KEGG   Achromobacter sp. 77: H4P35_05110
Entry
H4P35_05110       CDS       T08458                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
acho  Achromobacter sp. 77
Brite
KEGG Orthology (KO) [BR:acho00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:acho02044]
    H4P35_05110 (tssC)
Secretion system [BR:acho02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   H4P35_05110 (tssC)
SSDB
Motif
Pfam: VipB VipB_2
Other DBs
NCBI-ProteinID: UDG76732
LinkDB
Position
complement(1133452..1134924)
AA seq 490 aa
MKAQASVAPETKQSQGLLEQIMAQTRIEPTHEGYAVAERGVAAFIGEILKSDEREQQVNK
QLVDQMIAEIDRKISHQMDAILHHKPLQELESAWRGLKLLVDRTDFRENIKIEILHVTKD
ELLDDFEGCGDITRSGLYKHVYTAEYGQFGGEPIASIVGNYTFGPSAPDIKLLSYVASVG
AMAHAPFLAAAGAEFLNLKSFQDLPNLKEVKDIFEGPRFAKWRGLRESEDARYLGLTMPR
FLLRQPYDPLENPARSFVYRETIAGDHDNYLWGNTSYLLASRITESFAKYRWCPNIIGPQ
SGGAVDDLPVHLYESLGQLQAKIPTEVLVSDRKEFELAEEGFIPLTMRKDSDNAAFFSAN
SVQKPKRFQKTPEGQDAQTNYKLGTQLPYMFIINRLAHYIKVLQREQIGSWKERQDLERE
LNGWLKQYIADQESPSSDVRSRRPLRAAKVQVQDVAGNPGWYQVSLAVRPHFKYMGANFE
LSLVGRLDKE
NT seq 1473 nt   +upstreamnt  +downstreamnt
atgaaggctcaagccagcgttgcaccggaaacgaaacaaagccagggactgctcgagcag
atcatggcgcagacccgaatcgaacccacgcacgagggttatgccgtcgctgaacggggg
gtcgcggcattcatcggcgaaattctaaaaagcgatgaacgcgagcagcaggtaaataaa
cagctcgtcgaccagatgattgccgaaatcgatcgaaagatcagtcatcaaatggatgcg
attctgcatcacaagccgctgcaggaactcgaatccgcctggcgtggactcaaattgctg
gtggacaggacggattttcgggaaaacatcaagatcgaaatcctgcacgtcaccaaggac
gaattgctcgacgattttgaaggctgcggcgacatcacgcgcagtggtttatataagcac
gtgtacaccgccgaatatgggcagttcggcggcgagccgattgccagcattgtgggcaac
tacacgtttggcccctcggcgcccgacatcaagctgcttagctatgtcgcctcggttggc
gcaatggcccacgcgccgttcctcgccgcggccggcgccgagttcctgaacctcaagagt
ttccaggatctgcccaatctgaaagaagtgaaggacattttcgaaggtccgcgctttgcg
aaatggcgcggcctgcgcgaatccgaagacgcccgctatcttggactgaccatgccgcgc
ttcttgttgcgccagccctacgatccccttgaaaaccccgcccgcagcttcgtgtaccgc
gagacgatcgcaggcgaccatgacaactatctgtggggcaacacgtcctacctgctcgcc
agccgtatcaccgagagctttgccaagtatcgctggtgcccgaacatcatcggaccgcaa
tccggcggcgcggtcgacgacctgccggtgcacctgtacgaatccctgggacagctgcaa
gccaagattcccactgaagtgctggtgtccgaccgcaaggaattcgagttggccgaagag
ggtttcatccccctgacgatgcgcaaggacagcgacaacgccgcctttttctccgccaac
tcggtgcaaaagcccaaacgcttccagaagacgcccgaaggccaggacgcacagacaaac
tacaagctgggcacgcaactgccctacatgttcatcatcaaccgcctggcgcactacatc
aaggtccttcagcgcgagcagatcggcagctggaaggagcggcaagatctggaacgtgag
ctcaatggctggctcaagcagtacatcgcggaccaggaaagcccgtcttccgatgtgcgc
agccgccgtccgctgcgcgcggccaaagtccaggtgcaggacgttgccggcaacccgggc
tggtaccaggtttcgctggccgtgcgcccgcatttcaagtacatgggcgccaacttcgag
ttgtcgctcgtgggccgcctggacaaggaataa

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