Amedibacterium intestinale JCM 30884: Aargi30884_26460
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Entry
Aargi30884_26460 CDS
T06426
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
aarg
Amedibacterium intestinale JCM 30884
Pathway
aarg03420
Nucleotide excision repair
aarg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aarg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Aargi30884_26460
03430 Mismatch repair
Aargi30884_26460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aarg03400
]
Aargi30884_26460
Enzymes [BR:
aarg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Aargi30884_26460
DNA repair and recombination proteins [BR:
aarg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Aargi30884_26460
MMR (mismatch excision repair)
Other MMR factors
Aargi30884_26460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C_2
UvrD_C
UvrD-helicase
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
BBK23743
UniProt:
A0A6N4TLX4
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All DBs
Position
2670796..2672115
Genome browser
AA seq
439 aa
AA seq
DB search
MSYEDLCKDVETISIEFVVDYSLDAKFRRVFSDSFPLILIDEYQDSYKPIVDRFINFFIA
KGVGSQFGFFGDAWQTIYQTNNACGAIEHSNLEEIKKGSNFRSAPRIVKLLNDIRPDLPQ
QSAIDNFEGEVVVVTCDDYPGVRRSDRTFKDDLPPEELKSRLYQLSECIKKNVPKEENIK
ILMITHKVLATQQGYERLLAIIDDGLRDKQDPFLLFFMNTVEPIYEALSTLNMQLLFDTL
GIRRYPITKKSEKTKWKEFELQLKKARDGKAIDVINTIVESKLVPIPSLVDGYYHLYFDA
PDTIYGLNATIREVLDLDYSQFRAAIEFLYPEAEFSTEHGVKGEEYDNVVFVISKGWNQY
QFETYAPMITGKVPIPVGKEASYERNRNLFYVCCSRPKKRLFLFVSIPLNSAFRNFLTDI
VGAENIYTFNEYMDNKSVL
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
ttgagctatgaggatctttgtaaagatgttgaaacgatttcgatagaattcgtagttgat
tattcattggatgctaaatttcgacgtgtcttttctgatagctttccactaatcttgatt
gatgaatatcaagactcgtataaaccaattgtcgaccgatttataaatttcttcatcgct
aaaggagtgggatcacaatttggcttttttggagatgcgtggcaaactatttatcaaact
aataatgcttgtggcgcgattgaacacagcaatcttgaggaaatcaaaaaaggttcaaac
tttagatctgctcccagaattgtgaaacttttaaatgacatccgtccagatttgccacaa
cagtctgcaatagataattttgagggtgaagttgttgttgttacttgtgatgattatcct
ggggttcgtaggtcggatcgtacattcaaagatgatcttccgccagaagaactaaaatcc
agactgtatcaattgtcagagtgtatcaagaaaaatgtgccgaaagaggaaaatatcaag
attttgatgataacacataaagttcttgctacccagcaaggatatgagcgcctattagct
attattgatgatggacttcgagataaacaagacccatttttactattcttcatgaatacc
gttgaaccgatatatgaagcgttaagtacattgaatatgcagcttctgtttgatacacta
ggaattagacgctatcctatcacaaaaaaatctgagaaaacaaaatggaaagagtttgaa
ttacagctcaagaaagctcgtgatgggaaagctattgatgttatcaatactattgtagag
tcaaagttagttcctattccgtcattggttgatggatactaccatctatatttcgatgcc
cctgacactatctacggattgaatgcaacaatccgtgaagttttagatttggattacagt
caatttagggctgcaattgaatttttataccctgaagcagagttttcgacagaacatggt
gttaaaggcgaagaatacgataatgttgtctttgttattagtaaaggatggaaccaatac
caatttgagacttatgcacctatgataacggggaaagttccaataccagtaggtaaagag
gcgtcatatgaacgaaatagaaatttgttttacgtatgttgttcgagaccgaagaaaaga
ctttttttatttgtttcaataccgcttaattctgcttttagaaactttcttaccgatatt
gtaggagcagaaaatatttatacatttaatgaatatatggataataaatccgttttataa
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