Arcobacter aquimarinus: AAQM_1045
Help
Entry
AAQM_1045 CDS
T06604
Name
(GenBank) murein L,D-transpeptidase, YcbB/YkuD family
KO
K21470
L,D-transpeptidase YcbB
Organism
aaqi
Arcobacter aquimarinus
Brite
KEGG Orthology (KO) [BR:
aaqi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
aaqi01002
]
AAQM_1045
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
aaqi01011
]
AAQM_1045
Peptidases and inhibitors [BR:
aaqi01002
]
Cysteine peptidases
Family C82
AAQM_1045
Peptidoglycan biosynthesis and degradation proteins [BR:
aaqi01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
AAQM_1045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
DAHL
Motif
Other DBs
NCBI-ProteinID:
QKE25801
LinkDB
All DBs
Position
complement(1069103..1070848)
Genome browser
AA seq
581 aa
AA seq
DB search
MNRLKFIVVSIFFINSYLIANLLESKNSNINDYLLQKYKPTFTNKKNLTEYYKQNNYQTF
WTQNNEIKNISIQLLEKIKNDPVLKSNDLDKLKITQIENKLESLNNLDENFEEKLLEIDF
LLTELYDKYSSYLLEGSINWKAFQNKLKDLEKQSEIKAQWDRYKIEKDKKRLLIEASKNN
DLSISFNQLDYNFPNANKLLDSIKQLEQIAQNGDYIKLPPFKTLRIGDKSPIVKTLRERL
AQSENISINCENIIDAQNLTTNVTSLDANIQNQEIQTEENISCEEIFDEDLKNAVISFQQ
SHGLYADGIVGLQTQNFLNMSAKEKINKIKLNLERMRWLPRDFGEKYLLVNIPEYKLRVI
ENNNIKLNMAVIVGDKKYPTPIFSDKMSYIVLNPNWNIPESITKKEILPKLLKDPNYLDT
KGIEIYQGWDRDASKIETKEVIETLILQDIESVPNFRFTQGPSNENPLGKVKFMFPNKHA
VYLHDTPAKSLFANARRAYSHGCIRLSKPQELLNLIATDDKNITLQKADEFFKETSEKSV
GLNNKIPIHIIYLTAWVDENEKLQFREDIYNFDKMQKELLF
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgaatagacttaagtttattgttgtttctattttttttataaatagttacttaattgca
aatttattagagagtaaaaactcaaatataaatgactatttattacaaaagtataaacca
acttttacaaataaaaaaaatcttacagaatattataaacaaaacaactatcaaactttt
tggacacaaaacaatgaaataaaaaatatttctatccaacttttagaaaaaatcaaaaat
gaccctgttttaaaatcaaatgatttggataaattaaaaattacacaaatagaaaataaa
ctggaaagtctaaataatcttgatgaaaactttgaagaaaaacttttggaaattgacttt
ttattgacagaactttatgataaatatagctcttatttacttgaaggctctataaactgg
aaagcctttcaaaataaattaaaagatttagaaaaacaaagcgaaataaaagcacaatgg
gatagatataaaatcgaaaaagataaaaaaagacttcttatagaagcttctaaaaacaat
gatttatctatttcatttaatcaactagattacaatttcccaaatgcaaataaattattg
gattcaataaaacagctagaacaaatagcacaaaatggggattatataaaacttccacct
tttaaaactctaagaattggcgataaatctcctattgttaaaacattaagagaaagacta
gcgcaaagtgaaaatatctcaataaattgtgaaaatattatagatgcacaaaatttaaca
acaaatgtaacttcattggatgcaaatattcaaaaccaagagatacaaacagaagaaaat
atttcttgtgaagagatttttgatgaagatttgaaaaatgctgttatctcatttcaacaa
agtcatggactttatgccgatggaatagtaggtcttcaaactcaaaattttttaaatatg
agtgcaaaagaaaaaataaataaaataaaactaaatcttgaaagaatgagatggcttcct
agagattttggtgaaaaatatctattagtaaatattccagagtataaactaagagttata
gaaaacaataacataaaactaaatatggctgtaatagttggggataaaaaataccctact
ccaatcttttcagacaaaatgtcttatattgttttaaatccgaactggaatattcctgaa
agtattacaaaaaaagagattcttccaaaacttctaaaagatccaaattatttagataca
aaaggcatagaaatttatcaaggttgggatagagatgcttcaaaaattgaaacaaaagaa
gttatagaaactttaattttacaagatattgaatctgttccaaattttagatttactcaa
ggaccaagcaatgaaaatcctcttggaaaagtaaaatttatgttcccaaataaacatgct
gtttatttacatgatactcctgctaaatctttgtttgcaaatgctagaagagcttattct
catggttgtattagactttctaaacctcaagagttattgaatcttattgcaactgatgat
aaaaatataactttacaaaaagctgatgagttttttaaagaaacaagtgaaaaatcagtt
ggcttaaacaacaaaattcctattcatatcatctatcttacagcttgggtagatgaaaat
gaaaaacttcaatttagggaagatatttataactttgataaaatgcaaaaagagttatta
ttttaa
DBGET
integrated database retrieval system
