GFIT result for
rax
|
GFIT result for
rax
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| rax:KO561_00810 (181 a.a.) |
-- |
sigma-70 family RNA polymerase sigma factor | |||||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > aqt:FN924_16170(179) | 179 | 53.6 | 626 | 17 | -> | RNA polymerase sigma factor | |||
| > bwh:A9C19_02405(173) | 170 | 56.5 | 617 | 10 | -> | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > bhk:B4U37_08545(179) | 166 | 56.6 | 594 | 16 | -> | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > lyz:DCE79_08140(179) | 179 | 52.0 | 589 | 17 | -> | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > vij:JNUCC6_05180(179) | 175 | 53.1 | 586 | 11 | -> | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > psyo:PB01_07325(179) | 174 | 51.1 | 584 | 14 | -> | RNA polymerase sigma factor | |||
| > aia:AWH56_020685(179) | 173 | 50.3 | 569 | 7 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > bhai:KJK41_11910(179) | 178 | 49.4 | 563 | 12 | -> | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ssil:SOLI23_07840(184) | 170 | 47.1 | 563 | 15 | -> | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > lyb:C3943_21450(179) | 168 | 50.6 | 562 | 28 | -> | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > lpak:GDS87_19515(179) | 168 | 49.4 | 558 | 27 | -> | sigma-70 family RNA polymerase sigma factor | |||
| > bda:FSZ17_01570(178) | 174 | 51.7 | 557 | 16 | -> | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > bif:N288_04695(179) | 180 | 49.4 | 554 | 21 | -> | K03088 | rpoE | RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > menl:MVE64_26305(?) | 180 | 46.7 | 547 | 0 | -- | - | |||
| > blr:BRLA_c039330(179) | 165 | 49.1 | 539 | 14 | -- | K03088 | rpoE | sigX_4; RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > brw:GOP56_12320(179) | 165 | 49.7 | 539 | 16 | -- | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > tum:CBW65_12750(174) | 161 | 49.1 | 526 | 12 | -- | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > bmeg:BG04_5634(180) | 180 | 45.0 | 502 | 4 | -> | K03088 | rpoE | RNA polymerase sigma factor, sigma-70 family protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > bfm:BP422_21830(165) | 143 | 50.3 | 492 | 26 | -- | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ntx:NQZ71_24330(?) | 177 | 46.9 | 483 | 0 | -- | - | |||
| > bco:Bcell_3143(183) | 159 | 47.8 | 479 | 13 | -> | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > brum:NDK47_22755(?) | 168 | 45.2 | 473 | 0 | -- | - | |||
| > bbe:BBR47_10170(185) | 165 | 43.6 | 472 | 32 | -- | K03088 | rpoE | RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > bcop:JD108_07690(182) | 168 | 41.7 | 467 | 12 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > bbor:RFB14_05165(?) | 160 | 45.0 | 466 | 0 | -- | - | |||
| > bpab:PSE45_11170(180) | 159 | 43.4 | 460 | 20 | -- | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > alkl:MM271_09505(?) | 173 | 41.6 | 455 | 0 | -- | - | |||
| > hsan:MUN89_05915(?) | 167 | 44.3 | 453 | 0 | -- | - | |||
| > bpf:BpOF4_13500(176) | 162 | 44.4 | 432 | 6 | -- | K03088 | rpoE | sigX; RNA polymerase ECF-type sigma factor X; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > puk:PU629_20320(168) | 163 | 42.9 | 413 | 4 | -- | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > bchs:JNE38_27830(174) | 160 | 39.4 | 409 | 12 | -- | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > phc:BBI08_05985(177) | 158 | 44.9 | 408 | 3 | -- | K03088 | rpoE | RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > pln:Plano_1811(177) | 158 | 44.9 | 408 | 5 | -- | K03088 | rpoE | RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mjo:FOF60_12920(175) | 159 | 39.6 | 406 | 19 | -- | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > bcoh:BC6307_07440(180) | 159 | 