Arvicola amphibius (Eurasian water vole): 119809377
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Entry
119809377 CDS
T08327
Symbol
Ncam1
Name
(RefSeq) neural cell adhesion molecule 1
KO
K06491
neural cell adhesion molecule
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp03265
Virion - Ebolavirus and Lyssavirus
aamp04514
Cell adhesion molecules
aamp05020
Prion disease
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus and Lyssavirus
119809377 (Ncam1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
119809377 (Ncam1)
09160 Human Diseases
09164 Neurodegenerative disease
05020 Prion disease
119809377 (Ncam1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aamp04131
]
119809377 (Ncam1)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
aamp04515
]
119809377 (Ncam1)
04090 CD molecules [BR:
aamp04090
]
119809377 (Ncam1)
00536 Glycosaminoglycan binding proteins [BR:
aamp00536
]
119809377 (Ncam1)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
aamp00537
]
119809377 (Ncam1)
Membrane trafficking [BR:
aamp04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
119809377 (Ncam1)
Cell adhesion molecules [BR:
aamp04515
]
Immunoglobulin superfamily
NCAM1/2
119809377 (Ncam1)
CD molecules [BR:
aamp04090
]
Proteins
119809377 (Ncam1)
Glycosaminoglycan binding proteins [BR:
aamp00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
119809377 (Ncam1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
aamp00537
]
Others
119809377 (Ncam1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
C2-set_2
Ig_6
Ig_5
C1-set
Ig_C17orf99
V-set_CD47
Adeno_E3_CR1
Pur_ac_phosph_N
Collagen_bind_2
Motif
Other DBs
NCBI-GeneID:
119809377
NCBI-ProteinID:
XP_041910649
LinkDB
All DBs
Position
3:complement(117686261..117752419)
Genome browser
AA seq
1199 aa
AA seq
DB search
MEITEQCDPNQQSPPRSRHLRPGALIFICSLDDSVYAETAEAEQGTGHMIREQVLAHVTL
KVCILSTEEIALHTQLEEGVFELNFFLFFLFFLFFPVSLQVDIVPSQGEISVGESKFFLC
QVAGEAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVVTGE
DGTQSEATVNVKIFQKLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILK
KDVRFIVLSNNYLQIRGIKKTDEGTYRCEGRILARGEINFKDIQVIVNVPPTVQARQSIV
NATANLGQSVTLVCDADGFPEPTMSWTKDGEPIEDEEEDDDKHIFSDDSSELTIRNVDKN
DEAEYVCIAENKAGEQDASIHLKVFAKPKITYVENQTAMELEEQVTLTCEASGDPIPSIT
WRTSTRNISSEEKTLDGHMVVRSHARVSSLTLKSIQYTDAGEYICTASNTIGQDSQSMYL
EVQYAPKLQGPVAVYTWEGNQVNITCEVFAYPSATISWFRDGQLLPSSNYSNIKIYNTPS
ASYLEVTPDSENDFGNYNCTAVNRIGQESLEFILVQADTPSSPSIDRVEPYSSTAQVQFD
EPEATGGVPILKYKAEWKSLGEEAWHFKWYDAKEANMEGIVTIMGLKPETRYAVRLAALN
GKGLGEISAATEFKTQPVREPSAPKLEGQMGEDGNSIKVNLIKQDDGGSPIRHYLVKYRK
LASEWKPEIRLPSGSDHVMLKSLDWNAEYEVSVVAENQQGKSKAAHFVFKTLAQPTAIPA
NGSPTTGLSTGAIVGILIVIFVLLLVVMDITCYFLNKCGLLMCIAVNLCGKAGPGAKGKD
MEEGKAAFSKDESKEPIVEVRTEEERTPNHDGGKHTEPNETTPLTEPELPADTTATVEDM
LPSATTVTTNSDTITETFATAQNSPTSETTTLTSSIAPPATAVPDSNSVPTGQATPSKGP
GVTAASSPPASAPKVAPLVDLSDTPTSTPSASNLSSTVLANQGAVLSPSTPANAGEASKV
PPASKLSPAPTPTPAGAASPLATVAAPATEAPQAKQEAPSTKGPDPEPTQPGAMKNPPEA
ATAPASPKSKAASISTTNPSQGEDLKMDEGNFKTPDIDLAKDVFAALGSPAPATGASGQA
SELAPPTADSAVPPAPAKTEKGPVEAKSESQESEAKPAPTEVKTVPNDATQTKENESKA
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
atggaaattactgaacaatgtgatcccaaccagcaaagcccacccaggtccagacacctg
aggccaggagcattaatcttcatctgcagcttagatgacagtgtttatgcagagacggct
gaagcagagcagggtacgggacacatgattagagagcaagtgcttgcacacgtgacttta
aaggtgtgcattttgtccactgaggaaattgccttgcacacacagctagaagaaggtgtg
tttgaactcaactttttccttttctttcttttctttttattttttccagtttccctgcaa
