GFIT result for
sra
|
GFIT result for
sra
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| sra:SerAS13_0282 (704 a.a.) |
-- |
K12071 | traD | conjugative coupling factor TraD, SXT/TOL subfamily; K12071 conjugal transfer pilus assembly protein TraD | |||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > srr:SerAS9_0283(704) | 704 | 100.0 | 4618 | 1 | <> | K12071 | traD | conjugative coupling factor TraD, SXT/TOL subfamily; K12071 conjugal transfer pilus assembly protein TraD | |
| > srs:SerAS12_0283(704) | 704 | 100.0 | 4618 | 1 | <> | K12071 | traD | conjugative coupling factor TraD, SXT/TOL subfamily; K12071 conjugal transfer pilus assembly protein TraD | |
| > spe:Spro_4179(704) | 704 | 97.9 | 4542 | 3 | -- | K12071 | traD | putative plasmid transfer protein; K12071 conjugal transfer pilus assembly protein TraD | |
| > sfj:SAMEA4384070_0359(704) | 704 | 97.9 | 4534 | 0 | -> | K12071 | traD | Type IV secretory pathway, VirD4 components; K12071 conjugal transfer pilus assembly protein TraD | |
| > ypz:YPZ3_0310(704) | 704 | 97.4 | 4517 | 0 | -> | K12071 | traD | hypothetical protein; K12071 conjugal transfer pilus assembly protein TraD | |
| > snem:NLX84_21315(704) | 704 | 95.0 | 4429 | 0 | <> | K12071 | traD | traD; type IV conjugative transfer system coupling protein TraD; K12071 conjugal transfer pilus assembly protein TraD | |
| > etp:LU633_06410(704) | 704 | 94.7 | 4409 | 1 | -> | K12071 | traD | traD; type IV conjugative transfer system coupling protein TraD; K12071 conjugal transfer pilus assembly protein TraD | |
| > srhz:FO014_13915(703) | 703 | 94.0 | 4383 | 1 | -> | K12071 | traD | traD; type IV conjugative transfer system coupling protein TraD; K12071 conjugal transfer pilus assembly protein TraD | |
| > kll:BJF97_02720(701) | 703 | 91.7 | 4264 | 3 | <> | K12071 | traD | conjugative coupling factor TraD, PFGI-1 class; K12071 conjugal transfer pilus assembly protein TraD | |
| > bng:EH206_19465(701) | 703 | 91.6 | 4254 | 0 | <> | K12071 | traD | traD; type IV conjugative transfer system coupling protein TraD; K12071 conjugal transfer pilus assembly protein TraD | |
| > pano:OJ965_02165(699) | 699 | 79.4 | 3740 | 0 | <> | K12071 | traD | traD; type IV conjugative transfer system coupling protein TraD; K12071 conjugal transfer pilus assembly protein TraD | |
| > nig:C1N62_21270(?) | 699 | 78.5 | 3739 | 0 | -- | - | |||
| > kpie:N5580_22100(699) | 699 | 78.1 | 3723 | 1 | <> | K12071 | traD | traD; type IV conjugative transfer system coupling protein TraD; K12071 conjugal transfer pilus assembly protein TraD | |
| > ege:EM595_p1135(701) | 698 | 79.4 | 3716 | 0 | <> | K12071 | traD | conjugal transfer protein TraG; K12071 conjugal transfer pilus assembly protein TraD | |
| > ebi:EbC_pEb10200610(699) | 699 | 78.4 | 3709 | 0 | <> | K12071 | traD | Putative plasmid transfer protein; K12071 conjugal transfer pilus assembly protein TraD | |
| > pans:FCN45_23125(699) | 697 | 78.3 | 3709 | 1 | -> | K12071 | traD | traD; type IV conjugative transfer system coupling protein TraD; K12071 conjugal transfer pilus assembly protein TraD | |
| > xbo:XBJ1_3387(687) | 683 | 80.1 | 3701 | 1 | -> | K12071 | traD | putative plasmid transfer protein; K12071 conjugal transfer pilus assembly protein TraD | |
| > dfn:CVE23_02975(699) | 702 | 77.2 | 3698 | 0 | <> | K12071 | traD | traD; conjugative coupling factor TraD, PFGI-1 class; K12071 conjugal transfer pilus assembly protein TraD | |
