Agaricus bisporus var. burnettii JB137-S8: AGABI1DRAFT78171
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Entry
AGABI1DRAFT78171 CDS
T03136
Symbol
AGABI1DRAFT_78171
Name
(RefSeq) hypothetical protein
KO
K08737
DNA mismatch repair protein MSH6
Organism
abp
Agaricus bisporus var. burnettii JB137-S8
Pathway
abp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
abp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
AGABI1DRAFT78171 (AGABI1DRAFT_78171)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abp03400
]
AGABI1DRAFT78171 (AGABI1DRAFT_78171)
DNA repair and recombination proteins [BR:
abp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
AGABI1DRAFT78171 (AGABI1DRAFT_78171)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
AAA_29
Motif
Other DBs
NCBI-GeneID:
18831479
NCBI-ProteinID:
XP_007332639
JGI:
Agabi_varbur_1_78171
UniProt:
K5X1G0
LinkDB
All DBs
Position
Unknown
AA seq
1262 aa
AA seq
DB search
MASKDKGKDALKQRSLTSFFSKAPVVSSNSHSKPNATRKDKFTVNAKSNIDGDASSNPNE
PCTPETKALNKRILVSSVAASSASSRAGSTPPTSDPIDVDMVSERGEDTESPAYTRSVQV
RKKRKIVADSDEESRPSHTKRIVSNSSPIPAKGLSKRQRLALATSEDDDDDEGDYVTNTF
SQRLTRFKKSPVKKGKKSRASDDDDFIVPDEEGDDSEAETKSIRSSSGRSSMSSRRSVSS
DGDLTEDQDDKAKQTKSKKKPGKPSKGLEGASGGGSFSFLTAAEQREQGKKNEKKAAEDP
YAFLQDVKDKDGKRPGEPGYDPRTLHIPSSVWKEFTPFEKQFWEIKQNHYDTVLFFQKGK
FFELYEDDARIGHQEFDLKLTSRVKMSMVGVPEMSLDFWTAKFLGKGYKVGRVDQSETAL
GAEMRNKSKGKASEDKAKDKIVRRRELNKVYTNGTLVDPELLIDDNAGHCVAITEEPSED
GKDLQNKFGICVLDCSTSQFNLSAFEDDVCRTKLETLMRQIRPKELLFKKGSLSVSTTRM
LKMILPTNVLWTSLRTVEGFDYDQTMEQLKTLFPPGDEDMEDDGDDALPASVPESIREMA
SYPKAIESLGCMIWYLRQLNIDKEIISMKNFNVYDPMKRGQGLTLEGQSLAHLEILINNE
GTEDGSLLKLLNRCITSFGKRLFRIWLCMPLRNVVDINARLDAVEDIMNHPTFEADFVEI
AKGLPDLERIVSRIHANNCKIKDFLKVLASFRKLSRGLNKLADESEDFKSKTILGLLRGA
PDLIPHVKHIEEMFQRPDPSGKASDELLPQKGKDEEYDAIVAEINGVEGKLEEALSELED
QVGFKLTYWHSATGHKDIYLVEIAVAKKAPSTWTKHSGTKAKNRYVVPSLQSKIRQLKEA
RENRTTAIKSFKSRLFAEFDQDRSVWLRSIRVFAELDCLFSLAKSSTVIGSPSCRPEFVE
NAHGSTFVDFEELRHPILCLNTNLKNFIANDVKLGGDVGKVALLTGPNMAGKSTLMRMTA
IGVIMAQLGMFVPASKARLSPVDSIITRMGAYDNMFAHASTFKVELDECSKILREATPRS
LVILDELGRGTSTFDGMAIAGAVLHQLATHTLPLTFFATHYGSLTDDFAQHPNIRNMHMS
TLVDDEKKELVFLYKLIDGVAESSFGTHVANLAGVPFEVVERADIVSKQFAKQFKEKLEL
KQKQNASALVPLNIQADWVYLVKLASGEVKVNDEGRGREVLDRLRGVFKNFLEHKKKVKL
SD
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaaaagacaagggcaaagatgcactgaaacaaagaagcttgacatctttcttc
tcaaaggcaccagtcgtctcttctaattctcactcaaaaccaaatgctacgcgtaaagat
aaatttaccgtcaatgctaaatccaatatcgacggagacgcgtccagtaatcctaatgaa
ccttgtactccagaaaccaaagcacttaacaaacgaattcttgtatcttctgtagctgcc
agttctgcttcttcccgtgctggtagtacacctccgacaagtgacccgattgatgtggat
atggtttctgaaagaggcgaagatacagagagtccagcatatactaggagtgtgcaggtc
cgtaaaaaacgaaagatcgtagcagattcggacgaagagtctagaccgtcccatacaaag
cgcattgtatcgaattcttcaccgatacccgcaaaaggccttagcaaacggcagcgcctt
gctctagcgacaagtgaagatgacgacgatgacgagggagactatgtgacaaatacgttt
tctcaaaggttgactcgtttcaagaagtctccggtcaagaagggcaaaaagtcgcgtgct
tcggatgatgacgatttcatcgttcctgatgaggaaggtgacgactccgaagcagaaacg
aagtctataagatcttcatctggccgttcttctatgtcatcccggcgttctgtcagctct
gatggtgatttaaccgaagatcaagatgacaaagcgaaacaaactaagtctaaaaagaaa
cccggaaaaccctccaaaggattggaaggagcttcggggggaggaagttttagtttcctt
