Aeribacillus composti: RI196_11740
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Entry
RI196_11740 CDS
T09377
Symbol
hbs
Name
(GenBank) non-specific DNA-binding protein Hbs
KO
K03530
DNA-binding protein HU-beta
Organism
acop
Aeribacillus composti
Brite
KEGG Orthology (KO) [BR:
acop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acop03032
]
RI196_11740 (hbs)
03036 Chromosome and associated proteins [BR:
acop03036
]
RI196_11740 (hbs)
03400 DNA repair and recombination proteins [BR:
acop03400
]
RI196_11740 (hbs)
DNA replication proteins [BR:
acop03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
RI196_11740 (hbs)
Chromosome and associated proteins [BR:
acop03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
RI196_11740 (hbs)
DNA repair and recombination proteins [BR:
acop03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
RI196_11740 (hbs)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
DUF2267
Ribosomal_L12
HU-DNA_bdg
Rpf1_C
HU-CCDC81_euk_1
VWA_3
Motif
Other DBs
NCBI-ProteinID:
WNF31960
LinkDB
All DBs
Position
complement(2421695..2421973)
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AA seq
92 aa
AA seq
DB search
MNKTELINAVAEASELSKKDATKAVDAVFDTILESLKKGDKVQLIGFGNFEVRERSARKG
RNPQTGEEIEIPASKVPAFKPGKALKDAVAGK
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaacagaattaatcaacgctgtagcagaagctagcgaattatccaaaaaggat
gcaacgaaagctgtagatgctgttttcgatacaattttagaatctttgaaaaaaggtgac
aaagttcaactcatcggttttggaaactttgaagtgcgtgagcgttcagcgcgcaaaggt
cgcaatcctcaaactggtgaagaaattgaaattccggcaagcaaagtgcctgcgtttaaa
ccaggcaaagctcttaaagatgcagttgctggcaagtaa
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