Arvicola amphibius (Eurasian water vole): 119820364
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Entry
119820364 CDS
T08327
Symbol
Gigyf2
Name
(RefSeq) LOW QUALITY PROTEIN: GRB10-interacting GYF protein 2
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aamp03019
]
119820364 (Gigyf2)
Messenger RNA biogenesis [BR:
aamp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
119820364 (Gigyf2)
Surveillance factors
Other surveillance factors
119820364 (Gigyf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
Motif
Other DBs
NCBI-GeneID:
119820364
NCBI-ProteinID:
XP_038194513
LinkDB
All DBs
Position
8:complement(104588952..104727557)
Genome browser
AA seq
1299 aa
AA seq
DB search
MAAETQTLNFGPEWLRALSSGGSITSPPLSPALPKYKLADYRYGREEMLALFLKDYKIPF
DLLEKEFLPILQEDPLPPLALVPFTEEEQRNFSMSVNSAAVLRLTGRGGGGGTVVGAPRG
RSSSRGRGRGRGECGFYQRSFDEVEGVFGRGGGREMHRSQSWEERGDRRFEKPGRKDVGR
PNFEESGPTSMGRKHEFIRSESENWRIFREEQNGEDEDGGWRLAGSRRDGERWRPHSPDG
PRSTGWREHMERRRRFEFDFRDRDDERGYRRVRSGSGSVDDDRDSLPEWCLEDAEEEMGT
FDSSGAFLSLKKVQKEPIPEEQEMDFRPVEEGEERSDSDSSHNEEAKEPDKANWKEGEKT
DRAGAEANEEAPQTSLSSARPGTPSDHQPQEAPQVERKDEPKAEQMEKPDEESRVETSLP
VKVPSRGDETVPASQQPSTKLPPDTASPLVILPPPVPTPASASRPVETAAIEAPGMGSVS
TEPDDEEGLKHLEQQAEKMVAYLQDSALDDERLTSKLQEHRAKGVPIPLMHEAMQKWYYK
DPQGEIQGPFNNQEMAEWFQAGYFTMSLLVKRACDESFQPLGDIMKMWGRVPFSPGPAPP
PHMGELDQERLTRQQELTALYQMQHLQYQQFLIQQQYAQVLAQQQKAALSSQQQQQLAVL
LQQFQALKMRISDQNIIPSVTRSVSVPDTGSIWELQPAASQPTVWEGGSVWDLPLDTTTP
GPSLEQLQQLEKAKAAKLEQERREAEMRAKREEEERKRQEELRRQQEEILRRQQEEERKR
REEEELARRKQEEALRRQREQEIALRRQREEEERQQQEEALRRLEERRREEEERRKQEEL
LRKQEEEAAKWAREEEEAQRRLEENRLRMEEEAARLRHEEEERKRKELELQRQKELMRQR
QQQQEALRRLQQQQQQQQLAQMKLPSSSTWGQQSNTTPCQSQATLSLAEIQKLEEERERQ
LREEQRRQQRELMKALQQQQQQQQQQKLSGWGNVSKPAGTTKSLLEIQQEEARQMQQQQX
QQQQRKQQHQQTNRARHSTHSNLHTSSGNSVWGSINTGPPXQWASDLVSSIWSNADTKNS
NMGFWDDAVQRGGTXKFNKXNKNNASLSKSVGVSNRQNKKVEEEEKLLKLFQGVNKAQDG
FTQWCEQMLHALNTANNLDVPTFVSFLKEVESPYEVHDYIRAYLGDTSEAKEFAKQFLER
RAKQKANQQRQQQQQQQQQQQQQQQQQDSVWGMNHSTLHSVFQTNQATTNQSSFEAVQSG
KRRRKTEEWFEQDPSLLGFSVNASSERLNMGEIETLDDY
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagaaacccagacactaaactttgggcctgaatggcttcgtgctctgtccagt
ggtgggagtatcacttcccctcctctttctccggccctgccaaagtataaattagcagat
tatcgttacggcagagaagaaatgttagcacttttccttaaagactacaagatacccttt
gaccttctggagaaagaattcctgcctatcctacaggaggatcccctgccaccattggct
ctagtaccctttacagaagaagaacagagaaacttttccatgtctgtaaatagtgctgct
gtcctgcgattgacaggacgaggaggaggaggaggaacagtggtgggggctcctagaggt
cgaagttcttcaagagggcgaggcagaggtagaggtgaatgtggtttctaccaaagaagc
tttgatgaagtagagggtgtgtttgggcgaggaggtggcagggaaatgcatagatcacag
agctgggaagaaaggggtgacaggcgctttgaaaaaccaggaagaaaagatgtagggaga
ccaaattttgaggaaagtggaccaacatctatggggagaaagcatgaatttatacggtca
gaaagtgaaaactggcgaatctttagagaggaacaaaatggagaagatgaagatggaggt
tggcggttagctggatcaagaagggatggagagaggtggcggcctcacagccctgatggc
cctcgttctacaggctggagggaacacatggaacgtcgccggaggtttgagtttgatttt
cgagatcgagatgatgagcggggttaccgaagagtgcgctctggcagtgggagcgtagat
gacgacagggatagcttgccggaatggtgtttagaggacgctgaagaagaaatgggcaca
tttgactcctctggagcattcctctctctaaaaaaagtgcagaaagaacctattcctgaa
