Aggregatibacter aphrophilus NJ8700: NT05HA_1213
Help
Entry
NT05HA_1213 CDS
T00929
Name
(GenBank) hypothetical protein
KO
K03702
excinuclease ABC subunit B
Organism
aap
Aggregatibacter aphrophilus NJ8700
Pathway
aap03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NT05HA_1213
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aap03400
]
NT05HA_1213
DNA repair and recombination proteins [BR:
aap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NT05HA_1213
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NT05HA_1213
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
UB2H
AAA_30
AAA_22
DUF4191
DUF87
DUF1465
Ish1
Motif
Other DBs
NCBI-ProteinID:
ACS97573
LinkDB
All DBs
Position
1222470..1224563
Genome browser
AA seq
697 aa
AA seq
DB search
MLKYTAFRKHLKNRPHFMSEKINTKPFILHSDFNPSGDQPQAIAKLAENLEDGLAHQTLL
GVTGSGKTFTIANVIAQLNRPAMLLAPNKTLAAQLYAEMKAFFPENAVEYFVSYYDYYQP
EAYVPSSDTFIEKDASINDQIEQMRLSATKSFLERRDTIVVASVSAIYGLGDPDSYLQMM
LHLQQGAIINQRQILAKLAELQYTRNDQAFQRGTFRVRGEIIDIFPAESDERAVRIELFD
DEIERLSLFDPLTGSSFGTIPRFTVYPKTHYVTPRERILDAIEKIKVELAQRREYFIKEN
KLLEEQRISQRTQFDIEMMNELGYCSGIENYSRYLSGRNEGEPPPTLFDYMPSDAILIID
ESHVTVPQIGGMYRGDRSRKETLVEYGFRLPSALDNRPLRFEEFERLAPQTIYVSATPGP
YELEKSGSEIIDQVVRPTGLLDPQIEIRPVSIQVDDLLSEARQRADKNERVLVTTLTKKM
AEDLTDYLDEHGIRVRYLHSDIDTVERVEIIRDLRLGEFDVLVGINLLREGLDIPEVSLV
AILDADKEGFLRSERSLIQTIGRAARNLNGKAILYADSITKSMEKAITETNRRREKQTKY
NEVHGIVPQALNKKVGELLDIGQGANQKVKANKQRGKMVAEPTALYALPTSPKEYQQQIK
KLEQQMYKFAQDLEFEKAAAVRDQLQQLRESFMLSGE
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgctaaaatacacagcatttagaaaacacctcaaaaatcgaccgcactttatgtcagag
aaaattaacactaagccttttattcttcattccgatttcaacccttccggagatcagcct
caggccattgcaaaactggctgaaaatttagaagacggattagcacaccaaaccttactg
ggcgtaaccggttccggaaaaaccttcaccattgccaatgtaattgctcaattaaatcgt
cctgctatgttgcttgcgccgaataaaaccctcgcggctcagctttacgcagaaatgaaa
gcttttttccctgaaaatgcggtggaatattttgtctcttactatgattattaccaaccg
gaagcctatgtaccgagcagtgacaccttcattgaaaaagatgcgtccattaacgatcaa
attgagcaaatgcgcttgtccgccacgaaatcttttttagaacgtcgagatactatcgtg
gttgcctccgtctcagctatttacggtttgggtgatcccgattcttacttacaaatgatg
ttgcatttgcaacaaggggcgataatcaatcagcgtcagattttggcgaagttggcagaa
ttgcaatatacgcgtaacgatcaggcatttcagcgcggtacgtttcgtgtgcgcggggaa
attatcgatattttcccggcagaatccgatgagcgcgcagtacgcattgaattatttgat
gatgaaattgagcgtttaagcttattcgatccgctcacaggaagcagctttggtaccatc
ccacgtttcaccgtgtatccgaaaacacactacgtcacaccgcgcgagcgcattttagat
gccattgaaaaaatcaaagtggagctggcgcaacgacgggaatatttcattaaagaaaat
aaattgctggaagaacaacgaattagccaacgtactcaatttgatattgaaatgatgaat
gagctaggctattgctcggggattgaaaactactcacgttatctgtcgggcagaaatgaa
ggggaaccgccgccgactttgtttgactatatgccgtctgacgccattctaattattgac
gaatctcacgtcaccgtgccgcaaatcggcgggatgtatcgtggagaccgctcccgtaaa
gagacgttggtggaatatggtttccgtttgccttcggcgttggataaccgtccgctacgt
tttgaggaatttgaacgcttggctccgcaaaccatctatgtttcggctacaccagggcct
tatgaattagaaaaatccggtagcgaaattatcgatcaggttgtgcgtccgacaggtttg
cttgatccgcaaattgaaattcgcccggtgtctattcaggtggatgatctactttctgaa
gctcgccaaagagcagataaaaacgagcgcgttttagtgacgacgttgaccaaaaaaatg
gcggaagatttaacggattatttggatgaacacgggattcgtgtacgttatttgcactcc
gatattgatacggtggagcgtgtggaaattatccgtgatttgcgcctaggcgaatttgat
gtgttggtcgggattaacttattacgggaaggcttggatattcccgaagtgtcactcgtg
gcgattttagatgcggataaagaaggcttcttgcgctccgaacgttctttaattcaaacc
atcggacgtgccgcgcgaaacttgaatggtaaagcgattttgtatgcagacagcattacc
aagtctatggaaaaagccattacggaaaccaatcgtcgccgcgaaaaacaaacaaaatat
aatgaagttcatggtattgttccgcaggcgttaaataaaaaagtgggcgaattgttagac
atcggtcagggcgccaatcaaaaagtgaaagccaataaacaacgcggaaaaatggtggca
gaaccgaccgcactttatgcgctaccaacatcaccgaaggaatatcaacaacaaatcaag
aaactggaacagcaaatgtataaatttgcgcaagatttggaatttgaaaaagctgccgcg
gtacgtgatcagctgcaacaattgcgggaaagttttatgctatcaggcgagtaa
DBGET
integrated database retrieval system
