Achromobacter sp. AONIH1: C2U31_23845
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Entry
C2U31_23845 CDS
T05288
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
achr
Achromobacter sp. AONIH1
Pathway
achr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
achr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C2U31_23845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
achr03400
]
C2U31_23845
DNA repair and recombination proteins [BR:
achr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C2U31_23845
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
C2U31_23845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
DEAD
UVR
AAA_30
Kinesin
AAA_22
DUF87
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
AUT50272
UniProt:
A0A2I8DSZ8
LinkDB
All DBs
Position
complement(5207672..5209654)
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AA seq
660 aa
AA seq
DB search
MYQPYPPAGDQPTAIDSLVQGMEDGLMYQTLLGVTGSGKTYTMANVIARLGRPALVLAPN
KTLAAQLYAEMREFFPKNAVEYFVSYYDYYQPEAYVPTRDLFIEKDSSINEHIEQMRLSA
TKSLLERRDTVIVGTVSCIYGIGNPGDYHAMVLILRSGDRISRREILARLVAMQYTRNDA
EFTRGVFRVRGETIDIFPAESAELALRLTLFDDEIESLELFDPLTGRIRQKLPRFTVYPG
SHYVTPRDTVLRAIETIKEELRERVKRYVDDGHLVEAQRLEQRTRFDLEMLQELGFCKGI
ENYSRHLSGAAPGEPPPTLIDYLPSDALMFIDESHVTIGQLSAMYRGDRSRKETLVQYGF
RLPSALDNRPLKLEEFEARMRQCVFVSATPAAYEREHTDNVVEQVVRPTGLVDPEVQVLP
ARTQVDDLLGQIKARVAVSERVLVTTLTKRMAEDLTDFLSEHGIRVRYLHSDIDTVERVE
IIRDLRLGTFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSDRSLIQTIGRAARNLN
GHAILYADRITDSMQRAMQETERRRVKQLQFNADHGITARGVSKAVRELIDGIVAPVQHD
ALEAAVPAEFLNDEKALAREIKRLEKLMMDHARNLEFEQAAAARDALTALKQRVLLDGAV
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
ctgtaccagccgtatccgccggcgggcgaccagccgacggccatcgacagcctggtccag
ggcatggaagacggcctgatgtaccagacgctgctgggtgtcaccgggtcgggcaagacc
tacaccatggccaacgtgatcgcccgtctcggccgtccggccctggtgttggcgcccaac
aagacgctggctgcgcagttgtacgccgaaatgcgcgaattcttcccgaagaacgcggtc
gagtacttcgtctcgtactatgactattaccagcccgaggcctacgtgccgacgcgcgat
ctgttcatcgagaaggactcgtccatcaacgagcacatcgagcagatgcggctgtcggcc
accaagagcctgctggagcgccgcgacactgtgatcgtgggcacggtgtcctgcatctac
ggtatcggcaatcccggcgactaccacgccatggtgctgatcctgcgctcgggcgaccgg
atttccaggcgcgagatcctggcgcggctggtcgccatgcagtacacccgcaatgacgcc
gagttcacgcgcggcgtgttccgcgtgcgtggcgagacgatcgacatctttccggccgaa
agcgccgagctggcgctgcggttgacactgttcgacgacgagatcgagagcctggagctg
ttcgacccgctgaccggccgcatccgccagaagctgccccgcttcacggtgtacccgggt
tcgcactacgtaacgccgcgcgataccgtcctgcgcgccatcgagacgatcaaggaagag
ctgcgcgagcgcgtcaaacgctatgtcgacgacggccatctggtcgaggcgcagcggctg
gagcagcgcacccgcttcgatctggaaatgctgcaggagctgggcttctgcaagggcatc
gaaaactattcgcggcatctatcgggcgccgcgccaggcgagccgccgcccacattgatc
gactatctgcccagcgatgcgctgatgttcatcgatgaaagccacgtcaccatcgggcag
ttgagcgccatgtatcgcggcgaccggtcgcgcaaggaaacgctggtccaatatggattc
cgcctgccttcggcgctggataacaggccgctgaagctggaggaatttgaagcgcgcatg
cgccagtgcgtgttcgtgtccgccacgccggctgcctatgagcgcgagcatacggacaac
gtggtggagcaggtggtgcgtcccacgggtctggtggatccggaggtgcaggtgctgcca
gcgcgcacccaggtcgacgacctgctgggccagatcaaggccagggtggcggtgtcggag
cgcgtgctggtgaccacgctcaccaagcgcatggccgaggatctgaccgacttcctgagc
gagcacggcatccgcgtgcgttatctgcattccgatatcgataccgtcgaacgcgtggaa
atcatccgcgacctgcggttgggcacgttcgacgtgctggtcgggatcaacctgctgcgc
gagggcctggacattcccgaggtttcgctcgtggcgatcctggatgccgacaaggaaggc
ttcctgcgctcggatcgcagcctgatccagaccatcgggcgcgccgcgcgcaacctcaac
gggcacgcgatcctttatgccgaccgcatcacggattcgatgcagcgggccatgcaggaa
acggagcggcggcgtgtcaagcagctgcagttcaacgcggaccacggcatcacggcgcgt
ggcgtcagcaaggcggtgcgcgagctgatcgacggcatcgtggcgccggtccagcacgat
gcgctggaagcggcggttcccgcggaattcctgaacgacgaaaaggcgctggcgcgcgag
atcaagcgcctggaaaagctgatgatggaccacgcccggaatctggagttcgaacaggct
gccgctgcccgcgatgccctgacggcattgaagcagcgcgtcctgctggacggcgcggtg
tga
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