GFIT result for
tmc
|
GFIT result for
tmc
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| tmc:LMI_0642 (227 a.a.) |
-- |
K03630 | radC | conserved protein of unknown function; K03630 DNA repair protein RadC | |||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > llg:44548918_00387(227) | 227 | 75.3 | 1112 | 0 | -> | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > lcd:clem_12835(228) | 225 | 75.6 | 1102 | 0 | -> | K03630 | radC | hypothetical protein; K03630 DNA repair protein RadC | |
| > lha:LHA_0490(228) | 228 | 73.7 | 1095 | 0 | -> | K03630 | radC | conserved protein of unknown function; K03630 DNA repair protein RadC | |
| > lly:J2N86_03545(227) | 227 | 70.5 | 1091 | 0 | -> | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > lcad:PXX05_00780(228) | 216 | 75.5 | 1083 | 0 | -> | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > lcj:NCTC11976_00161(228) | 226 | 70.8 | 1067 | 0 | -> | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > lpf:lpl2409(227) | 227 | 70.0 | 1059 | 0 | -> | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > lant:TUM19329_30090(227) | 227 | 70.0 | 1057 | 0 | -> | K03630 | radC | UPF0758 protein; K03630 DNA repair protein RadC | |
| > lpo:LPO_2678(227) | 227 | 70.0 | 1057 | 0 | -> | K03630 | radC | radC; putative protein associated with replication fork, DNA repair protein; K03630 DNA repair protein RadC | |
| > lpe:lp12_2481(227) | 227 | 70.0 | 1056 | 0 | -> | K03630 | radC | DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > lpm:LP6_2519(227) | 227 | 70.0 | 1056 | 0 | -> | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > lpn:lpg2489(227) | 227 | 70.0 | 1056 | 0 | -> | K03630 | radC | DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > lpu:LPE509_00572(227) | 227 | 70.0 | 1056 | 0 | -> | K03630 | radC | DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > lpa:lpa_03626(227) | 227 | 70.0 | 1055 | 0 | -> | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > lpc:LPC_1989(227) | 227 | 70.0 | 1055 | 0 | -> | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > lph:LPV_2814(227) | 227 | 69.2 | 1053 | 0 | -> | K03630 | radC | radC; putative protein associated with replication fork, DNA repair protein; K03630 DNA repair protein RadC | |
| > lpp:lpp2553(227) | 227 | 69.2 | 1053 | 0 | -> | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > lfa:LFA_3352(227) | 227 | 70.0 | 1050 | 0 | -> | K03630 | radC | protein of unknown function [Uncharacterised protein family RadC]; K03630 DNA repair protein RadC | |
| > lok:Loa_00698(226) | 226 | 70.8 | 1045 | 0 | -> | K03630 | radC | radC; DNA repair protein radC; K03630 DNA repair protein RadC | |
| > ljr:NCTC11533_00394(227) | 227 | 69.6 | 1041 | 0 | -> | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > lib:E4T55_04935(227) | 227 | 70.0 | 1036 | 0 | -> | K03630 | radC | JAB domain-containing protein; K03630 DNA repair protein RadC | |
| > lwa:SAMEA4504053_0944(227) | 227 | 67.0 | 1032 | 0 | -> | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > lsh:CAB17_01805(233) | 227 | 67.8 | 1029 | 0 | -> | K03630 | radC | JAB domain-containing protein; K03630 DNA repair protein RadC | |
| > ladl:NCTC12735_00519(226) | 219 | 64.4 | 926 | 0 | -> | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > llo:LLO_3064(191) | 184 | 69.6 | 887 | 0 | -> | K03630 | radC | radC; DNA repair protein RadC (start is missing); K03630 DNA repair protein RadC | |
| > hahe:ENC22_04240(224) | 221 | 51.6 | 717 | 3 | -> | K03630 | radC | JAB domain-containing protein; K03630 DNA repair protein RadC | |
| > hahh:O5O45_21175(?) | 221 | 51.6 | 717 | 0 | -- | - | |||
| > bacz:KFF03_02175(224) | 221 | 51.1 | 711 | 0 | -> | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > saly:E8E00_12745(227) | 223 | 52.5 | 711 | 1 | -> | K03630 | radC | JAB domain-containing protein; K03630 DNA repair protein RadC | |
| > scot:HBA18_00775(227) | 223 | 52.5 | 711 | 0 | -> | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > spro:N7E60_00890(227) | 223 | 52.5 | 711 | 0 | -> | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > msze:MSZNOR_2513(?) | 214 | 52.3 | 709 | 0 | -- | - | |||
