Paracidovorax avenae: Acav_3908
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Entry
Acav_3908 CDS
T01445
Name
(GenBank) ATP-dependent DNA helicase, RecQ family
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
aaa
Paracidovorax avenae
Pathway
aaa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aaa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Acav_3908
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aaa03019
]
Acav_3908
03400 DNA repair and recombination proteins [BR:
aaa03400
]
Acav_3908
Enzymes [BR:
aaa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Acav_3908
Messenger RNA biogenesis [BR:
aaa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Acav_3908
DNA repair and recombination proteins [BR:
aaa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Acav_3908
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ADX47798
UniProt:
F0Q2N1
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All DBs
Position
4473153..4475024
Genome browser
AA seq
623 aa
AA seq
DB search
MPSSTAQAALQRPPSQARIQAALKQSFGLRALRPGQRDVIDRVLRGENTLAIMPTGAGKS
LCYQLPALLLAGRTVVVSPLIALMRDQCDALRERGVPAVQLHSALDAEETRAAEAAVADG
SARIVLTTPERLADAGFQALLEAGGPVGLLAVDEAHCISQWGHDFRPAFLDIAHAVPRLG
RPTVLALTATAAGPVAQDIRRQLGIPAAGVVDTGTYRPNLHYRAEQLADEKEKRDCLLRT
VKGTEGSGIVYTATVKAAEEVHALLAGAGESAGLYHGRMPAAERGEAQDRFMAGDLRVMV
ATNAFGLGIDKQDVRFVVHYQMPGGLDAYYQESGRAGRDGQPAECTLLFLRKDKAVQQFF
LAGRYPTPDDLDALYSALQSPPPGAHDGWTLDLLQQSLDRPRPKLQVALGLLRRRRIVTQ
KADGRLSLRRAGMDSEALIALLEDYAQKRTQDQDGLERMVFYAQTGGCRWELLLDYFGHA
RPAQRCGTCDNCRRIAALDAQQAIANAAASSATGAAIREKSSEKPSAAPAIVVPPAGAAV
VAGRAAAPARPAFELGMPVRVKRYGEGTVSAIASESITVAFSDGSERCFHPEYVRKARRR
RPAANDAAVAVANAEPALALRSA
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgccctcctccaccgcccaggccgctcttcagcggcctcccagccaggcccgcatccag
gcggccctgaagcaatccttcggcctgcgcgccctgcgtccgggccagcgcgatgtgatc
gaccgcgtgctgcgcggcgagaacacgctggccatcatgcccacgggtgccggcaagtcg
ctgtgctatcagttgcccgcgctgctgctcgcgggccgcacggtggtggtgtcgccgctg
atcgcgctcatgcgcgaccagtgcgatgcgctgcgcgagcgcggcgtgccggccgtgcag
ttgcacagcgcgctggacgccgaggaaacgcgcgcggccgaggcggccgtggccgacggc
agcgcgcgcatcgtgctcaccacgcccgaacgcctggcggacgccggcttccaggcgctg
ctcgaagccggcgggcccgtgggcctgctggccgtggacgaggcgcactgcatctcgcaa
tggggccacgacttccgtcccgccttcctcgacatcgcccatgccgtgccgcgcctgggc
cgcccgacggtgctcgcgctcaccgcgaccgccgcaggccccgtggcacaggacatccgc
cggcaactgggcattccggccgcgggcgtggtcgataccggcacctaccgccccaacctg
cactatcgcgccgagcagctcgccgacgagaaggaaaagcgcgactgcctgctgcgcacc
gtgaagggtaccgaaggctccggcatcgtctataccgccacggtgaaggccgcggaggaa
gtgcatgcgctgctggccggcgcgggcgaatccgcgggcctctaccacggccgcatgccg
gccgccgagcgcggcgaggcgcaggaccgtttcatggcgggcgacctgcgggtgatggtg
gccaccaacgccttcggcctgggcatcgacaagcaggacgtgcgcttcgtggtgcactac
cagatgcccggcgggctggatgcgtactaccaggaatccggccgggccgggcgggacggg
cagccggccgaatgcacgctgctcttcctgcgcaaggacaaggcggtgcagcaattcttc
ctcgccggccgctatccgacgcccgacgacctcgatgcgctctactccgcgctgcagtca
cccccgccgggtgcgcacgacggctggacgctggacctgctgcagcaatcgctggaccgg
ccgcgccccaagctgcaggtggcgctgggcctgctgcgccgccgccgcatcgtcacgcag
aaggccgacggccgcctctcgctgcgccgcgcgggcatggacagcgaggcgctgatcgcg
ttgctcgaagactacgcacaaaagcgcacgcaggaccaggacggcctcgagcgcatggtg
ttctatgcgcagacgggcggctgccggtgggaactgctgctggattacttcgggcatgcg
cgaccggcgcagcgctgcggcacctgcgacaactgccggcggatcgccgcgctcgatgca
cagcaggccatcgcgaatgccgcagcgtcgtctgccacgggggcggcgatacgagagaag
tcctcggaaaaaccatcggcagcgcccgccatcgtcgtgccgccggccggagctgccgtg
gtcgccgggcgtgctgcggcacctgcccgtcctgcgttcgaactcggcatgccggtgcgc
gtgaaacgctacggggagggcacggtcagcgcgatcgcgtcggaatcgatcaccgtggcc
ttctcggacggcagcgagcgctgcttccatccggagtacgtgcgcaaggcgcgccggcgc
cggcccgcggccaacgatgccgcggtggccgtggcgaatgcggagccggcactggcactg
cgcagcgcctga
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