Anolis carolinensis (green anole): 100558254
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Entry
100558254 CDS
T01608
Symbol
tarbp1
Name
(RefSeq) TAR (HIV-1) RNA binding protein 1
KO
K15333
tRNA guanosine-2'-O-methyltransferase [EC:
2.1.1.34
]
Organism
acs
Anolis carolinensis (green anole)
Brite
KEGG Orthology (KO) [BR:
acs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
acs03016
]
100558254 (tarbp1)
03036 Chromosome and associated proteins [BR:
acs03036
]
100558254 (tarbp1)
Enzymes [BR:
acs01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.34 tRNA (guanosine18-2'-O)-methyltransferase
100558254 (tarbp1)
Transfer RNA biogenesis [BR:
acs03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
100558254 (tarbp1)
Chromosome and associated proteins [BR:
acs03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
100558254 (tarbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
Motif
Other DBs
NCBI-GeneID:
100558254
NCBI-ProteinID:
XP_008122376
Ensembl:
ENSACAG00000001142
UniProt:
G1K946
LinkDB
All DBs
Position
1:220109689..220138253
Genome browser
AA seq
1582 aa
AA seq
DB search
METVLAEALLSQCVEPGALVTAVCGPGGSLSAEQAEALRFLLELREGEGIAREARCAVAF
RRCSAMTVARKPPRRRAGGWCVPRAGPSGAAVYLCGAPLTERLAREALTAGARGGERRRV
EAAVEVLSAVAASLEEPALLREVVETALGLLWGHEDEWDATRVAGRLLAALGRNTAALGL
VWEGLMQPPPPPLPEAPQRARRALLALSALADALLPKDGAGAAPGLDARRCRRFWEAVQE
GLVARDALDRKRARYLLKCAVDASRQGRLGDCHGGQEPEESGPYLFWWCTGKNDQLTQFW
EDYILILEILEGNQIHVMKPVLPKLNSLYEHALSEQKDCWVFHPSWHMCIYKRMFESENK
TLAKEGVVHFLEIWQTKCLPTSPGFSEFVIGPLMDALSESSLYSRSPGQNIGTCPPLGLK
LQAFLATFFTNLPAEEKRTFLLKFIQKMSNRHWCAVPILFFSMALAHIPPYRALDVAGLL
ALRDVLQCTMITHQILLRGTAQCYLLQAAIHLIDIEMVSLSDISNLIVCLRPEESLSRGT
ILWRKLCDWLYVNDMHFRKPLNCNVPPDKTRLSVHVQFLLEDYLKTPMASLSENCLLPDW
SDAKLIAVMILLAADVEDMKNEYRGNVKTEWVELKSLLNPLLDVLLKLGTNPYISTQKSD
RSLQLLLKLLQTCSRKLSTVQVDGITTFLQTTFMSATESILHFFLRRLTAHELNTISDLQ
RCDLYLGVLLEIASFSSVSGWKKGPFVCSFISSLINASLCNLQEMCDEKDIQLGKQIQKA
VSIASLSKVCEIIDQKPDLQLQFLPSVDALKTAISCTQLDYVLKKPSCMEKSSSPEEPAS
HQGWGKIVARFIHDQWACLNFVLNNQSFSKEQNMEHFLHNDENCIQTLQTALEAMTVLPS
DHVLPVFHCMKILVPKLLESLESVCIQAFDLAWKIIFSLSNTQLIFWPNLKAFVQFVFDP
QVLAVAAKNESQAYTKIKEIMFQIIEMSSTRTGVFNVLLSYCCHSWLFPTPSDTIAAENA
FSNANNYSELLIEACLFGTVFRRDQRLIQEVSAFVENLGDECAANVVTESMNRDDHYVRI
CAIKFLCLLDESNTLHKEFIEDIVMKLLDKGEFMLKSKSHYYVNSLQHRIINRLWQTLLV
LFPKLHKDILTNIVDRILQAGHRNNQASVKYLIEWNIILILHKFPQFLQKFWDCFNYGED
QLKTSICTFLAVLSHFDIILQNAAEKIPALKKALVVVLQWCFHHNFSVRLYALIALKKIW
GMCKASFVNDFEALAPVIECSLNQAESMHGSGNAKRNWQRIQKHFFFDNFHPLKDYCLET
IFFTLPRLSEIAEEEWISLSKFKAFTDLPLSSTFPCSHSCTALLDLKPSNWCQQDRGLNS
SKSSNEREWTDVQKKIIPWKDSIPDVDLELVFQDRATKLCKSNSKLIVVASLLDKPTNLG
