Aromatoleum bremense: pbN1_40850
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Entry
pbN1_40850 CDS
T07149
Symbol
ku
Name
(GenBank) Non-homologous end joining protein
KO
K10979
DNA end-binding protein Ku
Organism
abre
Aromatoleum bremense
Pathway
abre03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
abre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
pbN1_40850 (ku)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abre03400
]
pbN1_40850 (ku)
DNA repair and recombination proteins [BR:
abre03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
pbN1_40850 (ku)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
QTQ34068
LinkDB
All DBs
Position
complement(4243960..4245009)
Genome browser
AA seq
349 aa
AA seq
DB search
MPRVVWKGAIAFGLVHVPVALYPASTANRLDLDLLDRRDFAPVGYQRINKRTGEPVSPSD
IVKGYQYEDGQYVVVTDEDFREANVEATQTVEIVGFVSQDDIPPYYFDTPYYLEPGRRGE
KGYALLRETMRATRRVALALVVIRSRQHLAAVIPVGAVLLMNTLRFADEIRSMDELKLPD
ESLKKLGVTARELEMAERLVEDMVEDWAPEQYRDTHRDDLMARIEAKIESGRTHVLAETR
AKEPAEAGAEVVDLMALLKRSLEGRSPRRAAGKARSENEEEGAGADEDSAPRPSRTAARK
SAGSGASATKPVPPGRSTGAGKPTSRNPAGEPGKDGGGRPAAETRRRRA
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgcccagggtggtctggaaaggcgccatcgccttcggtctggttcatgtcccggtcgct
ctttaccccgcgagcacggcaaaccggctcgacctcgacctgctcgaccgccgcgatttc
gccccggtcggctaccagcgcatcaacaagcgtaccggtgagccggtgtcgccgtcggac
atcgtcaagggctaccagtacgaggacggccagtacgtcgtcgtcaccgacgaggacttc
cgcgaggcgaacgtcgaagcgacgcagacagtcgagatcgtcggctttgtgtcgcaggac
gacatcccgccttactacttcgacacgccgtactacctcgagcccgggcgccgtggcgag
aaagggtatgcgctgttgcgcgagaccatgcgtgcgacccgccgagtcgcgcttgcgctg
gtcgtgatccgcagccgccagcatctggcggcagtgatcccggtcggcgcggtgctgctg
atgaacacgctgcgcttcgccgacgagatccgctcgatggacgaactgaaactgccggac
gagagcctgaagaagctcggcgtgaccgcacgggagctcgagatggccgagcgcctagtt
gaagacatggtcgaggactgggcgcccgaacagtaccgcgacacccaccgcgatgacctg
atggcacgcatcgaggccaagatcgaatccgggcgcacgcacgtcctcgcggaaacgcgg
gcgaaggagccggccgaggccggggcggaggtcgtcgacctgatggcgctgctcaagcgc
agcctcgaaggacgctcccccaggcgcgccgctggcaaggcgcgcagcgaaaatgaagag
gagggggcgggcgccgacgaggattctgcgccgcgaccgtcgcgcactgctgcgcgcaag
tccgccgggagcggggcgtcggcgacgaaaccggtgcctcccggacggagcactggcgcc
gggaagcctacgtcccgcaatcccgccggcgagccgggcaaggacggtggaggtcggccg
gcggctgaaacccggcgtcggcgcgcatga
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