40.3 | 404 | 23 | -- | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > pdg:BCM40_06175(177) | 158 | 44.9 | 403 | 5 | -- | K03088 | rpoE | RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > pll:I858_013835(177) | 158 | 43.0 | 401 | 6 | -- | K03088 | rpoE | RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > pfae:AJGP001_10495(177) | 158 | 43.7 | 400 | 7 | -- | K03088 | rpoE | RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > pku:AUO94_06650(177) | 158 | 43.7 | 400 | 8 | -- | K03088 | rpoE | RNA polymerase subunit sigma; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > play:DNR44_010980(177) | 163 | 42.3 | 400 | 8 | -- | K03088 | rpoE | sigX; RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > acop:RI196_11925(?) | 168 | 44.0 | 398 | 0 | -- | - | |||
| > apak:AP3564_17380(196) | 168 | 44.0 | 398 | 5 | -- | K03088 | rpoE | RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > hhd:HBHAL_3324(177) | 167 | 41.9 | 394 | 3 | -- | K03088 | rpoE | sigX; RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mdg:K8L98_16705(178) | 168 | 42.9 | 394 | 6 | -- | K03088 | rpoE | sigX; RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > pana:BBH88_10130(177) | 163 | 41.1 | 394 | 3 | -- | K03088 | rpoE | RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > lcap:ICJ70_18185(184) | 173 | 38.7 | 392 | 16 | -- | K03088 | rpoE | sigX; RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > lys:LBYS11_06020(184) | 173 | 38.7 | 392 | 12 | -- | K03088 | rpoE | RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > pgq:FK545_19445(208) | 163 | 41.1 | 392 | 2 | -- | K03088 | rpoE | sigX; RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > pks:IE339_18105(182) | 168 | 41.7 | 392 | 11 | -- | K03088 | rpoE | sigX; RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > psyb:KD050_19255(?) | 172 | 38.4 | 390 | 0 | -- | - | |||
| > grc:GI584_16110(169) | 154 | 40.3 | 389 | 12 | -- | sigma-70 family RNA polymerase sigma factor | |||
| > liu:OU989_05935(?) | 173 | 38.7 | 389 | 0 | -- | - | |||
| > ntr:B0W44_09010(178) | 166 | 38.0 | 389 | 5 | -- | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > bshi:LGQ02_10940(168) | 160 | 42.5 | 388 | 10 | -- | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > lmac:I6G82_12140(184) | 173 | 38.7 | 388 | 14 | -- | K03088 | rpoE | sigX; RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > spsy:AZE41_13660(187) | 168 | 40.5 | 388 | 13 | -- | K03088 | rpoE | RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ppla:BBI15_04845(177) | 163 | 39.3 | 387 | 3 | -- | K03088 | rpoE | RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > pdec:H1Q58_09480(177) | 163 | 39.3 | 386 | 5 | -- | K03088 | rpoE | sigX; RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > pmar:B0X71_11570(177) | 159 | 39.6 | 385 | 9 | -- | K03088 | rpoE | RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > alkg:MOJ78_01495(?) | 171 | 39.2 | 384 | 0 | -- | - | |||
| > bagr:BA6348_05915(174) | 153 | 39.2 | 384 | 12 | -- | K03088 | rpoE | RNA polymerase; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mlit:KDJ21_014455(183) | 167 | 42.5 | 384 | 10 | -- | K03088 | rpoE | sigX; RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sob:CSE16_05750(176) | 166 | 42.2 | 384 | 18 | -- | K03088 | rpoE | RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > bsj:UP17_15610(187) | 165 | 40.6 | 383 | 7 | -- | K03088 | rpoE | RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > plx:CW734_10830(177) | 163 | 39.3 | 383 | 2 | -- | K03088 | rpoE | RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > prt:AUC31_00550(177) | 163 | 39.3 | 382 | 5 | -- | K03088 | rpoE | RNA polymerase subunit sigma; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sure:SporoP32a_15635(175) | 159 | 40.9 | 382 | 5 | -- | K03088 | rpoE | RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > bou:I5818_05560(183) | 169 | 40.8 | 381 | 15 | -- | K03088 | rpoE | sigX; RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > raz:U9J35_14455(?) | 162 | 41.4 | 381 | 0 | -- | - | |||
