Arthrobacter caoxuetaonis: NF551_01930
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Entry
NF551_01930 CDS
T08978
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
acao
Arthrobacter caoxuetaonis
Pathway
acao03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acao00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NF551_01930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acao03019
]
NF551_01930
03400 DNA repair and recombination proteins [BR:
acao03400
]
NF551_01930
Enzymes [BR:
acao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NF551_01930
Messenger RNA biogenesis [BR:
acao03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NF551_01930
DNA repair and recombination proteins [BR:
acao03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NF551_01930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Pribosyltran
MDMPI_C
Motif
Other DBs
NCBI-ProteinID:
USQ57647
LinkDB
All DBs
Position
410418..412598
Genome browser
AA seq
726 aa
AA seq
DB search
MEPVSVPPVQPVQLSASSEAFGPEDAQALRAEATALLRALVGREDAQFHEGQYEAIEALV
RGGRRALVVQRTGWGKSAVYFVASLLLRSRGAGPTLIVSPLLALMRDQVAAAARAGVRAA
AINSANQLEWQDISARLEADDVDVLLVSPERLNNPGFRENHLPELVRRSGLLVIDEAHCI
SDWGHDFRPDYRRIRHLIERLPASVPVLATTATANSRVVKDVEEQLAAGGEDVFTIRGAL
ARESLRLGVLRLPSPRSRLAWLLTHIGELPGSGIIYALTVSAAEDTARLLQKAGHRVLAY
TGRTDPADREQAEAALKNNEVKALVATSALGMGFDKPDLGFVVHLGAPSSPVAYYQQVGR
AGRGTPNADVLLLPGSEDRDIWEYFATSSMPAEGPANAVLRELADGSVLSTGALETLVNL
KRSPLELLLKVLAVDGAVERVTGGWRGTGQPWTYDRERYERIAAARVKEQQAMLDYENTS
GCRMEFLSRQLDDPAAAPCGRCDNCAGRWYPDDIASEATDSASQELSRVGVDIDPRGMYP
TGMDRLGVPVKGKIKPDAAVSTGRALARLTDLGWGGRLREIFAPGSPDAPVDPALLQGCV
QVLAQWGWDQRPVAIVSVPSRSRPQQVGSLAQGLSELGRIPYLGALQLPHGGPSGGPGGN
SAFRLASVWEQFAVPEGGADWFAANPGPVLLVDDFSDSRWTLTEAGRVLRLAGAESVLPF
VLALKA
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggaacccgtatccgtgccgcccgtccagcccgtccagctgtcagcatcctccgaagcc
ttcggcccggaggatgcccaggctctccgtgccgaagcaactgccctgttgcgggcgctg
gtgggccgggaggatgcgcagttccacgaaggccagtacgaagccatagaggcccttgtc
cgcggagggcggagggccctagtggtccagcggaccggctggggaaagtccgccgtgtat
ttcgtggcaagcctgctgctccgctcccggggcgccggtcccacgctgattgtctcgccg
ctgctggcgctgatgcgggaccaggttgccgctgcggcacgcgccggcgtgcgggccgcg
gccatcaattcggcgaaccagctcgaatggcaggacatctccgcccggctggaagctgac
gacgtcgacgtcctcctggtctcaccggagcggctgaacaatcccggcttccgggagaac
catcttccggaacttgtccgccgctcgggactgctcgtgatcgacgaggcacactgtatc
tccgactgggggcacgacttccggcccgactaccgccggatccgccacctgatcgaacgg
cttccggcaagcgttcccgtcctggccaccacggccaccgccaactcccgcgtggtgaag
gacgtcgaagagcagctggccgccggcggggaagacgtcttcaccatccgcggagccctg
gcccgtgaatccctgcggctgggggtgctgcggctgcccagcccgcgcagccggctcgcc
tggctgctcacccacatcggtgagctgcccgggagcgggatcatctatgccctgacggtt
tctgccgcggaggacaccgcacgcctgctgcaaaaggccgggcaccgcgtcctggcctac
accggccggaccgatcctgcggaccgcgagcaggccgaggctgccctgaagaacaacgag
gtcaaggccctggtggcgacaagcgcgctcggcatgggcttcgacaagccggacctcgga
ttcgtggtccacctgggggcgccgtcgtcgcccgtggcgtactaccagcaggtgggtcgt
gcaggccgcgggaccccgaacgccgacgtgctgctgctgcccggaagcgaggaccgcgac
atctgggaatacttcgccacgtcgtccatgcccgcggagggcccggctaacgccgtgctg
cgggaactggccgacgggtccgtgctttcgaccggggcgctggaaaccctggtgaacctg
aaacgatcgccgctggaactgctgctgaaagtccttgccgtggacggtgccgtggaacgc
gttaccggcgggtggcgcgggaccgggcagccctggacgtacgaccgtgaacgctacgag
cggatcgctgccgcccgcgtcaaggaacagcaggccatgctggactacgagaacaccagc
ggctgccggatggagttcctgtcccgccagctggacgatcccgcggcggctccctgcggg
cgctgcgacaactgtgccggccgctggtacccggacgacatcgcctccgaggcgacggac
agcgccagccaggaactcagccgcgtgggcgtggacatcgacccgcggggcatgtacccc
accggaatggaccggctcggcgtgccggtcaagggcaagatcaagcccgacgccgccgtc
tccaccgggcgggcgctggcccgcctgacggacctgggctggggcggacggctgcgggaa
atctttgctcctggttcgcccgacgctccggttgacccggcgctgctgcagggctgcgtg
caggttctggcccagtggggctgggaccagcgtccggtagccatcgtgtcagtccccagc
aggtcccgtccgcagcaggtcggttccctggcccaggggctctcggaactgggacggatc
ccttacctcggtgccctgcagctgccccacggcggaccttccggcggtcccggaggaaac
agtgccttccggttggcatcggtctgggagcagttcgctgtgcccgagggcggtgcggac
tggtttgccgccaacccgggtccggtgctgctggtcgatgatttctccgacagccgctgg
acgctcactgaggccgggcgcgtgctgcggctggccggggcggaatccgtgctgcctttt
gtgctggcgctgaaggcatag
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