Arvicola amphibius (Eurasian water vole): 119821243
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Entry
119821243 CDS
T08327
Symbol
Lama4
Name
(RefSeq) laminin subunit alpha-4 isoform X1
KO
K06241
laminin, alpha 4
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04151
PI3K-Akt signaling pathway
aamp04510
Focal adhesion
aamp04512
ECM-receptor interaction
aamp05143
African trypanosomiasis
aamp05145
Toxoplasmosis
aamp05146
Amoebiasis
aamp05165
Human papillomavirus infection
aamp05200
Pathways in cancer
aamp05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
119821243 (Lama4)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119821243 (Lama4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
119821243 (Lama4)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
119821243 (Lama4)
09162 Cancer: specific types
05222 Small cell lung cancer
119821243 (Lama4)
09172 Infectious disease: viral
05165 Human papillomavirus infection
119821243 (Lama4)
09174 Infectious disease: parasitic
05146 Amoebiasis
119821243 (Lama4)
05145 Toxoplasmosis
119821243 (Lama4)
05143 African trypanosomiasis
119821243 (Lama4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_I
Laminin_II
Laminin_EGF
Laminin_G_3
COG3_N
Synaptonemal_3
Motif
Other DBs
NCBI-GeneID:
119821243
NCBI-ProteinID:
XP_038196092
LinkDB
All DBs
Position
8:50504821..50651552
Genome browser
AA seq
1823 aa
AA seq
DB search
MAWSTAWCSVLPLWLLWGAACSRAASGDGNAFPFDIEGSSVVGRQDPPETSDPRVTLGRL
PPAAERCGAGFFRTWSGECSPCDCNGHSHECMDGSGFCLHCQRNTTGEHCERCLDGYIGD
SIRGAPQFCQPCPCPLPHLANFAESCYRKNGAVRCICKENYAGPNCERCAPGYYGNPLLV
GSTCKKCDCSGNSDPNLIFEDCDEITGQCRNCLRNTTGFKCERCAPGYYGDARTAKNCAV
CNCGGGPCDSVTGECLEEGLELPTGMDCPTISCDKCVWDLTDDLRLAALSIQESKSGLLS
VSSGAAAHRHVSEMNSTIHLLKTRLSERENQYTLRKIQISNAESTMRSLLSDVDELGEKE
RQASRKGKALQKESTDTIDHATQLVEQAHNMRDKIQEINSKMLYYGENQELGPEEIAQKL
VLAQRMLEEIRSRQPFLTQRELVDEEADEAQELLSQVENWQRLHNDTRSLFPVVLEQLDD
YNAKLSDIQESLNQALDRVRDAEDMNRAITSKQRDHEKQYEKVKEQMEVVSTSLSMSADS
LMVPRQTLEELDEIIKNASGIYAEIDGATNELQGKRSNLSNLSQDLVQEAMDHASNLQQE
AEELSRNLHSSDMNGLVQKALDASNVYENIANYVSEANETAELALNITDRIYDAVSGIDT
QIIYHKDESDNLLNQARELQAKADSSNDEAVADTSRRMGGALWRKGALRDRLNDAVKQLQ
AAERGDAQQRLGQSKLVIEEANRTTMAVQEVTTPMASNISNWSQNLQTFDSSAYNTAVAS
ARDAVRNLTEVVPQLLDQLRTVEQKRPASNVSASIQRIRELIAQTRSVASKIQVSMMFDG
QSAVEVHPKVSVDDLKAFTSISLYMKPPAKRPEQAGSWIADQFVLYLGSKAAQKEYMGLA
IKNDNLVYVYNLGNEDVEIPLDSKPVSSWPAYFSIVKIERVGKHGKVFLTVPSLSSTAEE
KFIKKGGLSEDDSLLDLAPEDTVFYVGGVPANFKLPDSLNLPSYSGCLELATLNNDVISL
YNFKHIYNMDPSKSVPCARDKLAFTQSRAASYFFDGSSYAVVRDITRRGKFGQVTRFDIE
VRTPADNGLVLLMVNGSTFFSLEMRNGYLHVFYDFGFSNGPVHLEDTLKKAKINDARYHE
ISIIYHNDKKMILVVDRRHVKSMDNEKKKIPFTDIYIGGAPQEVWQSRTLRAHLPLDINF
RGCMKGFQFQKKDFNLLEQTETLGVGYGCPEDSLISRRAYFNGQGFIASTQKISFFDGFE
GGFNFRTLQPNGLLFYYASGSDVFSVSLDNGTVVMEVKKTKVMSADNHYHDGLPHFVITS
VSPTRYELVVDKSQRIETLTGKKAEQIQTSEKKFYFGGSPISPQYANFTGCISNAYFTRL
DRDVEVEDFQRYSEKVHTSLYECPIESSPLLLLHKKGRNSSKPKTNKQGEKNKDEPPAWD
PVGLTFLEQKAPRDSHCHLSNSPRAIEHAYQYGGTANSRQEFEHIQGDFGEKSQFSIRLK
TRSSHGMIFYVSDQEEDNFMTLFLAHGRLVFMFNVGHKKLKIRSQEKYNDGLWHDVIFSR
