KEGG   Actinomyces sp. oral taxon 414: AM609_05945
Entry
AM609_05945       CDS       T04083                                 
Name
(GenBank) excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
acq  Actinomyces sp. oral taxon 414
Pathway
acq03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:acq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    AM609_05945
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:acq03400]
    AM609_05945
DNA repair and recombination proteins [BR:acq03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     AM609_05945
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      AM609_05945
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_29 nSTAND1 AAA_21 RsgA_GTPase AAA_16 DnaJ_CXXCXGXG AAA_22 APS_kinase BCA_ABC_TP_C Viral_helicase1 ScfRs DUF463
Other DBs
NCBI-ProteinID: ALC99136
UniProt: A0A0M3RJH7
LinkDB
Position
1458711..1461557
AA seq 948 aa
MNDSLIIRGAREHNLKGVNLDLPRNAMIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSS
YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTSRNPRSTVGTVTEVYDYLRLLYARAGVQH
CPVCDAVVSSQTPQQIVDRVRAMDEGTRFQVLAPVVRGRKGEYTELFADLSARGFSRVRV
DGIVHRLGDVPALNKRLKHDIEVVVDRLVVREGIRQRLTDSIETALGLADGLVVIDKVDL
PAEDPDREHRYSEKRACPNEHPLTLDEMEPRTFSFNAPYGACPACTGIGTRLEVDPSLVV
PDEELTLAEGAIAPWAGHQKYFTRQLAALGEELAFDVDTPWRALPDRAKEAILRGKDYEV
QVKYRNRWGRERVYSTGFEGALDYVMRKHDETESEWSKERYEGYMRQVPCPTCRGARLKP
EVLAVRVGDRSIAQLCELPVGEARDFLAGLHLTGQVQRIAGSVLTEIDARLGFLVDVGLD
YLSLARGAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNARLIETLQRLRD
LGNTLIVVEHDEDTIRSADWVVDIGPGAGERGGQVVYAGALPGLLEAADCLTGDYLAGRR
AIEVPAERRRPVKGREVTVVGARENNLKNITVSFPLGVFTAVTGVSGSGKSSLVNSILYQ
VLANRLNRARGVPGRHRTVRGVEDLDKVVHVDQSPIGRTPRSNPATYTGVWDHIRKIFAA
VPESRARGYGPGRFSFNVKGGRCEACKGDGTLRIEMNFLPDVYVPCEACGGARYNRETLE
IRYKGATVADVLDMTIRRAGEFFAATPIIARHLDTLVEVGLGYVRLGQAATTLSGGEAQR
VKLATELQRRSTGRTVYVLDEPTTGLHFEDIRKLLAVLQGLVDKGNTVVVIEHNLDVIAN
ADWVIDLGPEGGRGGGEVVAAGTPEEVAADPASHTGRYLAPLLERSRP
NT seq 2847 nt   +upstreamnt  +downstreamnt
gtgaacgactccctcatcatccgcggcgcacgagagcacaacctcaaaggtgtgaacctg
gacctgccgcgcaacgcgatgatcgtcttcaccggcctgtccggctcgggcaagtcctcc
ctcgccttcgacacgatcttcgccgagggccagcgccgctacgtggagtccctgtcctcc
tacgcccgccagttcctgggccagatggacaagcccgacgtcgacttcatcgagggcctg
agcccggcggtgtccatcgaccagaaatccacctcccgcaacccccgctctaccgtgggc
accgtcaccgaggtctacgactacctgcgcctgctctacgcgcgcgccggcgtccagcac
tgccccgtgtgcgacgccgtcgtctcctcccagaccccccagcagatcgtcgaccgggtg
cgcgccatggacgagggcacccgcttccaggtcctggcccccgtcgtgcgcgggcgcaag