GLCRTCEIFGVSALIVGSIHYIHDKQFQYLSVSAEQWLSLLEVKPFQLADYLEQKKIEGY
TIIGVEQTAKSCDLTEYSFPEKSLLLLGNEHEGIPANLIQQLDTCVEIPQQGVIRSLNVH
VSGALLIWEYTRQQIVKEKESR
NT seq
4749 nt
NT seq
+upstream
nt +downstream
nt
atggagacggtgctggccgaagcgctgctctcccaatgcgtggagccaggcgccttggtg
acggcggtgtgcggcccaggcgggtccctgtcggccgagcaggcggaggcgctgcgcttc
ttgctcgagctccgcgaaggggaaggaatagctcgggaggcgcgctgcgccgttgccttc
cggcgctgctcggcgatgacggtggcgaggaagccaccgaggaggagagccggcgggtgg
tgcgtgccgcgggccgggccctccggcgctgcggtttacctctgcggggccccgctgacg
gagcggctggcccgcgaggccctcacggctggggcgcgaggcggggagcgccggcgcgtg
gaggccgccgtggaggtcctgtccgccgtggccgcttcgctggaggagccggcgctgctg
agggaggtcgtggagaccgccctggggcttctgtgggggcacgaggacgagtgggatgcc
actcgggtggccgggaggctcctggcggccttggggaggaacaccgccgcgctgggcctc
gtctgggaagggctgatgcagccgccgccgcccccactcccggaggcccctcagcgggcg
aggcgggccctgctggccctgagcgccctcgccgacgccctgctcccgaaggacggagcc
ggggctgccccaggcctggatgcccgccgctgcaggcgcttctgggaagcggtgcaggag
gggctggtggcccgcgacgccctggacaggaagagggcccgctatctcctgaagtgcgcc
gtggacgcctcccgccaaggccgcctcggggactgccacggaggacaggagccagaggaa
agcggaccatatttgttttggtggtgtactggaaaaaatgatcaacttactcagttttgg
gaagattacattttaattctggaaattctggaaggaaaccagattcatgttatgaagcca
gtattgcctaaattaaatagtttatatgaacatgcactatcagaacaaaaagattgttgg
gtgtttcatccttcatggcacatgtgtatttacaaacggatgtttgagagtgaaaacaaa
acattggcaaaagaaggtgttgttcactttcttgaaatctggcaaacaaaatgtcttccc
acatcaccaggattttcagagtttgttattggcccattaatggatgctctttccgaaagt
tctctttatagcaggtcaccgggtcaaaatataggaacctgtcctccattaggattgaag
cttcaggcattcttggctactttctttacaaacctcccagcagaagaaaaacgtactttt
ttgttaaagttcatacagaagatgagcaatagacactggtgtgctgttcccattttgttt
ttctccatggccttggcccatattccaccatatagagctctggatgttgcaggactctta
gctctgagagatgtcttgcagtgtactatgatcacacatcagattctcctgcgaggaaca
gcccaatgttatctccttcaagcagccatacacttgatagatatagagatggtatccctt
tcagatatttcaaacctcattgtatgtctaagaccagaagaatcattaagcagaggaaca
attttgtggagaaagctttgtgattggttgtatgtaaatgacatgcattttcgaaagcct
ttaaactgtaatgtgcctccagacaaaaccagattgagtgttcatgtgcaatttcttttg
gaagattacctcaaaacacctatggctagtttatcagaaaattgccttctgccagactgg
tctgatgcaaaacttattgctgtaatgattcttctggctgcagatgtggaagatatgaag
aatgaatacaggggcaatgtcaaaacggaatgggttgagttgaagtcccttctaaatccg
ctactagatgtcttgctcaaacttggcactaatccatatatttcaacacaaaaatccgat
agaagcttacagctgctattgaaattgctacagacttgttcaagaaaactttccacagta
caagttgatgggataacaacatttcttcaaacaacatttatgtctgccacagaaagcatt
ctgcatttttttctcagaagacttactgcacatgaattaaacacaatttcagacctgcaa
cgctgtgatttatatctaggagtgttgctggagatagcaagcttctcttcagtcagtggc
tggaagaaaggaccctttgtctgcagctttatctcctctctgataaatgcctcactctgc
aatctgcaggagatgtgtgatgaaaaggatatacaacttggaaaacagattcagaaagca