| > ecq:ECED1_3574(705) | 698 | 77.9 | 3696 | 0 | -> | K12071 | traD | putative plasmid transfer protein; K12071 conjugal transfer pilus assembly protein TraD | |
| > ecls:LI67_020305(699) | 699 | 77.4 | 3692 | 1 | -> | K12071 | traD | conjugal transfer protein TraG; K12071 conjugal transfer pilus assembly protein TraD | |
| > ecly:LI62_20730(699) | 699 | 77.4 | 3692 | 1 | -> | K12071 | traD | conjugal transfer protein TraG; K12071 conjugal transfer pilus assembly protein TraD | |
| > kgr:JJJ10_03880(699) | 699 | 77.4 | 3692 | 3 | -> | K12071 | traD | traD; type IV conjugative transfer system coupling protein TraD; K12071 conjugal transfer pilus assembly protein TraD | |
| > mint:C7M51_02959(699) | 688 | 78.5 | 3688 | 0 | -> | K12071 | traD | hypothetical protein; K12071 conjugal transfer pilus assembly protein TraD | |
| > xbv:XBW1_1200(687) | 683 | 79.8 | 3688 | 3 | -- | K12071 | traD | putative plasmid transfer protein; K12071 conjugal transfer pilus assembly protein TraD | |
| > xdo:XDD1_1085(687) | 683 | 79.5 | 3688 | 1 | -- | K12071 | traD | putative plasmid transfer protein; K12071 conjugal transfer pilus assembly protein TraD | |
| > supe:P0H77_18490(699) | 699 | 77.1 | 3687 | 2 | -> | K12071 | traD | traD; type IV conjugative transfer system coupling protein TraD; K12071 conjugal transfer pilus assembly protein TraD | |
| > xbu:HGO23_14590(687) | 683 | 80.2 | 3686 | 1 | -> | K12071 | traD | traD; type IV conjugative transfer system coupling protein TraD; K12071 conjugal transfer pilus assembly protein TraD | |
| > eca:ECA0560(698) | 697 | 77.0 | 3685 | 0 | -> | K12071 | traD | putative plasmid transfer protein; K12071 conjugal transfer pilus assembly protein TraD | |
| > pato:GZ59_09430(698) | 697 | 77.0 | 3685 | 0 | -> | K12071 | traD | putative plasmid transfer protein; K12071 conjugal transfer pilus assembly protein TraD | |
| > patr:EV46_04670(698) | 697 | 77.0 | 3685 | 0 | -> | K12071 | traD | conjugal transfer protein TraG; K12071 conjugal transfer pilus assembly protein TraD | |
| > xpo:XPG1_2609(687) | 683 | 79.8 | 3685 | 0 | -> | K12071 | traD | putative plasmid transfer protein; K12071 conjugal transfer pilus assembly protein TraD | |
| > esz:FEM44_13000(698) | 683 | 79.5 | 3681 | 2 | -- | K12071 | traD | traD; type IV conjugative transfer system coupling protein TraD; K12071 conjugal transfer pilus assembly protein TraD | |
| > xho:A9255_12570(687) | 683 | 79.8 | 3679 | 0 | -> | K12071 | traD | conjugative coupling factor TraD, PFGI-1 class; K12071 conjugal transfer pilus assembly protein TraD | |
| > pcac:OI450_05890(691) | 688 | 77.5 | 3673 | 0 | -> | K12071 | traD | traD; type IV conjugative transfer system coupling protein TraD; K12071 conjugal transfer pilus assembly protein TraD | |
| > xne:XNC1_3666(688) | 684 | 79.5 | 3670 | 3 | -- | K12071 | traD | putative plasmid transfer protein; K12071 conjugal transfer pilus assembly protein TraD | |
| > xnm:XNC2_3520(688) | 684 | 79.5 | 3670 | 4 | -> | K12071 | traD | putative plasmid transfer protein; K12071 conjugal transfer pilus assembly protein TraD | |
| > paqu:DMB82_0002305(691) | 688 | 77.5 | 3668 | 0 | <> | K12071 | traD | traD; type IV conjugative transfer system coupling protein TraD; K12071 conjugal transfer pilus assembly protein TraD | |
