Amedibacterium intestinale JCM 30884: Aargi30884_29420
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Entry
Aargi30884_29420 CDS
T06426
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
aarg
Amedibacterium intestinale JCM 30884
Brite
KEGG Orthology (KO) [BR:
aarg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aarg03009
]
Aargi30884_29420 (rimO)
Enzymes [BR:
aarg01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
Aargi30884_29420 (rimO)
Ribosome biogenesis [BR:
aarg03009
]
Prokaryotic type
ribosomal protein modification factors
Aargi30884_29420 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
BBK24039
UniProt:
A0A6N4TMR4
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All DBs
Position
2974236..2975537
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AA seq
433 aa
AA seq
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MKIGFISLGCSKNLVDSEKMMGMLKSGNHELVHNADEAEAIIINTCGFINSAKEEAIQTI
FKMAEYKKHNCKRLIVVGCLAQRYKEELEKEIPEIDAVISIKEYPHLHEILAQLLDGKDL
VSYNKCERLVSSKPWTAYLKIAEGCSNRCTYCAIPLIRGGNVSFPIEKLVEDAKELANKG
VKELVLIAQDTTKYGVDLYGKRSLLDLLKKVHEIEGFHWIRILYMYPDEIDDELIEGMAQ
LPKVVPYFDIPMQHANNRMLELMNRRGHKEDVLELCKKIRSTFAYPTLRTTFIVGFPTES
DEDFADLMQFVEDVHWDRMGAFTYSPEEDTPAYYMSGAVDEDVKQKRLETLMARQEEISL
ENQRKMIGEVVEVLVEDQEGLTGKYRGRGKSSAPDEVDGIVIFTSDRFIEFGSFVKVRIT
DALPHDLIGVEEC
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaataggttttatttctttggggtgcagtaaaaatttagtagacagtgaaaaaatg
atgggaatgctgaaaagtggcaatcatgaacttgttcataatgcagatgaagcagaagcc
attattatcaatacatgcggatttatcaattccgcaaaagaagaagccattcagactatt
tttaaaatggcagaatataaaaaacataactgtaaacgtctaattgttgttggatgtctt
gcacagcgttataaagaagaactggaaaaggaaattccagagattgatgcagtaatcagt
atcaaagaatacccgcatcttcatgaaatcttggcacagctgttagatggtaaagatttg
gttagctataataaatgtgaacgtctggtatccagtaaaccttggactgcatatttaaag
attgcggaaggatgctccaatcgctgtacatattgtgcaattcctttgattcgtggtgga
aatgtatcattccctattgaaaagctggtagaagatgcaaaagagctggcaaataaagga
gtaaaagaattggttttgattgcacaggatacaacaaaatatggtgtagacttgtatgga
aaacgcagtttattagatttgttgaaaaaagtgcatgaaattgaaggtttccattggatt
cgtattctgtatatgtatccagatgaaattgatgatgaattaattgaaggaatggcacag
cttcctaaagttgttccttattttgatattcctatgcagcatgcaaataatcgtatgctg
gaattgatgaatcgcagaggacataaagaggatgtattagaactttgtaaaaagattcgc
tctacctttgcttatccaacattgcgtactacctttattgtaggattccctactgaaagt
gatgaagattttgcagatctgatgcagtttgtagaagatgtgcactgggatcgtatgggg
gcatttacatattctcctgaagaagatacaccagcatattatatgtcaggtgcagttgat
gaagatgtaaaacagaagcgtctagaaactttaatggcacgtcaggaagaaatttcatta
gaaaatcagcgtaagatgattggtgaagttgtagaagttctggtagaagatcaggaagga
ttaactggaaaatatcgaggacgtggaaaaagcagtgcaccagatgaagttgatggtatt
gtcatttttacaagtgatcgttttattgaatttggcagctttgtaaaggtacgtattaca
gatgcacttccacatgatttgattggagtcgaagagtgttaa
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