Actinobaculum sp. 313: DDD63_06605
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Entry
DDD63_06605 CDS
T05430
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
actt
Actinobaculum sp. 313
Pathway
actt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
actt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DDD63_06605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
actt03400
]
DDD63_06605
Enzymes [BR:
actt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DDD63_06605
DNA repair and recombination proteins [BR:
actt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DDD63_06605
RecFOR pathway proteins
DDD63_06605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_16
TIP49
Mg_chelatase
Sigma54_activ_2
DUF815
nSTAND3
AAA_22
AAA_14
RNA_helicase
AAA_3
Zeta_toxin
IstB_IS21
NTPase_1
Resolvase
AAA_33
AAA_18
NB-ARC
MCM
AAA_25
AAA_19
TsaE
NACHT
AAA_24
ABC_tran
AAA_28
DnaB_C
Rad17
Motif
Other DBs
NCBI-ProteinID:
AWE42474
LinkDB
All DBs
Position
complement(1527747..1528772)
Genome browser
AA seq
341 aa
AA seq
DB search
MLEDDGLVNPQAGDSERAAEAALRPHQLAEFVGQEKVRTQLSLVLEAAIGRGKTPDHVLL
AGPPGLGKTTLAMIIANEAGGALRLTSGPAIQHTGDLAAVLSSMQEGDVLFIDEIHRLAR
TAEEMLYLAMEDFRVDVMVGKGPGATSIPLPLPPFTVVGATTRAGLLPAPLRDRFGFTGY
LEYYAEQDLSTIVRRNAVKLNVELTADAAREIASRSRGTPRIANRLLRRVQDWAQVRGTG
ILDLEAARAALDMFEVDKRGLDRLDRGVLEALCKRFGGGPVGLTTLAVSVGEEPETVETV
AEPYLVREGFLVRTPRGRAATALAWSHLGLTPPPLNDTLFG
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgctggaagacgatggcttggtcaatccgcaagctggtgactctgaacgggccgccgaa
gctgcactccgtccgcaccagcttgccgagtttgttgggcaggagaaggtacgcacgcag
ttgtccttggtgttggaggcggccatcggtcggggaaaaacacctgatcacgtcctgctg
gccggtccgcccggcttgggaaagacgacgcttgccatgattatcgccaatgaggcaggt
ggcgcgctgcgcctaacgtcgggcccggcgatacaacatacgggagacttagccgcagtg
ctctcctcgatgcaggagggcgacgtccttttcatcgatgagatacacagactggcccgc
accgctgaagagatgctctacctggccatggaagactttcgtgttgacgtcatggtgggg
aaggggcccggtgctacctcaattccgttaccactgccgccgttcacggttgtgggggcg
acgacgcgggcgggcctcctgcccgctccgctgcgtgaccgtttcggttttaccggatac
ctggagtattacgcggagcaggacttgagcactattgtgcggcgaaacgcggtgaagctg
aacgtggaacttaccgccgacgcagcgcgggagatagcttcccgttcgcgcgggacgccg
cgtatcgccaataggctgctgcggcgtgtgcaggattgggcgcaggttcgcgggacgggc
attctcgatctggaggcggcgcgtgcggcgcttgacatgttcgaggtggacaagcgtgga
ctggaccgtttggaccgtggcgtgctggaggcgttgtgcaagcgtttcggaggagggccg
gtaggactgaccaccttggcggtgtcggttggagaggagcctgaaaccgttgagacagtt
gccgagccctacctggtacgggagggtttcctcgtacgaacaccgcgggggcgggcggcg
acggcgctggcatggagtcatctcgggctaaccccaccgccgctcaacgacacgctgttc
ggatag
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