| > caru:P0E69_01825(?) | 699 | 76.8 | 3666 | 0 | -- | - | |||
| > kob:HF650_02155(699) | 699 | 76.8 | 3666 | 0 | -> | K12071 | traD | traD; type IV conjugative transfer system coupling protein TraD; K12071 conjugal transfer pilus assembly protein TraD | |
| > pge:LG71_08240(699) | 699 | 76.8 | 3666 | 1 | -> | K12071 | traD | conjugal transfer protein TraG; K12071 conjugal transfer pilus assembly protein TraD | |
| > seec:CFSAN002050_22335(699) | 699 | 76.8 | 3666 | 1 | -> | K12071 | traD | conjugal transfer protein TraG; K12071 conjugal transfer pilus assembly protein TraD | |
| > eun:UMNK88_5027(698) | 683 | 78.8 | 3658 | 2 | -> | K12071 | traD | conserved hypothetical protein; K12071 conjugal transfer pilus assembly protein TraD | |
| > pakh:B0X70_21270(717) | 692 | 76.9 | 3582 | 1 | -> | K12071 | traD | conjugative coupling factor TraD, PFGI-1 class; K12071 conjugal transfer pilus assembly protein TraD | |
| > plui:CE143_21315(717) | 692 | 76.9 | 3582 | 1 | -> | K12071 | traD | traD; conjugative coupling factor TraD, PFGI-1 class; K12071 conjugal transfer pilus assembly protein TraD | |
| > pmr:PMI2588(715) | 701 | 73.8 | 3509 | 1 | -> | K12071 | traD | putative plasmid transfer protein; K12071 conjugal transfer pilus assembly protein TraD | |
| > ptha:OI982_17520(?) | 701 | 73.6 | 3509 | 0 | -- | - | |||
| > psta:BGK56_09135(715) | 701 | 73.6 | 3508 | 1 | -> | K12071 | traD | conjugative coupling factor TraD, PFGI-1 class; K12071 conjugal transfer pilus assembly protein TraD | |
| > xgr:QL128_14855(?) | 695 | 74.8 | 3499 | 0 | -- | - | |||
| > sfo:Z042_14150(698) | 690 | 71.9 | 3376 | 1 | -- | K12071 | traD | conjugal transfer protein TraG; K12071 conjugal transfer pilus assembly protein TraD | |
| > pwa:Pecwa_0645(703) | 695 | 71.2 | 3373 | 2 | -> | K12071 | traD | TraG-family protein; K12071 conjugal transfer pilus assembly protein TraD | |
| > elf:LF82_676(694) | 691 | 71.3 | 3368 | 1 | -- | K12071 | traD | hypothetical protein; K12071 conjugal transfer pilus assembly protein TraD | |
| > eln:NRG857_20850(694) | 691 | 71.3 | 3368 | 1 | -- | K12071 | traD | TraG-family protein; K12071 conjugal transfer pilus assembly protein TraD | |
| > ppoo:LW347_04725(703) | 693 | 71.1 | 3358 | 1 | -> | K12071 | traD | traD; type IV conjugative transfer system coupling protein TraD; K12071 conjugal transfer pilus assembly protein TraD | |
| > ppuj:E2566_04790(703) | 694 | 70.9 | 3357 | 1 | -> | K12071 | traD | traD; type IV conjugative transfer system coupling protein TraD; K12071 conjugal transfer pilus assembly protein TraD | |
| > prod:PCO85_05315(?) | 695 | 70.4 | 3353 | 0 | -- | - | |||
| > sera:Ser39006_020035(701) | 695 | 70.2 | 3343 | 0 | <> | K12071 | traD | traD; conjugative coupling factor TraD, PFGI-1 class; K12071 conjugal transfer pilus assembly protein TraD | |
| > serq:CWC46_20040(701) | 695 | 70.2 | 3343 | 0 | <> | K12071 | traD | traD; conjugative coupling factor TraD, PFGI-1 class; K12071 conjugal transfer pilus assembly protein TraD | |
| > opo:DSM2777_00675(700) | 695 | 69.8 | 3335 | 1 | -> | K12071 | traD | conjugal transfer protein TraG; K12071 conjugal transfer pilus assembly protein TraD | |
| > yen:YE3493(706) | 706 | 68.7 | 3331 | 0 | -> | K12071 | traD | TraG-family protein; K12071 conjugal transfer pilus assembly protein TraD | |
