Actinomyces sp. oral taxon 414: AM609_05945
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Entry
AM609_05945 CDS
T04083
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
acq
Actinomyces sp. oral taxon 414
Pathway
acq03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
acq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AM609_05945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acq03400
]
AM609_05945
DNA repair and recombination proteins [BR:
acq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AM609_05945
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AM609_05945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
nSTAND1
AAA_21
RsgA_GTPase
AAA_16
DnaJ_CXXCXGXG
AAA_22
APS_kinase
BCA_ABC_TP_C
Viral_helicase1
ScfRs
DUF463
Motif
Other DBs
NCBI-ProteinID:
ALC99136
UniProt:
A0A0M3RJH7
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All DBs
Position
1458711..1461557
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AA seq
948 aa
AA seq
DB search
MNDSLIIRGAREHNLKGVNLDLPRNAMIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSS
YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTSRNPRSTVGTVTEVYDYLRLLYARAGVQH
CPVCDAVVSSQTPQQIVDRVRAMDEGTRFQVLAPVVRGRKGEYTELFADLSARGFSRVRV
DGIVHRLGDVPALNKRLKHDIEVVVDRLVVREGIRQRLTDSIETALGLADGLVVIDKVDL
PAEDPDREHRYSEKRACPNEHPLTLDEMEPRTFSFNAPYGACPACTGIGTRLEVDPSLVV
PDEELTLAEGAIAPWAGHQKYFTRQLAALGEELAFDVDTPWRALPDRAKEAILRGKDYEV
QVKYRNRWGRERVYSTGFEGALDYVMRKHDETESEWSKERYEGYMRQVPCPTCRGARLKP
EVLAVRVGDRSIAQLCELPVGEARDFLAGLHLTGQVQRIAGSVLTEIDARLGFLVDVGLD
YLSLARGAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNARLIETLQRLRD
LGNTLIVVEHDEDTIRSADWVVDIGPGAGERGGQVVYAGALPGLLEAADCLTGDYLAGRR
AIEVPAERRRPVKGREVTVVGARENNLKNITVSFPLGVFTAVTGVSGSGKSSLVNSILYQ
VLANRLNRARGVPGRHRTVRGVEDLDKVVHVDQSPIGRTPRSNPATYTGVWDHIRKIFAA
VPESRARGYGPGRFSFNVKGGRCEACKGDGTLRIEMNFLPDVYVPCEACGGARYNRETLE
IRYKGATVADVLDMTIRRAGEFFAATPIIARHLDTLVEVGLGYVRLGQAATTLSGGEAQR
VKLATELQRRSTGRTVYVLDEPTTGLHFEDIRKLLAVLQGLVDKGNTVVVIEHNLDVIAN
ADWVIDLGPEGGRGGGEVVAAGTPEEVAADPASHTGRYLAPLLERSRP
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgactccctcatcatccgcggcgcacgagagcacaacctcaaaggtgtgaacctg
gacctgccgcgcaacgcgatgatcgtcttcaccggcctgtccggctcgggcaagtcctcc
ctcgccttcgacacgatcttcgccgagggccagcgccgctacgtggagtccctgtcctcc
tacgcccgccagttcctgggccagatggacaagcccgacgtcgacttcatcgagggcctg
agcccggcggtgtccatcgaccagaaatccacctcccgcaacccccgctctaccgtgggc
accgtcaccgaggtctacgactacctgcgcctgctctacgcgcgcgccggcgtccagcac
tgccccgtgtgcgacgccgtcgtctcctcccagaccccccagcagatcgtcgaccgggtg