acagcggctgaacaacgagaacaaggcaagaagaatgaaaagaaagctgcggaagatccc
tacgcgtttcttcaagacgtcaaagacaaagacggaaaacggcctggagaacctggttat
gacccgaggacactgcacattccatcatcagtttggaaagagtttacaccatttgaaaaa
cagttttgggagattaaacagaatcattacgacactgtcctgttcttccagaaaggaaag
ttctttgagctctatgaagacgatgcacgtattggtcatcaagaattcgatttgaaacta
acttctcgtgtcaaaatgtcaatggtcggcgtgccagaaatgtccttggatttctggact
gcaaagtttttaggaaaaggctacaaggttggtcgagtggatcaatctgaaacagcgctt
ggtgcggaaatgcggaataagtccaagggcaaggctagcgaagataaggccaaagataag
atcgtcagacgcagggagctgaacaaagtatataccaatggtactctcgtcgatccggag
ctattgatcgacgataatgctggccattgtgttgctatcaccgaagagccctcggaagat
ggaaaagacctgcagaacaagtttggcatttgtgttttggattgttcaacctcgcaattc
aatctaagtgcattcgaggatgacgtctgtcgcactaaactcgagactctcatgcgccaa
atccgaccgaaggagcttttgttcaaaaagggatcgctttctgtttcgactactcgcatg
ctcaagatgattctacccactaatgttctgtggaccagtttacggacggttgaaggcttt
gattatgaccaaacgatggagcaactcaaaacactctttccaccaggagatgaagacatg
gaagacgatggcgatgatgctcttccagcatctgtgccggagtctatccgtgaaatggcg
tcatacccgaaggcaattgaatcactgggctgcatgatttggtatttacgtcaattgaac
attgataaggaaatcattagcatgaagaatttcaacgtgtatgaccctatgaagcgtggt
caggggctaacactcgaaggccagagtttggcccatcttgagatactgatcaacaatgag
ggaacagaagatggatccttgctcaaactcttaaatcggtgtataacgtcctttggcaaa
cgactattccgcatttggttgtgcatgcctttgcgtaacgttgttgatatcaacgcgagg
cttgatgccgtggaagacatcatgaaccatcctacatttgaggctgactttgttgagatt
gccaagggtttgcccgatcttgagagaattgtttcaaggatacacgcgaataattgcaag
atcaaggattttttgaaagtacttgcttcattcaggaagttgagtcgtggattgaacaaa
ttggcagatgaatcggaggatttcaagtctaaaacgatcctgggattattacgtggtgct
cctgacctcataccccatgtgaagcacattgaggaaatgttccagagaccagatccgagc
ggcaaagcttcagatgagttgttgccgcagaagggtaaagatgaagagtatgatgcaatc
gtggccgagatcaacggggttgaaggaaagttggaggaagcccttagtgagcttgaggat
caagtggggttcaagcttacctactggcatagtgcgaccggtcacaaggatatctacttg
gttgagattgcagtggcaaagaaggctccttcgacttggactaagcatagtggtaccaag
gccaaaaatcgctatgttgttccctcgcttcagtcaaaaattcgccaactgaaagaagcc
cgtgaaaaccgtacaaccgccatcaaaagcttcaaatctcgactttttgctgaatttgat
caggaccgcagtgtatggcttcgctcaatccgcgtttttgctgaactcgactgcttattc
tctttggccaaatcctcaacggttattgggtcaccatcgtgtagacctgagtttgtggaa
aatgctcatggatccacgtttgttgattttgaagaactgaggcatcccattttgtgtttg
aacactaatttgaagaattttatcgcgaatgatgtgaaacttggtggagatgtcgggaag
gtggctttgttgacggggccgaatatggctgggaaatccacgctcatgcgaatgactgca
attggtgtaatcatggcgcaacttggaatgttcgttcccgcttccaaagcaaggttgagc
ccagtggactctattataacccgtatgggtgcctacgacaacatgttcgctcatgctagt
acattcaaggttgaactcgacgaatgttctaaaattttgcgggaggcgacgcctagatca
cttgtgatacttgatgagctaggcaggggaacatctaccttcgacggcatggcgattgcg
ggcgcggtattgcaccaacttgccacccatacattaccgttaacgttctttgcgactcac
tatggttcacttaccgatgattttgctcaacaccctaacatccgaaatatgcacatgtcg
acattagttgatgatgagaaaaaagagctcgtattcttgtataaactcatcgacggcgtt
gcagaatcctcgtttggaacgcacgtggccaatcttgctggcgttcctttcgaagtcgtc
gaaagagccgatattgtctctaaacaatttgctaaacaattcaaggaaaaattggagttg
aagcaaaagcaaaatgcgtcggcgctggtaccattgaatatacaagctgattgggtctat
cttgtcaagcttgctagtggagaggtcaaagtgaatgatgagggtagggggagagaggta
ctggataggctcaggggcgttttcaaaaactttttggagcataagaaaaaggtgaagttg
agcgattag
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integrated database retrieval system
