 213 | 51.2 | 721 | 6 | <- | K03630 | radC | DNA repair protein; K03630 DNA repair protein RadC | |
| > hahe:ENC22_04240(224) | 213 | 50.7 | 714 | 3 | <- | K03630 | radC | JAB domain-containing protein; K03630 DNA repair protein RadC | |
| > hahh:O5O45_21175(?) | 213 | 50.7 | 714 | 0 | -- | - | |||
| > tni:TVNIR_0395(223) | 205 | 53.7 | 709 | 0 | <- | K03630 | radC | radC_[C]; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > hhc:M911_00775(223) | 203 | 52.7 | 698 | 2 | -- | K03630 | radC | hypothetical protein; K03630 DNA repair protein RadC | |
| > tti:THITH_15670(223) | 203 | 53.2 | 698 | 2 | <- | K03630 | radC | hypothetical protein; K03630 DNA repair protein RadC | |
| > ebs:ECTOBSL9_0924(223) | 203 | 52.7 | 696 | 1 | -- | K03630 | radC | hypothetical protein; K03630 DNA repair protein RadC | |
| > vcy:IX92_15405(224) | 213 | 49.8 | 695 | 2 | <- | K03630 | radC | hypothetical protein; K03630 DNA repair protein RadC | |
| > this:HZT40_06555(223) | 203 | 50.7 | 690 | 1 | <- | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > vct:JV59_38665(224) | 213 | 49.3 | 690 | 1 | <- | K03630 | radC | hypothetical protein; K03630 DNA repair protein RadC | |
| > mcau:MIT9_P2262(?) | 213 | 48.8 | 686 | 0 | -- | - | |||
| > meiy:MIN45_P0260(225) | 213 | 48.8 | 686 | 0 | <- | K03630 | radC | DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > ntt:TAO_1780(224) | 213 | 51.2 | 681 | 0 | -- | K03630 | radC | DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > vsi:MTO69_00525(228) | 224 | 46.9 | 681 | 0 | <- | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > pnn:KEM63_16325(224) | 205 | 50.2 | 679 | 1 | <- | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > ppha:BVH74_05330(224) | 206 | 51.0 | 679 | 0 | <- | K03630 | radC | hypothetical protein; K03630 DNA repair protein RadC | |
| > tdu:QJT80_11875(?) | 203 | 48.3 | 679 | 0 | -- | - | |||
| > vaq:FIV01_00720(221) | 213 | 49.8 | 679 | 0 | <- | K03630 | radC | hypothetical protein; K03630 DNA repair protein RadC | |
| > vjp:NP165_12530(224) | 213 | 48.8 | 679 | 0 | <- | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > hha:Hhal_2301(224) | 206 | 49.5 | 678 | 2 | -- | K03630 | radC | DNA replication and repair protein RadC; K03630 DNA repair protein RadC | |
| > lag:N175_01970(224) | 213 | 49.8 | 678 | 1 | <- | K03630 | radC | hypothetical protein; K03630 DNA repair protein RadC | |
| > msze:MSZNOR_2513(?) | 205 | 49.3 | 678 | 0 | -- | - | |||
| > van:VAA_02455(224) | 213 | 49.8 | 678 | 1 | <- | K03630 | radC | RadC; K03630 DNA repair protein RadC | |
| > vau:VANGNB10_cI2548c(224) | 213 | 49.8 | 678 | 1 | <- | K03630 | radC | UPF0758 protein VC0395_A2597; K03630 DNA repair protein RadC | |
| > afy:BW247_12905(?) | 203 | 52.2 | 677 | 0 | -- | - | |||
| > vqi:CCZ37_12610(224) | 213 | 49.8 | 677 | 0 | -- | K03630 | radC | JAB domain-containing protein; K03630 DNA repair protein RadC | |
| > mke:OOT55_12935(224) | 213 | 49.8 | 676 | 1 | <- | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > mtha:VSX76_16115(?) | 206 | 50.0 | 676 | 0 | -- | - | |||
| > ttu:TERTU_0184(224) | 213 | 47.9 | 675 | 0 | <- | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > vvl:VV93_v1c02770(224) | 213 | 49.8 | 675 | 3 | -- | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > vvm:VVMO6_02821(224) | 213 | 49.8 | 675 | 0 | -- | K03630 | radC | DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > vvu:VV1_0825(224) | 213 | 49.8 | 675 | 0 | -- | K03630 | radC | DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > vvy:VV0285(224) | 213 | 49.8 | 675 | 3 | -- | K03630 | radC | DNA repair protein; K03630 DNA repair protein RadC | |
| > ajp:AMJAP_0810(226) | 206 | 49.5 | 674 | 0 | <- | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > mmaf:GCM100_17650(?) | 206 | 50.0 | 674 | 0 | -- | - | |||
| > pgb:H744_2c0469(224) | 213 | 48.8 | 672 | 1 | <- | K03630 | radC | DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > saly:E8E00_12745(227) | 213 | 50.7 | 672 | 1 | <- | K03630 | radC | JAB domain-containing protein; K03630 DNA repair protein RadC | |
| > scot:HBA18_00775(227) | 213 | 50.7 | 672 | 0 | <- | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > spro:N7E60_00890(227) | 213 | 50.7 | 672 | 0 | <- | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > vfi:VF_0126(224) | 213 | 47.9 | 672 | 2 | <- | K03630 | radC | yicR; protein associated with replication fork, possible DNA repair protein; K03630 DNA repair protein RadC | |