gagcaggaaatggacttcaggcctgtggaggagggagaagagcgctctgactctgacagc
agccataatgaagaggccaaagaacctgataaggcaaattggaaagagggagaaaaaaca
gacagagcaggagctgaagctaatgaggaagcacctcaaacatcattatcatcggctaga
ccaggtaccccttcagatcatcagcctcaagaagcaccacaggtggagaggaaagatgaa
cccaaagctgaacaaatggaaaaacctgacgaagagagtagggtagaaactagcctccca
gttaaggtgcccagcagaggggatgaaacagtgcctgcctctcagcaaccctccacaaag
cttcctccagatacagcctctcctctcgtcattcttccacctcctgttcccactcctgct
tctgcctcacggccagttgagacagcagccattgaggctcctggtatgggcagtgtttcc
acagagccagatgatgaagagggcctcaaacacctggaacagcaagccgagaagatggtg
gcttatctccaagacagtgcactagatgatgaaagattgacatcaaaactgcaggagcac
agagctaagggagtgccgattccactgatgcacgaagcaatgcaaaagtggtattacaaa
gaccctcagggggaaatccaaggtccctttaacaatcaggagatggccgaatggtttcag
gcgggctattttactatgtctttgcttgtgaagagagcgtgtgatgaaagcttccagcct
cttggtgatatcatgaaaatgtggggaagggttcctttctctccaggcccagctcctcct
cctcatatgggagaattggaccaggaacgcctgaccagacagcaggaactcactgcctta
taccaaatgcagcacctccagtaccagcagttcttaatacagcaacagtatgcacaggtt
ttggctcaacagcagaaagcagctttatcatctcaacagcaacagcagttggctgttctt
ctccagcagttccaagctctgaagatgagaatatctgatcagaacatcattccctcagta
actaggtctgtgtcagtgccagatactggctctatctgggagcttcagccagcagcctca
cagcccacagtttgggaaggtggtagtgtatgggatcttcccttggacaccacgacacca
ggcccttccctggaacagcttcagcaactagagaaggccaaagctgcaaagctagagcag
gagagaagagaggcagaaatgagggcaaaaagggaagaggaggagcgaaagaggcaagaa
gaactccgtaggcaacaggaagaaattcttcggaggcagcaggaggaagaaagaaaaaga
cgggaagaggaggagctggctagaaggaagcaggaggaggctctgcggcgccagcgggag
caagagattgcactaaggcggcaacgagaagaggaggaaaggcagcagcaggaagaagca
cttagaaggctggaggagaggaggagagaagaagaagaaagaaggaagcaggaagaactg
ctacgcaagcaggaagaggaggctgccaaatgggcccgggaagaggaggaagcacagcgc
cgcctggaggagaaccgcctgcgcatggaagaggaagcagccaggcttaggcacgaggaa
gaggaacgaaaacgaaaggagctggagctgcagcgtcagaaggagctgatgcgccagagg
cagcagcaacaagaagcccttcgaaggctgcagcaacagcagcagcagcagcagcttgca
cagatgaagcttccctcttcttcaacatggggtcagcagtctaacacaacaccatgtcag
tcccaagccacactgtcattggctgaaatccagaagttggaagaagaacgagaacggcag
cttcgagaagagcaaaggcgtcagcagagggaattgatgaaggctctccagcagcagcaa
cagcagcagcagcagcagaaactctcaggttgggggaatgtcagcaaacctgcaggtacc
accaagtctcttctggagatccagcaggaagaggccaggcaaatgcagcagcagcagnca
cagcagcaacagcgcaaacagcagcaccagcaaacaaacagagcccggcacagcacacat
tccaacctgcacaccagcagtgggaattctgtatggggctccataaacacaggtcctcct
naccagtgggcgtctgatctagtcagtagtatctggagtaatgcagacactaaaaactcc
aacatgggattttgggatgatgcagtccaaagaggggggacctagaaattcaacaaataa
aataaaaacaacgccagtctcagtaaatctgtaggtgtgtctaaccggcagaataagaaa
gtagaagaagaagaaaagttgctgaagctctttcagggagtaaataaagcccaagatgga
tttacccagtggtgtgaacagatgcttcatgcccttaatacggcaaataacttggatgtt
cccacatttgtttctttcttgaaagaagttgaatctccttatgaagtccacgactatatc
agggcctatttaggagatacttctgaggccaaggagtttgccaagcagttccttgagcgc
cgtgccaaacagaaagccaaccaacagcgtcagcagcaacagcagcagcagcaacagcag
caacagcagcagcagcagcaggactctgtttggggcatgaaccatagtaccctccattcg
gtatttcagaccaatcaagcaacaaccaaccaatccagttttgaggctgtgcaaagtggc
aagagaagaagaaaaacagaagaatggttcgagcaggatcctagtttattagggttttca
gtcaatgcgtcatcagagcgactcaacatgggtgagattgagactctagatgactactga
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integrated database retrieval system
