Aeromonas bestiarum: IU367_20085
Help
Entry
IU367_20085 CDS
T08822
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
abes
Aeromonas bestiarum
Pathway
abes03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
abes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
IU367_20085 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abes03400
]
IU367_20085 (recD)
Enzymes [BR:
abes01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
IU367_20085 (recD)
DNA repair and recombination proteins [BR:
abes03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
IU367_20085 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
RecD_N
AAA_11
Viral_helicase1
Helicase_RecD
SH3_13
UvrD-helicase
AAA_22
AAA_16
nSTAND3
CbiA
AAA_28
NTPase_1
SLFN-g3_helicase
SRP54
UvrD_C
T2SSE
Motif
Other DBs
NCBI-ProteinID:
WDL82326
LinkDB
All DBs
Position
complement(4353069..4355138)
Genome browser
AA seq
689 aa
AA seq
DB search
MSDTMISTATSVIMIERLKALALTGRIRQLDLQFAKLVADLGGSPELVLGAALACFELGR
GHVCLPLEMLAAGSLRPFGLDPQQSRDLLLDLADPARWPALFAASPLVGTEQDDGVAPRW
PLRLWHGRLYLTRYHDHEQGVARHLRTLSERAEWPEIAPALSRLFARDYGLVFAALLKAR
LTPDFSAHHFIEKYLDLVFPSEVDWPAIEALLASAQAASDLGKLDMLVPEALCCNGQKLA
AATAAARPFAVISGGPGTGKTTTVAKLLAILVETGLQAGKAPAIRLVAPTGKAAARLTES
IGSALQALDLPPEWVEAIPTEAGTLHRLLGVIPGRSQFRHHAGNPLHLDLLVVDEASMVD
LPMMARLLDALPSHARLILLGDKDQLASVEAGAVLGDICSFIEQGISPAQADWLSRQTGY
RLQGTPAGAPVRDSLCLLSKSWRFDQHSGIGQLARACNSGDATAVEAVWGMGFGDISLHP
WAGEAYEALIAQGVAGYGSYLKAARAGEDPAAVFKAFNGFQILCALRDGPFGVLGLNERL
ELALARAGLIARDGDWYVGRPVMVVRNDHGVGLYNGDMGLCLPDDTGRLKVWFEQPDGTL
RALLPSRLPPHETVYAMTIHKSQGSEFTHTVLVLPDSPSPLLTRELVYTGITRAKARLDL
YGDRALLAQAVRKKTERYSGLAERLGLKN
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacaccatgatcagcacagcgaccagcgtcatcatgatcgaacggttgaaagca
ctggcgttgacggggcgcatccgccagctggatctgcaatttgccaagctggtggccgat
cttggcggcagccccgagctggtgctgggggctgcgctcgcctgcttcgagctggggcgc
ggccatgtctgtctgccgctggagatgctggcagcaggatccttgcgcccgttcgggctg
gatccccaacagagccgggatctgctgctggatctggcggatccggcccgctggcccgcc
ctgtttgcggccagcccgctcgttggcaccgagcaagatgacggggtcgccccgcgctgg
ccgctgcggttgtggcacgggcgcctctacctcacccgctaccacgatcacgagcagggc
gtggcccgccatctgcgcaccctgagcgagcgcgccgaatggccggagattgccccggcc
ctgtcgcggctgtttgcccgcgactacgggcttgtgttcgcggcgctgctgaaagcccgc
cttacccccgacttctcggcccaccactttatcgagaagtacctggatctggtgttcccg
agcgaagtggattggcccgccatagaggcgctgctggccagcgcgcaggcggcgagcgat
cttggcaagctggatatgctggtgcccgaggcgctctgctgcaacggccagaagctggcg
gcggccaccgcggcggcacgccccttcgcggtcatctccggcggccctggcaccggcaag
accacgactgtggccaagctcctggccattctggtggaaaccggcctgcaagcaggcaag
gcaccggcgatccggctggtggcgcccaccggcaaggcggcggcgcgcctcaccgagagt
atcggctctgccctgcaggcgctggacttgccccccgagtgggtcgaagccatccccacc
gaagcgggcaccctgcaccggctgctcggggtgatcccggggcgcagccagttccgccac
cacgcaggcaaccctctgcacctcgacttgctggtggtggatgaggcctccatggtcgat
ttgcccatgatggcgcgcctgctcgatgcgttgcccagccacgcccgcctgatcctgctc
ggcgacaaggatcagctcgcctcggtggaggcgggggccgtgctcggcgatatctgcagc
tttatcgaacagggtatcagcccggcgcaggcggattggctctcccgccagaccggctac
cgtttgcagggcacgcccgctggggcacccgtgcgcgacagcctctgtttgctttccaag
agctggcgcttcgatcagcattcgggcataggccagctggcgcgcgcctgcaacagcggc
gatgccactgcggtggaggcagtctggggcatgggctttggcgatatcagcctgcacccc
tgggccggggaggcctacgaggccctgattgcccagggagtggccggttacggcagctat
ctgaaggcggcccgcgcgggggaagatcccgccgccgtattcaaggcgttcaacggcttc
cagatcctctgcgccctgcgcgacggtcccttcggggtgctggggcttaacgagcgactg
gaactggccctggcacgggccgggctgattgcccgcgatggggactggtatgtggggcgc
cccgtgatggtggtgcgcaacgaccacggggtcggcctctacaacggtgacatggggctc
tgcctgcccgatgacaccggccgattgaaggtatggttcgagcagccggacggtaccctg
cgcgccctgctacccagccgcctgccgccccacgagactgtctacgccatgaccatccac
aaatcccagggctcggagtttacccatacggtgctggtgctgcccgacagccccagcccc
ctgctgacccgcgaactggtctataccggcatcacccgcgccaaggcccgcctcgatctc
tacggcgatcgcgccctgctggcacaagcggtcaggaaaaagaccgaacgttattccgga
ttggcggagaggctgggtctgaaaaactga
DBGET
integrated database retrieval system
