Aminobacter aminovorans: AA2016_1023
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Entry
AA2016_1023 CDS
T04343
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
aak
Aminobacter aminovorans
Pathway
aak03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
aak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AA2016_1023
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aak03400
]
AA2016_1023
Enzymes [BR:
aak01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
AA2016_1023
DNA repair and recombination proteins [BR:
aak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
AA2016_1023
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
AMS39961
LinkDB
All DBs
Position
1064199..1065005
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AA seq
268 aa
AA seq
DB search
MPFSIATWNINSVRLRMPLVERLLSEQAPDVLCLQETKCPDDQFPSAAFRKAGYEHIAFH
GQKGYHGVATVARRPLEIVEKRRFCEIDDSRHLSVRFEAGGKKVTLHNFYVPAGGDEPDV
EINPKFRHKLGFVSEMNAIRADHDEGSASVLVGDLNIAPLEHDVWSHKQLLNVVSHTPVE
TESFEAMRKAGEWVDLMRLNVPDDQKIYTWWSYRAKDWETSNRGRRLDHVWSSANLAPKL
AGIDILSAARGWERPSDHVPVIARFDLD
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgcccttttccatcgccacctggaacatcaactccgtgcgcctgcgcatgccgctggtc
gagcggctgctgagcgagcaggcgcctgacgttttgtgcctgcaggagaccaagtgtccc
gacgaccagtttccctcggcagcgttccgcaaggcaggctacgagcacatcgccttccat
ggccagaagggctaccacggcgtcgccactgtggcgcggcggccgctggagatcgtggag
aagcggcggttctgcgagatcgacgacagtcggcatttgtcggtgcgcttcgaggccggc
ggcaagaaggtgacgctgcacaatttctacgttccggccggcggcgacgagccggatgtc
gagatcaatccgaagttccgccacaagctcggcttcgtttcggagatgaacgccatccgc
gccgaccatgacgaaggttcggcttcggtgctggtcggcgacctcaacatcgcgccattg
gagcacgacgtctggtcgcacaagcaactgctcaacgtcgtcagccacacgccggtcgag
accgagagtttcgaggcgatgcgcaaggccggcgaatgggtcgatctgatgcggctcaac
gtgcccgacgaccagaagatctacacttggtggagctatcgggcgaaggactgggagacc
tccaaccgcggccgacggctcgatcacgtctggtcctcggccaatcttgcgcccaagctt
gccggcatcgacatcctgagcgccgcccgcggctgggaacggccgtcggatcatgtgcca
gtcatagcgcgcttcgacctcgactga
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