Azospirillum brasilense Az39: ABAZ39_03595
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Entry
ABAZ39_03595 CDS
T03288
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
abq
Azospirillum brasilense Az39
Pathway
abq03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
abq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ABAZ39_03595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
abq03021
]
ABAZ39_03595
03400 DNA repair and recombination proteins [BR:
abq03400
]
ABAZ39_03595
Enzymes [BR:
abq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ABAZ39_03595
Transcription machinery [BR:
abq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ABAZ39_03595
DNA repair and recombination proteins [BR:
abq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ABAZ39_03595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Biotin_lipoyl_2
Motif
Other DBs
NCBI-ProteinID:
AIB11114
UniProt:
A0A060DK79
LinkDB
All DBs
Position
759910..764079
Genome browser
AA seq
1389 aa
AA seq
DB search
MNELMNIFGQVQGPQSFDQIRIQIASPERIRSWSFGEIKKPETINYRTFKPERDGLFCAR
IFGPIKDYECLCGKYKRMKYRGIICEKCGVEVTLSKVRRERMGHIELASPVAHIWFLKSL
PSRIGLLLDMTLKDLERILYFENYVVIEPGLTPLKLHQLLSEEEFVSAQDEYGEDAFTAS
IGAEALRIMLSALDMEEEKKTCREELRDTSSEAKRKKLVKRLKLIDAFLSSQSRPEWMIL
EVIPVIPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELKAPDIIVRNEKRML
QEAVDALFDNGRRGRVITGANKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGP
ELKLHQCGLPKKMALELFKPFIYAKLELYGLASTIKAAKRMVEKERPEVWDILEEVIREH
PVMLNRAPTLHRLGIQAFEPTLIEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSLEAQLE
ARVLMMSTNNILSPANGKPIIVPSQDIVLGLYYITMDRPGEKGEGMTFANVGEIEQALDA
KVVTLHAKVKARYKGVDENGDEKISIVETTPGRMLLSEILPRNPAVPFSLINRLLTKKDV
GNVIDAVYRHCGQKETVIFADRLMKLGFGHACRAGISFGKDDMVIPEAKKKLVNDSKERV
KEFEQQYLDGLITQGEKYNKVVDVWSECTEKVATEMMKVISDTKPGKPVNSVYMMAHSGA
RGSAAQIRQLAGMRGLMAKPSGEIIETPIISNFKEGLTVLEYFNSTHGARKGLADTALKT
ANSGYLTRRLVDVAQDAIIVETDCGTDKGITVKAVIDGGEVISPLGDRILGRTVVGDLID
PLNGELIVPNAGLIDEPTVDRIERSGIDSVMIRSVLTCETKDGVCAKCYGRDLARGTLVN
VGEAVGVIAAQSIGEPGTQLTMRTFHIGGAAQRGAEQSQVEAAFDATVRIHNRNVVINSS
NIPVVMGRSTEVILLDEQGRERARHRVPYGAKLLADEGVKVERGQKLAEWDPYTLPIITE
REGTAHYVDLVEGISMREVMDEATGISSKVVVDWRQQPRGADLKPRITLRDERGEIITLA
NGLEARYFMSVDAILSVENGAHVRAGDVLARIPRESSKTRDITGGLPRVAELFEARRPKD
FAIISDLDGRVEFGKDYKTKRRIVVRNDETGDEREYLIPKGKHISVQEGDYVQRGDLLMD
GNPVPHDILSVMGVEALANYLINEIQDVYRLQGVKINDKHIEVIVRQMLQKVEITDAGET
TFLVGEQVDRQEFDEENEKTVAEGLKPAAGHPVLQGITKASLQTRSFISAASFQETTRVL
TEAAVSGKTDNLEGLKENVIVGRLIPAGTGSVVNRLKQIAAERDRALAEGEGQDGEAPAL
PHPGESTAA
NT seq
4170 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagttgatgaacattttcggccaagtccagggtccccagagcttcgatcagatc
cgcatccagatcgcgagccccgagcgcatccggtcctggtcgttcggcgagatcaagaag
ccggaaaccatcaactatcgcactttcaagcctgagcgcgacggcctgttctgcgcccgc
atcttcggcccgatcaaggactacgagtgcttgtgcggcaagtacaagcgcatgaagtac
cgtggcatcatctgcgagaagtgcggcgtcgaggtgacgctgtcgaaggtccggcgcgag
cgcatgggccacatcgagctggcctcgccggtcgcccacatctggttcctgaagtccctg
ccgagccgcatcggtctgctgctcgacatgacgctgaaggatctggagcgcatcctctat
ttcgaaaactacgtcgtcatcgagccgggcctgactccgctgaagctgcaccagcttctg
agcgaggaggagttcgtctccgcccaggacgagtatggcgaggacgccttcaccgcctcg
atcggtgccgaagcgctgcgcatcatgctgtcggcgctcgacatggaggaggagaagaag
acctgccgcgaggagctgcgggacacctcgtccgaggccaagcgcaagaagctcgtgaag
cggctgaagctgatcgatgccttcctgtcgtcgcagtcgcgtccggaatggatgatcctg
gaagtcattccggtgatcccgccggagctgcgcccgctcgtcccgctggacggcggccgc
ttcgcgacgtccgacctgaacgacctgtaccgccgcgtcatcaaccgcaacaaccgtctg
aagcggctgatcgagctgaaggcgccggacatcatcgtccgcaacgagaagcgcatgctg
caggaggccgtcgacgcgctgttcgacaacggccgccgtggccgcgtcatcaccggcgcc
aacaagcgtccgctgaagtcgctgtccgacatgctgaagggcaagcagggccgcttccgt
cagaacctcctcggcaagcgcgtcgactactcgggccgttcggtcatcgtggtcggtccg
gagctgaagctgcaccagtgcggcctgccgaagaagatggcgctggagctgttcaagccc
ttcatctacgcgaagctggagctgtacggcctcgcctcgaccatcaaggccgccaagagg
atggtcgagaaggagcgtcccgaggtgtgggacatcctcgaggaggtcatccgcgagcat
ccggtgatgctgaaccgcgcgccgacgcttcaccgcctgggcatccaggccttcgagccg
acgctgatcgaaggcaaggcgatccagctccacccgctggtctgcaccgccttcaacgcg
gacttcgacggcgaccagatggccgtgcacgtcccgctgagcctcgaggcccagctggaa
gcgcgcgtcctgatgatgtcgaccaacaacatcctgtcgcccgccaacggcaagccgatc
atcgtgccgtcgcaggacatcgtgctgggtctctactacatcacgatggaccggccgggc
gagaagggcgagggcatgaccttcgccaacgtcggcgagatcgagcaggcgctggacgcc
aaggtcgtgacgctgcacgccaaggtgaaggcccgctacaagggcgtggacgagaacggc
gacgagaagatctccatcgtggagacgactccgggccgcatgctgctgtccgagatcctg
ccgcgcaacccggcggtgcccttctcgctgatcaaccgcctgctgaccaagaaggacgtc
ggcaacgtcatcgacgccgtctaccgccattgcggtcagaaggagacggtgatcttcgcc
gaccgcctgatgaagctcggcttcggccacgcctgccgcgccggcatctccttcggcaag
gatgacatggtcatccccgaggcgaagaagaagctggtcaacgacagcaaggagcgggtg
aaggagttcgagcagcagtatctcgacggcctgatcacccagggcgagaagtacaacaag
gtcgtcgacgtctggtcggaatgcaccgagaaggtggcgacggagatgatgaaggtcatc
tccgacaccaagccgggcaagccggtcaactcggtctacatgatggcccactccggcgcg
cgtggctcggccgcccagatccgccagctggcgggcatgcgcggcctgatggccaagccg
tcgggcgagatcatcgagacgccgatcatctcgaacttcaaggaaggcctgaccgtgctg
gagtacttcaactccacccacggcgcccgcaagggtctggccgacaccgccttgaagacg
gcgaactccggttacctgacccgtcgtctcgtcgacgtggcccaggacgccatcatcgtc
gagacggattgcggcaccgacaagggcatcaccgtcaaggcggtgatcgacggcggcgag
gtcatctccccgctgggtgaccgcatcctcggccggacggtggtcggcgacctgatcgac
ccgctgaacggcgagctgatcgtgccgaacgccggcctgatcgacgagcccacggtggac
cgcatcgagcgctcgggcatcgacagcgtcatgatccgttcggtcctgacctgcgagacc
aaggacggcgtctgcgccaagtgctacggccgcgatctggcccgcggcacgctggtcaac
gtcggcgaggccgtcggcgtcatcgccgcccagtcgatcggcgagccgggcacgcagctc
accatgcgcacgttccacatcggtggcgccgcgcagcgcggtgctgagcagagtcaggtg
gaggcggcgttcgatgccacggtgcggatccacaaccgcaacgtcgtcatcaactcctcc
aacatcccggtggtcatgggccgcagcaccgaggtgatcctgctcgacgagcagggccgc
gagcgggcgcgtcaccgcgttccgtacggtgcgaagctgctggccgacgagggcgtgaag
gtcgagcgcggccagaagctggccgagtgggacccctacaccctgccgatcatcaccgag
cgcgagggtaccgcccactacgtcgacctcgtggaaggcatctccatgcgcgaggtgatg
gacgaggcgaccggcatctcgtccaaggttgtggtggactggcgtcagcagccgcgcggt
gcggatctgaagccgcgcatcacgctgcgcgacgagcggggcgagatcatcacgctggcc
aacggtctggaggcccgctacttcatgtcggtggacgccattctatcggtcgaaaacggc
gcccatgtccgggccggcgacgtgctggcgcgtatcccgcgcgagtcgtccaagacccgc
gacatcacgggcggtctgccgcgcgtggccgagctgttcgaggcgcgccgtccgaaggac
ttcgcgatcatctcggacctcgacggccgcgtggagttcggcaaggactacaagaccaag
cgccgcatcgtcgtccgcaacgacgagacgggggacgagcgcgagtatctgatcccgaag
ggcaagcacatctccgtgcaggagggtgactatgtccagcgcggcgacttgctgatggac
ggcaacccggtgccgcacgacatcctgtcggtgatgggcgtggaggctctggccaactac
ctcatcaacgagatccaggacgtctatcgactgcagggcgtgaagatcaacgacaagcac
atcgaggtgatcgttcgccagatgctgcagaaggtcgagatcaccgacgccggcgagacc
accttcctggtgggcgagcaggtcgatcgtcaggagttcgacgaggagaacgagaagacc
gtcgccgaggggctgaagccggccgccggccatccggtcctgcagggcatcaccaaggcg
tcgctgcagacccggtccttcatctccgccgcgtcgttccaggaaaccacccgcgtcctc
accgaggcggcggtgtcgggcaagaccgacaacctggaaggcctgaaagagaacgtcatc
gtcggccgcctgatcccggcgggcaccggctccgtcgtcaaccgcctgaagcagatcgcc
gccgagcgggatcgcgccctggcggagggcgagggccaggacggcgaggctccggccctg
ccgcacccgggcgagagcaccgcggcctga
DBGET
integrated database retrieval system
