Acidocella sp. MX-AZ03: GT370_14405
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Entry
GT370_14405 CDS
T08719
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
Organism
acim
Acidocella sp. MX-AZ03
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
IcmF-related_N
IcmF-related
IcmF_C
IcmF_helical
AAA_24
Motif
Other DBs
NCBI-ProteinID:
WBO58385
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Position
complement(2602091..2605606)
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AA seq
1171 aa
AA seq
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MKKILGFLASRWVLSFVAALVLAALVWFFAPFIHALAGIIVRLVIILVILLVWLGANLLL
DRRRKTRDAALAAGVADAGAATQDKAAAEELAALSEKLKKSLALLRKASGSRGYLYEQPW
YVIIGPPGAGKTTALLNAGLKFPLAAELGQGAVAGVGGTRLCDWWFTEQAVLIDTAGRYT
TQDSNAATDKAGWEGFLDLLKRTRQRQALNGVVVAISLADIAAAPREERLAHARAIRTRI
KELTARLDLKLPVYALLTKADLLAGFTEFFDDLDQEKRAQVWGTTFPAQNTNAVAQFDAE
FKLLVQRLDERLIDLLQRERSPERRALIAGFPTQVASLEAPLNEFLAEAFGGSALDPAPY
LRGVYFTSGTQEGTPIDRLTGALTRAFGIDQRRAPSLRAASGRSYFLSRLLQEVIFGEAM
LAGQNPAQRRRRLLLQAAGYGAVGIVFLGLLGGFLLSRAHNQAAIAASDQAVANYQQAAK
SLQLDPVQDSNLQTVLPLLDAARAMPFGAGDTADHGAMGLGLNQAPKLSAGANTLYANAL
DNILLPRLILQLEAEMRGGFDKPEFLYQATRVYLMLGGQGPMDKNLVEAWMKLDWQRLYP
GIANQDAREDLMQHLVAMLNAPLPQVPLDGALVEAARATFSRVSVAERVYSRIRDSQAAA
AVPAWVPATAMGAAGVPLFTRASGKPLTEGVPGFYTLKGFQLVLLPALTHATKDVADESW
VLGPGQQVDPSSPDMQNLEQNVIKLYEADYEAQWNAMLGDLNLKPATNIGQAVQTLYILG
SPQSPMQRLLASITTQLQLSKGVEPPKPAATSKIPGAAALNADATALQGLMGAATASGGP
ALGSEVDNYYAPLINYVGGGAGSPMSLTLNLINGLQQQLAALAAAAPGTVPAAPAAGGDP
ASLLQGEAATDPQPVSRWLQALVVNANGLRGGSAAKAAAAAFNGAAGPGQLCQQAVAGRY
PFVPASSSDIPLGDFAHLFAPNGLLDSFFTQQVQPFVDMSGRTWRVQAVNGVTPPISQGA
LAEFQRAETIKQLFFAAGATPSVQFSLSPTALDAGAAQAVLQLGAVNVSYAHGPQVPTMI
SWPGADGMQTARLIITPVGGGNPVELDASGPWALFHLFSQGTLAQAGSSDQYTLTFSAGG
HSVSYSIGANSVLNPFAPGMLADFRCPSLQG
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaattctcggctttctggcgtcgcgctgggttttgagcttcgtcgccgccttg
gtgctggcggctctggtgtggttcttcgcgcccttcattcacgctttggccggcatcatc
gtccggctggtcatcattctggtcattctgttggtctggctcggcgccaatctgctgctg
gaccggcggcgcaagacacgtgacgcggctttggccgccggtgtcgcggatgccggggcg
gccacgcaggacaaggcggcggcggaagagctggcggcgctgagcgagaagctgaaaaaa
tccctcgccttgctgcgcaaggccagcggctcgcgcggctatctctatgagcaaccctgg
tacgtgatcatcggcccgccaggggccggcaagaccacagcacttctgaatgccgggctg
aaattcccgctggcggcggagttggggcagggggcggtggccggtgtcggcggcacccgg
ctttgcgactggtggttcaccgagcaggcggtgctgatcgacaccgccgggcgctacacc
acccaggattccaacgctgccaccgacaaagccggttgggagggcttcctcgacctgctc
aagcgcacccgccagcgccaggcgctgaacggcgtggtggtggcgatctcgctggccgac
atcgccgccgcgccgcgtgaggagcgcctggcccatgcccgcgccatccgcacccgcatc
aaggagctcaccgcccggctggatctgaagctaccggtctatgcgctgctgaccaaggcg
gatctgctcgccggcttcaccgagtttttcgacgatctcgaccaggaaaagcgcgcccag
gtctggggcaccaccttcccggcacaaaacaccaatgcggtggcgcagttcgatgccgag
