Arvicola amphibius (Eurasian water vole): 119811788
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Entry
119811788 CDS
T08327
Symbol
Tsen54
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen54 isoform X1
KO
K15326
tRNA-splicing endonuclease subunit Sen54
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aamp03016
]
119811788 (Tsen54)
Transfer RNA biogenesis [BR:
aamp03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
119811788 (Tsen54)
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GFIT
Motif
Pfam:
tRNA_int_end_N2
tRNA_int_endo_N
Motif
Other DBs
NCBI-GeneID:
119811788
NCBI-ProteinID:
XP_038181750
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Position
4:complement(6089280..6099658)
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AA seq
524 aa
AA seq
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MEPDSEPATVEVPAGRVLSASELRAARSRSQKLPQRSHGPKDFLPDGSEAQAERLRLCRQ
ELWQLLAEERVERLGSLVAAEWRPEEGFVELKSPAGKFWQTMGYSEQGRQRLHPEEALYL
LECGSIQLFYQDLPLSIQEAYQLLLTEDTLNFLQYQVFSHLKRLGYVVRRFEPSSVVSPY
ERQLNLDGYAQCLEDGTGKRKRSSSCRSVSKKAKALQNSLPPMSGAASSPPACDHSSQYS
EKPQGSSPRKSSGLSFQALGSSEPCPALAREDVECGQENDKIKNGAKGAPKPRWNFEQIF
FPNMASDSRHTLLPAPAPELLPANVIGRGTDAASWCQKLNQRKEKLSRRDRDQQAEVQQF
REDVNADPEVQGCSSWREYKELLQRRQLQKSQPRPPHLWGQSVTPLLNPDKADSPAAVLE
HVSVLQTTHLADGGYRLLEKSRGLEISFDVYQADAVATFRKNSPGKPYVRMCISGFDEPV
PDLCSLKRLTYQSGDVPLIFALVDHGDISFYSFRDFTLPRDLEH
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggagccagactccgaacccgcgaccgtggaggttcccgcggggcgtgtgctcagcgcc
tcggaactccgggcggctcgctcgcggtcccagaagctgccccagcggtcgcatggcccc
aaggacttcctcccggacggctcggaggcccaggccgagcggctgcgcctgtgtcgccag
gagctgtggcagctgctggcggaggagcgcgtggaacgcttgggcagcttggtggccgcg
gagtggagacccgaagagggcttcgtggagttgaagtctcctgcggggaaattctggcag
accatgggctactcagagcaagggaggcagcggcttcaccccgaagaggccttgtatctg
ctggagtgtggctctattcagctcttctaccaagacctaccactgtccatccaagaggcc
taccagcttctgctgactgaggacaccttgaatttcctacaatatcaggtcttcagccac
ctgaagagactaggctacgtggttcgccggttcgagccgagctctgtcgtgtccccttac
gagaggcagcttaacttggatggctatgcccagtgcctggaggacgggactggcaagagg
aagaggagctccagctgtcggtctgttagtaagaaggctaaggctctgcagaactccctg
ccgcccatgagcggggcagcctccagcccacctgcctgtgaccacagtagccagtactca
gagaagccccaggggtcaagccccaggaagagctcaggactctcctttcaggctctgggg
tcttcagagccttgccctgctctggccagggaggatgtggagtgtggccaggagaatgat
aaaatcaagaatggagccaagggggctcctaaaccacgctggaactttgagcagatcttc
ttccccaacatggcttcagatagccgccacaccctcctgcctgccccagccccagaactt
ctccccgccaatgtcattgggcgagggacagatgctgcgtcctggtgccaaaagctgaac
cagcggaaggagaagctttcccggagagaccgggaccagcaagcagaggtgcagcagttc
cgggaggatgtgaacgcagatcccgaggtgcagggctgctccagctggcgggagtacaag
gaactgctgcagaggcgacagctgcagaagagccagccccgccctccacacctatggggc
cagtctgttactcccttgctcaaccctgataaagcagattccccagctgcggtccttgaa
catgtctctgtactgcagacaacacatcttgctgatggaggttaccggctgctggagaag
tcgagaggcttggagatcagcttcgatgtttaccaggctgacgctgtggctacattccga
aaaaacagccctggcaaaccctatgtccgaatgtgcattagtggatttgacgaacctgtc
ccagacctctgcagcctcaagcggttgacctaccagagtggggatgtccccctgatcttt
gccctggtggatcacggtgacatctccttctatagcttcagagacttcacactgcccaga
gatctggagcactga
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