| > plei:Q9312_14780(?) | 215 | 52.1 | 709 | 0 | -- | - | |||
| > hch:HCH_01020(224) | 221 | 50.2 | 706 | 6 | -> | K03630 | radC | DNA repair protein; K03630 DNA repair protein RadC | |
| > pgh:FH974_00720(224) | 221 | 51.6 | 704 | 0 | -- | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > wez:IC757_00355(224) | 215 | 51.6 | 703 | 0 | -> | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > hha:Hhal_2301(224) | 215 | 52.6 | 702 | 2 | -- | K03630 | radC | DNA replication and repair protein RadC; K03630 DNA repair protein RadC | |
| > ntt:TAO_1780(224) | 214 | 53.7 | 702 | 0 | -- | K03630 | radC | DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > shai:LMH63_16710(?) | 209 | 53.1 | 700 | 0 | -- | - | |||
| > vcw:GJQ55_12655(224) | 221 | 52.9 | 699 | 1 | -> | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > njp:NEJAP_3306(224) | 218 | 50.5 | 698 | 0 | -> | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > tig:THII_0928(224) | 213 | 52.1 | 697 | 0 | -> | K03630 | radC | DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > nax:HC341_17415(224) | 214 | 52.3 | 696 | 2 | -> | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > nwa:Nwat_0334(224) | 207 | 53.1 | 695 | 0 | -- | K03630 | radC | DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > sks:FCN78_00900(227) | 223 | 52.0 | 694 | 0 | -> | K03630 | radC | JAB domain-containing protein; K03630 DNA repair protein RadC | |
| > cell:CBR65_14400(224) | 214 | 52.3 | 693 | 2 | -> | K03630 | radC | hypothetical protein; K03630 DNA repair protein RadC | |
| > mein:methR_P3848(224) | 214 | 50.9 | 693 | 0 | -> | K03630 | radC | DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > meiy:MIN45_P0260(225) | 221 | 50.7 | 693 | 0 | -> | K03630 | radC | DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > eps:L0Y14_14060(224) | 215 | 52.6 | 692 | 0 | -> | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > pcav:D3880_21750(224) | 221 | 51.6 | 692 | 0 | -> | K03630 | radC | JAB domain-containing protein; K03630 DNA repair protein RadC | |
| > mcau:MIT9_P2262(?) | 221 | 50.7 | 691 | 0 | -- | - | |||
| > pds:CAY62_13505(224) | 212 | 52.8 | 691 | 0 | -> | K03630 | radC | hypothetical protein; K03630 DNA repair protein RadC | |
| > nik:F5I99_17800(224) | 221 | 50.2 | 690 | 1 | -- | K03630 | radC | JAB domain-containing protein; K03630 DNA repair protein RadC | |
| > vcy:IX92_15405(224) | 212 | 50.9 | 690 | 2 | -> | K03630 | radC | hypothetical protein; K03630 DNA repair protein RadC | |
| > vfi:VF_0126(224) | 224 | 47.8 | 688 | 2 | -> | K03630 | radC | yicR; protein associated with replication fork, possible DNA repair protein; K03630 DNA repair protein RadC | |
| > pzd:KQ248_01825(224) | 221 | 51.1 | 687 | 0 | -> | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > tkm:TK90_2291(242) | 212 | 52.4 | 687 | 0 | -- | K03630 | radC | DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > vfm:VFMJ11_0123(224) | 224 | 48.2 | 687 | 0 | -> | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > pfv:Psefu_4303(224) | 221 | 51.6 | 686 | 2 | -> | K03630 | radC | DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > oai:OLEAN_C38490(224) | 221 | 51.6 | 685 | 1 | -> | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > vct:JV59_38665(224) | 212 | 50.5 | 685 | 1 | -> | K03630 | radC | hypothetical protein; K03630 DNA repair protein RadC | |
| > wma:WM2015_116(224) | 215 | 49.8 | 685 | 0 | -> | K03630 | radC | DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > ncu:F0U83_14825(224) | 214 | 50.5 | 684 | 0 | -> | K03630 | radC | JAB domain-containing protein; K03630 DNA repair protein RadC | |
| > noc:Noc_0236(224) | 207 | 53.1 | 684 | 1 | -- | K03630 | radC | DNA replication and repair protein RadC; K03630 DNA repair protein RadC | |
| > psh:Psest_3803(224) | 221 | 51.6 | 684 | 0 | -> | K03630 | radC | DNA replication and repair protein RadC; K03630 DNA repair protein RadC | |