EKSSGRLVIDGLRVLEESLPPSGAAWKIKGPIYLGGVAPGRAVKNIQINSVYSFSGCLGN
LQLNGASITSASQTFSVTPCFEGPMETGTYFSAEGGYVVLDESFNIGLKFEIAFEVRPRS
SSGTLVHGHSVNGEYLNVHMKSGQVIVKVNNGVRDFSTSVTPKQNLCDGRWHRITVIRDA
NVVQLDVDSEVNHVVGPLNPKPVDHREPVFVGGVPESLLTPRLAPSKPYTGCIRHFVIDG
RPVSFSKAALVSGAVSINSCPTA
NT seq
5472 nt
NT seq
+upstream
nt +downstream
nt
atggcttggagcacagcctggtgctcagtcctgcccctgtggctcctctggggtgctgcc
tgctcccgtgcggcgtccggggatggcaatgcttttccttttgacatcgaggggagctca
gtggtcggtaggcaagacccacctgagaccagcgacccccgcgtgacactgggacgcctg
ccacctgctgctgagagatgcggtgctggattctttcgcacgtggtcaggagagtgttct
ccctgtgactgtaatggccattcccacgagtgcatggatggctccggcttctgtctgcac
tgccagcggaacacaacaggggaacactgtgagagatgtctggatggctatattggagac
tccatcagaggtgcaccccagttctgccagccgtgcccctgtcccttgccccacctggcc
aactttgcagaatcctgctaccggaaaaacggagctgttcggtgtatttgcaaagaaaac
tatgctggacctaactgtgaaagatgtgctcctggttactatggaaaccccttactcgtt
ggaagcacctgtaagaagtgtgactgcagcggtaattcggatcccaacctgatctttgaa
gactgcgatgaaatcactggccagtgcaggaactgcttacgaaataccacaggcttcaag
tgtgagcgctgtgctcctggctattatggagacgccaggaccgccaagaactgtgcagtg
tgcaactgcgggggcggcccatgtgacagcgtaaccggagagtgcctggaagaaggactt
gaactccccacaggcatggactgcccaaccataagctgcgacaagtgcgtctgggacctg
actgacgacctgcgattagcagcgctctccatccaagagagcaaatccgggctgttgagc
gtgtcctctggtgcggcggctcacaggcacgtcagcgagatgaactccaccatccacctc
ctcaaaacaaggttgtcagagagagaaaaccagtacaccctaagaaagatccagatcagc
aacgctgagagcaccatgagaagccttctgtctgatgtggacgagctgggtgagaaggaa
cgtcaagcctcaaggaaggggaaggccctgcagaaggaaagcacggacaccattgaccac
gcaactcaacttgtagagcaagcccacaacatgagggacaagatccaagagatcaacagc
aagatgctctattacggagagaatcaggaacttggcccagaggaaattgcgcagaagctg
gtgttggcccagagaatgctggaggagatccgaagccggcaaccattcctcacccagcgg
gagctcgtggatgaggaagcagatgaggcccaggaattgctgagccaggttgagaactgg
cagcggctacacaatgacacccgctctttgttccccgtggtgttggagcagctggacgac
tacaatgctaagctgtcggacatccaggaatcgcttaatcaggcccttgaccgtgtcagg
gatgccgaagacatgaacagagccatcacctctaagcagcgggaccatgagaaacaatat
gagaaagtgaaggagcagatggaagtcgtgagcacctctctgagtatgtctgcagactct
ctgatggtccctcggcagactcttgaggagcttgatgagataataaagaatgcatccgga
atttatgcagaaatagatggagccacaaatgagctacaaggaaaacgctccaatctaagt
aacctcagtcaagacttagtccaagaagccatggaccatgcgtccaaccttcaacaagaa
gctgaggagctgagcagaaatttgcacagttcagacatgaacgggctggtgcagaaggct
ttggatgcgtcaaatgtctacgaaaatattgccaattatgtcagcgaagccaatgaaaca
gcagaacttgctctgaatatcaccgatcggatttatgatgctgtgagcggaattgacact
cagatcatttaccataaggatgaaagtgacaaccttcttaatcaagcgagagaactgcaa
gcaaaggccgattctagcaatgatgaagcagtggctgacaccagcaggaggatgggagga
gccctgtggaggaagggggccctcagagacaggctgaatgatgctgtcaagcaactacag
gcagcagagcgaggggatgcccagcagcgcctgggccagtccaagctggtcatcgaggaa
gctaacaggacgacgatggctgtccaagaggtcaccacgccaatggccagcaacatcagc
aactggtcacagaaccttcagacgtttgattcttctgcatacaacactgcagtggcctct
gctcgggacgcagtgagaaatctcacagaggttgtcccccagctcctggatcaactacgt
accgttgagcagaagcggcctgcaagcaatgtttctgccagcatccaaaggatccgtgag
ctcattgctcagaccaggagtgtcgccagcaagatccaagtctccatgatgtttgatggc
cagtcggccgttgaagtgcaccccaaagtcagcgtggatgacctgaaggccttcacgtcc
atcagtttgtacatgaagcctcctgccaagcggccagagcaggctgggagctggatagcg