| > lagr:FJQ98_07205(184) | 171 | 38.6 | 380 | 18 | -- | K03088 | rpoE | sigX; RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > hamy:MUO15_02600(?) | 161 | 39.1 | 379 | 0 | -- | - | |||
| > hnz:P9989_12030(177) | 163 | 41.1 | 379 | 7 | -- | K03088 | rpoE | sigX; RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > cspg:LS684_13545(182) | 170 | 41.2 | 378 | 0 | -- | K03088 | rpoE | sigX; RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > baco:OXB_2315(178) | 161 | 39.1 | 377 | 11 | -- | K03088 | rpoE | DNA-directed RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > csoa:LIS82_18440(183) | 175 | 38.9 | 377 | 18 | -- | K03088 | rpoE | sigX; RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mebz:LPC09_16370(?) | 167 | 41.9 | 377 | 0 | -- | - | |||
| > pmat:BBI11_10300(177) | 163 | 38.0 | 376 | 5 | -- | K03088 | rpoE | RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > rmf:D5E69_13725(179) | 166 | 42.2 | 376 | 5 | -- | K03088 | rpoE | sigX; RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > bon:A361_08155(178) | 167 | 40.7 | 375 | 12 | -- | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > hli:HLI_00270(180) | 158 | 41.1 | 375 | 6 | -- | K03088 | rpoE | RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > bcir:C2I06_08430(181) | 166 | 44.6 | 374 | 12 | -- | K03088 | rpoE | RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > bmur:ABE28_014470(186) | 165 | 38.2 | 374 | 5 | -- | K03088 | rpoE | RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > hshi:MUO14_00990(?) | 163 | 39.3 | 374 | 0 | -- | - | |||
| > pbut:DTO10_02510(186) | 167 | 40.7 | 374 | 8 | -- | K03088 | rpoE | RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > lfu:HR49_17600(177) | 160 | 39.4 | 373 | 8 | -- | K03088 | rpoE | RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > msem:GMB29_16775(182) | 166 | 39.8 | 373 | 3 | -- | K03088 | rpoE | sigX; RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > cfir:NAF01_07630(178) | 167 | 40.7 | 372 | 8 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > csua:IM538_15980(183) | 161 | 44.7 | 372 | 13 | -- | K03088 | rpoE | sigX; RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > lex:Len3610_06050(176) | 157 | 41.4 | 372 | 4 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mcui:G8O30_07040(179) | 156 | 42.3 | 372 | 5 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > pfri:L8956_21825(175) | 167 | 36.5 | 372 | 6 | -- | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sedd:ERJ70_10495(178) | 167 | 39.5 | 372 | 10 | -- | K03088 | rpoE | sigX; RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > baci:B1NLA3E_15005(177) | 160 | 40.6 | 371 | 2 | -- | K03088 | rpoE | RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > blen:NCTC4824_01875(177) | 160 | 38.8 | 371 | 8 | -- | K03088 | rpoE | sigX_1; RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > bvq:FHE72_14205(184) | 162 | 39.5 | 371 | 10 | -- | K03088 | rpoE | sigX; RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > cgot:J1899_14380(179) | 170 | 40.6 | 371 | 10 | -- | K03088 | rpoE | sigX; RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > msut:LC048_06185(?) | 160 | 41.9 | 371 | 0 | -- | - | |||
| > nnv:QNH39_25565(166) | 157 | 42.0 | 371 | 0 | -- | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > bacq:DOE78_11005(164) | 165 | 39.4 | 370 | 11 | -- | RNA polymerase sigma factor | |||
| > spop:SporoP37_15320(174) | 159 | 39.6 | 370 | 2 | -- | K03088 | rpoE | RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |