Acidiferrobacter sp. SPIII_3: C4901_08365
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Entry
C4901_08365 CDS
T05469
Name
(GenBank) RNA pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
acii
Acidiferrobacter sp. SPIII_3
Brite
KEGG Orthology (KO) [BR:
acii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
acii03009
]
C4901_08365
Enzymes [BR:
acii01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
C4901_08365
Ribosome biogenesis [BR:
acii03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
C4901_08365
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
DUF2647
Motif
Other DBs
NCBI-ProteinID:
AWP24969
UniProt:
A0A2Z3R469
LinkDB
All DBs
Position
1683608..1684525
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AA seq
305 aa
AA seq
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MTDEFRFCLEISPAEEGLRLDRALARRLPQYSRTTLQGWLRDGRITIGARPVSAAAPVHA
GECVAFDLPPPAPADVLAEDIPLAIVFEDDTLIVIDKPAGLIVHPGAGCARGTLQNALLH
HAPDLAPLARSGIVHRLDKDTSGLLVVARTEAARLALIGQLKTREMGREYEALVIGAPPA
TGFVDAPIGRDVRHRTRMSVRRDGRPARSDFMVLERLGAYSLLRVRLHSGRTHQIRVHMA
YLGFPLVGDETYGGGRTRHLLDRQALHARRLSVRHPRTGESLVFEAPRPDDLANIVTMLR
HGSPS
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
ttgacagacgagttcaggttttgcctggagatatcgccggccgaggagggcttgaggctg
gatcgcgcgctggcgcgacggctgccgcagtactcgcgcaccacgctccagggttggctg
cgtgacgggcgtatcaccataggcgcgcggccggtgagtgcggcggcgccggtgcacgcc
ggcgaatgcgtggccttcgatctgccgccgccggcgcccgcggatgtcctggccgaggac
atcccgcttgcgatcgtgttcgaggacgacaccctgatcgtgatcgacaaacccgcgggg
ctcatcgtgcatcccggggccggctgcgcccggggtaccttgcaaaacgcgctcttgcat
cacgcgccggacttggcgccgcttgcgcgctcggggatcgtgcatcgcctcgacaaggac
acctccggcctgctcgtggtggcgcgcaccgaggccgcgcggcttgcactcatcgggcaa
ctgaagacccgcgagatgggacgcgaatacgaggcgctcgtgatcggcgcgccaccggcg
acgggattcgtggacgcgccgataggacgcgacgtgcgccaccggacgcgcatgagcgtg
cgccgcgatgggcgcccggcgcgttcggatttcatggtgctggagcgcctcggcgcctac
agcctgctgcgcgtacggcttcattccgggcgtacgcatcagatccgtgtccatatggca
tacctcggattcccgctcgtgggcgacgagacctatggcggggggcgcacgcgtcacctc
ctggaccgtcaggcgctgcacgcgcgccgcctttcggtgcgccatccgcgcaccggtgag
tcgctggtcttcgaggccccgcgtccggacgatctcgcgaatatcgtgaccatgctgcgc
cacgggagtccgtcgtga
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