Akkermansia biwaensis: Abiwalacus_06290
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Entry
Abiwalacus_06290 CDS
T08790
Name
(GenBank) DNA polymerase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
abiw
Akkermansia biwaensis
Pathway
abiw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
abiw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Abiwalacus_06290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abiw03400
]
Abiwalacus_06290
Enzymes [BR:
abiw01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Abiwalacus_06290
DNA repair and recombination proteins [BR:
abiw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Abiwalacus_06290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
BDL43055
LinkDB
All DBs
Position
795940..796911
Genome browser
AA seq
323 aa
AA seq
DB search
MSAGLPQHLTLDYLRSLLSRGVEHAPVTEEARKVLRQWVIEARRVARGDTPASAPPVSGT
EHPHPAGIPENSQPASVDEISFGNELRAILNGVHPGGTEEEPAVPRHVAFDLEGETEEEK
LASLRELVLHWPPLKNLNSLRDTPVFSSGNPRADIMMVTDAPGLYEEKLGRPLAGPSGEK
LDAMLQAMGITRADIYLTHLVKFRPSLPRQLTNNRPPTDREIEISRPILREEIMLVRPKV
VVALGAIAARGILQSGETPLSALRGTFHTAFDTPVRVTYNPSYLLRTEDISEKRKVWEDM
LCVMERAGLPISDKQRSYFLPRK
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccggcctgccccaacacctcacccttgactatctgcgctctttgttatccagg
ggcgtggagcacgcgcccgtgacggaagaggcccggaaagtcctgaggcagtgggtgatt
gaggcgcgccgggtggcccggggagacactcccgcctccgctccgcccgtttccggaacg
gaacatccccatcctgccggcattccggagaactcccaacccgcttccgtggatgaaatc
tccttcggcaacgaactcagagccatcctcaacggcgtgcatcccggagggacggaagag
gaacccgccgttccgcgccacgtggcctttgacctggagggggaaacggaagaagaaaaa
cttgcctccctccgcgaactggtgctgcactggcccccgctcaaaaacctgaattccctg
cgggacacccccgtcttttcctccggcaatccccgggcggacatcatgatggtgacggac
gctcccggactgtatgaagaaaagctgggcaggcccctggcgggaccgtccggggaaaag
ctggacgccatgctccaggccatgggcattacccgagcggacatttacctgacccacctg
gtcaagttccgtccctccctgccccggcagctcaccaacaaccgcccccccaccgaccgg
gagatagaaatttcccgtcccatcctccgggaagaaatcatgctggtgcgtccgaaagtg
gttgtcgccctgggcgccatcgccgccaggggaatcctccaatccggggaaacgccgctt
tccgcgctgcggggaaccttccacacggctttcgacacgcccgtgcgcgtcacctacaac
cccagctacctgctgcggacggaagatatttcggaaaagcgaaaggtctgggaagacatg
ctgtgcgtcatggaacgggcggggctccccatctcggacaaacagcgttcctatttccta
cccagaaagtaa
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