gatcagtttgtcctctacctcggaagcaaagccgctcaaaaagagtacatgggtctcgca
atcaaaaatgataacctggtatatgtttataatttggggaacgaagacgtggaaattccc
ctggactccaagcctgtcagctcctggcctgcttactttagtattgtcaagattgagagg
gtagggaaacacggaaaggtgttcctgacagtgcccagtctcagtagcacggctgaagag
aaatttattaagaagggcgggttgtcagaagatgactccttgctggatctggcccccgag
gacactgtgttctacgtcggcggggtgcctgcgaacttcaagctccctgacagcttaaac
ctgcccagctactcaggctgcctggagctggccacgctgaacaatgatgtgatcagtctg
tacaacttcaaacacatctataatatggatccatccaagtcagtgccatgcgccagggat
aaactggccttcactcagagtcgagctgccagctacttctttgatggctccagttatgct
gtggtgagagacatcacaaggagagggaaatttggccaggtgactcgctttgacatagaa
gttaggacaccagccgacaacggccttgtgcttctgatggtcaacgggagcacgtttttc
agcttggaaatgcgcaatggctacctgcatgtgttctatgactttggattcagcaacggc
cccgtacatcttgaagacacactgaaaaaagccaagattaatgatgcaagataccatgag
atctcaataatttaccacaatgacaagaaaatgatcttggtagttgacagacgacatgtc
aagagcatggacaatgagaagaagaaaatacctttcacagacatctacattggaggcgcg
ccccaagaagtttggcaatccaggaccctaagagcacaccttcccctagatataaacttc
aggggatgcatgaagggcttccagttccaaaagaaagatttcaatttactggagcagaca
gaaaccctaggagttggttacggatgcccagaagactctctgatatctcgcagagcatat
ttcaatgggcaaggttttattgcttcgactcagaaaatatctttctttgatggctttgaa
ggaggtttcaatttccgtacattacagccaaatgggttactgttctactatgcttcaggg
tctgatgtgttttccgtctctttggacaatgggactgttgtcatggaagtaaagaagacc
aaggttatgtcggcagacaatcattaccatgatgggctgccccacttcgtcattacctcc
gtctcacccacaagatatgaactggtagtagacaaaagccaacggattgagactctgaca
ggcaaaaaagcggaacagattcaaacaagcgagaagaagttctacttcggcggctcaccc
atcagtccccaatatgctaatttcaccggatgcataagcaatgcctactttaccaggctg
gatagagatgtggaggtggaagatttccagcgttattccgaaaaggtgcacacttcactt
tatgagtgtcccattgagtcatcgccattgcttctccttcacaagaaaggaagaaattcc
tcaaagcctaaaacaaataagcagggagagaaaaataaggatgaacctcctgcatgggat
cctgttggcctgacgtttctagaacagaaggctccaagagactctcactgccacctctcc
aacagccccagagcaatagaacatgcctaccagtatggaggcacagccaacagccgccaa
gagtttgaacacatacaaggagactttggtgaaaaatctcagttttccattcgtctgaaa
acccggtcctcacatgggatgattttctatgtctcagaccaagaagaagataatttcatg
actctgttcttggctcatggtcgcttggtcttcatgtttaatgttggccacaagaaactg
aagattagaagtcaggagaagtacaatgatgggttatggcacgacgtgatatttagtcgg
gaaaagagcagcggccgactggtcattgatggactacgagtcctagaagaaagccttcct
ccaagtggagctgcttggaaaatcaagggtcccatttatctaggaggagtggctcctggc
agggctgtgaaaaacatccagattaactccgtctacagtttcagcggctgccttggcaat
ttgcagctcaacggtgcctccatcacctcagcctcgcaaaccttcagtgtgaccccctgc
tttgaagggcccatggaaacaggaacttacttctcagcagaaggaggctatgtggtccta
gatgagtctttcaatattggattaaagtttgaaatcgcctttgaagtccgtccccgaagc
agttctggaacccttgtccatggccacagtgtcaacggggaatacctgaatgtacacatg
aaaagcggacaggtcatagtgaaagtcaacaacggtgtcagggacttttctacctcagta
acacccaagcagaatctctgtgatggcagatggcacagaattacagttattcgagatgca
aacgtggttcagctagatgtggattctgaagtgaaccacgtggttggaccattgaatcca
aagccagttgatcacagggagcctgtgtttgttggaggtgttccagagtctctactgaca
ccacgtttggctcccagtaaaccctacacaggctgcatccgccactttgtgattgacggg
cgcccagtgagcttcagtaaagcagccctagtcagcggggccgtgagcatcaactcttgc
cccacagcctga
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integrated database retrieval system