ttcaagctgctggtgcagcgcctggatgaacggctgatcgatctgctgcagcgcgagcgc
agcccggagcgccgcgccctcatcgccggcttccccacccaggtggcgagcctggaagct
ccgctgaacgagttcctggccgaggcctttggcggctcggctttggaccccgccccttat
ctgcgcggtgtctatttcacctccggcacccaggagggcacgccgatcgaccggctgacc
ggcgcgctcacccgcgccttcggcatcgatcagcgccgcgccccctcgctgcgcgccgcc
tccggccgcagctatttcctctcccgcctgctgcaggaggtgattttcggcgaggcgatg
ctggccgggcagaatccggctcagcgccgccggcgcctcctgctgcaagcggcgggctat
ggcgctgttggcatcgtgtttctggggctgctcggcgggttcctgctcagccgcgcccat
aaccaggcggcgattgccgccagcgaccaggcggtggccaattaccagcaggcggccaag
agcctgcagctggatccggttcaggattcgaacctgcaaaccgtgctgcccttgctggat
gccgcccgcgccatgcccttcggcgctggcgacacggcagatcatggcgcgatggggctg
gggctgaatcaggcgcccaagctcagcgccggtgccaacacgctctacgccaacgcgctg
gataatatcctgctgccacggctgatcctgcagctggaagcggagatgcgcggcggcttc
gacaagccggaattcctctaccaggccacacgcgtctatctgatgctgggcgggcagggg
ccgatggacaaaaacctcgtcgaagcctggatgaagctggattggcagcgcctttatcca
ggcatcgccaaccaggatgcgcgcgaggatctgatgcagcatctggtggcgatgctgaac
gccccgctgccgcaggtgccgctggatggcgcgctggtggaagccgcccgcgccaccttc
agccgggtctcggtggcggagcgcgtctattcgcgcatccgcgattcccaggccgccgcc
gccgtgcccgcctgggtgccggcgacggcgatgggggcggccggcgtgccgctcttcacc
cgcgcctccggcaagccgctgaccgagggcgtgcccggtttctacacgctgaaaggcttc
cagctggtgctgctgccggccctcacccacgccaccaaggatgtcgcggatgagagctgg
gtgctcgggcccggccagcaggtcgatccgtccagtccggacatgcagaatctggagcag
aacgtcatcaagctctatgaggccgattacgaggcgcagtggaacgcgatgctgggcgat
ctgaacctgaagccggccaccaatatcggccaggcggtgcagacgctctacatcctcggc
tccccgcaatcgccgatgcagcgtctgctggccagcatcaccacgcagttgcagctctcc
aagggcgtcgaaccgccgaagccggccgcgacctcgaagatccccggtgcggcggcgttg
aatgcggatgccacggcgctgcaagggctgatgggcgcggccacggccagcggcggtccc
gcccttgggtccgaggtggataattactacgcgccgctgatcaattatgtcggcggcggc
gccggctcgccgatgagcctcacgctcaacctcatcaacgggctgcaacagcaattggcg
gcattggccgccgccgcgcccggcaccgtcccggcggccccggcggcgggcggcgacccg
gccagcctgctgcaaggtgaggcggcgaccgacccgcagcccgtatcgcgctggctgcag
gcgctggtggtcaatgccaatggtctgcgcggcggcagtgcggccaaggcggcggcggcg
gcgttcaacggggccgccgggccgggccagctctgccagcaggcggtggccgggcgctac
ccgttcgtgcctgcctcctcctccgacatcccgttgggtgatttcgcgcatctcttcgcc
cccaacgggctgctggacagcttcttcacccagcaggtgcagcctttcgtcgatatgtcc
ggccggacctggcgggtgcaggcggtgaatggcgtcactccgccgatcagccagggcgcc
ctggcggagttccagcgcgcggagacgatcaagcagctcttcttcgccgccggcgccacg
ccgtccgtgcagttcagcctcagcccgaccgcgctcgatgccggcgcggcgcaggcggtg
ctgcagctgggcgcggtgaatgtctcttacgcccacggcccgcaagtgccgacgatgatc
tcctggcccggtgccgatggcatgcagacggcgcggctgatcatcaccccggtcggcggc
ggcaacccggtggagctggatgcctccggcccctgggcgttgttccatctgttcagccag
ggcacgctggcccaggccggatcgtcggaccagtacacgctcaccttttccgccggcggg
catagtgtgagctacagcatcggcgccaactccgtgctcaaccccttcgcccccggcatg
ctggcggatttccgctgccccagcctgcagggatga
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