Pseudarthrobacter chlorophenolicus: Achl_2238
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Entry
Achl_2238 CDS
T00834
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
ach
Pseudarthrobacter chlorophenolicus
Pathway
ach03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ach00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Achl_2238
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ach03400
]
Achl_2238
Enzymes [BR:
ach01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Achl_2238
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Achl_2238
DNA repair and recombination proteins [BR:
ach03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Achl_2238
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
DnaJ_CXXCXGXG
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
ACL40203
UniProt:
B8HAB1
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All DBs
Position
complement(2513076..2514047)
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AA seq
323 aa
AA seq
DB search
MPELPEVEVVRRGLVSWVRGRTIESVDVLDPRSIRRHALGVEDFIGNLQGATVSDVVRRG
KFLWLPLVDGSAHQQAAGNGQAPPSRVALMAHLGMSGQLLMQDAGVPDEKHLKVRLHLSP
SAGMPGQLRFVDQRIFGGLFVTALVPTDDGGPGGLAESPLPLIAGEASHIARDPLDPAFS
FDRFYQRLRARKTGLKRALLDQGLVSGIGNIYADEALWRARLHYARPTDKLRRADAFRLI
DSARAVMLDALDAGGTSFDSLYVNVNGASGYFDRSLNAYGREGEPCKRCTAAGIHATIRR
EQFMNRSSYTCPVCQPRPRNGRW
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgaactgcccgaggtggaggtggtccgccgcggcctggtgagctgggtccgcggc
aggaccatcgagtctgtcgatgtgctggacccccgctccatccgccgccacgccctcggt
gtggaggacttcatcggcaacctgcagggtgccaccgtgtctgatgtcgtccggcgcggc
aaattcctgtggctgccgttagtcgatggttccgcccaccagcaggcggcaggcaacgga
caagccccaccctcgcgggtggcgctgatggcccaccttggcatgagcgggcaactgctc
atgcaggacgcgggcgttccggacgaaaagcacctgaaagtccggctccatctcagcccc
agtgccggcatgcctggccagctgcgcttcgtggaccagcgcattttcggtgggctcttt
gtcaccgcgttggttcccaccgacgacggcggccccggcggcctcgcggagtcgcccctt
ccgctgatcgccggggaggcgtcacacattgcccgggatccgctggacccggccttctca
ttcgaccgtttctaccagcgcctgcgtgcgcggaaaaccgggttgaaacgggcgctcctg
gaccaggggctggtttcgggaatcggtaacatctacgccgatgaggccctctggcgtgca
cggttgcactacgcgcgtcccaccgacaagctgcggcgggctgacgccttccggcttatc
gacagcgcccgggcggtcatgctcgatgccctggacgccggcggaaccagcttcgattcc
ctgtacgtaaacgtcaacggggcctccggatattttgaccggtcgctcaatgcctacggg
cgcgaaggcgagccctgcaaacggtgcacggctgcgggaatccacgccaccatccgccgt
gaacagttcatgaaccggtcctcctacacgtgcccggtatgccagccgcggccccgcaac
ggacgctggtaa
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