Alternaria alternata: CC77DRAFT_21542
Help
Entry
CC77DRAFT_21542 CDS
T05291
Name
(RefSeq) pseudouridine synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
aalt
Alternaria alternata
Brite
KEGG Orthology (KO) [BR:
aalt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aalt03016
]
CC77DRAFT_21542
Enzymes [BR:
aalt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
CC77DRAFT_21542
Transfer RNA biogenesis [BR:
aalt03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CC77DRAFT_21542
Prokaryotic type
CC77DRAFT_21542
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
29116286
NCBI-ProteinID:
XP_018391462
JGI:
21542
UniProt:
A0A177E3J3
LinkDB
All DBs
Position
Unknown
AA seq
621 aa
AA seq
DB search
MSDNEGPRHDNNSSNRDRGDKKRKWADKDRRNASRGGGGRHQHGSRPNKKRNMGRKEHHS
TQLDRRDRNLEQQAKYKEQEEKGEDRPALPAAFPAEEVEAEERRPKRKVAVMIGYSGTGY
KGMQIDYKQKTIEGDLFNAFVAAGAISKANASDPKKSSLVRCARTDKGVHAAGNIVSLKL
IIEEEDIVDKINSHLPDQIRVWGIQRTIGSFSCYQACDSRWYEYLIPTHSFLPPHPSSYL
GKKLEEYAEKENDVEGYRKRQAEVANFWPEVEEKHIKPILDSLDDSIRPLVLEALYNVDV
IDAPPGGDRIVDASIEHIERKTKEEKSADTAMVDGGDVTPSEQTANEVKEAIDTIQQNEP
SITLDGSTDGSRPLPEGVVNQPVLEEAIKALKRAYLDVKKAYRISPERQARVQAALDNYL
GTHRYHNYTVHKKYNDKSAQRYIKSFKVAPKPIIINDTEWLSLKVHGQSFMMHQIRKMVG
MAALTVRCGTDPEIMDKSFGNEVVRIPKAPGLGLLLERPVFESYNAKSAKQHGRDPIDFE
RYNDKIEAFKEKEIYQRIFREEAEGNQFNTFFTHLDNYKDPQFLYLTSGGIEATKRKRED
KSTQQKYQEDSEDENASGGEG
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaacgaaggccctcgccacgacaacaattcgtcgaatcgcgaccgaggcgac
aagaagcgcaaatgggccgacaaagatcgcagaaatgcttcgaggggaggtggtggacgg
caccagcatggaagccgtccgaataagaagagaaatatggggcgtaaggaacatcactcc
acccaattagaccgacgagatcgcaacctcgaacaacaggccaaatataaggagcaagaa
gagaagggcgaagataggccagctctgcctgctgccttccctgccgaggaggttgaggca
gaagagcgcaggccgaaacgcaaagtcgcagtcatgatcggctactcaggcactggctac
aagggcatgcagatcgactacaaacaaaagaccatcgaaggcgacctattcaacgctttt
gtcgcagccggtgccatatccaaggcaaacgcatcagaccccaagaaatcgtctctcgtt
cgttgcgcgcgtaccgataagggcgttcatgctgcaggcaatattgtatcgttgaagttg
atcatcgaagaggaagacatcgttgataagatcaacagccatctacctgaccagatcagg
gtttggggtatccaacgaactatcggctcattcagctgttaccaagcatgcgactctcga
tggtacgaatacttgattccgacacactcattcctcccgccgcatccttcgagctactta
ggaaagaagttggaagagtacgcggagaaagagaacgatgttgagggctatcggaagaga
caggctgaggtcgccaatttctggcctgaggtagaggagaaacacattaaacccatcttg
gactcacttgacgactcaatacgaccactggtgctagaggcactttacaatgtcgatgtg
attgatgcgccgcctggcggagatcgcatagtcgatgcctccatcgagcatatcgagcgc
aagaccaaggaagagaagtctgcggataccgcgatggtggacggaggcgacgttactcct
agcgaacagaccgcaaatgaagtcaaagaagccatcgatacgatacaacaaaacgaacct
agcattaccctcgacggctccacggacggttcccgtcctctccctgaaggtgtcgtcaac
caacccgtcctcgaagaagccatcaaagccctaaagagggcgtatctagacgtgaagaag
gcttaccgcatctcccccgagcgacaagcccgagtccaagctgcactcgacaattacctc
ggaacccaccgctaccacaactacaccgtgcacaagaagtacaacgacaagtccgcccag
cgctatatcaagagcttcaaagtcgcacctaagcctatcatcatcaacgataccgagtgg
ttgagtttgaaggtacacggtcagagttttatgatgcaccagatccgtaagatggttggt
atggctgcgttaacggtacgatgcggtaccgaccccgaaatcatggacaagagcttcggt
aacgaggttgtccggatacccaaggctcccggcctgggcttgttgctcgagaggcccgtg
tttgagtcgtacaatgcaaagtcagctaagcagcatggacgcgatcccattgatttcgag
aggtacaacgacaagattgaggctttcaaagaaaaggagatttatcagcgtatcttccgt
gaagaggcagagggcaatcagttcaatacgtttttcacgcatctggacaactacaaagat
ccacaatttctttacttgacctccggtggcatcgaagccacaaagaggaagcgtgaagac
aagtctacacaacaaaagtaccaagaagactctgaagatgagaatgccagtggtggcgaa
ggttag
DBGET
integrated database retrieval system