| > ysi:BF17_02645(706) | 693 | 69.7 | 3329 | 2 | -> | K12071 | traD | conjugal transfer protein TraG; K12071 conjugal transfer pilus assembly protein TraD | |
| > sfw:WN53_03575(698) | 691 | 70.9 | 3321 | 0 | <- | K12071 | traD | conjugal transfer protein TraG; K12071 conjugal transfer pilus assembly protein TraD | |
| > yca:F0T03_01925(698) | 690 | 71.0 | 3315 | 0 | <- | K12071 | traD | traD; type IV conjugative transfer system coupling protein TraD; K12071 conjugal transfer pilus assembly protein TraD | |
| > yki:HRD70_06345(698) | 690 | 71.0 | 3315 | 0 | <- | K12071 | traD | traD; type IV conjugative transfer system coupling protein TraD; K12071 conjugal transfer pilus assembly protein TraD | |
| > yhi:D5F51_18290(707) | 695 | 69.6 | 3314 | 0 | -> | K12071 | traD | traD; conjugative coupling factor TraD, PFGI-1 class; K12071 conjugal transfer pilus assembly protein TraD | |
| > ypi:YpsIP31758_3718(706) | 693 | 69.4 | 3312 | 1 | -> | K12071 | traD | conserved hypothetical protein; K12071 conjugal transfer pilus assembly protein TraD | |
| > dic:Dpoa569_002898(694) | 698 | 71.2 | 3309 | 1 | -> | K12071 | traD | traD; type IV conjugative transfer system coupling protein TraD; K12071 conjugal transfer pilus assembly protein TraD | |
| > sei:SPC_4418(696) | 694 | 69.0 | 3308 | 0 | <> | K12071 | traD | hypothetical protein; K12071 conjugal transfer pilus assembly protein TraD | |
| > sex:STBHUCCB_45100(696) | 694 | 69.0 | 3308 | 1 | <- | K12071 | traD | VirD4, Type IV secretory pathway, VirD4 component; K12071 conjugal transfer pilus assembly protein TraD | |
| > stt:t4260(696) | 694 | 69.0 | 3308 | 0 | <> | K12071 | traD | hypothetical protein; K12071 conjugal transfer pilus assembly protein TraD | |
| > sty:STY4562(696) | 694 | 69.0 | 3308 | 1 | -> | K12071 | traD | hypothetical protein; K12071 conjugal transfer pilus assembly protein TraD | |
| > sent:TY21A_21685(696) | 694 | 68.7 | 3297 | 0 | <- | K12071 | traD | hypothetical protein; K12071 conjugal transfer pilus assembly protein TraD | |
| > yfr:AW19_3648(689) | 689 | 69.5 | 3278 | 0 | -> | K12071 | traD | traD; conjugative coupling factor TraD, PFGI-1 class; K12071 conjugal transfer pilus assembly protein TraD | |
| > ykr:CH54_2142(689) | 689 | 69.5 | 3278 | 0 | -> | K12071 | traD | traD; conjugative coupling factor TraD, PFGI-1 class; K12071 conjugal transfer pilus assembly protein TraD | |
| > eic:NT01EI_0336(617) | 618 | 77.7 | 3271 | 0 | -> | K12071 | traD | hypothetical protein; K12071 conjugal transfer pilus assembly protein TraD | |
| > kpb:FH42_13185(699) | 695 | 68.3 | 3271 | 2 | -- | K12071 | traD | conjugal transfer protein TraG; K12071 conjugal transfer pilus assembly protein TraD | |
| > kpc:KPNIH10_22480(699) | 695 | 68.3 | 3271 | 1 | -- | K12071 | traD | conjugal transfer protein TraG; K12071 conjugal transfer pilus assembly protein TraD | |
| > kpg:KPNIH32_23580(699) | 695 | 68.3 | 3271 | 1 | -- | K12071 | traD | conjugal transfer protein TraG; K12071 conjugal transfer pilus assembly protein TraD | |
| > kph:KPNIH24_06325(699) | 695 | 68.3 | 3271 | 1 | -- | K12071 | traD | conjugal transfer protein TraG; K12071 conjugal transfer pilus assembly protein TraD | |
| > kpj:N559_0794(699) | 695 | 68.3 | 3271 | 0 | -- | K12071 | traD | hypothetical protein; K12071 conjugal transfer pilus assembly protein TraD | |
