Achromobacter aegrifaciens: RA224_27450
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Entry
RA224_27450 CDS
T09343
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
aaeg
Achromobacter aegrifaciens
Pathway
aaeg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aaeg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RA224_27450 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aaeg03019
]
RA224_27450 (recQ)
03400 DNA repair and recombination proteins [BR:
aaeg03400
]
RA224_27450 (recQ)
Enzymes [BR:
aaeg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RA224_27450 (recQ)
Messenger RNA biogenesis [BR:
aaeg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RA224_27450 (recQ)
DNA repair and recombination proteins [BR:
aaeg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
RA224_27450 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
Helicase_C
RecQ_Zn_bind
Motif
Other DBs
NCBI-ProteinID:
WLW60924
LinkDB
All DBs
Position
5878687..5880516
Genome browser
AA seq
609 aa
AA seq
DB search
MSDARALGVLQRVFGYESFRGDQQAIVEQVIDGGDALVLMPTGGGKSLCYQIPSLVREGT
GIVVSPLIALMQDQVDALTELGVRAAFLNSTQEWRVARDVEQAFLAGELDLLYVAPERLL
TDRCLQLLERGRIALFAIDEAHCVSQWGHDFRPEYLGLSMLHERWPDVPRIALTATATAD
TRSEIAQRLSLDDARHFVSSFDRPNIRYRIIEKNEVRKQLLEMIQTDHEGESGVVYCLSR
ARVEETAEFLCNQGIDAMPYHAGLSAQVRAANQARFLREDAVVMVATIAFGMGIDKPDVR
FVAHIDLPKSVEGYYQETGRAGRDGLPATAWLAYGLQDVVQQRRMIDESPGEESYRRRLG
QQLDAMLGLCETVECRRVRLLAYFGQQITACGNCDVCLEPPQAWDGTVAAQKVLSAVYRL
WKERGQRYGAGHIIDILRGKVTDRTKQHGHETLSVFGVGADLSDTAWRGVLRQLLAQGLL
TVDHEGYGTLALTEGSRAVLKGERQLMLRRESEKKPRSGKSGSGRPKAAAIDLPAELQPV
FEALRAWRGEVAKSHGVPAYVIFHDATLREIALAQPESMDELSHISGVGARKLEAYGEEI
LQRVARPVL
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgcgcgcgccctcggcgtgttgcagcgcgttttcggttacgaatccttccgc
ggcgaccagcaagccattgtcgaacaggtgatcgacggcggcgacgcgctggtcctcatg
cccacgggcggcggcaaatcgctctgttaccagattccgtccctggtccgcgaaggcacc
ggcatcgtcgtgtcgcccctgatcgcgctgatgcaggaccaggtcgacgccctgaccgaa
ctgggcgtgcgcgcagccttcctcaactccacccaggagtggcgggtggcccgcgacgtc
gagcaggccttcctggccggcgagctggatctgctgtacgtggcgcccgaacgcctgctg
accgaccgctgcctgcaattgctggaacgcggccgcatcgcgctgttcgccatcgacgag
gcccactgcgtgtcccagtggggccacgacttccgcccggaatacctgggcctgtcgatg
ctgcacgagcgctggccggacgtgccgcgcatcgcgctcaccgcgaccgccaccgccgac
acccgcagcgaaatcgcccagcgcctgtcgctggacgatgcgcgccacttcgtttccagt
ttcgaccgccccaacatccgctaccgcatcatcgaaaaaaacgaggtgcgcaagcaattg
ctggaaatgatccagaccgatcatgaaggcgaatccggcgtggtctattgcctgtcgcgg
gcccgcgtggaagagaccgcggagttcctgtgcaaccagggcatcgacgccatgccctat
cacgccggcctcagcgcgcaagtgcgcgccgccaaccaggcgcgcttcctgcgcgaggac
gccgtggtcatggtggccaccatcgccttcggcatgggcatcgacaagcccgacgtgcgc
ttcgtggcgcacatcgacctgcccaagtcggtggaaggctattaccaggaaaccggccgc
gccggccgcgatggactgccggccacggcctggctggcctacggcctgcaggacgtggtg
cagcagcgccgcatgatcgacgaatcgccgggcgaagagtcctaccgccgccgcctgggc
cagcagctggacgccatgctggggctctgtgaaaccgtggaatgccggcgcgtgcgtctg
ctggcctacttcggccagcagatcaccgcctgcggcaattgcgacgtctgcctggaaccg
ccccaggcctgggacggcacggttgcggcgcagaaggtgctgtccgccgtctaccgcctg
tggaaggagcgcggccagcgctatggcgccggccacatcatcgacatcctgcgcggcaag
gtcacggaccgcaccaagcagcacggccacgaaacgctgagcgtattcggcgtgggcgcg
gacctgagcgataccgcctggcgcggcgtgctgcgccagttgctggcgcaaggcctgctg
acggtggaccacgaaggctacggcaccctggccctgaccgaaggcagccgcgccgtgctc
aagggcgagcgccaattgatgctgcgccgcgaatccgaaaagaaaccgcgctcgggcaag
agcggcagcggccgccccaaggcggcggcgattgacctgccggccgaactgcagcccgta
ttcgaggccctgcgcgcctggcgcggcgaagtggccaagagccatggcgtgccggcctat
gtcatcttccacgacgccacgctgcgtgagatcgcgctggcccagcccgaatccatggac
gagctgagccacatcagcggcgtgggcgcccgcaagctggaagcctacggcgaagagatc
ctgcagcgcgtcgccaggccggtcttgtga
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