ggcgagtacaccgagttgttcgccgacctttccgcccggggcttctcgcgcgtgcgggtc
gacggcatcgtccaccgcctgggggacgtgcccgcgctcaataaaaggctcaagcacgac
atcgaggtcgtcgtcgaccgcctcgtcgtgcgcgagggcatccgccagcgcctgactgac
tccatcgagacggcgctgggcctggccgacgggctcgtcgtcatcgacaaggtggacctg
cccgccgaggaccccgaccgtgagcaccgctactccgagaagcgggcctgccccaacgag
caccccctgaccctggacgagatggagccgcgcactttctccttcaacgccccctacggc
gcctgcccggcgtgcaccggcatcggcacccgcctggaggtcgacccctccctggtcgtc
cccgacgaggagctgaccctggccgagggcgccatcgccccgtgggcgggccaccagaag
tacttcacccggcagctggcggccctgggggaggagctcgccttcgacgtcgacaccccc
tggcgggccctgcctgaccgcgccaaggaggccattctgcgcggcaaggactacgaggtc
caggtcaagtaccgcaaccgctgggggcgcgagcgggtctactccaccggcttcgagggg
gcgctcgactacgtcatgcgcaagcacgacgagaccgagtcggagtggtccaaggagcgc
tacgagggctacatgcgccaggtgccctgcccgacctgccgcggcgcgcgcctcaagccc
gaggtcctggccgtgcgcgtgggggacaggtccatcgcccaactgtgcgagctgcccgtg
ggcgaggcccgcgacttcctggccggcctgcacctgaccggccaggtccagcggatcgcc
ggcagcgtcctgaccgagatcgacgcccgcctgggcttcctcgtcgacgtcggcctggac
tacctgagcctggcccgcggcgccgcgaccctgtcgggcggggaggcccagcgcatccgc
ctggccacccagatcggctcggggctggtcggggtcctctacgtgctcgacgagcccagc
atcgggctgcaccagcgggacaacgcccgcctcatcgagacccttcagcgcctgcgggac
ctgggcaacaccctcattgtcgtcgagcacgacgaggacaccatccgctcggccgactgg
gtcgtcgacatcggcccgggcgccggggagaggggcggacaggtcgtctacgccggcgcc
ctgccgggcctgctcgaggccgccgactgcctgaccggcgactacctggccgggcgccgc
gccatcgaggtgcccgcggagcggcgcaggccggtcaagggccgggaagtcacggtggtc
ggggcccgcgagaacaacctcaagaacatcaccgtctccttccccctgggcgtgttcacg
gccgtcaccggcgtgtccggctcgggcaagtcctcgctggtcaactcgatcctctaccag
gtcctggccaaccggctcaaccgggcccggggcgtgcccgggcggcaccgcacggtgcgg
ggcgtggaggacctggacaaggtcgtgcacgtggaccagtcgcccatcggccgcaccccc
cgctccaacccggccacctacacgggcgtgtgggaccacatccgcaagatcttcgccgcc
gtgcccgagtccagggcgcgcggctacgggccgggccgcttctccttcaacgtcaagggc
gggcgctgcgaggcctgcaagggcgacggcacgctcaggatcgaaatgaacttcctgccc
gacgtctacgtgccctgcgaggcctgcggcggggcccgctacaaccgggagaccctggag
atccgctataagggcgccacggtcgccgacgtgctggacatgaccatccgtcgggccggc
gagttcttcgccgccaccccgatcatcgcccgccacctggacaccctggtggaggtgggc
ctgggctacgtgcggctgggtcaggcggccaccaccctgtcgggcggggaggcacagcgc
gtcaagctggccaccgagctccagcgccgctcgacgggccggaccgtctacgtcctggac
gagccgaccacgggcctgcacttcgaggacatccgcaagctcctggcggtcctccagggc
ctggtcgacaagggcaatacggtggtcgtcatcgagcacaacctcgacgtcatcgccaac
gccgactgggtcatcgacctgggccccgagggcgggcggggcggcggggaggtggtggcc
gccggcaccccggaggaggtggccgccgaccccgcctcccacaccggccggtacctggcc
ccgctgctggagcgctcgcgcccctga

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