gtggatattgttcccagccaaggagaaatcagcgttggagagtccaaattcttcctgtgc
caagtggcaggagaagccaaagataaggacatctcctggttctcccccaatggggaaaag
ctgagcccaaaccagcagcggatctcggtggtgtggaacgatgatgactcctctacgctc
accatctacaacgccaatatcgatgatgccggcatctacaagtgtgtggtcactggcgag
gatggcacccagtctgaggccactgtcaacgtgaagatcttccagaagctcatgttcaag
aatgcaccaaccccacaggagttcaaggaaggggaagatgcggtaattgtgtgtgatgtg
gtcagctctctgcccccaaccatcatctggaaacacaaaggccgtgacgttatcctgaaa
aaagatgtccgattcatagtcctgtccaacaactacctgcagatccggggcatcaagaag
acagatgagggcacttaccgctgtgagggaagaatcctggcccggggggagatcaacttc
aaggacattcaggtcattgtgaatgtaccgcccaccgtccaggccagacaaagcatcgtg
aatgccactgccaacctgggccagtctgtcaccctggtgtgtgatgctgatggcttccca
gagcccaccatgagctggacaaaggatggagaacccatagaagatgaggaagaggatgat
gacaagcacatcttcagcgatgacagttctgagctgacgatcaggaacgtggacaaaaac
gacgaggctgagtacgtctgcattgctgagaacaaggctggcgagcaggatgcatccatc
cacctcaaggtctttgcaaagcccaaaatcacctatgtagagaatcagacggccatggaa
ctggaggagcaagtcactcttacctgcgaagcctcaggagaccccatcccctccatcacc
tggagaacttccacccgaaacatcagcagtgaagaaaagactctggatggacacatggtg
gtccgcagccatgctcgtgtgtcctccctaaccctgaagagcatccagtacacagatgct
ggagagtacatctgcactgccagcaacaccattggtcaggactcccagtccatgtacctt
gaagttcaatatgcccccaagctccagggccctgtggcagtgtatacttgggaagggaac
caggtgaacatcacctgtgaggtctttgcctacccaagtgccacaatctcctggttccga
gatggccagttgctgcccagctccaactacagcaatatcaagatctacaacaccccgtct
gccagctacctggaggtaacccctgactcagaaaatgactttggaaactacaattgtacg
gcagtgaaccgcattgggcaggagtccttggaattcatccttgttcaagcagacacaccg
tcttctccatccatcgaccgggtggagccatactccagcacagcgcaggtgcagtttgat
gagccagaggccacgggtggagtgcccatcctcaaatacaaggctgagtggaagtctctg
ggtgaagaagcatggcatttcaagtggtatgatgccaaagaagccaacatggaaggcatt
gtcacaatcatgggcctgaagcctgagacaaggtatgcggtccgactggcggccctcaac
ggcaagggcctgggcgagatcagtgcagccactgagttcaagacacagccagtccgggaa
cccagtgcacccaagctggaagggcagatgggagaggatgggaactccatcaaagtgaac
ctgatcaagcaggatgacggaggctccccaatcaggcactatctggtcaagtaccgaaaa
cttgcctctgagtggaaacccgaaatcaggctcccatctggcagtgaccacgtcatgctc
aagtccctggactggaacgccgagtatgaagtatctgtggtagctgagaatcagcaagga
aaatccaaggcagctcattttgtgttcaagaccttagcccagcccacggccatcccagcc
aacggcagccccaccacaggcctgagcaccggtgccatcgtgggcatcctcattgtcatc
ttcgtcctgctcctggtggtcatggacattacctgctacttcctgaacaagtgtggcctg
ctcatgtgcattgctgttaacctgtgtggcaaagctgggcccggagccaagggcaaagac
atggaggagggcaaggctgctttctcgaaagatgaatccaaagaacccatcgtggaggtc
cgaacagaggaggaacggactccaaaccatgatggaggaaagcacacagagcccaacgag
accacaccgctgacagagcccgagctgcctgctgacaccacagccactgtcgaggacatg
ctgccttctgccaccacggtcaccactaactctgacactatcaccgaaacttttgccact
gcccagaacagccccaccagtgagaccactacactgacctccagtattgccccaccggcc
acagctgtgccggactcaaattctgtgcccactggtcaggccaccccttccaaggggcct
ggtgttactgccgcatcctcgcccccagcctcggccccaaaggttgctcctcttgttgac
ctgagcgataccccgacctcaactccctctgctagcaatttgtcctccactgtcctggct
aaccaaggagctgtactcagccccagcacccctgccaacgcgggggaggcctccaaggtc
cctccagccagtaagctgtcccctgctccaacccccaccccagctggggcggccagccct
ttagcaacagtagctgcccctgccacagaagccccccaggccaagcaggaagcccccagc
accaaaggcccggacccagagcccacccagcctggcgccatgaagaacccacctgaggca
gccacagcccctgctagcccgaagagcaaggctgcctccatcagcaccacaaacccttcc
cagggcgaggacttaaaaatggacgaagggaacttcaagaccccagatattgaccttgca
aaggatgtttttgcagccctgggctctcctgctccggccactggggccagtggacaagcc
tctgagcttgctcctcccactgcagacagcgcggtgccgcctgcaccagcaaagaccgag
aagggtcctgtagaagcaaagtctgagtcccaggagtcagaagcaaagccagcgccaact
gaagtcaagacggtccccaacgatgccacacaaacaaaagagaatgagagcaaagcatga
DBGET
integrated database retrieval system