gtgagcattgcatcactaagcaaagtttgtgaaattattgatcagaagccagatcttcag
cttcagtttctaccatctgttgatgccctaaaaacagccatttcctgtacacagcttgac
tatgtactaaagaagccttcctgtatggaaaaaagcagttctccagaagagcctgcgtct
catcaaggatgggggaaaatagtagcacgatttatacatgaccaatgggcttgtcttaat
tttgttctgaataatcaaagcttttctaaggaacaaaatatggaacattttttgcacaat
gatgaaaattgtatacaaacattacagaccgcactggaagcaatgacagttcttccttct
gatcatgttctacctgtttttcattgcatgaaaatactagttcccaagctcctggaatct
ttagaatctgtgtgtatacaggcttttgatttggcatggaaaataatattttctcttagc
aacacacagttgatattttggcccaatttaaaagcttttgttcagtttgtgtttgatcca
caagttcttgctgttgctgcaaagaatgagagtcaagcatatacaaagataaaagagatc
atgtttcagataatcgaaatgtcttctacaagaactggagtctttaatgtgctgttaagt
tactgctgtcactcttggctatttcctactccttctgacacaattgctgccgaaaatgca
ttttcaaatgccaacaattacagtgagcttctcatagaggcatgtctgtttggaacagtt
ttcagacgtgaccaaagactcattcaggaggtgtctgcttttgtagaaaacctgggtgat
gaatgtgcagcaaatgttgttacagaaagtatgaacagagatgaccattatgtgagaatt
tgtgccatcaaatttctctgcttgctagatgagtcaaatacgctgcacaaggaattcata
gaagacattgtcatgaagttgcttgataaaggtgaattcatgttgaaatcaaaaagtcac
tattatgtgaattctttacaacacagaattataaatcgattgtggcagacattgctggtt
ctatttccaaaactccataaggatattttaacaaacattgtggacaggattctacaagct
ggacataggaataatcaagcatctgtaaaatatttaatagagtggaatatcattttgatt
ctgcacaagtttccccagtttcttcaaaaattctgggattgctttaactatggcgaagac
cagcttaaaactagcatttgcacctttttagcagtgctgtcacattttgacataattctc
caaaatgcagctgaaaagattccagctctgaagaaagcccttgttgttgtcctacagtgg
tgtttccatcacaattttagtgttcgattgtatgctttaatcgctctgaagaaaatttgg
ggaatgtgtaaagcatcatttgtgaatgattttgaagctttagctccagttattgaatgt
agtcttaatcaagcggaaagcatgcatggatcggggaatgctaaaaggaattggcaacgt
atccaaaagcacttcttctttgacaatttccatccacttaaggactactgtcttgagaca
atatttttcaccttgccgcgtctgtcagaaattgctgaggaggagtggatttctctctct
aaatttaaagcgttcacagacctcccattgagctcaacttttccatgttcccattcttgc
actgcacttcttgatctaaagccaagcaactggtgccagcaagataggggtttgaattca
tccaaatcaagtaatgaaagagaatggactgatgttcagaaaaaaattatcccctggaag
gacagtataccagatgttgatctagagcttgtatttcaagatcgggctactaaactttgc
aaatcaaatagtaaactgattgtagtggcttctctccttgataaacccaccaatttagga
ggcttgtgtcgtacatgtgaaatatttggtgtctctgctctaatagttggcagcattcat
tacatacatgacaaacaatttcagtacctcagtgtttctgctgaacaatggctttctctt
cttgaggttaagccatttcagctcgctgattacttggagcagaagaaaattgaaggctat
actataataggtgttgagcaaacagccaagagttgtgatctaacagaatacagctttcca
gagaaatctctgctgctgctcggaaatgaacatgaaggaattcctgcaaacctgattcag
cagttggatacttgcgtggaaattccacaacaaggagttattcgatcacttaatgtccat
gtaagtggagctctgcttatctgggaatatactcggcaacagattgtcaaagagaaagaa
tcaagatga
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integrated database retrieval system