| > misz:MishRS11D_06950(260) | 205 | 48.8 | 671 | 1 | <- | K03630 | radC | UPF0758 protein; K03630 DNA repair protein RadC | |
| > nwa:Nwat_0334(224) | 205 | 50.2 | 671 | 0 | -- | K03630 | radC | DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > vnv:IF132_14200(226) | 213 | 48.8 | 671 | 0 | -- | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > tgr:Tgr7_0100(223) | 203 | 50.7 | 670 | 2 | -- | K03630 | radC | DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > vta:A3079(224) | 213 | 49.8 | 670 | 1 | <- | K03630 | radC | yicR; protein associated with replication fork, possible DNA repair protein; K03630 DNA repair protein RadC | |
| > gsn:YC6258_01086(224) | 206 | 51.0 | 669 | 0 | -- | K03630 | radC | DNA repair protein; K03630 DNA repair protein RadC | |
| > vfm:VFMJ11_0123(224) | 213 | 47.9 | 669 | 0 | <- | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > vtu:IX91_00560(214) | 213 | 47.9 | 669 | 3 | <- | K03630 | radC | hypothetical protein; K03630 DNA repair protein RadC | |
| > wez:IC757_00355(224) | 206 | 49.5 | 668 | 0 | <- | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > bacz:KFF03_02175(224) | 213 | 47.4 | 667 | 0 | <- | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > tkm:TK90_2291(242) | 203 | 50.7 | 667 | 0 | -- | K03630 | radC | DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > vce:Vch1786_I2500(224) | 213 | 49.3 | 667 | 2 | -- | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > vcf:IR04_06015(224) | 213 | 49.3 | 667 | 2 | -- | K03630 | radC | hypothetical protein; K03630 DNA repair protein RadC | |
| > vch:VC_0217(224) | 213 | 49.3 | 667 | 2 | -- | K03630 | radC | DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > vci:O3Y_00995(224) | 213 | 49.3 | 667 | 2 | -- | K03630 | radC | hypothetical protein; K03630 DNA repair protein RadC | |
| > vcj:VCD_001399(224) | 213 | 49.3 | 667 | 3 | -- | K03630 | radC | DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > vcm:VCM66_0205(224) | 213 | 49.3 | 667 | 1 | -- | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > vco:VC0395_A2597(224) | 213 | 49.3 | 667 | 1 | -- | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > vcq:EN18_17985(224) | 213 | 49.3 | 667 | 2 | -- | K03630 | radC | hypothetical protein; K03630 DNA repair protein RadC | |
| > vcr:VC395_0249(224) | 213 | 49.3 | 667 | 1 | -- | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > vcs:MS6_0085(224) | 213 | 49.3 | 667 | 1 | -- | K03630 | radC | DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > aprs:BI364_00600(223) | 203 | 49.8 | 666 | 1 | -- | K03630 | radC | hypothetical protein; K03630 DNA repair protein RadC | |
| > tlo:J9253_04860(223) | 203 | 48.3 | 666 | 0 | <- | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > vmi:AL543_10185(224) | 213 | 49.3 | 666 | 1 | -- | K03630 | radC | JAB domain-containing protein; K03630 DNA repair protein RadC | |
| > mvs:MVIS_0141(224) | 213 | 44.6 | 665 | 0 | <- | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > pgh:FH974_00720(224) | 213 | 48.8 | 665 | 0 | -- | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > seds:AAY24_11800(224) | 206 | 51.0 | 665 | 1 | <- | K03630 | radC | hypothetical protein; K03630 DNA repair protein RadC | |
| > vcl:VCLMA_A0189(224) | 213 | 49.3 | 665 | 2 | -- | K03630 | radC | DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > vcx:VAA049_3484(224) | 213 | 49.3 | 665 | 0 | -- | K03630 | radC | DNA repair RadC family protein; K03630 DNA repair protein RadC | |
| > vcz:VAB027_3633(224) | 213 | 49.3 | 665 | 0 | -- | K03630 | radC | DNA repair RadC family protein; K03630 DNA repair protein RadC | |
| > vpl:SA104470976_02527(224) | 213 | 49.3 | 665 | 0 | -- | K03630 | radC | DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > vsa:VSAL_I0192(224) | 213 | 47.9 | 665 | 1 | <- | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > vti:CEQ48_18030(224) | 213 | 49.3 | 665 | 1 | -- | K03630 | radC | hypothetical protein; K03630 DNA repair protein RadC | |
| > mein:methR_P3848(224) | 205 | 47.8 | 664 | 0 | <- | K03630 | radC | DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > moq:HWV03_21520(224) | 213 | 44.6 | 664 | 0 | <- | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |