GFIT result for
psem
|
GFIT result for
psem
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| psem:TO66_19360 (170 a.a.) |
-- |
K23514 | fecI | RNA polymerase sigma factor; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > pcz:PCL1606_24480(170) | 170 | 99.4 | 1113 | 11 | <- | K23514 | fecI | RNA polymerase sigma factor; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > pch:EY04_18940(170) | 170 | 91.8 | 1050 | 11 | <- | K23514 | fecI | RNA polymerase sigma factor; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > pchp:C4K32_3821(170) | 170 | 91.2 | 1045 | 14 | <- | K23514 | fecI | RNA polymerase ECF-type sigma factor; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > psep:C4K39_5642(170) | 170 | 89.4 | 1018 | 16 | <- | K23514 | fecI | RNA polymerase ECF-type sigma factor; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > ppii:QL104_19425(?) | 169 | 87.6 | 1002 | 0 | -- | - | |||
| > pgf:J0G10_17635(168) | 167 | 88.6 | 988 | 11 | <- | K23514 | fecI | sigma-70 family RNA polymerase sigma factor; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > ptz:HU718_013635(168) | 167 | 88.6 | 987 | 13 | <- | K23514 | fecI | sigma-70 family RNA polymerase sigma factor; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > pke:DLD99_15795(168) | 167 | 86.8 | 968 | 13 | <- | K23514 | fecI | RNA polymerase subunit sigma; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > pfit:KJY40_16380(168) | 167 | 85.6 | 959 | 11 | <- | K23514 | fecI | sigma-70 family RNA polymerase sigma factor; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > pfo:Pfl01_3126(168) | 167 | 85.6 | 959 | 11 | <- | K23514 | fecI | putative Sigma-24 (FecI) factor; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > pgy:AWU82_12565(168) | 167 | 85.6 | 959 | 11 | <- | K23514 | fecI | RNA polymerase subunit sigma; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > pym:AK972_2842(170) | 169 | 82.8 | 947 | 17 | <- | K23514 | fecI | DNA-directed RNA polymerase specialized sigma subunit, sigma24-like; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > ptol:I7845_19475(170) | 168 | 80.4 | 910 | 14 | <- | K23514 | fecI | sigma-70 family RNA polymerase sigma factor; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > pses:PSCI_4698(170) | 166 | 73.5 | 829 | 22 | <- | K23514 | fecI | RNA polymerase sigma factor; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > paep:PA1S_15435(168) | 169 | 65.7 | 708 | 14 | <- | K23514 | fecI | RNA polymerase subunit sigma; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > paeb:NCGM1900_4433(168) | 169 | 65.1 | 701 | 13 | <- | K23514 | fecI | RNA polymerase sigma factor; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > paeg:AI22_18345(168) | 169 | 65.1 | 701 | 13 | <- | K23514 | fecI | RNA polymerase sigma factor; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > pael:T223_16715(168) | 169 | 65.1 | 701 | 13 | <- | K23514 | fecI | RNA polymerase sigma factor; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > paem:U769_15025(168) | 169 | 65.1 | 701 | 14 | <- | K23514 | fecI | RNA polymerase sigma factor; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > paes:SCV20265_3337(168) | 169 | 65.1 | 701 | 13 | <- | K23514 | fecI | DNA-directed RNA polymerase specialized sigma subunit; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > paf:PAM18_2994(168) | 169 | 65.1 | 701 | 13 | <- | K23514 | fecI | RNA polymerase sigma factor; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > pag:PLES_32711(168) | 169 | 65.1 | 701 | 13 | <- | K23514 | fecI | probable sigma-70 factor, ECF subfamily; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > pdk:PADK2_15395(168) | 169 | 65.1 | 701 | 13 | <- | K23514 | fecI | RNA polymerase sigma factor; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > pnc:NCGM2_3027(168) | 169 | 65.1 | 701 | 12 | <- | K23514 | fecI | RNA polymerase sigma factor; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > prp:M062_10670(168) | 169 | 65.1 | 701 | 12 | <- | K23514 | fecI | RNA polymerase sigma factor; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > psg:G655_14850(168) | 169 | 65.1 | 701 | 14 | <- | K23514 | fecI | RNA polymerase sigma factor; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > sech:B18_22155(168) | 169 | 65.1 | 701 | 13 | <- | K23514 | fecI | RNA polymerase sigma-70 factor, ECF subfamily; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > pae:PA2050(168) | 169 | 65.1 | 700 | 14 | <- | K23514 | fecI | RNA polymerase sigma factor; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > paei:N296_2114(168) | 169 | 65.1 | 700 | 14 | <- | K23514 | fecI | RNA polymerase sigma factor, sigma-70 family protein; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > paeo:M801_2113(168) | 169 | 65.1 | 700 | 11 | <- | K23514 | fecI | RNA polymerase sigma factor, sigma-70 family protein; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > paev:N297_2114(168) | 169 | 65.1 | 700 | 14 | <- | K23514 | fecI | RNA polymerase sigma factor, sigma-70 family protein; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > pau:PA14_37990(168) | 169 | 64.5 | 697 | 12 | <- | K23514 | fecI | putative sigma-70 factor, ECF subfamily; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > paec:M802_2112(168) | 169 | 64.5 | 696 | 12 | <- | K23514 | fecI | RNA polymerase sigma factor, sigma-70 family protein; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > ppeg:KUA23_14465(170) | 155 | 61.3 | 642 | 20 | -- | K23514 | fecI | sigma-70 family RNA polymerase sigma factor; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > paeu:BN889_02291(169) | 159 | 56.0 | 630 | 11 | -- | RNA polymerase sigma factor | |||
| > acx:Achr_23920(174) | 157 | 61.8 | 627 | 4 | <- | K23514 | fecI | RNA polymerase sigma factor, ECF subfamily; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > avd:AvCA6_22650(174) | 157 | 59.9 | 619 | 12 | <- | K23514 | fecI | RNA polymerase sigma factor, ECF subfamily; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > avl:AvCA_22650(174) | 157 | 59.9 | 619 | 12 | <- | K23514 | fecI | RNA polymerase sigma factor, ECF subfamily; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > avn:Avin_22650(174) | 157 | 59.9 | 619 | 12 | <- | K23514 | fecI | RNA polymerase sigma factor, ECF subfamily; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > rsn:RSPO_m01168(218) | 160 | 56.9 | 597 | 2 | <- | K23514 | fecI | prhI; 3-compartiment signal transduction system, sigma factor prhi protein; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > rsy:RSUY_40360(169) | 160 | 56.9 | 597 | 2 | <- | K23514 | fecI | fecI_2; putative RNA polymerase sigma factor FecI; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > pre:PCA10_33230(172) | 166 | 53.6 | 593 | 8 | <- | K23514 | fecI | putative RNA polymerase ECF-type sigma factor; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > plij:KQP88_13610(176) | 156 | 55.8 | 591 | 8 | <- | K23514 | fecI | sigma-70 family RNA polymerase sigma factor; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > pci:PCH70_28190(203) | 156 | 55.1 | 588 | 9 | <- | K23514 | fecI | ECF subfamily RNA polymerase sigma factor; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > plal:FXN65_16740(172) | 166 | 54.2 | 588 | 7 | <- | K23514 | fecI | RNA polymerase sigma factor; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > biz:HC231_15360(172) | 154 | 56.5 | 586 | 1 | <- | K23514 | fecI | sigma-70 family RNA polymerase sigma factor; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > pfuw:KF707C_23740(172) | 166 | 53.0 | 586 | 10 | <- | K23514 | fecI | RNA polymerase sigma-70 factor; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > rsg:JK151_23400(169) | 160 | 56.2 | 586 | 3 | <- | K23514 | fecI | sigma-70 family RNA polymerase sigma factor; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > rsl:RPSI07_mp0795(169) | 160 | 56.2 | 586 | 3 | <- | K23514 | fecI | prhI; Regulatory protein (3-compartiment signal transduction system, sigma factor prhi transcription regulator protein); K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > rnc:GO999_18275(169) | 160 | 56.2 | 584 | 4 | <- | K23514 | fecI | sigma-70 family RNA polymerase sigma factor; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > rpu:CDC45_21860(169) | 160 | 56.2 | 584 | 3 | <- | K23514 | fecI | RNA polymerase subunit sigma; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > rse:F504_4369(169) | 160 | 56.2 | 584 | 3 | <- | K23514 | fecI | RNA polymerase sigma-70 factor; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > rso:RSp0849(169) | 160 | 56.2 | 584 | 3 | <- | K23514 | fecI | prhI; 3-compartiment signal transduction system, sigma factor prhi transcription regulator protein; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > pasg:KSS96_25430(172) | 164 | 52.4 | 581 | 12 | -- | K23514 | fecI | sigma-70 family RNA polymerase sigma factor; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > gqu:AWC35_02310(172) | 154 | 56.5 | 580 | 1 | <- | K23514 | fecI | RNA polymerase subunit sigma; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > ppsl:BJP27_01685(170) | 160 | 55.0 | 580 | 2 | <- | K23514 | fecI | RNA polymerase subunit sigma; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > bng:EH206_15880(172) | 158 | 54.4 | 577 | 0 | <- | K23514 | fecI | sigma-70 family RNA polymerase sigma factor; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > rsm:CMR15_mp10828(169) | 160 | 55.6 | 577 | 4 | <- | K23514 | fecI | prhI; Regulatory protein (3-compartiment signal transduction system, sigma factor prhi transcription regulator protein); K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > mms:mma_2030(173) | 157 | 55.4 | 575 | 14 | <- | K23514 | fecI | fecI8; RNA polymerase sigma-70 factor, ECF subfamily; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > ppuj:E2566_06410(173) | 162 | 53.7 | 573 | 4 | <- | K23514 | fecI | sigma-70 family RNA polymerase sigma factor; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > ced:LH89_15100(177) | 158 | 54.4 | 571 | 2 | <- | K23514 | fecI | RNA polymerase sigma factor; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > bgj:AWC36_10820(172) | 152 | 55.9 | 570 | 1 | <- | K23514 | fecI | RNA polymerase subunit sigma; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > ppoo:LW347_06365(173) | 162 | 53.1 | 570 | 4 | <- | K23514 | fecI | sigma-70 family RNA polymerase sigma factor; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > pvr:PverR02_27930(172) | 161 | 52.8 | 570 | 7 | -- | K23514 | fecI | RNA polymerase subunit sigma; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > psoa:PSm6_25630(?) | 167 | 50.9 | 568 | 0 | -- | - | |||
| > paj:PAJ_1882(183) | 151 | 56.3 | 566 | 0 | <- | K23514 | fecI | fecI; probable RNA polymerase sigma factor FecI; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > pam:PANA_2589(188) | 151 | 56.3 | 566 | 0 | <- | K23514 | fecI | fecI; FecI; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > paq:PAGR_g1440(183) | 151 | 56.3 | 566 | 0 | <- | K23514 | fecI | RNA polymerase sigma factor FecI; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > plf:PANA5342_1472(183) | 151 | 56.3 | 566 | 0 | <- | K23514 | fecI | fecI; RNA polymerase sigma factor; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > phf:NLY38_09640(172) | 167 | 52.1 | 564 | 5 | <- | K23514 | fecI | RNA polymerase sigma factor; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > pmy:Pmen_2673(174) | 157 | 54.8 | 563 | 4 | <- | K23514 | fecI | RNA polymerase, sigma-24 subunit, ECF subfamily; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > eca:ECA1274(173) | 162 | 52.5 | 560 | 3 | <- | K23514 | fecI | probable RNA polymerase sigma factor; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > pacb:M9782_08320(173) | 162 | 52.5 | 560 | 0 | <- | K23514 | fecI | sigma-70 family RNA polymerase sigma