Acidovorax sp. RAC01: BSY15_2458
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Entry
BSY15_2458 CDS
T04481
Name
(GenBank) DEAD/DEAH box helicase family protein
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
acra
Acidovorax sp. RAC01
Pathway
acra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BSY15_2458
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acra03019
]
BSY15_2458
03400 DNA repair and recombination proteins [BR:
acra03400
]
BSY15_2458
Enzymes [BR:
acra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BSY15_2458
Messenger RNA biogenesis [BR:
acra03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BSY15_2458
DNA repair and recombination proteins [BR:
acra03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BSY15_2458
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Pribosyltran
AAA_30
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AOG22387
UniProt:
A0A1B3PI04
LinkDB
All DBs
Position
2739839..2741914
Genome browser
AA seq
691 aa
AA seq
DB search
MQYDQARALQLLREGSGNPAATFRDSQEDAIRHLVTGAAGRLLVIQKTGWGKSFVYFIAA
KLIREQGGGPTLLVSPLLALMRDQEMAAERMKVTAKTVNSTNRMNWAEIAEQIEEGKIDV
LMFHPKQLASAEFQASLLARIPNVSMLVVDEAHCISDWGHDFVPEYKLVTRLIAALPPNL
PVLATTATANERVSNDLERILGPDLLVKRGSLNRPSITLQTITFTSDALRLAWLAKTVHS
LPGSGIIYALTKAHVQYIVSWLTHCGLSVKGYTSDSEDRAVLEQELKENKVKALVATSAL
GMGYDKPDLTFVINYQPPSSVVHYYQQVGRAGRAIPDARGIVLAVKNQLDINTYFIESAF
PKPDEVTAVMKALDAAGDEGLSVPGLQETINLSKGRIEKTLTALAIESPAPIVKDGSAWK
ATGSILAKSFWETAERVTELRRAEHAQMREYMALTEGHMRFLVSALDGDPTTVEAPRSPP
LPTEVDPALVAEADRYMRDTSLPIKARKKWPDGGLDGYGLRGNIAEKLRARDGVALSMYG
TAGWGDIVRDARYEHAHFGDDLVKACAGLVRRAGFEPAPKWVTCIPSLNNPDLVPSFAKR
LASELGLPFHAALTKVKHTSAQKSMHNSSQQARNLDQSLEFSDFDGKVGPVLLVDDIVNS
GWTFTIGAWLLRSNGCGEVWPLALAKTGNEE
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgcaatacgaccaagctcgcgccctacagctgctccgagaaggcagtggcaatcctgcc
gccaccttccgcgactcgcaggaagatgcgattcgtcacctggtcacgggcgcggcgggg
cgcctactcgtcattcagaagacgggctggggcaagagcttcgtttacttcatcgcggca
aaactcattcgtgaacagggaggggggccaaccctcctggtgtcgcccctgctcgcgctg
atgcgggaccaggagatggcggccgagcgcatgaaggtgaccgccaagacggtcaactcg
accaatcggatgaattgggccgagatcgccgaacagatcgaggaagggaagatcgacgtc
ctcatgttccacccgaagcaactggcgagcgcagagttccaggccagccttctggcgagg
attcccaacgtgtcgatgctcgtcgtcgacgaggcccactgcatttcggactgggggcat
gacttcgtgcccgagtacaagcttgtcacgcggctcattgcagcgctgcctcccaacttg
ccggtgcttgcgaccacggccacggcaaacgaacgtgtgtcgaacgatctcgagcgaatc
cttggtccggacctgctagtgaaacgcggatcgctgaatcgcccgtcaatcacactgcag
acgatcacgtttacgagcgacgcactgaggctcgcctggctcgcaaaaaccgtccattcg
ctgcccggcagcggcatcatctatgccctgacgaaggctcacgtgcagtacatcgtcagt
tggctcacgcactgcggcctttcggtcaagggttatacaagtgattcagaggatcgcgct
gttctcgagcaggagctcaaggagaacaaggtcaaggcgcttgtcgcaacctcggcactt
ggcatgggctatgacaagccggacctgacctttgtcatcaactaccagccgccgtcctcg
gtcgtccactactaccagcaggtggggcgtgcggggcgtgcgatcccagatgctcgcggg
atcgtgctggcggtcaagaaccagcttgacatcaacacctacttcatcgagagcgctttt
ccgaaaccggacgaggtgaccgcggtcatgaaggcgctcgatgcggcgggggacgaaggc
ctttccgtaccgggccttcaggagactatcaacttgagcaaggggcgaatcgaaaaaacg
ctgaccgcccttgccatcgagagcccggcaccgatcgtgaaggacggctcagcctggaaa
gccactggcagtattctggcgaagagcttctgggagacggctgagagggtgaccgaactg
cgacgggccgagcacgctcagatgagggagtacatggccctcactgagggacacatgagg
ttcttggtctcggctctcgatggcgacccgacgaccgttgaggcgccgcgcagtccaccg
ttgcccacggaggtcgatccagcgctcgttgctgaggcggatcggtacatgagggacacc
agcttgccgatcaaggcgcgcaagaagtggcctgacggaggattggacggatacggtctg
cgcggaaacatcgctgagaagttgcgcgcgagggacggtgtcgcgctctctatgtacggt
acggctgggtggggcgacatcgtccgtgatgctcgctacgaacacgcgcacttcggcgac
gacctagtgaaggcctgcgccgggctggtgcgccgggcaggttttgaaccagctcctaaa
tgggttacctgcattccgtcactaaacaatcctgatctcgtcccgagctttgctaagcgg
cttgcctctgagcttggcctgccgttccacgcggcgctgaccaaggtgaagcacacctca
gctcagaagtccatgcacaatagctctcaacaggcgaggaacctggatcagtcgcttgaa
ttcagtgactttgacggcaaggtcggtccagtgttgttggtcgacgatatcgtgaactcg
ggttggacatttacgatcggcgcttggctgctgcgctccaacggttgcggcgaagtgtgg
cctctcgcgcttgccaaaactggaaatgaagaatga
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