cgcgccatggacgagggcacccgcttccaggtcctggcccccgtcgtgcgcgggcgcaag
ggcgagtacaccgagttgttcgccgacctttccgcccggggcttctcgcgcgtgcgggtc
gacggcatcgtccaccgcctgggggacgtgcccgcgctcaataaaaggctcaagcacgac
atcgaggtcgtcgtcgaccgcctcgtcgtgcgcgagggcatccgccagcgcctgactgac
tccatcgagacggcgctgggcctggccgacgggctcgtcgtcatcgacaaggtggacctg
cccgccgaggaccccgaccgtgagcaccgctactccgagaagcgggcctgccccaacgag
caccccctgaccctggacgagatggagccgcgcactttctccttcaacgccccctacggc
gcctgcccggcgtgcaccggcatcggcacccgcctggaggtcgacccctccctggtcgtc
cccgacgaggagctgaccctggccgagggcgccatcgccccgtgggcgggccaccagaag
tacttcacccggcagctggcggccctgggggaggagctcgccttcgacgtcgacaccccc
tggcgggccctgcctgaccgcgccaaggaggccattctgcgcggcaaggactacgaggtc
caggtcaagtaccgcaaccgctgggggcgcgagcgggtctactccaccggcttcgagggg
gcgctcgactacgtcatgcgcaagcacgacgagaccgagtcggagtggtccaaggagcgc
tacgagggctacatgcgccaggtgccctgcccgacctgccgcggcgcgcgcctcaagccc
gaggtcctggccgtgcgcgtgggggacaggtccatcgcccaactgtgcgagctgcccgtg
ggcgaggcccgcgacttcctggccggcctgcacctgaccggccaggtccagcggatcgcc
ggcagcgtcctgaccgagatcgacgcccgcctgggcttcctcgtcgacgtcggcctggac
tacctgagcctggcccgcggcgccgcgaccctgtcgggcggggaggcccagcgcatccgc
ctggccacccagatcggctcggggctggtcggggtcctctacgtgctcgacgagcccagc
atcgggctgcaccagcgggacaacgcccgcctcatcgagacccttcagcgcctgcgggac
ctgggcaacaccctcattgtcgtcgagcacgacgaggacaccatccgctcggccgactgg
gtcgtcgacatcggcccgggcgccggggagaggggcggacaggtcgtctacgccggcgcc
ctgccgggcctgctcgaggccgccgactgcctgaccggcgactacctggccgggcgccgc
gccatcgaggtgcccgcggagcggcgcaggccggtcaagggccgggaagtcacggtggtc
ggggcccgcgagaacaacctcaagaacatcaccgtctccttccccctgggcgtgttcacg
gccgtcaccggcgtgtccggctcgggcaagtcctcgctggtcaactcgatcctctaccag
gtcctggccaaccggctcaaccgggcccggggcgtgcccgggcggcaccgcacggtgcgg
ggcgtggaggacctggacaaggtcgtgcacgtggaccagtcgcccatcggccgcaccccc
cgctccaacccggccacctacacgggcgtgtgggaccacatccgcaagatcttcgccgcc
gtgcccgagtccagggcgcgcggctacgggccgggccgcttctccttcaacgtcaagggc
gggcgctgcgaggcctgcaagggcgacggcacgctcaggatcgaaatgaacttcctgccc
gacgtctacgtgccctgcgaggcctgcggcggggcccgctacaaccgggagaccctggag
atccgctataagggcgccacggtcgccgacgtgctggacatgaccatccgtcgggccggc
gagttcttcgccgccaccccgatcatcgcccgccacctggacaccctggtggaggtgggc
ctgggctacgtgcggctgggtcaggcggccaccaccctgtcgggcggggaggcacagcgc
gtcaagctggccaccgagctccagcgccgctcgacgggccggaccgtctacgtcctggac
gagccgaccacgggcctgcacttcgaggacatccgcaagctcctggcggtcctccagggc
ctggtcgacaagggcaatacggtggtcgtcatcgagcacaacctcgacgtcatcgccaac
gccgactgggtcatcgacctgggccccgagggcgggcggggcggcggggaggtggtggcc
gccggcaccccggaggaggtggccgccgaccccgcctcccacaccggccggtacctggcc
ccgctgctggagcgctcgcgcccctga
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