Paracidovorax citrulli: Aave_4416
Help
Entry
Aave_4416 CDS
T00451
Name
(GenBank) RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG
KO
K02405
RNA polymerase sigma factor FliA
Organism
aav
Paracidovorax citrulli
Pathway
aav02020
Two-component system
aav02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
aav00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Aave_4416
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Aave_4416
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aav03021
]
Aave_4416
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
aav02035
]
Aave_4416
Transcription machinery [BR:
aav03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Aave_4416
Bacterial motility proteins [BR:
aav02035
]
Flagellar system
Flagellar assembly proteins
Stator
Aave_4416
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
UPF0122
GerE
Motif
Other DBs
NCBI-ProteinID:
ABM34956
UniProt:
A1TVG8
LinkDB
All DBs
Position
4911213..4911929
Genome browser
AA seq
238 aa
AA seq
DB search
MYTAKGQLNRDALIRQHAPLVRRIAHHMIAKLPPNVELDDLIQVGMIGLNEALSRYEVTQ
GVQFETFASQRIRGAMLDELREGDWMSRSSRKSQKEIEHAVTRLEQKLGRSPHESEIATE
LELSLAEYQSLLSKVRGTQLVYLEDMTRGDDDDDGFLDRHVADSAADPMAMLRDQRLRAS
LVAAIKALPEREQQIMGMYYEHDMNLKEIAAVLGVTESRICQLHSQSIARLRAKMRSH
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgtacaccgccaaaggacagctcaaccgcgatgcattgatccgccagcacgcgccgctg
gtccgccggatcgcgcaccacatgatcgcgaagcttccgcccaacgtggagctggacgat
ctgatccaggtcggcatgatcgggctcaacgaggcgctgtcgcgctacgaggtgacgcag
ggcgtgcagttcgagactttcgcctcccagcgcatccgcggcgccatgctcgacgagctg
cgcgagggcgactggatgtcgcgcagttcgcgcaagagccagaaggagatcgagcacgcc
gtgacccggctggagcagaagctcggccgcagcccgcacgaatccgagatcgccacggag
ctcgaactcagcctggcggaataccagtccctgctgagcaaggtgcgcggtacccagctg
gtttacctcgaagacatgacgcgcggcgacgacgacgatgacggtttcctcgaccgccac
gtggccgacagcgcggccgatcccatggccatgctgcgcgaccagcgcctgcgcgcctcc
ctggtggcggcgatcaaggcgctgcccgaacgggagcagcagatcatgggcatgtactac
gagcacgacatgaacctgaaggagatcgccgcggtgctgggcgtgaccgaatcgcgcatc
tgccagctgcacagccagtcgatcgcccggctgcgcgcgaagatgcgcagccattga
DBGET
integrated database retrieval system