| > pwz:J7655_20520(224) | 221 | 51.6 | 684 | 3 | -> | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > twan:HUF19_17510(224) | 221 | 52.0 | 684 | 0 | -> | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > gsn:YC6258_01086(224) | 218 | 51.4 | 683 | 0 | -- | K03630 | radC | DNA repair protein; K03630 DNA repair protein RadC | |
| > nwr:E3U44_04540(224) | 216 | 52.3 | 683 | 0 | -- | K03630 | radC | JAB domain-containing protein; K03630 DNA repair protein RadC | |
| > plal:FXN65_27150(224) | 221 | 50.7 | 683 | 1 | -> | K03630 | radC | JAB domain-containing protein; K03630 DNA repair protein RadC | |
| > bmar:HF888_01210(223) | 218 | 50.9 | 682 | 0 | -> | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > tni:TVNIR_0395(223) | 214 | 53.3 | 682 | 0 | -> | K03630 | radC | radC_[C]; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > tvr:TVD_12360(223) | 212 | 51.9 | 682 | 1 | -- | K03630 | radC | hypothetical protein; K03630 DNA repair protein RadC | |
| > pall:UYA_23455(224) | 221 | 51.6 | 681 | 5 | -- | K03630 | radC | hypothetical protein; K03630 DNA repair protein RadC | |
| > psej:HNQ25_02750(224) | 221 | 51.6 | 681 | 0 | -> | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > slim:SCL_0477(224) | 216 | 49.5 | 681 | 0 | -> | K03630 | radC | hypothetical protein; K03630 DNA repair protein RadC | |
| > tti:THITH_15670(223) | 212 | 53.8 | 681 | 2 | -> | K03630 | radC | hypothetical protein; K03630 DNA repair protein RadC | |
| > aem:CK911_16670(224) | 221 | 51.1 | 680 | 0 | -> | K03630 | radC | JAB domain-containing protein; K03630 DNA repair protein RadC | |
| > mke:OOT55_12935(224) | 221 | 50.2 | 680 | 1 | -> | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > por:APT59_21625(224) | 221 | 51.6 | 680 | 0 | -> | K03630 | radC | hypothetical protein; K03630 DNA repair protein RadC | |
| > vsi:MTO69_00525(228) | 221 | 49.8 | 680 | 0 | -> | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > ceg:D0C16_16240(224) | 214 | 51.9 | 679 | 1 | -> | K03630 | radC | JAB domain-containing protein; K03630 DNA repair protein RadC | |
| > pche:QYM18_06545(?) | 221 | 51.6 | 679 | 0 | -- | - | |||
| > pgb:H744_2c0469(224) | 221 | 50.2 | 679 | 1 | -> | K03630 | radC | DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > pmk:MDS_4706(234) | 221 | 51.6 | 679 | 5 | -> | K03630 | radC | DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > psed:DM292_16345(224) | 221 | 51.6 | 679 | 1 | -> | K03630 | radC | JAB domain-containing protein; K03630 DNA repair protein RadC | |
| > pty:JWV26_08880(224) | 221 | 51.6 | 679 | 4 | -> | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > vsa:VSAL_I0192(224) | 224 | 47.8 | 679 | 1 | -> | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > avd:AvCA6_02940(224) | 221 | 50.2 | 678 | 2 | -> | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > avl:AvCA_02940(224) | 221 | 50.2 | 678 | 2 | -> | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > avn:Avin_02940(224) | 221 | 50.2 | 678 | 2 | -> | K03630 | radC | coaBC; P-pantothenate cysteine ligase / P-pantothenoylcysteine decarboxylase; K03630 DNA repair protein RadC | |
| > pbau:OS670_10315(224) | 221 | 51.1 | 678 | 1 | -> | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > pbm:CL52_02185(224) | 221 | 50.2 | 678 | 1 | -> | K03630 | radC | hypothetical protein; K03630 DNA repair protein RadC | |
| > pphn:HU825_06995(224) | 221 | 51.1 | 678 | 2 | -> | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > ppii:QL104_30620(?) | 221 | 50.7 | 678 | 0 | -- | - | |||
| > psj:PSJM300_02305(224) | 221 | 51.1 | 678 | 1 | -> | K03630 | radC | hypothetical protein; K03630 DNA repair protein RadC | |
| > avo:AMS64_01155(224) | 221 | 50.7 | 677 | 2 | -> | K03630 | radC | hypothetical protein; K03630 DNA repair protein RadC | |
| > awd:AWOD_I_0123(224) | 224 | 47.3 | 677 | 0 | -> | K03630 | radC | DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > metu:GNH96_00530(224) | 214 | 50.9 | 677 | 0 | -> | K03630 | radC | radC; DNA repair protein RadC; K03630 DNA repair protein RadC | |
| > misz:MishRS11D_06950(260) | 214 | 50.9 | 677 | 1 | -> | K03630 | radC | UPF0758 protein; K03630 DNA repair protein RadC | |