| > kpm:KPHS_45130(699) | 695 | 68.3 | 3271 | 1 | -- | K12071 | traD | TraG-family protein; K12071 conjugal transfer pilus assembly protein TraD | |
| > kpne:KU54_003855(699) | 695 | 68.3 | 3271 | 1 | -- | K12071 | traD | conjugal transfer protein TraG; K12071 conjugal transfer pilus assembly protein TraD | |
| > kpnu:LI86_03860(699) | 695 | 68.3 | 3271 | 1 | -- | K12071 | traD | conjugal transfer protein TraG; K12071 conjugal transfer pilus assembly protein TraD | |
| > kpq:KPR0928_21980(699) | 695 | 68.3 | 3271 | 1 | -- | K12071 | traD | conjugal transfer protein TraG; K12071 conjugal transfer pilus assembly protein TraD | |
| > kpw:KPNIH30_22725(699) | 695 | 68.3 | 3271 | 1 | -- | K12071 | traD | conjugal transfer protein TraG; K12071 conjugal transfer pilus assembly protein TraD | |
| > kpa:KPNJ1_00787(753) | 695 | 68.2 | 3265 | 1 | -- | K12071 | traD | Hypothetical protein; K12071 conjugal transfer pilus assembly protein TraD | |
| > kps:KPNJ2_00822(753) | 695 | 68.2 | 3265 | 1 | -- | K12071 | traD | Hypothetical protein; K12071 conjugal transfer pilus assembly protein TraD | |
| > kln:LH22_20360(705) | 711 | 67.8 | 3242 | 0 | -> | K12071 | traD | conjugal transfer protein TraG; K12071 conjugal transfer pilus assembly protein TraD | |
| > cama:F384_23320(703) | 709 | 68.0 | 3237 | 4 | -> | K12071 | traD | conjugal transfer protein TraG; K12071 conjugal transfer pilus assembly protein TraD | |
| > ctel:GBC03_26645(703) | 709 | 68.0 | 3237 | 1 | <> | K12071 | traD | traD; type IV conjugative transfer system coupling protein TraD; K12071 conjugal transfer pilus assembly protein TraD | |
| > ebc:C2U52_13035(703) | 709 | 68.0 | 3237 | 1 | -- | K12071 | traD | traD; conjugative coupling factor TraD, PFGI-1 class; K12071 conjugal transfer pilus assembly protein TraD | |
| > erj:EJP617_06600(703) | 709 | 67.8 | 3237 | 0 | -> | K12071 | traD | hypothetical protein; K12071 conjugal transfer pilus assembly protein TraD | |
| > toe:QMG90_03700(703) | 709 | 67.8 | 3237 | 2 | <> | traD; type IV conjugative transfer system coupling protein TraD | |||
| > spq:SPAB_05375(703) | 709 | 67.7 | 3229 | 0 | -> | K12071 | traD | hypothetical protein; K12071 conjugal transfer pilus assembly protein TraD | |
| > krd:A3780_20670(705) | 711 | 67.2 | 3213 | 0 | -> | K12071 | traD | conjugal transfer protein TraG; K12071 conjugal transfer pilus assembly protein TraD | |
| > enc:ECL_00434(705) | 711 | 66.7 | 3190 | 0 | -> | K12071 | traD | TraG-family protein; K12071 conjugal transfer pilus assembly protein TraD | |
| > pagc:BEE12_08705(704) | 704 | 67.2 | 3178 | 0 | -> | K12071 | traD | conjugative coupling factor TraD, PFGI-1 class; K12071 conjugal transfer pilus assembly protein TraD | |
| > lpop:I6N93_03900(703) | 709 | 66.7 | 3171 | 0 | -> | K12071 | traD | traD; type IV conjugative transfer system coupling protein TraD; K12071 conjugal transfer pilus assembly protein TraD | |
| > plf:PANA5342_3991(704) | 707 | 66.9 | 3168 | 1 | -> | K12071 | traD | TraG-family protein; K12071 conjugal transfer pilus assembly protein TraD | |
| > paq:PAGR_g3858(704) | 707 | 66.2 | 3151 | 0 | -> | K12071 | traD | TraG-family plasmid transfer protein; K12071 conjugal transfer pilus assembly protein TraD | |
| > prag:EKN56_12925(712) | 692 | 67.5 | 3130 | 0 | -> | K12071 | traD | traD; type IV conjugative transfer system coupling protein TraD; K12071 conjugal transfer pilus assembly protein TraD | |