Alkalicella caledoniensis: HYG86_16040
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Entry
HYG86_16040 CDS
T07204
Name
(GenBank) sigma-54-dependent transcriptional regulator
Organism
acae
Alkalicella caledoniensis
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PAS
Sigma54_activ_2
PAS_4
PAS_9
HTH_8
PAS_8
AAA_5
AAA_2
AAA
PAS_7
PAS_10
Mg_chelatase
AAA_19
bpMoxR
AAA_3
AAA_16
DUF5797
sCache_3_3
HTH_19
Motif
Other DBs
NCBI-ProteinID:
QNO16175
UniProt:
A0A7G9WBW3
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Position
3282506..3284227
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AA seq
573 aa
AA seq
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MGKRVLGLHEIQVILDSIYDAIMAVDLQGKIILMNKGAEKIVGVPYEQCLGKDVVEMVPS
TRLPRVLAEKKPELNKKQMVGDISIVTNRMPVFNQRGQLVGAVAVFRDITEVKQLAEKVT
NLREVQVTLESIINSTEDAISVVDQDGKGIMINPAYKKLTGFTENDIIGKPASVDISEGE
SVHEKVLQTKQPVKSVKMKVGPLNKEVLVDAAPLIVDDKLKGSVAVIHDISELKRLNEEL
DKAKRIIRKLEAKYTFEDIIAEEPNMKMAIEQAKNAAVTPATVLLRGESGTGKELFAHAI
HNSSNRKYNQFIRVNCAAISENLLESELFGYVDGAFTGAKRGGKKGLFAQASGGTIFLDE
IGEISLNLQAKLLRVLQEREIVPVGDTKSQNVDARVIAATNVNLEEAIKEGKFREDLYFR
ISVVPIFIPPLRKRHKEIALLATHLLRKFNQEYGRSIKGISEEALRILQGYYWRGNVREL
ENVIGRAIINMDFSENVIGPNHLPHLGEEKQNINTPKLEISNNVPLASVLDSVEKEYIEK
VLEANKYNKTKTAKDLDISIRSLYNKIEKYNLQ
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaaagagtcttagggcttcacgaaatacaggttattttagacagtatctatgat
gcaataatggctgttgacctccaagggaaaataattctgatgaataagggagccgaaaag
atagtaggagtcccttatgagcaatgcttaggtaaagacgttgtggaaatggtcccaagt
acaaggcttccaagggttttagcagaaaaaaaacctgaactcaataaaaagcaaatggta
ggggatatatccatagtaacaaatagaatgcctgtttttaatcaaaggggacaactagta
ggagctgtggcagtttttagggatataacagaggttaaacagctagcagaaaaagttacc
aacctaagggaagttcaagtaaccctagaatcaataataaactcaactgaggatgctatt
tccgttgtggatcaagatggaaagggtataatgattaacccagcatataagaaactaact
gggtttactgagaacgatataattggtaaaccagccagtgtggatataagtgaaggggaa
agtgtacatgaaaaagttttacagaccaagcaaccagttaagagtgtaaaaatgaaagta
gggcccttaaacaaagaagtccttgttgatgctgctcctctgatagtagacgacaaatta
aagggtagtgtagcagtaattcatgatatatctgaactaaaaagactaaacgaagaacta
gataaagcaaagaggataattcgcaaattagaagctaagtatacctttgaagatattata
gctgaagagccaaatatgaaaatggcaatcgaacaggcaaaaaatgctgctgtaacacct
gcaactgtgttactaaggggcgaaagtggtacaggaaaagagctttttgcccatgctatc
cataattcatcaaatagaaaatataaccagtttataagggttaactgtgcagctatttct
gagaatcttttggaaagcgaactttttggctatgtggatggagcttttacaggggctaaa
aggggtggcaaaaaaggtctttttgcccaagcaagtggggggactatttttctagatgaa
ataggtgagattagtcttaatctgcaagcaaagctacttagagtacttcaagaaagagag
attgttcctgtgggagatactaagtcccaaaatgtcgatgcaagggttatagctgctaca
aatgtgaacttagaggaagcaataaaggagggaaagttcagggaagacttatactttaga
ataagtgtagtacctatatttataccccctctacgcaagaggcacaaagagattgcactt
ttagcaacacatttattaaggaagtttaatcaagaatatggtaggagcatcaaagggatt
tcagaagaagcccttaggatactacaaggctattactggcgagggaatgttagggagctt
gaaaacgtaataggtagagcaataataaacatggatttttctgaaaatgtgatagggcca
aatcatttaccccacctaggtgaagagaagcaaaatatcaacactccaaaattagaaata
tcaaataacgtacctctagctagtgttttagactccgtggaaaaagaatacattgagaaa
gttttagaagcaaacaaatacaataaaactaaaactgccaaagacttggatatatctatt
cgaagtttgtacaataaaatagaaaaatataatctgcaataa
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