factor; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > pcc:PCC21_011820(173) | 162 | 52.5 | 560 | 5 | -- | K23514 | fecI | RNA polymerase sigma factor; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > pcoa:PJ912_20465(173) | 162 | 52.5 | 560 | 4 | -- | K23514 | fecI | sigma-70 family RNA polymerase sigma factor; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > pct:PC1_1151(173) | 162 | 52.5 | 560 | 4 | <- | K23514 | fecI | RNA polymerase, sigma-24 subunit, ECF subfamily; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > pcv:BCS7_05945(173) | 162 | 52.5 | 560 | 3 | -- | K23514 | fecI | RNA polymerase sigma factor; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > pvz:OA04_13340(173) | 162 | 52.5 | 560 | 5 | <- | K23514 | fecI | RNA polymerase sigma factor; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > rwe:KOL96_04320(169) | 166 | 51.8 | 560 | 1 | <- | K23514 | fecI | sigma-70 family RNA polymerase sigma factor; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > pkk:QQ992_14805(?) | 157 | 54.1 | 559 | 0 | -- | - | |||
| > pato:GZ59_13010(173) | 162 | 51.9 | 556 | 3 | <- | K23514 | fecI | putative RNA polymerase sigma factor; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > patr:EV46_06405(173) | 162 | 51.9 | 556 | 3 | <- | K23514 | fecI | RNA polymerase sigma factor; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > pcac:OI450_05090(173) | 162 | 52.5 | 554 | 4 | <- | K23514 | fecI | sigma-70 family RNA polymerase sigma factor; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > pche:QYM18_17790(?) | 167 | 51.5 | 554 | 0 | -- | - | |||
| > bstg:WT74_06950(169) | 168 | 49.4 | 553 | 3 | <- | K23514 | fecI | RNA polymerase subunit sigma; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > poj:PtoMrB4_05060(181) | 157 | 52.9 | 553 | 17 | -- | K23514 | fecI | RNA polymerase sigma factor; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > pty:JWV26_20645(174) | 157 | 54.1 | 553 | 5 | <- | K23514 | fecI | RNA polymerase sigma factor; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > pset:THL1_2336(172) | 166 | 51.2 | 551 | 4 | -- | K23514 | fecI | RNA polymerase ECF-type sigma factor; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > pez:HWQ56_18165(201) | 154 | 49.4 | 546 | 5 | -- | sigma-70 family RNA polymerase sigma factor | |||
| > pall:UYA_10360(172) | 167 | 50.3 | 545 | 1 | <- | K23514 | fecI | RNA polymerase subunit sigma; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > psej:HNQ25_14535(172) | 167 | 50.3 | 545 | 4 | <- | K23514 | fecI | RNA polymerase sigma factor; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > pkh:JLK41_10445(172) | 167 | 50.3 | 543 | 7 | <- | K23514 | fecI | RNA polymerase sigma factor; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > ppse:BN5_2415(172) | 167 | 50.3 | 543 | 1 | <- | K23514 | fecI | rpoE1; RNA polymerase sigma factor; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > pkm:PZ739_01810(172) | 167 | 47.3 | 541 | 24 | -- | K23514 | fecI | RNA polymerase sigma factor; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > plq:AA042_08000(172) | 167 | 47.9 | 541 | 13 | -- | K23514 | fecI | RNA polymerase subunit sigma; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > ppv:NJ69_16810(172) | 167 | 47.3 | 539 | 12 | <- | K23514 | fecI | RNA polymerase sigma factor; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > pazo:AYR47_04320(172) | 167 | 47.9 | 538 | 23 | -- | K23514 | fecI | RNA polymerase subunit sigma; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > pdw:BV82_1855(172) | 170 | 48.8 | 538 | 22 | -- | K23514 | fecI | RNA polymerase sigma factor; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > pff:PFLUOLIPICF710720(172) | 167 | 47.9 | 538 | 15 | -- | K23514 | fecI | RNA polymerase sigma factor; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > ptrt:HU722_0027150(172) | 167 | 47.9 | 538 | 18 | -- | K23514 | fecI | RNA polymerase sigma factor; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |