Trichophyton benhamiae: ARB_04948
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Entry
ARB_04948 CDS
T01611
Name
(RefSeq) U1 snRNP complex component Yhc1, putative
KO
K15542
polyadenylation factor subunit 2
Organism
abe
Trichophyton benhamiae
Pathway
abe03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
abe00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
ARB_04948
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abe03019
]
ARB_04948
Messenger RNA biogenesis [BR:
abe03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
ARB_04948
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
MIOS_WD40
PAN2_N
Motif
Other DBs
NCBI-GeneID:
9522141
NCBI-ProteinID:
XP_003016657
UniProt:
D4AKV3
LinkDB
All DBs
AA seq
493 aa
AA seq
DB search
MYGSSSLSRITAAANGEIQAHYDQFQAGVTSAAWSHSHDWLISGGQKGDVKYWRPNFNNV
ETVDDAHQEAVRDLTWCPNDSKFLSASDDTTLKIFDFTARTCEMVLTGHGWDVKSCDWHP
TKGLLVSGSKDHQVKFWDPRTGRCLTTLHTHKNTVTTTKFSPVNTNLLGTSSRDQTGRVF
DLRMMRDICILRGHDKPISSLAWHPLHSNMISTGSEDGSLYHYLLDEPNLPAGQMPTVAP
YGTTDPTNAPAQVIFPAHKIQYAHGSTIWSLDWHPLGHILASGSKDNFTRFWSRARPGEI
NYLKDRFHIGEEAAEAQGTWNRGFGRKQMREEEEQEAQAEDESRMDQRQAAESQIPGIQN
TATEGQGLPGLLPGIGALQPPPPPPPNASGAPPALPQMDPGRLAAMLSQGGLPPPPPPPG
QGQQPPFPHGTQPPPPPFFSNPNMPGSIPPNIAHMFPNPQFPPPGMPPQNFGQQGYPPSG
LPGLYAGANEKPK
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgtatggtagttccagtctctcgcgtataacagccgctgctaacggtgaaatacaggca
cactatgaccagttccaggctggtgtgacatcggctgcctggtcacatagccacgactgg
cttatatcaggcggacaaaagggtgatgtcaagtattggaggccgaactttaacaatgtc
gagaccgtcgacgatgcgcaccaagaagccgtcagggatctgacatggtgtcctaacgat
tcaaagtttctttcagcctcggacgataccacactgaaaatatttgatttcactgcgcgg
acgtgcgagatggtcctgactggacatggatgggatgttaagtcctgcgattggcatcca
acaaagggtctgctggtttcaggctccaaggaccaccaagtcaagttctgggatcctcgt
acaggtcggtgcttgaccaccctacatacccataagaacaccgtcactaccacgaaattt
tccccggtcaacactaatttactgggaacatcctctcgcgaccagaccggccgcgtgttc
gacctgcgtatgatgcgggacatctgtatacttagaggccatgacaaaccaatttcgtct
ctggcctggcatccattgcacagtaacatgatctctaccggcagtgaagatgggtccttg
tatcactatctacttgacgagcctaaccttcctgccgggcagatgcctactgttgctcca
tacggcactacagatcccaccaacgctcctgctcaggtgatattcccggcacacaagatc
cagtatgcccacgggtcgactatttggtcccttgactggcacccactaggccacatcctc
gcttccggatccaaagacaacttcacccgtttctggtcccgtgccagaccgggggagatc
aattacctcaaggacagattccacatcggagaagaggctgctgaagcacagggaacatgg
aaccgtggattcggacggaaacaaatgcgtgaggaagaagaacaggaagcacaggcagaa
gacgaaagtcgcatggaccaaagacaagctgccgaatcacaaatccccggaattcaaaac
actgctactgaaggtcaaggcctaccgggtctccttcctggtattggggcattacagcct
ccacctccaccaccgcccaatgcatccggggcacccccagctcttccacagatggatcct
gggcgattagctgccatgctatcccaaggcggccttccccctccacctccgccgccaggc
cagggtcaacaacctccatttccccatggcacacaacctcccccaccacctttcttctct
aacccgaacatgccgggcagcataccgccgaatatagctcatatgttccccaacccacag
tttccgcctcctggaatgccgccccagaatttcgggcagcagggttatcctccgtcaggg
ctaccggggctgtatgctggagcgaacgaaaagccaaagtga
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integrated database retrieval system
